miRTarBase - #MIRT478539


—
pre-miRNA Information
pre-miRNA hsa-mir-660   
Genomic Coordinates chrX: 50013241 - 50013337
Synonyms MIRN660, hsa-mir-660, MIR660
Description Homo sapiens miR-660 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-660-3p
Sequence 52| ACCUCCUGUGUGCAUGGAUUA |72
Evidence Not_experimental
Experiments
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1221699333 1 dbSNP
rs781893004 6 dbSNP
rs180785970 8 dbSNP
rs1272406504 14 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CTNS   
Synonyms CTNS-LSB, PQLC4
Description cystinosin, lysosomal cystine transporter
Transcript NM_004937   
Other Transcripts NM_001031681   
Expression
Putative miRNA Targets on CTNS
3'UTR of CTNS
(miRNA target sites are highlighted)		 
>CTNS|NM_004937|3'UTR
   1 CACCCAGGGACCCAGTGTACCCAGCCTCTGGCCTCGTGCCCTGCTGGGGAAGGCCTCACCCAGCGAAGGCCGGAGAAGCG
  81 GTTGGGCCCTGGCACACAGGGCTGGCTCAGTGTGCGGACAGAGGAGACCACTCTGCTCCTGGGGCCAGAGGCCATTCAAT
 161 AGCCTGCCTTCGTCCGGGCCCCTCCTGGGCCTCCCCGGCCAGGCACGTGGCACCGTCGCCTTGACACCGCCATCTCTTTT
 241 CTTTAAGGCTTCAGGCAGCGCGCACAGGCTCTGGCAGCCGTCTCAGGCAGGACTGGGCACCAAGCTTGCAGCCGAAGGCC
 321 TTGCCCCAAACTACCAGCGTTTCTGCAAGCAGCTTGAAGGGCTGACCTTGCAGCCGGGTGAGCCAAGGGCACTTTGCTGC
 401 CACCGCTGCATTCCCAGAGATCAAGCAGCCCGGTGCCGTGGCCAGTGAACTCAGAGGTGCTGGTGGACGGGCTAGGACTT
 481 TGGGGTTAGGCCATGGGGCTCTTTCTCTGAAGGCCACTTTCCTGACGTACTCTCTGTACATAACTCAGCGTCCGTGACTG
 561 CAGTAACAGCCAGCCCTACCCAGAGTATTTCTGAGCCATGAGGGGCCCACCAGATTGGTTCTGAATTGGATTCATGCCCA
 641 GCGCATTAGCATAGTAACTCCTTTCAGATTTTTTGGAGGGACGTTTGGAAGTGGCTTACTCTCTTCTGCCCTCTCTCCTA
 721 CCTCCACCTTCTCAGATTAGCCCCATCTGAGCACATCCAGCTGCTCCTTACCCAGCATCTGGAGTACAGGACATAGCTCT
 801 CTCCTGCTACCAGTCTGTGCCTTAGAGGTCTGTTAGGCCTGCCAAACGGCGACCAGCTCCCCTGGAGCGAGGGCAGGCCC
 881 CTTCCCTCTCTTTCCCCAGACACCTACTTGAGACTCACCAATTTCTGGCCTGTTCAGGAGCCTCAGATAAGTATTTGTAC
 961 TTGAGACCACCTCACACAATCTGTATGGGCCCAACCCTGATCTCAAACCTCCTTCCCTCTGCCCAAAGCTGTCCTTCCTA
1041 TGGCAGGAGGGGTGGGGGTCCCAGGACGTGCCTCATACATGACTTGAGCTTGTCAGTCCACTGAGTTTCCTTCTACGAGA
1121 TCAACGCGAGGGGCCTGTATCTTGAATTAAAACCTACTCGCTTCCTTTCTGCACTCTGTGTGCTCGATACAGAAGGCAGG
1201 TGTGCTGGCCTTCAGAGCCAGGTGCCCTGCTCCCCTCGTGTAAGGAAGCGCATAAGGTTGTGAAGGTCACTGACCCGAGA
1281 GCGCTGCGTGCTGACCCCACACTTCACTGGGGAGCCCTCTTGGGTAGCGCGAGACGCCTACCCGCCCAGGGCCAGGTCAG
1361 TCTCCCAGGCTCCGTGTCTTCACGGTTACCAGGGCACGCCACTCAATCTGGATGTGAGCCGGGGTGGATGAGGTTCTGAA
1441 GGGCACACCAGCACTGGGAGCGGGGGCAGTGGGGGTCTTATTCTCCAGACGCTTCCTCTATCTAGTTGTAACAAACGTCA
1521 AAGAATGTCAGGTCTTGTTTCTGCAGAGCAGACTTTGGCCTGACGGGGTCCACAGACCTGTTTCACTTGCAACACCCAGT
1601 AAATGTGTTACTGGGTGCCCTACTTTAAAAATCAGAGATTTCAAATGATTGACTTTTCCGGCTGAGTGCGGTGGCTCACG
1681 CCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGATGGATCACCTGACATCAGGAGTTCGAGACCAGCCTAGCCAACATT
1761 GCAAAACCCCATCTCTACTAAAGATACAAAAATTAGCTGGGCATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGTTGG
1841 CTGAGGCAGGAGAATTACTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCGAAGATCACGCCATTGCACTCCAGCCTGGGC
1921 AACAAGAACGAAACTCCATCTCAAAAAAAAAAAAAAATTATTGACTTTTCTTTAAAATCTGATTTGGCAGTGCTAGGTAG
2001 GTCCAGGAGTGCTAACACCTTCCCAGAGGTGGTACGCAGGTAGTCAGGTGCTCTCTGACTCACCCCCATCTGGCCAGATC
2081 ACGGCCCCCAGCAACACGTGGGGTTGTGTCCCTCGCTGGGATACACGGAGTGCCCTTATAGGCAGGGAGTCTTATAGGCA
2161 GGGGTCTCTCCCAGGCACCTCTGGGTGTCCCTACGGCCCCTCCCAGGTGGGAGCTGAGGCTAGGTTGCAAAAAGGAGGTT
2241 GGGAGCAAGTAGGGGCTTCACAGTAACACCCAAGAAAGCACACGCACCCCAGGGTCCCACCCCAGTGCTCCCAGACACTC
2321 CCACAGATGTGGTTCTGGTCAGGCGCAGTGCAGCTGCTGCGGCTCCACCAGCCCCGGGCTTTCAGGCAGGTGGGCCTGGG
2401 AGTAGTTGAGCTTTGTCCCAGAACAGTGGGGGATGGGGCCATCATTAAAACCACAGCTCTGGCCCCAATATCCCACCGCC
2481 ACCCCCACCCCGATATCCCAGCCCATGCCTCAGCAAAGCCCCCTGTGAATTCCAGCATTTTTATTGAGCGCACCACATCG
2561 GGGAGGGGCGGCAGTGGTTTCCACGGTAACCAAAGTAAGGCTTGTGCACTTGCTGAGCTTCCAGATGCGAATTAGTAAAA
2641 GCTAAATTCAAAAGTAGAATGGGCATCTCCAAAGAGTACGATAAAAACATTTTGTATCAAACTTGTGATTAAAAAAATAC
2721 AAAAGTTAAACCCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' auUAG-GUACGUGUGUCCUCCa 5'
            ||: | || || ||||||| 
Target 5' gaATTACTTGAACCCAGGAGGc 3'
 1852 - 1873 159.00 -15.00
2 
miRNA  3' auUAGGUACG-UG-UGUCCUCCa 5'
            :||| | | |: :||||||| 
Target 5' ctGTCCTTCCTATGGCAGGAGGg 3'
 1029 - 1051 151.00 -15.80
3 
miRNA  3' auUAG-GUACGUGU-GUCCUCca 5'
            ||| | || ||| ||||||  
Target 5' ggATCACCTG-ACATCAGGAGtt 3'
 1717 - 1738 138.00 -13.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
322847 17 ClinVar
322848 56 ClinVar
891432 101 ClinVar
322849 130 ClinVar
891684 177 ClinVar
891685 181 ClinVar
891686 207 ClinVar
1199332 260 ClinVar
322850 263 ClinVar
322851 281 ClinVar
257152 301 ClinVar
1049189 314 ClinVar
322852 406 ClinVar
322853 411 ClinVar
322854 422 ClinVar
322855 432 ClinVar
889952 470 ClinVar
322856 528 ClinVar
891510 551 ClinVar
322857 556 ClinVar
322858 573 ClinVar
322859 578 ClinVar
891757 600 ClinVar
322860 628 ClinVar
322861 632 ClinVar
322862 655 ClinVar
889331 658 ClinVar
322863 716 ClinVar
322864 738 ClinVar
322865 739 ClinVar
890013 836 ClinVar
322866 848 ClinVar
322867 852 ClinVar
322868 872 ClinVar
322869 943 ClinVar
891570 984 ClinVar
322870 1025 ClinVar
322871 1025 ClinVar
322872 1026 ClinVar
322873 1031 ClinVar
322874 1033 ClinVar
322875 1046 ClinVar
322876 1046 ClinVar
322877 1054 ClinVar
322878 1117 ClinVar
322879 1118 ClinVar
322880 1126 ClinVar
889385 1129 ClinVar
322881 1153 ClinVar
322882 1166 ClinVar
322883 1174 ClinVar
322884 1175 ClinVar
322885 1177 ClinVar
322886 1207 ClinVar
322887 1250 ClinVar
890074 1251 ClinVar
890075 1332 ClinVar
322888 1337 ClinVar
322889 1367 ClinVar
322890 1384 ClinVar
322891 1398 ClinVar
322892 1441 ClinVar
322893 1473 ClinVar
322894 1502 ClinVar
889438 1503 ClinVar
322895 1579 ClinVar
322896 1596 ClinVar
322897 1634 ClinVar
890123 1660 ClinVar
322898 1666 ClinVar
322899 1670 ClinVar
322900 1681 ClinVar
890704 1709 ClinVar
322901 1867 ClinVar
322902 1875 ClinVar
890705 1890 ClinVar
322903 1900 ClinVar
322904 1943 ClinVar
322905 1943 ClinVar
322906 1943 ClinVar
891950 2013 ClinVar
891951 2021 ClinVar
