miRTarBase - #MIRT479924


—
pre-miRNA Information
pre-miRNA hsa-mir-4650-1   
Genomic Coordinates chr7: 67114322 - 67114397
Description Homo sapiens miR-4650-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4650-2   
Genomic Coordinates chr7: 72697903 - 72697978
Description Homo sapiens miR-4650-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4650-5p
Sequence 15| UCAGGCCUCUUUCUACCUU |33
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1332063492 8 dbSNP
rs914649075 9 dbSNP
rs1452034829 10 dbSNP
rs1489220537 15 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CBX5   
Synonyms HEL25, HP1, HP1A
Description chromobox 5
Transcript NM_001127321   
Other Transcripts NM_001127322 , NM_012117   
Expression
Putative miRNA Targets on CBX5
3'UTR of CBX5
(miRNA target sites are highlighted)		 
>CBX5|NM_001127321|3'UTR
   1 AGGAGGGGATGGTCTCTGTCATTTCTCTTTGTACATAATACATTCACCTCCCTGCCTCCTCTCCTTTCTACCCACCCCTT
  81 TCTATCCTAAACACATCCATAAAAAATGTGCTTATCACTGTGCTCCACAGGAGAAATGTTGGTATTGGTTCTCTTGTAAC
 161 ATAACTGATGGTCTGATTAATGATAAGTGTCTCTCTGTGAAGACCAGGCATTTACATACTGAGTGTAATACCCACAATTT
 241 TTTTTTCCTTTGCCCTGATCTCTTCCTTCTGCTTCCCTGTGACCTCAAGATGAGTTTCAACTTTTTAATCACCTTAGAGT
 321 CTTGATCTTTTCAGGGTTGGTCGCTTTTTAGGTTGGGGGATTTTGTTACAATGATGTTGAATTTTGGTTTCTTGCTTTGG
 401 TTCTTAGAACATGTTGCTGACTAGCTGGCCTTTGTTCTGACATGTTGAGATGGAAAGGATGTTGCCCATCTGTTAAAAAG
 481 CCAATAGCAACTGCCTACCTGTTGGGGCTTTCCCAACCTTGTTCAGCTCTACCCAGGAGAATACAGGGTTTCTGGTGTGG
 561 TCTTCTGGGCCACCCTCTGTTGTTCATCCTCACTCATCCTCCCAGAATTACTCCATCCTTTGGAAGATTTGAAATTTTAC
 641 ACTGAAATCTGTCAAGACACTCTTTTTAGCCCCAGGACTTTCGGTATTGCTTTTAGCACTCCCCACTTCTGCTTCTGTAA
 721 AGTGATATCAATTTGTGATAAAATGACAAGATTATTAACTGTGCAGATTTGTAGCTATAGTACATGAGGATGATGGGGTA
 801 GGGTACAATTGTCTTTATTATCATATATGGTATGTATGTATGATTTCTTTCCATTCCTCATATTTAGACTGTATATTTAT
 881 GTAGGTGTGAGTGATTGCCTGGTGCTTGCTTGTGCCAAGGTGCTAGGCACCCTCCAACCCTGCCAACTTTTGTGGCCTCC
 961 CAAAGCATTCCTGTTACCAAAGAGGCTTCAAACCTGACCCTCACTTCTCAGTGGACCCGAGTTTCCCTTCCATGCCATTA
1041 TTTTCAGTGGGGAAGTTTTAGAGGTGAGCTGTTGGCCACAATATCAATTTTAAGTGTTCATAGCAGTTATGTCTCCTGCA
1121 TTCTTGGCTCCTGGATTTACCACCAAGAGTCCCCAAAATATTAATGCTCTTCCCTTTTTCTACCCTCAAACTTATAGTTG
1201 TATCTTATTTTTTAAAATGAATTTTCATGGCCAGGCACAGTGGCTACCGCCTGTAATCCCAGCACTTTGGGAGGCTGAGG
1281 CAGGAGAATTGCTTGAAGCCAGAAGTTTGAGACCAGCCTGGGCAATGTAGTGAGACCCCCTGTCTCTAAAAAATATAAAT
1361 AAAAATAAAGGCATGTTCCTGAAAGACTGTCACCTTGGAAAGTGACAGGCCCTGGCATTAGCATGTTGACACACCCTTTT
1441 CTTCTTACTCAGCAAAATACTTCGTTTTGGTTTCTTCTTGTGTTGCTATTGAGAAATTTGTCTGATCATATCCTTCTGCC
1521 TTTGTCCCCCAAGAAATGCCCTACTTTATCCTTTTCTTTTTGTAGTTGAGGAGGGCTAGAGAATCACAATTAAAAGTAAG
