pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GTPBP2   
Synonyms -
Description GTP binding protein 2
Transcript NM_019096   
Expression
Putative miRNA Targets on GTPBP2
3'UTR of GTPBP2
(miRNA target sites are highlighted)
>GTPBP2|NM_019096|3'UTR
   1 ACCCTTCAGGCAGGGACAGTTCTATTGCTGTCCCTACAATATATAAGGTGACTTCTGGCCATGCTGCCCTGCCATTGGCG
  81 GCTCTGTGTGTTAATAGGCTAGGGAGAGAGGGGTGCTGTCTGCCACTTGCTCCCTGCCAACTTTCTGGAGAGGTGCCAAA
 161 CTTGGTGTGGCCAGGAAAGGGCAGTCCTGAGGGAGAAGACAGGATTCAGGGCAGTGCTCCGAAGCTGTGTGCTCACCTGG
 241 TTGGCTCATCAAACCTGGCAACCCTGTGGCCTGTCTGCCGGAGCTGACTGGATCCACTCATCAATTCTTCGTCCCCACTA
 321 CTAAGACTGGGCATGTTTTGCTGGTGTGGTCTCTGCACTTCAGGAATGGTCACAACAGGGGGTAGCCCTCAAAAGCACTC
 401 CTTTTTCTATACCTCTTCTCAAGGCCATGTAAGTTGCCCATCTCTACCTGGCTGTGGACAAAAGGTTATCTGCTCTTGGC
 481 CATCTGGTGGTGGTGGCGGCCCAGAGTCTGAAGAAATGGCACAGGGACAGTGAATGGTAGTGTTGCCACCCTGTGCTGAG
 561 GCCTGAGGCCTCTTCCTCAGCTTTATCTCCCTTTCCTTCACTCAAGGGCCATTTCCCCAGTCCCTATCTCCCCCATCCCC
 641 TCCCGGCTTATAGGCCCCACAGGTGCTATTTGTTGTGCTGGCCCAGGCGTGGGGCTACCAAGCAAAGGCTTGGCATATAC
 721 CAAAGGCCAGCTGCATGCCCATCAGTCTGGTCTTTTTCCTCTGCGGTCATGTTGGCTTTCATGCTGGATCAAATGTTTTA
 801 CTTTCCCAGACTGGTGGCATCTGAGTTCCCCATCCTACCACTCTCACCCCACTTTCCTGCCCCACCTAAACCCTCGTTTT
 881 AGTAATTTGTAGTGACTGTTCCCTTCCCTCTGTTGCAGGGAACCAGGAGGAAAGGGAAAGATGTTGCCATATTTCCTACT
 961 CTTTAGGCATGGACTCTCCTTTCCCTTTGTTAGTGTCCTGGGTTCCCATGGACTCAGGGATTTGTTGGCTAAGGTTTCTC
1041 TGTGCATATATATATATATACATATGTATATATATTTAAATACACATATATATTGTACAGAATAAAAATGTTTTATTGAA
1121 TACACTGTGCTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGACGAUGUUGGAGGGUCu 5'
            | | ||:| :| ::|||||| 
Target 5' atCAAATGTTTTACTTTCCCAGa 3'
788 - 810 145.00 -17.20
2
miRNA  3' aaGGU-GACGAUGU--UGGAGGGUCu 5'
            |:| || |  ||   ||||||:| 
Target 5' ccCTATCTCCCCCATCCCCTCCCGGc 3'
622 - 647 135.00 -16.10
3
miRNA  3' aagGUGAC-GAUGUUG---GAGGGUCu 5'
             ::||| ||:| ||   ||||| | 
Target 5' gggTGCTGTCTGCCACTTGCTCCCTGc 3'
111 - 137 128.00 -14.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30447773 9 COSMIC
COSN30191774 34 COSMIC
COSM8850855 94 COSMIC
COSN31613732 124 COSMIC
COSN31972375 128 COSMIC
COSM5573192 135 COSMIC
COSN30113250 221 COSMIC
COSN30534896 240 COSMIC
COSN29318627 248 COSMIC
COSN19772105 256 COSMIC
COSN30605908 264 COSMIC
COSN30165686 361 COSMIC
COSN30674029 378 COSMIC
COSN31539800 494 COSMIC
COSN31610025 501 COSMIC
COSN16129624 780 COSMIC
COSN28655593 807 COSMIC
COSN1333406 1027 COSMIC
COSN31594702 1045 COSMIC
COSN510119 1121 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs111345694 2 dbSNP
rs1303083511 3 dbSNP
rs1434418512 9 dbSNP
rs1291727488 11 dbSNP
rs553069348 15 dbSNP
rs769465508 16 dbSNP
rs959097310 24 dbSNP
rs1435041129 33 dbSNP
rs1171007736 34 dbSNP
rs370454824 36 dbSNP
rs780939242 42 dbSNP
rs1191050949 48 dbSNP
rs1306265206 51 dbSNP
rs770725037 55 dbSNP
rs746717945 63 dbSNP
rs777693904 64 dbSNP
rs1485216556 66 dbSNP
rs1344608822 71 dbSNP
rs758257569 72 dbSNP
rs1207176843 74 dbSNP
rs750913331 77 dbSNP
rs773659973 79 dbSNP
rs368369292 80 dbSNP
rs753927549 84 dbSNP
rs1003023092 95 dbSNP