322907 2037 ClinVar
889511 2060 ClinVar
889512 2083 ClinVar
322908 2116 ClinVar
322909 2120 ClinVar
322910 2128 ClinVar
322911 2133 ClinVar
890173 2140 ClinVar
322912 2196 ClinVar
890755 2244 ClinVar
322913 2307 ClinVar
890756 2378 ClinVar
322914 2383 ClinVar
322915 2478 ClinVar
322916 2493 ClinVar
322917 2528 ClinVar
322918 2547 ClinVar
322919 2551 ClinVar
889571 2569 ClinVar
322920 2570 ClinVar
322921 2585 ClinVar
322922 2594 ClinVar
322923 2629 ClinVar
322924 2663 ClinVar
322925 2718 ClinVar
COSN30447667 3 COSMIC
COSN30447688 4 COSMIC
COSN30106245 14 COSMIC
COSN30552245 61 COSMIC
COSN31581193 65 COSMIC
COSN30117944 66 COSMIC
COSN26972348 69 COSMIC
COSN31500400 79 COSMIC
COSN31610472 100 COSMIC
COSN30502786 101 COSMIC
COSN26972347 102 COSMIC
COSN30529897 109 COSMIC
COSN26972346 117 COSMIC
COSN26972349 117 COSMIC
COSN13715519 139 COSMIC
COSN30109294 141 COSMIC
COSN31510934 142 COSMIC
COSN30545431 154 COSMIC
COSN31564242 159 COSMIC
COSN30100789 173 COSMIC
COSN26972344 175 COSMIC
COSN30131572 178 COSMIC
COSN20078796 190 COSMIC
COSN26972350 197 COSMIC
COSN29541234 212 COSMIC
COSN31588471 215 COSMIC
COSN30154448 218 COSMIC
COSN30140105 219 COSMIC
COSN26972343 228 COSMIC
COSN26972342 229 COSMIC
COSN31492262 229 COSMIC
COSN31492265 230 COSMIC
COSM9064082 259 COSMIC
COSM8553586 260 COSMIC
COSM978281 262 COSMIC
COSM3183240 263 COSMIC
COSM5035628 278 COSMIC
COSM3721369 301 COSMIC
COSM8993409 308 COSMIC
COSM6637663 313 COSMIC
COSM9711652 319 COSMIC
COSM8031467 328 COSMIC
COSM7088791 332 COSMIC
COSM8248981 333 COSMIC
COSM6344515 350 COSMIC
COSM7616585 353 COSMIC
COSM6637664 366 COSMIC
COSN25094619 406 COSMIC
COSN26730544 411 COSMIC
COSN30104781 446 COSMIC
COSN31587747 451 COSMIC
COSN6103185 548 COSMIC
COSN31481261 559 COSMIC
COSN28813348 716 COSMIC
COSN28681534 738 COSMIC
COSN30544193 761 COSMIC
COSN26554877 785 COSMIC
COSN20113267 1034 COSMIC
COSN20113268 1053 COSMIC
COSN32063094 1054 COSMIC
COSN27161796 2703 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs367692229 1 dbSNP
rs1288637018 10 dbSNP
rs757412668 13 dbSNP
rs201198798 17 dbSNP
rs750693760 18 dbSNP
rs1279139434 19 dbSNP
rs1355089358 20 dbSNP
rs758741172 22 dbSNP
rs895251619 23 dbSNP
rs781007812 25 dbSNP
rs949171456 27 dbSNP
rs1323372298 30 dbSNP
rs1315540590 31 dbSNP
rs747960379 32 dbSNP
rs371518570 34 dbSNP
rs777585405 36 dbSNP
rs372088223 37 dbSNP
rs889174914 40 dbSNP
rs1320319959 43 dbSNP
rs770460020 44 dbSNP
rs1384450694 48 dbSNP
rs1157793608 54 dbSNP
rs751680506 56 dbSNP
rs1183421232 62 dbSNP
rs1472080151 65 dbSNP
rs886338252 66 dbSNP
rs1019086115 72 dbSNP
rs1426337434 73 dbSNP
rs903350060 80 dbSNP
rs138168839 81 dbSNP
rs1349016497 82 dbSNP
rs560735690 90 dbSNP
rs1016335477 91 dbSNP
rs1361217532 94 dbSNP
rs898797849 96 dbSNP
rs1442288143 100 dbSNP
rs996245701 104 dbSNP
rs1376130274 116 dbSNP
rs1376821016 116 dbSNP
rs1033252188 118 dbSNP
rs746209035 130 dbSNP
rs1296491859 133 dbSNP
rs1309201411 138 dbSNP
rs1366474790 142 dbSNP
rs1164470313 155 dbSNP
rs1360543581 160 dbSNP
rs202221738 161 dbSNP
rs991540823 164 dbSNP
rs954472477 168 dbSNP
rs1289857833 172 dbSNP
rs981157553 173 dbSNP
rs908338144 175 dbSNP
rs532875024 176 dbSNP
rs200021713 177 dbSNP
rs1269178801 180 dbSNP
rs552754402 181 dbSNP
rs1177875147 190 dbSNP
rs1243684985 196 dbSNP
rs973906074 197 dbSNP
rs745499655 198 dbSNP
rs1317277457 199 dbSNP
rs771666360 200 dbSNP
rs1415400212 202 dbSNP
rs1424902999 204 dbSNP
rs367951710 207 dbSNP
rs760956872 208 dbSNP
rs764591731 212 dbSNP
rs368625442 214 dbSNP
rs372075822 215 dbSNP
rs750569125 216 dbSNP
rs758641448 218 dbSNP
rs766566995 219 dbSNP
rs752479826 223 dbSNP
rs746630817 227 dbSNP
rs755866151 228 dbSNP
rs777728521 229 dbSNP
rs757236875 230 dbSNP
rs1311234175 231 dbSNP
rs778366372 234 dbSNP
rs1238674302 235 dbSNP
rs776692628 237 dbSNP
rs761471459 238 dbSNP
rs371198507 241 dbSNP
rs1442092361 246 dbSNP
rs1258443775 257 dbSNP
rs771746416 260 dbSNP
rs141629138 261 dbSNP
rs548659446 262 dbSNP
rs201647994 263 dbSNP
rs777181587 264 dbSNP
rs762378170 266 dbSNP
rs1046261947 268 dbSNP
rs1256104049 269 dbSNP
rs886308255 280 dbSNP
rs200771636 281 dbSNP
rs1448976515 282 dbSNP
rs773412371 284 dbSNP
rs762956009 285 dbSNP
rs766557304 294 dbSNP
rs751761314 295 dbSNP
rs1312444635 297 dbSNP
rs2873624 301 dbSNP
rs1255624006 304 dbSNP
rs753675896 305 dbSNP
rs1179890100 309 dbSNP
rs1365081249 310 dbSNP
rs1246466331 311 dbSNP
rs146610717 314 dbSNP
rs566382366 315 dbSNP
rs749864965 317 dbSNP
rs1465310795 329 dbSNP
rs112689752 330 dbSNP
rs779704937 332 dbSNP
rs1470625826 334 dbSNP
rs746617587 335 dbSNP
rs1023012866 338 dbSNP
rs376472844 340 dbSNP
rs768393290 349 dbSNP
rs781685644 351 dbSNP
rs748580372 354 dbSNP
rs1431067154 355 dbSNP
rs370020247 357 dbSNP
rs770367204 360 dbSNP
rs773860120 362 dbSNP
rs1319436912 365 dbSNP
rs763049746 366 dbSNP
rs770940417 367 dbSNP
rs774541509 371 dbSNP
rs200217711 375 dbSNP
rs767796994 376 dbSNP
rs372236710 377 dbSNP
rs765115230 381 dbSNP
rs1191822534 384 dbSNP
rs375132293 387 dbSNP
rs1478163467 388 dbSNP
rs1162773535 389 dbSNP
rs1389846585 393 dbSNP
rs758407630 393 dbSNP
rs1403549786 398 dbSNP
rs369499905 401 dbSNP
rs1255456159 402 dbSNP
rs779397726 404 dbSNP
rs575393686 405 dbSNP
rs760273 406 dbSNP
rs767995253 410 dbSNP
rs3826496 411 dbSNP
rs1184063115 412 dbSNP
rs1407446910 421 dbSNP
rs760274 422 dbSNP
rs1464128035 423 dbSNP
rs985392479 423 dbSNP
rs1346541377 430 dbSNP
rs886052868 432 dbSNP
rs1358895808 433 dbSNP
rs1378238539 438 dbSNP
rs557621132 439 dbSNP
rs1040423833 441 dbSNP
rs1338798523 447 dbSNP
rs1255414460 452 dbSNP
rs1180130147 461 dbSNP
rs990802797 463 dbSNP
rs1284050465 469 dbSNP
rs150501484 470 dbSNP
rs1351840734 479 dbSNP
rs970794938 485 dbSNP
rs372454787 490 dbSNP
rs1277848059 492 dbSNP
rs1447297188 496 dbSNP
rs1217763232 497 dbSNP
rs546509173 506 dbSNP
rs375539792 515 dbSNP
rs1298341810 516 dbSNP
rs1418695721 522 dbSNP
rs563082754 527 dbSNP
rs79668190 528 dbSNP
rs1430736415 531 dbSNP
rs773041146 535 dbSNP