1601 GAAATAGCAGGGTTTTGAGGATCCTTGTCCCAGCCCCAAAGCTGAGGAAATAAGAATAAATGCTTAATATAGCCTTAATT
1681 CTAGAGCGCACCAGCCATGAGGCTGCTTTTCTTGTTGTTTTTGATTTTTAAAACATACAGCTGTCTGGCCAGGAGCATCT
1761 ACCATTTCTAGATTATTCAGAGTAATGAGGGGAATGGATGGATTGCTCCAGTCCACAGATGAGCCACATAATATGCAAAT
1841 CATATACCCATTCATAGCATTTGTTAACATTGCTTCCCTGCTCAGCTGCTGATTGAATTCTGTGTGCTTATATAAATTAT
1921 GTCAAAAATTATACTGCATAATTGAGGTGACAGCTGTTGCTGCAGTGACATGACAGACTGGAACAATGAAGCTTTTGGTT
2001 TAAGTCAGCCAGGAAAATCCTTCTGAATGGTAATGTGATTGGGCAAGAGCTCATAAACCATACCTCAAGTGGGTGGGAGT
2081 TTTATCTCTATATTCCTTCTCTCTCTGAAGGAATTAAAGGCCTAGATCAAGTGCTGGATAATTGACAATTGCTTGTACTT
2161 AATCTGATCGGTATCTAAAAGAAGGAAAGGATGGTCAGGAAACATTTATCATAAATGTAGCCAAGGATATCAATTAGGGT
2241 AGACAAGAATAGGACAAAAATAGGCCAGAGCTCCTGAGGAGGTGATATGGGTCTCTTGATTTGCAGAAAATGACAGCCTA
2321 TCCAAGTGGCCCAGTGTATGCCTCCCAGTAGCAGTGGGCATGTAAACTGCAGCGACCTTATTTTTAAAACCAAAAACCTA
2401 GTATGTGGACAAAGAACATGACAATATTTGGTACTGAGATTGGTTCTGAGAAACCTGGGGCATGTGGCTGCTGTGGTTAT
2481 AGGTAATATTTAAGACATTCATAAAAATCTGATATTCTTTTACCGAAATAACCCCAGTATCATCTACTACTTACCATCTG
2561 TTAATAGACTTTACTCTGTCTTTTTTGTCTTCGGTTTATTGTACTGAGTGCCGCCAAAACAACTTTTGTTCTCTTCCTGC
2641 CTACCTGCAGCTGGTTCTATAGGAATGTAGGGAGCCAGAGGCCAGTATTGATTTCAGCCCTTAGCACAAAGGAAATCAGA
2721 TGCCTGCTTCCAGCATTTGTTAGTGTTGAGTAGATGTTCTTGCCCTAGAAGAATTACAGCCTCAAACAGAAACCTGTTTC
2801 ATGGAGCTTTCTCCCCTCAGAAGAGTTAATAGTTAAGAGCTAAGCACTCTTAAACACCTAAGTCTCAAATGCTAAAAATT
2881 TATTTTTCTTGTGTTTAGTCCTCTTTCAAGACATCTTTCTAAGCCTTTCAGTAATCAACATTAAAAGATCTCCCTTTCTT
2961 CAGAGTTATAGCACAGCTTTGCCCAGTAGAGGCTACCAAGGACAGCTTAGCAGCCCTTTGATTGCTGGGCTGGGCAGATG
3041 GCCTTCAAGTTAAGATCAAATGCCGGGAAAATCAGCCTACATGGGAGCACCCATTTTAAACCTGGAGAGAACCATGATGT
3121 TTTCTTCTTCAAATAACAATCTAGTTTTTTTTCCCCCAGTACTAAAATTGTATTGTCTTTCAGACAATATAATTTTTATT
3201 TAAAATTGGAACATACTATCTTCATGCTTTCTAAGCTAAATCTTCATTTAGATTTCACTCCTCAGTAGATCCCAGAGAAG
3281 AAGCTATATAGGATCCAGATTCAAATTTAACAGTGTCTTCTACTTTTTTAGTTATGTTTTCTATCAACTCCTGCTGCCTT
3361 TTCAAATACGGATATTTTTCAGGAGACTCTTCTACTTGTCCACTGACTGTATTTTTTCCTTTTTGATCCGTAGCCCTGGT
3441 TAAATGGCTGACATCCTTCCGTGGATGATTCTTGGAGGTAGTCTCAGAATTCCAAAGTGATTGTCTGTCTTCTTCTTGTC
3521 TTGATCCTAATGCAGACATTCACCTCTATTATTTATTTATTTTTTTTAGACAGAGTCTCGCTCTGTCACCAGGCTGGAGT
3601 GCAGTGGCACAATCTTGGCTTACTGTACCCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCT
3681 GGGACTACAGGTGTGTGCCACCATGCCCAGCTAATTTTTGTATTTTTGGTAGAGATGGGGTTTTACCATGTTTGCCAGGA
3761 TGGTCTCGATTTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACCGTGCC
3841 TGGCCACCTCTATTAAATTTTTGTGGACAAAAATAAAATTGTCATTATTTGTTTGCTCTCATGGAGCACTTTCAGTAATA
3921 CAATTTTTTTTAAATTCCAGTTGCCCTCTTTGTTGCTCTGTCCTCTGTAATACCTGACTTTGCTAAAGACTTGAGGGGTG
4001 GTTTCAGAGGAGGGTCAGGTGATGGGAAGGCAGGATGAGAAAAGCCCTGGACTTGCATGTTTGAGAAGGCTTCCAACCAC