rs530320800 96 dbSNP
rs903379635 98 dbSNP
rs756424611 102 dbSNP
rs750738326 104 dbSNP
rs1427824304 110 dbSNP
rs767972120 110 dbSNP
rs1392356291 113 dbSNP
rs1396328975 114 dbSNP
rs762192061 116 dbSNP
rs774955540 118 dbSNP
rs2169925 119 dbSNP
rs1369183193 122 dbSNP
rs1164455597 124 dbSNP
rs376907976 126 dbSNP
rs1365791689 127 dbSNP
rs1254288044 129 dbSNP
rs879096055 130 dbSNP
rs1184025791 131 dbSNP
rs1008104090 133 dbSNP
rs759063033 135 dbSNP
rs776289285 138 dbSNP
rs1041481944 140 dbSNP
rs767756427 145 dbSNP
rs947160519 145 dbSNP
rs914331277 153 dbSNP
rs113592918 154 dbSNP
rs367888334 155 dbSNP
rs772862962 161 dbSNP
rs1332155724 167 dbSNP
rs1289849289 172 dbSNP
rs1240117502 175 dbSNP
rs565385676 176 dbSNP
rs1327419296 187 dbSNP
rs761936674 194 dbSNP
rs975996846 200 dbSNP
rs762359966 202 dbSNP
rs540681954 205 dbSNP
rs1485517580 207 dbSNP
rs898516833 208 dbSNP
rs778773309 210 dbSNP
rs1414391746 211 dbSNP
rs1159372375 216 dbSNP
rs754914112 220 dbSNP
rs573234232 221 dbSNP
rs1179531540 225 dbSNP
rs1434795369 227 dbSNP
rs1385521541 229 dbSNP
rs1253571138 230 dbSNP
rs749364704 232 dbSNP
rs1466751009 233 dbSNP
rs554655370 236 dbSNP
rs907751187 240 dbSNP
rs984589402 255 dbSNP
rs1343761759 261 dbSNP
rs952762651 272 dbSNP
rs1027083678 279 dbSNP
rs991875700 280 dbSNP
rs1450627251 285 dbSNP
rs774886055 287 dbSNP
rs1036339374 291 dbSNP
rs570363333 300 dbSNP
rs903350246 304 dbSNP
rs1020425909 307 dbSNP
rs1171990439 308 dbSNP
rs1304643186 310 dbSNP
rs1316052603 311 dbSNP
rs1209106221 317 dbSNP
rs1270008817 318 dbSNP
rs1470460383 320 dbSNP
rs937650347 325 dbSNP
rs924981342 333 dbSNP
rs1011759900 335 dbSNP
rs550366581 343 dbSNP
rs1050204665 345 dbSNP
rs1175051782 348 dbSNP
rs979720038 349 dbSNP
rs1406257632 356 dbSNP
rs931623616 357 dbSNP
rs536582200 361 dbSNP
rs1413961981 364 dbSNP
rs1414891773 365 dbSNP
rs1468681695 378 dbSNP
rs1179771035 379 dbSNP
rs1359776311 379 dbSNP
rs1450477309 383 dbSNP
rs966615759 384 dbSNP
rs370057414 389 dbSNP
rs1211792886 392 dbSNP
rs1440255207 396 dbSNP
rs901539931 399 dbSNP
rs1289957638 409 dbSNP
rs1321353962 413 dbSNP
rs1040263734 414 dbSNP
rs940571832 422 dbSNP
rs907801921 429 dbSNP
rs1232021014 434 dbSNP
rs749531849 438 dbSNP
rs556809124 439 dbSNP
rs1254360940 445 dbSNP
rs1479762936 447 dbSNP
rs1286950498 448 dbSNP
rs1426464898 450 dbSNP
rs775764551 454 dbSNP
rs769827721 460 dbSNP
rs996952601 473 dbSNP
rs898454426 476 dbSNP
rs538461815 478 dbSNP
rs919986016 487 dbSNP
rs1309655216 491 dbSNP
rs1343335853 494 dbSNP
rs1315091936 497 dbSNP
rs1016937877 498 dbSNP
rs571069932 508 dbSNP
rs1347032546 519 dbSNP
rs1212333983 521 dbSNP
rs1004207110 522 dbSNP
rs1342463867 528 dbSNP
rs1358707329 529 dbSNP
rs887351487 545 dbSNP
rs76645046 546 dbSNP
rs113493779 547 dbSNP
rs1489977534 556 dbSNP
rs772023317 558 dbSNP
rs950201642 562 dbSNP
rs1402468795 563 dbSNP
rs981444950 565 dbSNP
rs967588281 568 dbSNP
rs568359730 577 dbSNP
rs1430650359 581 dbSNP
rs1170654497 582 dbSNP
rs1363930408 588 dbSNP
rs925065049 589 dbSNP
rs1423844881 607 dbSNP
rs1323935856 610 dbSNP
rs45618540 618 dbSNP