rs1037951952 541 dbSNP
rs907491035 545 dbSNP
rs1479181451 550 dbSNP
rs920508760 551 dbSNP
rs931921787 554 dbSNP
rs369523233 555 dbSNP
rs1048646 556 dbSNP
rs1401641942 561 dbSNP
rs1320752192 567 dbSNP
rs1210754345 569 dbSNP
rs890088060 571 dbSNP
rs1356098967 572 dbSNP
rs3826493 573 dbSNP
rs1041444937 576 dbSNP
rs886052869 578 dbSNP
rs953896142 580 dbSNP
rs902946744 581 dbSNP
rs1398868623 583 dbSNP
rs912463029 586 dbSNP
rs965309639 596 dbSNP
rs976054438 598 dbSNP
rs1389727221 600 dbSNP
rs751394876 602 dbSNP
rs924616216 606 dbSNP
rs1032949023 609 dbSNP
rs376651757 614 dbSNP
rs1351382901 615 dbSNP
rs1200850028 623 dbSNP
rs1054541908 627 dbSNP
rs1048647 628 dbSNP
rs1431641027 629 dbSNP
rs1048648 632 dbSNP
rs1044979463 635 dbSNP
rs1222704417 636 dbSNP
rs754132280 639 dbSNP
rs1023900448 643 dbSNP
rs1270609769 644 dbSNP
rs1489598013 649 dbSNP
rs1217415174 655 dbSNP
rs886052870 655 dbSNP
rs1315527249 657 dbSNP
rs970677281 658 dbSNP
rs747725546 659 dbSNP
rs1003092222 668 dbSNP
rs1377541863 668 dbSNP
rs1321297338 674 dbSNP
rs982125773 677 dbSNP
rs1392944856 678 dbSNP
rs570504841 679 dbSNP
rs539496021 683 dbSNP
rs907923156 684 dbSNP
rs139523410 689 dbSNP
rs995615562 693 dbSNP
rs1026721848 694 dbSNP
rs746966462 702 dbSNP
rs1408373189 715 dbSNP
rs1048649 716 dbSNP
rs776429969 722 dbSNP
rs187832109 723 dbSNP
rs1019474501 724 dbSNP
rs1419497012 728 dbSNP
rs1440703846 728 dbSNP
rs1238023792 729 dbSNP
rs200419877 737 dbSNP
rs386794648 737 dbSNP
rs879624973 737 dbSNP
rs222754 738 dbSNP
rs224562 739 dbSNP
rs760319892 743 dbSNP
rs1280085267 748 dbSNP
rs1385141411 753 dbSNP
rs758680738 758 dbSNP
rs1200564429 774 dbSNP
rs931890448 777 dbSNP
rs1050267229 780 dbSNP
rs373151543 783 dbSNP
rs1241970446 797 dbSNP
rs956015413 798 dbSNP
rs1308335796 799 dbSNP
rs1289486954 806 dbSNP
rs944348465 808 dbSNP
rs1444245776 814 dbSNP
rs914641770 815 dbSNP
rs1413988895 816 dbSNP
rs1400252274 822 dbSNP
rs57765820 836 dbSNP
rs1352635542 838 dbSNP
rs980265778 847 dbSNP
rs146131305 848 dbSNP
rs545508356 849 dbSNP
rs768248047 851 dbSNP
rs75192283 852 dbSNP
rs747634953 854 dbSNP
rs1208699515 858 dbSNP
rs1218325661 863 dbSNP
rs1012423490 864 dbSNP
rs1354034284 869 dbSNP
rs1023869498 870 dbSNP
rs886052871 872 dbSNP
rs1180991341 878 dbSNP
rs906796630 879 dbSNP
rs1003532516 884 dbSNP
rs1015361621 886 dbSNP
rs1019422122 886 dbSNP
rs1300164946 891 dbSNP
rs962148508 902 dbSNP
rs1360163707 908 dbSNP
rs1048653 926 dbSNP
rs1184658174 933 dbSNP
rs1157178508 936 dbSNP
rs973926951 938 dbSNP
rs1426965635 939 dbSNP
rs1387288141 940 dbSNP
rs1163187722 942 dbSNP
rs140127855 943 dbSNP
rs1195264972 948 dbSNP
rs1488391361 950 dbSNP
rs1162919391 961 dbSNP
rs1397240793 963 dbSNP
rs1411741437 967 dbSNP
rs1262051181 970 dbSNP
rs1329137941 975 dbSNP
rs1323280090 981 dbSNP
rs953194446 982 dbSNP
rs985942204 987 dbSNP
rs1290401081 988 dbSNP
rs1453079522 996 dbSNP
rs911799318 997 dbSNP
rs192770466 998 dbSNP
rs944650794 999 dbSNP
rs1048669 1003 dbSNP
rs977112805 1013 dbSNP
rs763204835 1016 dbSNP
rs1280125928 1019 dbSNP
rs1219349154 1023 dbSNP
rs386794649 1024 dbSNP
rs886052872 1024 dbSNP
rs1048673 1025 dbSNP
rs1048674 1026 dbSNP
rs1048676 1029 dbSNP
rs1438962788 1030 dbSNP
rs1355863772 1031 dbSNP
rs958216370 1032 dbSNP
rs397831765 1033 dbSNP
rs1196284249 1034 dbSNP
rs1256702283 1035 dbSNP
rs1422314410 1036 dbSNP
rs1457748278 1037 dbSNP
rs1184557335 1046 dbSNP
rs772764926 1046 dbSNP
rs886052873 1048 dbSNP
rs990141487 1048 dbSNP
rs370179817 1049 dbSNP
rs71379527 1049 dbSNP
rs764368153 1050 dbSNP
rs1465611319 1051 dbSNP
rs1022058214 1052 dbSNP
rs1054574102 1052 dbSNP
rs1167749899 1052 dbSNP
rs1190352762 1053 dbSNP
rs375379592 1053 dbSNP
rs1048677 1054 dbSNP
rs71153382 1054 dbSNP
rs746404484 1054 dbSNP
rs368584752 1055 dbSNP
rs1256207400 1056 dbSNP
rs928761379 1057 dbSNP
rs1187029926 1058 dbSNP
rs1379555122 1058 dbSNP
rs1373860417 1060 dbSNP
rs1446654438 1064 dbSNP
rs543640096 1068 dbSNP
rs1295896114 1069 dbSNP
rs1359308978 1071 dbSNP
rs1045286633 1073 dbSNP
rs1432545091 1074 dbSNP
rs1399423735 1083 dbSNP
rs906762625 1085 dbSNP
rs564270467 1087 dbSNP
rs182654337 1091 dbSNP
rs1438968632 1100 dbSNP
rs772836142 1101 dbSNP
rs1183619166 1102 dbSNP
rs1004239679 1111 dbSNP
rs3210228 1114 dbSNP
rs918816794 1116 dbSNP
rs1048682 1117 dbSNP
rs78833685 1118 dbSNP
rs889454229 1120 dbSNP
rs886052874 1126 dbSNP
rs1295844757 1127 dbSNP
rs774374801 1128 dbSNP
rs115643745 1129 dbSNP
rs1379249775 1131 dbSNP
rs1446770653 1144 dbSNP
rs2235104 1153 dbSNP
rs1277062211 1157 dbSNP
rs377370629 1160 dbSNP
rs143758499 1161 dbSNP
rs112915401 1166 dbSNP
rs1018773969 1167 dbSNP
rs1418884606 1172 dbSNP
rs1361927543 1173 dbSNP
rs1166811335 1174 dbSNP
rs1293779085 1174 dbSNP
rs397857879 1174 dbSNP
rs886052875 1175 dbSNP
rs1255514159 1176 dbSNP
rs1264186439 1177 dbSNP
rs1491012488 1177 dbSNP
rs553878990 1177 dbSNP
rs965981930 1178 dbSNP
rs1200303014 1186 dbSNP
rs977709580 1187 dbSNP
rs1321687614 1191 dbSNP
rs1489419969 1198 dbSNP
rs1311337489 1201 dbSNP
rs115239409 1207 dbSNP
rs1001519945 1214 dbSNP
rs1341930390 1220 dbSNP
rs1422953801 1220 dbSNP
rs1480814519 1223 dbSNP
rs1382480334 1233 dbSNP
rs1295107432 1235 dbSNP
rs754009491 1238 dbSNP
rs1375926481 1239 dbSNP
rs1162809239 1245 dbSNP
rs1478846154 1249 dbSNP
rs886052876 1250 dbSNP
rs960133187 1251 dbSNP
rs757406072 1256 dbSNP
rs915650468 1258 dbSNP
rs1386641407 1276 dbSNP
rs948475343 1277 dbSNP
rs952957213 1278 dbSNP
rs1211208389 1280 dbSNP
rs187735704 1283 dbSNP
rs148999895 1284 dbSNP
rs1304039072 1286 dbSNP
rs576629265 1288 dbSNP
rs75151527 1289 dbSNP
rs1040756418 1290 dbSNP
rs372751556 1299 dbSNP
rs1389840456 1302 dbSNP
rs1232958020 1306 dbSNP
rs765616837 1308 dbSNP
rs922320486 1311 dbSNP
rs1401096434 1315 dbSNP
rs1170115071 1316 dbSNP
rs1474527125 1318 dbSNP
rs987066962 1319 dbSNP
rs1489490021 1326 dbSNP
rs377088248 1327 dbSNP
rs939542042 1329 dbSNP
rs1432976867 1330 dbSNP
rs1214657626 1331 dbSNP
rs555688774 1332 dbSNP
rs572284265 1336 dbSNP