4081 ATCTTCACTCAGACTCTTGGAATTCCTGTCCCCAAAACAAGCTTCTGTTTTTTGCTCACAATGCTATATTTCTAAATTTT
4161 TCCTGAATTACTGAGAAGCAGTCATTAGCTTTGTTAAGTTTGGTTTGGGGACATTGTTGGTATCAAAAATCGAAGTCTTA
4241 TTCATTTGATGTAGGCCATGAATCATCAATAACTGGTTGCTGGAAAGCTTGACTACCATCCACTGGGGTGCTATTTTGAG
4321 AAGGATTTTTGGGTATCTTTATAGTCTGCAATTAGTTGATGATTGCTTTCTAGTTTATCAACTGCATTTATATTTGCTTT
4401 TCTGTTCATGGAAAATCCTTTATTTGCTGGGGTTTTTTGTTTGTTTGTTTGTTTTTCCCACTTACAGCAAGTAAAAGTGG
4481 TCTGAGGTTATCCTTGTTTTTCTTCGCGGTTTGCCATGTGTGAAAGTAGATTTCCTGCTATTGATATATTCTCATTATAG
4561 ACAGAATAGTGGAGAACAGTGTTGCCATGGACAAAATCCAGTTTTGGTCCACTCTGGGGAGCATTTGGACCTGTGGTGCT
4641 TCTAACAATTAAAAGTCTAGATGGTCCTTGACTGTCCCCCAGCCATACTGCATACTACTTTGTGCATTCTACTTTGTGTC
4721 ATTAATGAAAGATTGGTTCTGTCCCTGTAACTTAGGCATTTATTATTCTTAACTCTTCATTCCTGTTCTGTAGCCACCCA
4801 GCAGTCCATTTTCCCTATGTTCAGGCCAAACCACAGGGCATTGGGGAAGGTTTTTGGGATTTTCTTATTGAGATTTTGTT
4881 GAATCTGTAGTTTACCCCAGCTTTCCTAAGGTACAGTGAGGGGTTGGAGGGATCTGTGTTTGGCCCGGGGAGCAATTGTC
4961 TCTACCTTAAGGTTCAGTTTTGAGGGCATAAAATACTACTTTGCAATGTCATGAGAACACCGTTAGATCTGAAATGTGGA
5041 AATGGTTTCTCACAATTTAAAGGAAAAACCCACTTTGCACCCATGATCCCATCATTTTGGTTGAGATTTTAGAATAAAAA
5121 ATATAGTGTTGAGATCCGTACTTTTGTAATCAGACCACCAAGCATGCCTGTGGCAAGGCAGAGAGGAAAGGTCTGGAGCC
5201 AGTGTATTGCAGTTTCATGCTACCTTTACCTGCTAATCATAAAAATTATGTTTTCAAAAGTAGATGATACTAGCCTTACA
5281 CCCAAAAACATGTTCTGAATTAGATGCCCCCTCACCCAATTTTTATTAAGCTTTCTAAATTCCAGCCACATTGCTGTACA
5361 TCAACATTGGTTTCATTCAACAGACATTTTTTTGGCCTGAAGATACAAGGTTCAGAAAGAGGCCATCCCTGCCCTCAAAT
5441 AACTTTCATACTGGTGTATGATGAACTGACCATTAATAGTTTAAGTGCTTACAAGCTATGTTTCTGTTCAAAAAAAAAAT
5521 AGTTTGGTATAATAAATGCTATAAACCAATACACATTTCTGACTTGGGGGCAGAGACAGACTGGCTGATGTTGTATAGTT
5601 TGTAGCCCTGGAGTAAGAAGTTGACATTAATTTCGGCCTATATGTGGAAAAGACCTATAACATTGGGTGAACTGAGCCAG
5681 CTGGCCATAGAACACAAGAACATATTCCAGGAAATAAATATAGCTGGAGGGTTGGAAATGCTGTTATTACTGAGAGAGAA
5761 AACAGGTGAGTTGGGATTGAGAACTCCTGATTTTCATCCCTGGTTTAGATTCTTGGCCAAAGTAGTGGTAGAGTTAATCT
5841 TTGCTTGTGGAAAGCATTAACTATGTTGCAGATTCAGTTGTGTTACATTATTGTGGGTTCTATAACAACATATTCCTCAT
5921 GGACACTTTACCAGAGTTGCTCACACCTTTTTCAATTTCTCATCCCTTTTGGAGGAATGAACATGAGACTTAACTGCCTT
6001 TAAGCCTAAAACGGACATGCTTTCCAATGACAAGAGATTTTCTAAAGAGAAGTCTTGGAGCACATCTGTTAATACCTGAG
6081 CATCTACTCTGAGCAGTGCAGTTTTATTCAATACTGGAGAGAGGGTGATTTCTTTTTTTTTGAGACGGAGTCTTGCTCTG
6161 TCTCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTC
6241 AGCCTCCCGAGGAGCTGGGACTACAGGCGCCGGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTT
6321 CACCTTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCACCCACCTCGGCCTCCCAGAGTGCTGGGATTACAG
6401 GCGTGAGCCACCGCCGGGCCGAGAGGGTGATTTCTAAGCAGAGAATTGTATCAGTTATGTGGAAACCTTTGCCAGAAATA