rs1428497850 622 dbSNP
rs754711864 623 dbSNP
rs1269113672 625 dbSNP
rs1365208896 627 dbSNP
rs147343298 628 dbSNP
rs529316405 634 dbSNP
rs995976249 639 dbSNP
rs530455578 644 dbSNP
rs142764161 645 dbSNP
rs1215913636 648 dbSNP
rs1214189718 650 dbSNP
rs1247505847 654 dbSNP
rs749970709 666 dbSNP
rs1465814647 668 dbSNP
rs1293058272 670 dbSNP
rs940372420 671 dbSNP
rs886334070 674 dbSNP
rs1028163442 678 dbSNP
rs975861782 682 dbSNP
rs138697361 687 dbSNP
rs532754140 688 dbSNP
rs565474403 689 dbSNP
rs1317486226 701 dbSNP
rs1389276960 705 dbSNP
rs1436692160 706 dbSNP
rs916451127 715 dbSNP
rs1226865014 720 dbSNP
rs1056280332 723 dbSNP
rs1381609705 725 dbSNP
rs1245014292 728 dbSNP
rs1285159153 731 dbSNP
rs1378764159 737 dbSNP
rs186614639 745 dbSNP
rs1358839288 756 dbSNP
rs1222409858 764 dbSNP
rs1268123401 765 dbSNP
rs1465720119 781 dbSNP
rs145977915 782 dbSNP
rs752051724 786 dbSNP
rs1442094302 787 dbSNP
rs540769356 792 dbSNP
rs1188431895 796 dbSNP
rs528560193 802 dbSNP
rs764607890 814 dbSNP
rs1158098239 818 dbSNP
rs981412383 824 dbSNP
rs1014472201 828 dbSNP
rs1318522075 830 dbSNP
rs1458701302 832 dbSNP
rs763401938 832 dbSNP
rs561361142 834 dbSNP
rs1055965893 838 dbSNP
rs1394995529 840 dbSNP
rs1400789557 847 dbSNP
rs967392243 850 dbSNP
rs533462398 858 dbSNP
rs903590492 864 dbSNP
rs1043520637 867 dbSNP
rs1403341615 868 dbSNP
rs185104016 869 dbSNP
rs990447103 875 dbSNP
rs1186680261 876 dbSNP
rs1330455098 877 dbSNP
rs1230734644 882 dbSNP
rs1261348149 899 dbSNP
rs1344332785 910 dbSNP
rs945003766 934 dbSNP
rs1340749628 940 dbSNP
rs1245654475 959 dbSNP
rs368845965 962 dbSNP
rs763610780 964 dbSNP
rs1181211183 967 dbSNP
rs193245349 976 dbSNP
rs1252221897 978 dbSNP
rs1050963240 979 dbSNP
rs577156574 979 dbSNP
rs1188542953 980 dbSNP
rs933924354 981 dbSNP
rs11538196 984 dbSNP
rs957767016 988 dbSNP
rs1173789094 997 dbSNP
rs1029122025 999 dbSNP
rs975264523 1000 dbSNP
rs996754504 1005 dbSNP
rs1214999 1017 dbSNP
rs1351417701 1018 dbSNP
rs962890383 1018 dbSNP
rs909950310 1031 dbSNP
rs149521443 1037 dbSNP
rs1234110876 1040 dbSNP
rs577463510 1045 dbSNP
rs982848530 1055 dbSNP
rs75208735 1059 dbSNP
rs1024262928 1061 dbSNP
rs112927783 1061 dbSNP
rs1433681318 1061 dbSNP
rs754933788 1061 dbSNP
rs780878394 1061 dbSNP
rs1035044785 1063 dbSNP
rs1370804581 1063 dbSNP
rs958980583 1063 dbSNP
rs558453647 1065 dbSNP
rs1168777981 1072 dbSNP
rs1363175779 1074 dbSNP
rs1000352772 1075 dbSNP
rs1292121921 1076 dbSNP
rs904709300 1079 dbSNP
rs1387814017 1083 dbSNP
rs1004487498 1094 dbSNP
rs1296925039 1094 dbSNP
rs1227745309 1099 dbSNP
rs1298697874 1102 dbSNP
rs1441677907 1109 dbSNP
rs771127169 1121 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaggugACGAUGUUGGAGGGUCu 5'
                | :|||  ::|||||| 
Target 5' ------UUUUAC--UUUCCCAGa 3'
1 - 15
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000307126.5 | 3UTR | UUUUACUUUCCCAGACUGGUGGCAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
HNSC 0.647 0.28 0.500 0.33 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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