rs541263497 1337 dbSNP
rs1194753110 1338 dbSNP
rs898091732 1344 dbSNP
rs534420037 1345 dbSNP
rs1265159480 1349 dbSNP
rs1330283992 1352 dbSNP
rs1049075394 1356 dbSNP
rs1448864154 1362 dbSNP
rs558637146 1367 dbSNP
rs376097559 1374 dbSNP
rs1018994700 1375 dbSNP
rs866082499 1377 dbSNP
rs1404539051 1379 dbSNP
rs886052877 1384 dbSNP
rs998716406 1385 dbSNP
rs1031976681 1391 dbSNP
rs886052878 1398 dbSNP
rs1238112197 1399 dbSNP
rs1365879359 1401 dbSNP
rs1435565263 1405 dbSNP
rs1437966485 1411 dbSNP
rs957338678 1414 dbSNP
rs1200651783 1415 dbSNP
rs1346755231 1419 dbSNP
rs989797021 1421 dbSNP
rs915617600 1422 dbSNP
rs1386659300 1426 dbSNP
rs564208474 1429 dbSNP
rs969785315 1430 dbSNP
rs981152911 1432 dbSNP
rs1440022059 1433 dbSNP
rs1356222061 1434 dbSNP
rs161398 1441 dbSNP
rs939489331 1442 dbSNP
rs756380455 1445 dbSNP
rs1373890659 1447 dbSNP
rs1285563496 1449 dbSNP
rs1420693839 1450 dbSNP
rs747575016 1451 dbSNP
rs919487260 1461 dbSNP
rs1360502408 1462 dbSNP
rs543755899 1463 dbSNP
rs1223826448 1465 dbSNP
rs374355263 1466 dbSNP
rs1049044424 1470 dbSNP
rs1488209262 1472 dbSNP
rs563539494 1473 dbSNP
rs1218435177 1474 dbSNP
rs529326719 1476 dbSNP
rs1025768042 1477 dbSNP
rs192729898 1482 dbSNP
rs1221985986 1483 dbSNP
rs952986132 1487 dbSNP
rs755487833 1490 dbSNP
rs781643412 1491 dbSNP
rs984333209 1492 dbSNP
rs1437581093 1497 dbSNP
rs1300271970 1501 dbSNP
rs886052879 1502 dbSNP
rs377728246 1503 dbSNP
rs548182885 1505 dbSNP
rs1407539275 1509 dbSNP
rs957513850 1517 dbSNP
rs1385445493 1518 dbSNP
rs976383818 1522 dbSNP
rs780439698 1527 dbSNP
rs747724538 1534 dbSNP
rs1195385169 1535 dbSNP
rs568390703 1548 dbSNP
rs1011531903 1551 dbSNP
rs1477972898 1554 dbSNP
rs1241275319 1561 dbSNP
rs1022893266 1565 dbSNP
rs1052610919 1566 dbSNP
rs1290507281 1570 dbSNP
rs1213061628 1571 dbSNP
rs969672217 1576 dbSNP
rs142813435 1579 dbSNP
rs767977334 1590 dbSNP
rs112299490 1596 dbSNP
rs1361565600 1600 dbSNP
rs1268740275 1607 dbSNP
rs151033081 1619 dbSNP
rs961179368 1625 dbSNP
rs1350907805 1627 dbSNP
rs751895514 1627 dbSNP
rs112032534 1634 dbSNP
rs1460393462 1638 dbSNP
rs919468299 1641 dbSNP
rs905080849 1645 dbSNP
rs1380390999 1646 dbSNP
rs939281056 1657 dbSNP
rs1230191126 1658 dbSNP
rs778764728 1660 dbSNP
rs1049264377 1661 dbSNP
rs910823423 1665 dbSNP
rs112317698 1666 dbSNP
rs1199374088 1668 dbSNP
rs183813073 1669 dbSNP
rs117079843 1670 dbSNP
rs901905337 1671 dbSNP
rs1368736146 1672 dbSNP
rs934801298 1673 dbSNP
rs1179686179 1680 dbSNP
rs572393960 1681 dbSNP
rs892933810 1683 dbSNP
rs1428580856 1688 dbSNP
rs535462240 1691 dbSNP
rs867189674 1709 dbSNP
rs1442301400 1710 dbSNP
rs1353483490 1713 dbSNP
rs1022863506 1715 dbSNP
rs964252918 1716 dbSNP
rs905809068 1740 dbSNP
rs541979906 1741 dbSNP
rs1403046713 1745 dbSNP
rs187530341 1746 dbSNP
rs555625298 1752 dbSNP
rs1331282846 1755 dbSNP
rs1029958253 1760 dbSNP
rs1179261707 1768 dbSNP
rs1360049407 1770 dbSNP
rs1231310557 1780 dbSNP
rs956350938 1781 dbSNP
rs772982953 1782 dbSNP
rs987853549 1793 dbSNP
rs1280016920 1801 dbSNP
rs1450639488 1811 dbSNP
rs141007377 1812 dbSNP
rs946501710 1813 dbSNP
rs980980362 1814 dbSNP
rs1371952860 1818 dbSNP
rs1378789475 1822 dbSNP
rs1219298521 1823 dbSNP
rs1375703079 1825 dbSNP
rs1280217157 1829 dbSNP
rs1432634931 1837 dbSNP
rs1159729725 1848 dbSNP
rs1418485463 1866 dbSNP
rs111430685 1867 dbSNP
rs939229043 1873 dbSNP
rs1056304513 1874 dbSNP
rs886052880 1875 dbSNP
rs1489466507 1878 dbSNP
rs1027152915 1879 dbSNP
rs897776841 1882 dbSNP
rs1238921760 1886 dbSNP
rs557935819 1890 dbSNP
rs558409648 1891 dbSNP
rs543539440 1897 dbSNP
rs1207833469 1899 dbSNP
rs563849197 1900 dbSNP
rs1292289758 1904 dbSNP
rs888497801 1916 dbSNP
rs1289274419 1922 dbSNP
rs1005640561 1924 dbSNP
rs1343391624 1925 dbSNP
rs576365960 1926 dbSNP
rs1420775348 1930 dbSNP
rs910790603 1931 dbSNP
rs1186045788 1935 dbSNP
rs1478947376 1938 dbSNP
rs899998869 1941 dbSNP
rs753171085 1942 dbSNP
rs764705405 1942 dbSNP
rs1212517264 1943 dbSNP
rs1267762896 1943 dbSNP
rs1295972878 1943 dbSNP
rs1342027020 1943 dbSNP
rs1481996671 1943 dbSNP
rs1491205481 1943 dbSNP
rs397856854 1943 dbSNP
rs886052881 1943 dbSNP
rs886052882 1943 dbSNP
rs1477216271 1944 dbSNP
rs998387877 1945 dbSNP
rs1359682417 1955 dbSNP
rs1295199991 1958 dbSNP
rs192068377 1960 dbSNP
rs867365108 1962 dbSNP
rs541156683 1970 dbSNP
rs1332660388 1971 dbSNP
rs1358766378 1987 dbSNP
rs1467331636 1991 dbSNP
rs1400791977 1997 dbSNP
rs988185568 2004 dbSNP
rs775551124 2005 dbSNP
rs1021969868 2009 dbSNP
rs138871128 2013 dbSNP
rs543577418 2021 dbSNP
rs561928672 2022 dbSNP
rs1053167746 2033 dbSNP
rs1347104138 2034 dbSNP
rs576881909 2036 dbSNP
rs184828971 2037 dbSNP
rs1044276201 2041 dbSNP
rs190305913 2044 dbSNP
rs1303184067 2051 dbSNP
rs1305526061 2051 dbSNP
rs1441495015 2064 dbSNP
rs1201480333 2067 dbSNP
rs1218265672 2068 dbSNP
rs1397388046 2073 dbSNP
rs905777944 2075 dbSNP
rs182280281 2083 dbSNP
rs533200063 2084 dbSNP
rs1199587831 2089 dbSNP
rs1454184288 2091 dbSNP
rs1247773195 2093 dbSNP
rs561967545 2098 dbSNP
rs896779952 2099 dbSNP
rs1250671888 2100 dbSNP
rs1194841651 2101 dbSNP
rs1479470631 2103 dbSNP
rs994258186 2104 dbSNP
rs1026707220 2115 dbSNP
rs77196744 2116 dbSNP
rs1242300292 2118 dbSNP
rs1160680508 2119 dbSNP
rs80249487 2120 dbSNP
rs899946522 2121 dbSNP
rs1017767786 2125 dbSNP
rs1313810772 2127 dbSNP
rs72835828 2128 dbSNP
rs867199073 2131 dbSNP
rs74485511 2133 dbSNP
rs754035926 2135 dbSNP
rs892688361 2135 dbSNP
rs1023011232 2136 dbSNP
rs1180495360 2140 dbSNP
rs923519501 2145 dbSNP
rs1434149903 2151 dbSNP
rs985624532 2152 dbSNP
rs1002308994 2157 dbSNP
rs1206791234 2160 dbSNP
rs1236994854 2165 dbSNP
rs1351352821 2165 dbSNP
rs915493007 2166 dbSNP
rs1294136631 2168 dbSNP
rs1274198236 2169 dbSNP
rs1373990257 2177 dbSNP
rs1300463160 2182 dbSNP
rs934653488 2185 dbSNP
rs565989522 2190 dbSNP
rs914642836 2195 dbSNP
rs886052883 2196 dbSNP
rs947494343 2199 dbSNP
rs1044244725 2201 dbSNP
rs927080366 2210 dbSNP
rs938517111 2215 dbSNP
rs1255090709 2228 dbSNP
rs763040500 2232 dbSNP