6481 CATATACCTTGTATATTAAATCTGAGTCTCAGATTTAATCATCGAAGCGTAGCTGGGTTAAGAAACAGTCTGATCGTAAG
6561 GATGTTGTCGATTCTGACCCATGGATGACCACAAGAAAAAGATATTTATTTCTGCCTGGATAATTGAGAGTTGACTAACT
6641 TTGGAAGTCAGAATTCCCAGGAATTAGAGTAACTGCTCTGGAAAGTTAAAGTGTGAAGTTTTTTAGATAGTTTCATAAAA
6721 ACAATTCTGGTTTCTTTTTGCTTGTGCTGACTTTCTTGGATTTTAATCTACCTCATCTTGTCTTTTTAGAGTTACTTCAA
6801 CTTGTCACTTTAACATTGTGCTTGACTTTGGTTGTTTTCTAAGATGGAATTTTTCCTGTTCATTGACAGCTTGTTCTCTT
6881 GCCTTTTCATTCTGATCCTCATTTCATCTAACATCATCTCATATTGCTCCTCTGTCAAGAGAAATGTTTTAAAATAGTTT
6961 AAAGTCTTGTTTTATGGGAAGAAAGTGATCCTCCAATGCTATTTGTTTCTGAGGTCAGTAAGAGAAGGAGTTAAAACAAG
7041 GCAGTGGGGAAGGGAATGAATCCTGCACTGGAGGCAAAAGCTGACAAGGAAAGAGCCATTAATTAAGACAATTTCAAAGT
7121 CAACTGATTGTGATCATTAATGTCACAATAGATCAAAACCTAATTATCACAGCCTAGGTAAGAGCCATCAGTATTAATCG
7201 GAAAATCTAATAGGAAACTATTATCAAGAAATTAGGCCAAATTGAATGCAGTGAACTTTTTATCTTGGCATTCTCTATTT
7281 TTTTGTGATGTCCCCTGGCATTGGCAGGTGTGACCCTAACAGTCGATTCAAGGCCAAGTGGTCAGTTTGTCAGCCTTTTT
7361 TAAGGGATTTCTTTTTATTTTTAGGAATTCCAAACAGAGTTAACCTAAACTGTCATTGCCAAAAGATCAGTCTTAAACTT
7441 TCTTAGCACCTGTACCTGTTTAATGTGATCAGCTATCAGTGAGGAAAAAAAAAAAAATCTATTTAGGTCTTGGAATGGTT
7521 CCTGTACCTAGAGTATCCATATTGAACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAAACTTGCTCTTTTGCC
7601 CAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAGTTCTCTGCCTCAGCCTC
7681 CTGAGCAGCTGGGATTATAGGCGCCTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTCACCATCT
7761 TGGCCGTGCTGGTCTTGAACTCCTGACCTTGTGATCCGCCTGCCTCGGCCACTCAAAGTGCTGGGATTGCAGGCGTGAGC
7841 CAGCACCCGGCCACAGTATCTTTATTACAGCTCACTGCAGCCTCAATCTCCTGGGCTCAAATGATCCTCCTGCCTCAGCC
7921 TCCCAAGCAGCTGGGACTACAGGCGCACACCACGGTGTCTGGCTAATTTTATTATTTAAAAAATGTTTTGTAGAGACAGT
8001 CTCCCTGTGTTGCCCAGGCTGGTCTCCAACTCGTGAGCTCAAGTGATCCACGTGCCTCAGCCTCCCAAAGTGCTGGGATT
8081 ACAAGCATAAGCCACCGCACCCGGCCCCTAGTGAACATTTTACTGTATGTGTTGATAAATCATCTTTTGAGTTTCTGTTG
8161 TATGTGGGGACTTCCTACACTGGCTGCTGTGAAGAGGTATGGAAGAAAGGAGAGGCTTTCTGCCTAGAAATTCTTTGAGA
8241 ACACCTGAAAAGACAGTTTAATCATGTCACAACACTCTTAAGGCTCAAGTCAGTGTTCTGGTTTCCGGTAGCTTTAGGAT
8321 TGGATTCTAAACGAGGGCTGGTGGTGAGTTTGGTGTTTGTCTCGTGTCACCCTCACCCCTCACCTCCTCAGTTTAGGATA
8401 AGAGACATAATGATTTCTACCAGAATCCAAAGTAAATCCAAAGGGGGAGAAAAGACATAACTGTTTTTTCTTCTACCTTT
8481 TTTTTGTTAAAGAGTTACATCTCTCACAGGAGGAAAGAATTCAAGAGTCTATATGATTAGTTACAGAGAATATTTTCATC
8561 CCCTCTCCCTGAATAGAAAAGCAGGGGTCACCATTTGTATCCTTACCCTTGAGGTGTTTTTGAAGATGCTGTAACTCTTG
8641 AAGTTGAGCTGAGGCAGAAAGGTTGGAAAAATGCAGCCCTCTGGGTATTGTGGGGAGGGATGTGATGTAGTAAGAGGGTG
8721 TTTTGTGGTGCTAGGATTCCCACGCCACCAACTTGCAGCTTTATAAGAGCGCTACCAAGAACCACCACTGGGGAAAAGGT
8801 TCTTATTCATTGTTTCTGTTGGAATGTGATCTTGCTTTCTGGATTTTAGGAATTCAGGTTACTCAGTATAAAACTCTGAG
8881 AAATCAGTGTGACTTAGTCCTTCACCTCCTAAGATAAAGTGAATATTTCTTTACAAAATAATTCATGTCCTTAATGTTAA
8961 AGATGTAATTTTATTTTCAAAACATCTATAACATGACTTTCAGAAGCAGTTCATTTTTCCAAGATTCCTCACATTATACT
9041 AGATAAATAATAGGCCCTCAGTTAATACCCTTCAGTTATTGAATTAATCTAGTTTGTGGAATGAGGTGTATCCTGCCAAC
9121 TTCCCTCTGCTCCCAAGTACACTCTGAGAGGTAAAATGCTCTGGGAAATGGAACAAGAATCGAGTGGATGCTGACTCTGT
9201 GTGCCCACCTCCTCAACTGATTGATAATGGTTGACCTTGGGCAAGTCACTTCTTTCAATGCCTCAGTTCCCCATCTGTCA
9281 AATGGGGTTAATAATACTGACCTACCTCACAGGGGTGTTGTTGTGAGGCATTGTAAATCAAAGTTAATAGAATACTTCAG
9361 GGTCCTCTGTGGAGGATGTCTTGAGCCAGAGTTTAAGCCTGACACACAGGCTTTGGTCCTCACTGAGCTGTCTCCAAGAC
9441 TGGAACTACTTAGTGACTCGGCAAATTTTCTGCCCCCCACCCCTCATCAAAGCTGCTAGTTCAGATGTTGACAGTGTTTT
9521 CATGAATGTTGGAATCTTACTAGTCCAGACTTACTTAGGATGTTGTTGGGGAAGGCACTTGGGATTTTCTGTGTCTTGCA
9601 TTCACAGAGGGAGGCCATTTCAGATTCAAGAGCATTGGATTAGGGAATCGTGAGGCAGGGATGCTACTGCGTATTTCTCT
9681 CTGCAGGTTGGGGATTAAAGTTCCTTTCCCCATGGGTTTGAAGCAGACTCAGACTGTCTCAGGATCAAAGCAACCCTCAA
9761 TGGTTTTGATTTATGTCATTGCTTACCACTCCCCAACCAATCCCAGGACAGCTGGGTCACTGTACCCCTTTGTGGTATCT
9841 GTACCTGGGCCTCTCCTTCCTCATAGGGACCAGCTGATTGAATAAATGTGACCACCTTATTTCCACCCCCCACCCCCAAA
9921 AGCTACATTGGAATTATTTTTCCTAGAAATGTGTATAACACTCAGAATTGGGCATTGATCCTTAAAGCTTCATCCCATTC
10001 ACCGTATTCAACATCTGTCATCTCTTAGTGTCTGCAGTCTGAACCTAACCTTGACCTTTTTTCCCTCTGGTTTGAGAAAA
10081 CTTTGGACACTATTTCTACTTGGCCAGGTGTGGGCTCAAGAGCCTTACTCTTTCCATCTCAGTTTAGGGGCGCAGCCAGC
10161 TCCTCTTCCCAATAGGGCTCTTTCTGCTTTCCCTCTCCTTGGCCCTAGATTTGTAATCCATGAAAAAGCACAAGGTCCTG
10241 GCTCCTTGCGGTCACATTCTGGTTCTCTGTGTTTTGTGGACTCTGCTCTCACTGTTCACCCAGCACTAGCAGTACCAGAT
10321 GGTTCTGTGGAGTCCTGGGGAATGGAGAGAGCACAGTCTGACTCCCTGCCAAGTAGCCAGGAGTTGACTTGCCCATGGTC
10401 CGCTGGCTTTCCCACCACTTCCTACAGGATGGGATCTAAGAGACTCAAGAGCTGGGTTTCTTTCAGCACTCTGTACTGTC
10481 CCAAATAGCAAACAAATCACTTTGTAGCCAGATTTCTGAATGGAAATGAGAAATTGAATTCTCCATGGACTTTTAGGTTT
10561 ATGGGGGAGTTTTAGCTGTGTTTCTTGGTTTTATTTCAGCCAAACATGTCTGCTTTTGATTTTTTTTTTAAAGTATAAGT
10641 GGTCTATATATATGTTCACCTTTTAAATGTAAATGTTTAAAAAGTAAGCATTTATGTGTTTCCATAACTGACATCTGATG
10721 CAGACCTCATTCTCTCCCCCTCTTCTACCCTCCTCTTTTCCCCCTTTTCATACTCTTGTATTGGTTCTAATAAATGGTTG
10801 CTTTTCAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuCCAUCUUUC---UCCGGACu 5'
            || |||:||   |||:||| 
Target 5' aaGGCAGAGAGGAAAGGTCTGg 3'
 5175 - 5196 145.00 -20.50
2 
miRNA  3' uuCCA--UCUUUCUCCGGacu 5'
            |||  |||||||||||   
Target 5' aaGGTTCAGAAAGAGGCCatc 3'
 5407 - 5427 135.00 -21.02
3 
miRNA  3' uuCCAUCUU---UCUCCGGAcu 5'
            || ||||   ||||||:|  
Target 5' atGGAAGAAAGGAGAGGCTTtc 3'
 8199 - 8220 129.00 -13.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31483008 6 COSMIC