rs1447455276 2237 dbSNP
rs374244012 2241 dbSNP
rs897077378 2244 dbSNP
rs1203393040 2254 dbSNP
rs534998566 2256 dbSNP
rs1273931643 2263 dbSNP
rs558068545 2266 dbSNP
rs984721551 2270 dbSNP
rs909154420 2276 dbSNP
rs941358064 2278 dbSNP
rs993836240 2284 dbSNP
rs1326278015 2285 dbSNP
rs1316830117 2286 dbSNP
rs1048557877 2287 dbSNP
rs888193156 2288 dbSNP
rs1006629074 2290 dbSNP
rs1039750370 2299 dbSNP
rs141342020 2302 dbSNP
rs161397 2307 dbSNP
rs1378670378 2308 dbSNP
rs1475618506 2311 dbSNP
rs1241367703 2318 dbSNP
rs1419286439 2319 dbSNP
rs1164074461 2326 dbSNP
rs1253646686 2327 dbSNP
rs1051227272 2328 dbSNP
rs1392902123 2338 dbSNP
rs1332862325 2342 dbSNP
rs557157626 2345 dbSNP
rs998109973 2346 dbSNP
rs1401013591 2348 dbSNP
rs1339114544 2350 dbSNP
rs146970819 2359 dbSNP
rs956517235 2362 dbSNP
rs529210698 2363 dbSNP
rs1372391937 2370 dbSNP
rs988826725 2376 dbSNP
rs866713410 2377 dbSNP
rs543014932 2378 dbSNP
rs1410236224 2379 dbSNP
rs1307915066 2383 dbSNP
rs397702352 2384 dbSNP
rs1285605227 2390 dbSNP
rs1001856384 2391 dbSNP
rs1395628735 2394 dbSNP
rs1033317900 2401 dbSNP
rs1467191831 2403 dbSNP
rs184380136 2404 dbSNP
rs927380896 2409 dbSNP
rs1458640792 2418 dbSNP
rs1013290010 2428 dbSNP
rs1271271906 2430 dbSNP
rs1236960340 2433 dbSNP
rs1026057258 2435 dbSNP
rs1303291883 2439 dbSNP
rs1232822148 2446 dbSNP
rs572329082 2448 dbSNP
rs1364832498 2457 dbSNP
rs1057387523 2458 dbSNP
rs1428286498 2459 dbSNP
rs918491325 2461 dbSNP
rs1236680054 2464 dbSNP
rs541330319 2469 dbSNP
rs1188430460 2470 dbSNP
rs781672689 2478 dbSNP
rs888079640 2479 dbSNP
rs1172902668 2482 dbSNP
rs1431417193 2484 dbSNP
rs564434177 2491 dbSNP
rs1471843051 2492 dbSNP
rs886052884 2493 dbSNP
rs1469757325 2498 dbSNP
rs1400905333 2522 dbSNP
rs1467079773 2523 dbSNP
rs909113334 2524 dbSNP
rs1486199251 2525 dbSNP
rs886052885 2528 dbSNP
rs1209322069 2533 dbSNP
rs1396394786 2536 dbSNP
rs1006511932 2545 dbSNP
rs1128109 2547 dbSNP
rs900930401 2550 dbSNP
rs1128098 2551 dbSNP
rs1286066628 2552 dbSNP
rs1030957994 2557 dbSNP
rs563211649 2560 dbSNP
rs1312074786 2561 dbSNP
rs1220940453 2562 dbSNP
rs1256724099 2563 dbSNP
rs748805722 2564 dbSNP
rs770525743 2569 dbSNP
rs7093 2570 dbSNP
rs1258503384 2571 dbSNP
rs1044824 2576 dbSNP
rs1021890470 2577 dbSNP
rs968683626 2580 dbSNP
rs548531950 2585 dbSNP
rs927349890 2586 dbSNP
rs1478849602 2593 dbSNP
rs549150113 2594 dbSNP
rs1044811 2606 dbSNP
rs904073795 2607 dbSNP
rs938271413 2609 dbSNP
rs1265750666 2610 dbSNP
rs565329659 2611 dbSNP
rs1234693199 2614 dbSNP
rs771938992 2615 dbSNP
rs1372494114 2623 dbSNP
rs1044809 2625 dbSNP
rs886052886 2629 dbSNP
rs775575548 2630 dbSNP
rs1395042665 2643 dbSNP
rs929834075 2648 dbSNP
rs1341765672 2649 dbSNP
rs1013238286 2657 dbSNP
rs1044804 2658 dbSNP
rs534360650 2663 dbSNP
rs1167214021 2671 dbSNP
rs909818969 2671 dbSNP
rs1307470003 2678 dbSNP
rs1234378600 2679 dbSNP
rs1417434522 2680 dbSNP
rs942340018 2681 dbSNP
rs551633303 2685 dbSNP
rs900900699 2689 dbSNP
rs543695304 2690 dbSNP
rs1210366583 2697 dbSNP
rs1006028541 2709 dbSNP
rs1016519014 2711 dbSNP
rs933771077 2716 dbSNP
rs567476347 2718 dbSNP
rs1215023436 2725 dbSNP
rs1335011275 2733 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' auuagguacgUGUGUCCUCca 5'
                    | :||||||  
Target 5' ----------AGGCAGGAGaa 3'
 		1 - 11
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000046640.3 | 3UTR | AGGCAGGAGAAUUACUUGAACCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
348 hsa-miR-660-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059151 TXNIP thioredoxin interacting protein 2 2
MIRT294324 ZNF264 zinc finger protein 264 2 2
MIRT306043 SKIL SKI like proto-oncogene 2 4
MIRT392841 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT444084 C12orf73 chromosome 12 open reading frame 73 2 2
MIRT458774 CES2 carboxylesterase 2 2 2
MIRT460273 SLC26A2 solute carrier family 26 member 2 2 2
MIRT462675 HMOX1 heme oxygenase 1 2 4
MIRT473711 MAPK1 mitogen-activated protein kinase 1 2 6
MIRT478539 CTNS cystinosin, lysosomal cystine transporter 2 2
MIRT483234 FAM13C family with sequence similarity 13 member C 2 4
MIRT486255 BCORL1 BCL6 corepressor like 1 2 2
MIRT501951 MAT2A methionine adenosyltransferase 2A 2 10
MIRT513043 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT513249 FBXO17 F-box protein 17 2 2
MIRT526940 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT528176 C6orf47 chromosome 6 open reading frame 47 2 2
MIRT531525 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT532746 CMTM6 CKLF like MARVEL transmembrane domain containing 6 2 2
MIRT534241 SLC23A1 solute carrier family 23 member 1 2 2
MIRT538198 DBN1 drebrin 1 2 2
MIRT539305 AMOTL1 angiomotin like 1 2 2
MIRT539567 CNKSR3 CNKSR family member 3 2 4
MIRT540043 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540232 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT540251 RGS17 regulator of G protein signaling 17 2 2
MIRT540878 ZBTB24 zinc finger and BTB domain containing 24 2 2
MIRT543484 RXRA retinoid X receptor alpha 2 2
MIRT551435 F2 coagulation factor II, thrombin 2 2
MIRT553925 STK11IP serine/threonine kinase 11 interacting protein 2 2
MIRT556312 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556943 ING1 inhibitor of growth family member 1 2 2
MIRT569883 EFEMP2 EGF containing fibulin like extracellular matrix protein 2 2 2
MIRT571849 NRBF2 nuclear receptor binding factor 2 2 2
MIRT572420 VWA5A von Willebrand factor A domain containing 5A 2 2
MIRT572495 BTN2A2 butyrophilin subfamily 2 member A2 2 2
MIRT572564 AFF1 AF4/FMR2 family member 1 2 2
MIRT572883 CHST15 carbohydrate sulfotransferase 15 2 2
MIRT574988 Slc38a5 solute carrier family 38, member 5 2 4
MIRT575264 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT608476 RRP36 ribosomal RNA processing 36 2 4
MIRT608529 TMOD3 tropomodulin 3 2 2
MIRT608578 RNF149 ring finger protein 149 2 2
MIRT608615 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT608679 STPG1 sperm tail PG-rich repeat containing 1 2 2
MIRT608727 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT609575 CATSPER4 cation channel sperm associated 4 2 2
MIRT609710 TMEM132C transmembrane protein 132C 2 2
MIRT609858 DAZAP2 DAZ associated protein 2 2 2
MIRT610262 LRRC47 leucine rich repeat containing 47 2 2
MIRT610349 AGTRAP angiotensin II receptor associated protein 2 2
MIRT610729 PEA15 phosphoprotein enriched in astrocytes 15 2 4
MIRT610803 KLK2 kallikrein related peptidase 2 2 2
MIRT610968 MAFK MAF bZIP transcription factor K 2 2
MIRT611117 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 2
MIRT611600 JAKMIP3 Janus kinase and microtubule interacting protein 3 2 4
MIRT612211 TMEM109 transmembrane protein 109 2 2
MIRT612248 MICALL1 MICAL like 1 2 2
MIRT613252 CAV1 caveolin 1 2 4
MIRT613323 ARID3A AT-rich interaction domain 3A 2 4
MIRT613514 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT613605 TP53 tumor protein p53 2 2
MIRT613632 ARHGAP35 Rho GTPase activating protein 35 2 2
MIRT613809 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT614835 PRKCA protein kinase C alpha 2 2
MIRT614985 GIPC1 GIPC PDZ domain containing family member 1 2 2
MIRT615320 MLXIPL MLX interacting protein like 2 2
MIRT615504 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT615529 SPANXN5 SPANX family member N5 2 2
MIRT615610 SPANXN1 SPANX family member N1 2 2
MIRT615755 C6 complement C6 2 2
MIRT615952 SORD sorbitol dehydrogenase 2 2
MIRT616284 HMGB1 high mobility group box 1 2 2
MIRT616626 KCNJ11 potassium voltage-gated channel subfamily J member 11 2 4
MIRT616882 DGCR14 ess-2 splicing factor homolog 2 2
MIRT616994 COL19A1 collagen type XIX alpha 1 chain 2 2
MIRT617080 SPIB Spi-B transcription factor 2 2
MIRT617345 ZSCAN2 zinc finger and SCAN domain containing 2 2 2
MIRT617712 RUSC2 RUN and SH3 domain containing 2 2 2
MIRT618102 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT618493 DENND5B DENN domain containing 5B 2 4
MIRT618756 SLC38A5 solute carrier family 38 member 5 2 5
MIRT619928 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT620028 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620087 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 2
MIRT620209 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT620557 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620770 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620784 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT620895 ANO7 anoctamin 7 2 2
MIRT621284 PIWIL1 piwi like RNA-mediated gene silencing 1 2 2
MIRT622594 PRRG4 proline rich and Gla domain 4 2 2
MIRT623273 MED28 mediator complex subunit 28 2 2
MIRT624247 VSIG2 V-set and immunoglobulin domain containing 2 2 2
MIRT624298 COMMD2 COMM domain containing 2 2 2
MIRT624526 C3orf62 chromosome 3 open reading frame 62 2 2
MIRT624567 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT624692 AR androgen receptor 2 2
MIRT624767 AKR1D1 aldo-keto reductase family 1 member D1 2 2
MIRT624829 ACO1 aconitase 1 2 2
MIRT625159 ZCCHC8 zinc finger CCHC-type containing 8 2 4
MIRT625261 ZNF566 zinc finger protein 566 2 2
MIRT625388 ZNF716 zinc finger protein 716 2 2
MIRT625827 FBXO42 F-box protein 42 2 2
MIRT625837 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT626021 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626052 PDE4C phosphodiesterase 4C 2 2
MIRT626354 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626778 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 2
MIRT627050 HOXA13 homeobox A13 2 2
MIRT627274 XIAP X-linked inhibitor of apoptosis 2 2
MIRT627310 WDR31 WD repeat domain 31 2 2
MIRT627916 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT630557 CCDC107 coiled-coil domain containing 107 2 2
MIRT630775 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT632083 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633138 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633711 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT634361 RNF157 ring finger protein 157 2 2
MIRT635739 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT636963 APTX aprataxin 2 2
MIRT637373 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT637815 GGPS1 geranylgeranyl diphosphate synthase 1 2 2
MIRT637911 FAM153B family with sequence similarity 153 member B 2 2
MIRT638474 PANK3 pantothenate kinase 3 2 2
MIRT638633 GSR glutathione-disulfide reductase 2 4
MIRT639493 TSPAN1 tetraspanin 1 2 2
MIRT639773 GPR45 G protein-coupled receptor 45 2 2
MIRT639781 RAX retina and anterior neural fold homeobox 2 2
MIRT639915 SLIT1 slit guidance ligand 1 2 2
MIRT640055 MCL1 MCL1, BCL2 family apoptosis regulator 2 4
MIRT640108 DUOX2 dual oxidase 2 2 2
MIRT640402 ZNF785 zinc finger protein 785 2 2
MIRT640555 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT640751 ZBTB26 zinc finger and BTB domain containing 26 2 2
MIRT640765 GLO1 glyoxalase I 2 2
MIRT640915 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641521 CREBBP CREB binding protein 2 2
MIRT641533 SNW1 SNW domain containing 1 2 2
MIRT641692 SPCS1 signal peptidase complex subunit 1 2 2
MIRT641745 MACROD2 MACRO domain containing 2 2 2
MIRT641866 STOML1 stomatin like 1 2 2
MIRT641951 RNF115 ring finger protein 115 2 2
MIRT642205 SMAGP small cell adhesion glycoprotein 2 2
MIRT642420 CILP2 cartilage intermediate layer protein 2 2 2
MIRT643028 LETM2 leucine zipper and EF-hand containing transmembrane protein 2 2 2
MIRT643406 PAX1 paired box 1 2 2
MIRT643500 ZNF195 zinc finger protein 195 2 2
MIRT643754 LEFTY2 left-right determination factor 2 2 2
MIRT643898 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT644036 CENPM centromere protein M 2 2
MIRT644200 LAT2 linker for activation of T-cells family member 2 2 2
MIRT644228 ADD1 adducin 1 2 2
MIRT644690 GPR55 G protein-coupled receptor 55 2 2
MIRT645128 HES2 hes family bHLH transcription factor 2 2 2