COSN30110165 18 COSMIC
COSN30525385 25 COSMIC
COSN31481697 27 COSMIC
COSN26969330 29 COSMIC
COSN30456949 39 COSMIC
COSN30524238 45 COSMIC
COSN26969331 48 COSMIC
COSN30154581 82 COSMIC
COSN20071370 101 COSMIC
COSN30189474 108 COSMIC
COSN21843816 112 COSMIC
COSN30110089 317 COSMIC
COSN22271032 725 COSMIC
COSN19461335 897 COSMIC
COSN17571976 1213 COSMIC
COSN17076470 1463 COSMIC
COSN22012148 1745 COSMIC
COSN5946557 1970 COSMIC
COSN7374191 2131 COSMIC
COSN1576742 2355 COSMIC
COSN1576741 2414 COSMIC
COSN27161109 3036 COSMIC
COSN4619081 3334 COSMIC
COSN30312391 3559 COSMIC
COSN23468627 3579 COSMIC
COSN1576740 3801 COSMIC
COSN4899046 3816 COSMIC
COSN20077768 3905 COSMIC
COSN32057082 3923 COSMIC
COSN23853047 3995 COSMIC
COSN25932515 4436 COSMIC
COSN1576739 4791 COSMIC
COSN5324142 5190 COSMIC
COSN31960799 5330 COSMIC
COSN17370903 5444 COSMIC
COSN1149586 5510 COSMIC
COSN9751727 5524 COSMIC
COSN22275737 5526 COSMIC
COSN22870990 6132 COSMIC
COSN15321322 6284 COSMIC
COSN7374190 6527 COSMIC
COSN216924 6668 COSMIC
COSN5946556 6696 COSMIC
COSN20109679 7484 COSMIC
COSN27270294 7485 COSMIC
COSN26480768 7659 COSMIC
COSN5946555 7930 COSMIC
COSN15830628 8213 COSMIC
COSN20109678 8764 COSMIC
COSN22974213 9019 COSMIC
COSN15662629 10040 COSMIC
COSN5946554 10196 COSMIC
COSN8586360 10292 COSMIC
COSN30566184 10444 COSMIC
COSN26336837 10654 COSMIC
rs4759348 5022 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1266343225 1 dbSNP
rs962398162 2 dbSNP
rs558897963 3 dbSNP
rs772992755 6 dbSNP
rs1240210215 8 dbSNP
rs767278537 11 dbSNP
rs761346011 15 dbSNP
rs773760169 16 dbSNP
rs1391385011 18 dbSNP
rs768601889 20 dbSNP
rs1326697075 22 dbSNP
rs373958772 30 dbSNP
rs775549829 33 dbSNP
rs769464686 39 dbSNP
rs745730704 41 dbSNP
rs370145323 42 dbSNP
rs747050000 45 dbSNP
rs777683374 50 dbSNP
rs987590474 66 dbSNP
rs139245125 73 dbSNP
rs1194618843 82 dbSNP
rs1460427958 84 dbSNP
rs1458590395 103 dbSNP
rs1203476437 105 dbSNP
rs750181266 114 dbSNP
rs1263071838 125 dbSNP
rs1224603540 129 dbSNP
rs1050886495 134 dbSNP
rs554630888 141 dbSNP
rs1372585161 142 dbSNP
rs1326143945 146 dbSNP
rs1169698550 154 dbSNP
rs1276747556 158 dbSNP
rs922069479 159 dbSNP
rs1010331502 161 dbSNP
rs191159282 174 dbSNP
rs891844938 181 dbSNP
rs773118070 183 dbSNP
rs1403556023 191 dbSNP
rs1454249111 197 dbSNP
rs772371810 202 dbSNP
rs762061268 203 dbSNP
rs1325368955 208 dbSNP
rs1224674037 209 dbSNP
rs1214331790 211 dbSNP
rs1330394994 217 dbSNP
rs1301243599 218 dbSNP
rs1054540503 229 dbSNP
rs774701984 231 dbSNP
rs1271398642 233 dbSNP
rs974919735 240 dbSNP
rs78078716 246 dbSNP
rs200437127 247 dbSNP