MIRT645347 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT645897 ATP2B3 ATPase plasma membrane Ca2+ transporting 3 2 2
MIRT645905 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT646049 NPR1 natriuretic peptide receptor 1 2 2
MIRT646137 C1orf147 chromosome 1 open reading frame 147 2 2
MIRT646219 DUSP10 dual specificity phosphatase 10 2 2
MIRT646385 SLC22A6 solute carrier family 22 member 6 2 2
MIRT646739 FADS1 fatty acid desaturase 1 2 2
MIRT646877 NT5C2 5'-nucleotidase, cytosolic II 2 2
MIRT647109 GNL3L G protein nucleolar 3 like 2 2
MIRT647523 PPIE peptidylprolyl isomerase E 2 2
MIRT647553 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT647755 NBPF3 NBPF member 3 2 2
MIRT648075 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT648225 TM4SF20 transmembrane 4 L six family member 20 2 2
MIRT648441 MYOZ3 myozenin 3 2 2
MIRT648823 ZNF689 zinc finger protein 689 2 2
MIRT649229 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT649237 FEM1A fem-1 homolog A 2 2
MIRT649249 TRIM65 tripartite motif containing 65 2 2
MIRT649459 WDR70 WD repeat domain 70 2 2
MIRT649637 RASA4 RAS p21 protein activator 4 2 2
MIRT650745 FKTN fukutin 2 2
MIRT651041 ZNF652 zinc finger protein 652 2 2
MIRT651754 VEGFA vascular endothelial growth factor A 2 2
MIRT651799 UST uronyl 2-sulfotransferase 2 2
MIRT652562 TLX1 T-cell leukemia homeobox 1 2 2
MIRT652776 TENM3 teneurin transmembrane protein 3 2 2
MIRT652939 SYNGR1 synaptogyrin 1 2 2
MIRT653006 STXBP5L syntaxin binding protein 5 like 2 2
MIRT653030 STX1B syntaxin 1B 2 2
MIRT653279 SNAP29 synaptosome associated protein 29 2 2
MIRT654057 S1PR1 sphingosine-1-phosphate receptor 1 2 2
MIRT654329 RBM33 RNA binding motif protein 33 2 2
MIRT654650 PTAFR platelet activating factor receptor 2 2
MIRT656577 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT656595 LSAMP limbic system-associated membrane protein 2 2
MIRT656646 LRIG1 leucine rich repeats and immunoglobulin like domains 1 2 2
MIRT656739 LMBR1L limb development membrane protein 1 like 2 2
MIRT656903 KIAA1958 KIAA1958 2 2
MIRT657392 HM13 histocompatibility minor 13 2 2
MIRT657528 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT657611 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT657668 GPR26 G protein-coupled receptor 26 2 2
MIRT657689 GPR155 G protein-coupled receptor 155 2 2
MIRT657818 GJD3 gap junction protein delta 3 2 2
MIRT658410 FAM208A family with sequence similarity 208 member A 2 2
MIRT658955 DNMT3A DNA methyltransferase 3 alpha 2 2
MIRT659425 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT659499 CISD3 CDGSH iron sulfur domain 3 2 2
MIRT659994 C2CD2L C2CD2 like 2 2
MIRT660215 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT660493 ARRDC3 arrestin domain containing 3 2 2
MIRT660761 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT660827 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT661576 EPHX2 epoxide hydrolase 2 2 2
MIRT661711 MTO1 mitochondrial tRNA translation optimization 1 2 4
MIRT661826 PRPSAP1 phosphoribosyl pyrophosphate synthetase associated protein 1 2 2
MIRT662123 APOL6 apolipoprotein L6 2 2
MIRT662254 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662314 ADM2 adrenomedullin 2 2 2
MIRT662341 MYLK3 myosin light chain kinase 3 2 2
MIRT662453 SEMA5A semaphorin 5A 2 2
MIRT662746 LRRC3C leucine rich repeat containing 3C 2 2
MIRT662901 GJB1 gap junction protein beta 1 2 2
MIRT663018 KIAA1586 KIAA1586 2 2
MIRT663102 THEM4 thioesterase superfamily member 4 2 2
MIRT663574 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT664125 C4orf32 family with sequence similarity 241 member A 2 2
MIRT664560 SORBS2 sorbin and SH3 domain containing 2 2 2
MIRT665589 TUBD1 tubulin delta 1 2 2
MIRT666464 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT666527 RNF170 ring finger protein 170 2 2
MIRT666874 POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 2 2
MIRT667055 PARVA parvin alpha 2 2
MIRT667282 NAV1 neuron navigator 1 2 2
MIRT667928 IGLON5 IgLON family member 5 2 2
MIRT667957 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT668336 FKBP5 FK506 binding protein 5 2 2
MIRT668718 DIP2C disco interacting protein 2 homolog C 2 2
MIRT669310 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669688 ABLIM1 actin binding LIM protein 1 2 2
MIRT671524 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT672112 TLCD2 TLC domain containing 2 2 4
MIRT672186 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT672702 ZNF677 zinc finger protein 677 2 2
MIRT673473 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT673617 HPSE heparanase 2 2
MIRT673763 ZNF333 zinc finger protein 333 2 2
MIRT674817 FAM229B family with sequence similarity 229 member B 2 2
MIRT675304 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT675404 SVOP SV2 related protein 2 2
MIRT676163 OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 2 2
MIRT676320 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT676347 PCCB propionyl-CoA carboxylase beta subunit 2 2
MIRT676526 RNF216 ring finger protein 216 2 2
MIRT676571 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT676588 RDH13 retinol dehydrogenase 13 2 2
MIRT676648 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT676723 METTL14 methyltransferase like 14 2 2
MIRT676805 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT676813 SHROOM4 shroom family member 4 2 2
MIRT677204 MURC caveolae associated protein 4 2 2
MIRT677284 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT677359 POC1A POC1 centriolar protein A 2 2
MIRT677516 SLC10A6 solute carrier family 10 member 6 2 2
MIRT677530 OCIAD2 OCIA domain containing 2 2 2
MIRT677627 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT677669 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT678056 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT678132 METTL21A methyltransferase like 21A 2 2
MIRT678154 SLC4A4 solute carrier family 4 member 4 2 2
MIRT678463 GLYAT glycine-N-acyltransferase 2 2