rs968903826 247 dbSNP
rs61921429 248 dbSNP
rs1010532983 253 dbSNP
rs1201280817 256 dbSNP
rs955985894 270 dbSNP
rs1362991899 275 dbSNP
rs936031035 283 dbSNP
rs927300459 290 dbSNP
rs112953759 291 dbSNP
rs1424407423 300 dbSNP
rs1045063028 301 dbSNP
rs1175534183 309 dbSNP
rs950303362 313 dbSNP
rs1467344020 337 dbSNP
rs1405368833 339 dbSNP
rs1383839890 341 dbSNP
rs917414919 342 dbSNP
rs905967503 343 dbSNP
rs1319787259 352 dbSNP
rs1340538005 362 dbSNP
rs1404886725 365 dbSNP
rs1281891035 367 dbSNP
rs1326135370 369 dbSNP
rs983545668 371 dbSNP
rs929474979 372 dbSNP
rs1470938874 386 dbSNP
rs918370011 410 dbSNP
rs973779973 429 dbSNP
rs1169552815 439 dbSNP
rs1348878454 442 dbSNP
rs1428888812 450 dbSNP
rs769777680 466 dbSNP
rs879226225 477 dbSNP
rs1421209163 482 dbSNP
rs1198630017 487 dbSNP
rs565810784 488 dbSNP
rs1044899857 492 dbSNP
rs1434806000 495 dbSNP
rs1012025000 498 dbSNP
rs1362998672 501 dbSNP
rs1451195367 513 dbSNP
rs1160015574 524 dbSNP
rs1179687608 525 dbSNP
rs899040790 528 dbSNP
rs1037539491 529 dbSNP
rs186750193 532 dbSNP
rs1463090324 533 dbSNP
rs1387842356 543 dbSNP
rs962714947 547 dbSNP
rs1204349793 555 dbSNP
rs528691240 565 dbSNP
rs766215192 573 dbSNP
rs1298015432 574 dbSNP
rs146182425 582 dbSNP
rs1489457906 585 dbSNP
rs955282583 589 dbSNP
rs955707297 591 dbSNP
rs552468488 595 dbSNP
rs1315882076 598 dbSNP
rs933004270 604 dbSNP
rs1010110626 612 dbSNP
rs974932389 613 dbSNP
rs1423598637 618 dbSNP
rs1161189013 621 dbSNP
rs968870485 626 dbSNP
rs1458867893 629 dbSNP
rs891623513 635 dbSNP
rs770721999 644 dbSNP
rs758259245 651 dbSNP
rs989028999 653 dbSNP
rs1449527480 662 dbSNP
rs1310409467 663 dbSNP
rs1297466311 665 dbSNP
rs1382396131 667 dbSNP
rs1244038899 674 dbSNP
rs1317273868 675 dbSNP
rs182919989 682 dbSNP
rs956289552 683 dbSNP
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rs1000264281 709 dbSNP
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rs73114530 897 dbSNP
rs941089984 905 dbSNP
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rs200948942 909 dbSNP
rs1038764579 913 dbSNP
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rs1292773890 940 dbSNP
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rs761990928 969 dbSNP
rs1248266100 991 dbSNP
rs559800750 994 dbSNP
rs1217303690 1000 dbSNP
rs988998031 1007 dbSNP
rs1315142141 1009 dbSNP
rs188362811 1018 dbSNP
rs928891137 1019 dbSNP
rs754131992 1021 dbSNP
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rs577125148 1037 dbSNP
rs970083077 1052 dbSNP
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rs1479727025 1071 dbSNP
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rs1400341424 1089 dbSNP