MIRT678614 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT678716 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT679161 ZDHHC15 zinc finger DHHC-type containing 15 2 2
MIRT679307 SSBP2 single stranded DNA binding protein 2 2 2
MIRT679430 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT679499 ZNF106 zinc finger protein 106 2 2
MIRT679963 VTA1 vesicle trafficking 1 2 2
MIRT679983 E2F2 E2F transcription factor 2 2 2
MIRT680153 TOP3A DNA topoisomerase III alpha 2 2
MIRT680304 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT680330 LRRC58 leucine rich repeat containing 58 2 2
MIRT680401 OXA1L OXA1L, mitochondrial inner membrane protein 2 2
MIRT683911 PSMB9 proteasome subunit beta 9 2 2
MIRT684183 MOG myelin oligodendrocyte glycoprotein 2 2
MIRT684238 C20orf144 chromosome 20 open reading frame 144 2 2
MIRT684284 CDK9 cyclin dependent kinase 9 2 2
MIRT685411 C1orf158 chromosome 1 open reading frame 158 2 2
MIRT686260 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT688250 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT688327 FAM151B family with sequence similarity 151 member B 2 2
MIRT688747 CNDP1 carnosine dipeptidase 1 2 2
MIRT689040 ANGPTL3 angiopoietin like 3 2 2
MIRT692525 PARD3 par-3 family cell polarity regulator 2 2
MIRT692984 LGSN lengsin, lens protein with glutamine synthetase domain 2 2
MIRT699866 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT699877 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT700840 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT701538 NCKAP1 NCK associated protein 1 2 2
MIRT703683 FAM189B family with sequence similarity 189 member B 2 2
MIRT708555 SPA17 sperm autoantigenic protein 17 2 2
MIRT708579 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT708721 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT708984 CABP4 calcium binding protein 4 2 2
MIRT709195 SAPCD2 suppressor APC domain containing 2 2 2
MIRT709679 PCDH17 protocadherin 17 2 2
MIRT709962 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710173 MTRF1L mitochondrial translational release factor 1 like 2 2
MIRT710329 STK40 serine/threonine kinase 40 2 2
MIRT710532 TMEM201 transmembrane protein 201 2 2
MIRT710628 ASB7 ankyrin repeat and SOCS box containing 7 2 2
MIRT711037 RNF187 ring finger protein 187 2 2
MIRT711227 RETSAT retinol saturase 2 2
MIRT711418 RAB3C RAB3C, member RAS oncogene family 2 2
MIRT711469 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT711636 PEBP1 phosphatidylethanolamine binding protein 1 2 2
MIRT711658 RAB21 RAB21, member RAS oncogene family 2 2
MIRT711704 GMPR guanosine monophosphate reductase 2 2
MIRT711924 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT712061 ZBTB34 zinc finger and BTB domain containing 34 2 2
MIRT712094 TMEM218 transmembrane protein 218 2 2
MIRT712541 CYB561D1 cytochrome b561 family member D1 2 2
MIRT714480 TBL2 transducin beta like 2 2 2
MIRT716323 SIGLEC10 sialic acid binding Ig like lectin 10 2 2
MIRT716750 C19orf24 chromosome 19 open reading frame 24 2 2
MIRT717014 MFSD6 major facilitator superfamily domain containing 6 2 2
MIRT717162 SHB SH2 domain containing adaptor protein B 2 2
MIRT717369 EDN2 endothelin 2 2 2
MIRT717481 PDE4DIP phosphodiesterase 4D interacting protein 2 2
MIRT718080 CLIC5 chloride intracellular channel 5 2 2
MIRT718545 PIGQ phosphatidylinositol glycan anchor biosynthesis class Q 2 2
MIRT718835 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT718864 LRSAM1 leucine rich repeat and sterile alpha motif containing 1 2 2
MIRT719149 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719687 ALDH1L2 aldehyde dehydrogenase 1 family member L2 2 2
MIRT719780 ZNF236 zinc finger protein 236 2 2
MIRT719859 KLF2 Kruppel like factor 2 2 2
MIRT720496 TMEM178B transmembrane protein 178B 2 2
MIRT720804 NUDT5 nudix hydrolase 5 2 2
MIRT720944 PPP1R3E protein phosphatase 1 regulatory subunit 3E 2 2
MIRT721344 LIF LIF, interleukin 6 family cytokine 2 2
MIRT721805 GRM1 glutamate metabotropic receptor 1 2 2
MIRT721924 LINGO2 leucine rich repeat and Ig domain containing 2 2 2
MIRT722429 HRNR hornerin 2 2
MIRT723971 GPR146 G protein-coupled receptor 146 2 2
MIRT724225 ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 2 2
MIRT724272 HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 2 2
MIRT724659 PXDN peroxidasin 2 2
MIRT725282 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT725434 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT725604 CAPN6 calpain 6 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-660 4-hydroxynonenal NULL 5283344 Microarray human leukemic HL-60 cell 19022373 2009 up-regulated
miR-660 Vorinostat (SAHA) approved 5311 Microarray A549 human non-small cell lung cancer cells 19513533 2009 up-regulated
miR-660 Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
miR-660 Vitamin D3 approved 5280795 Quantitative real-time PCR Plasma 22594500 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-660 Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-mir-660 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-660 Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-660 Androstenedione+Letrozole resistant cell line (MCF-7)
hsa-mir-660 Cisplatin 5460033 NSC119875 approved resistant cell line (KYSE)
hsa-mir-660 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-mir-660 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-660 Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-660-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-660-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-660-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-660-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-660-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-660-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-660-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)

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