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rs1032819145 1092 dbSNP
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rs1420435298 1099 dbSNP
rs1015653657 1100 dbSNP
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rs530209682 1110 dbSNP
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rs1004659403 1140 dbSNP
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rs562873668 1151 dbSNP
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rs750521602 1158 dbSNP
rs1355381220 1159 dbSNP
rs1362663025 1165 dbSNP
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rs1450457830 1172 dbSNP
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rs767648082 1175 dbSNP
rs543716466 1180 dbSNP
rs1469900064 1181 dbSNP
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rs997845081 1189 dbSNP
rs761979654 1195 dbSNP
rs1363730076 1200 dbSNP
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rs1306773256 1245 dbSNP
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rs900133178 1248 dbSNP
rs1047990990 1249 dbSNP
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rs929535674 1256 dbSNP
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rs892873652 1260 dbSNP
rs536294090 1266 dbSNP
rs1291282256 1269 dbSNP
rs1260255651 1279 dbSNP
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rs1345849641 1321 dbSNP
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rs1491432364 1341 dbSNP
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rs1444314560 1391 dbSNP
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rs577385991 1428 dbSNP
rs962711297 1432 dbSNP
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rs1168394935 1442 dbSNP
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rs759395615 1453 dbSNP
rs776246042 1459 dbSNP
rs1261285391 1463 dbSNP
rs111639028 1464 dbSNP
rs143172104 1471 dbSNP
rs1261193246 1480 dbSNP
rs773192089 1488 dbSNP
rs1319171758 1501 dbSNP
rs1223330363 1503 dbSNP
rs1017557052 1507 dbSNP
rs1347481672 1508 dbSNP
rs1201178813 1510 dbSNP
rs1011235148 1532 dbSNP
rs892843989 1543 dbSNP
rs1285003487 1548 dbSNP
rs548242076 1552 dbSNP
rs35767351 1562 dbSNP
rs993717815 1565 dbSNP
rs530115960 1566 dbSNP
rs1038354896 1576 dbSNP
rs559550790 1579 dbSNP
rs1325558356 1581 dbSNP
rs934410579 1583 dbSNP
rs889268177 1587 dbSNP
rs1467273519 1592 dbSNP
rs1049516101 1598 dbSNP
rs1295760532 1606 dbSNP
rs933701964 1609 dbSNP
rs190702947 1613 dbSNP
rs1417364876 1614 dbSNP
rs1299470752 1615 dbSNP
rs1341740231 1620 dbSNP
rs922273035 1624 dbSNP
rs186347027 1639 dbSNP
rs1403200849 1648 dbSNP
rs1299646073 1649 dbSNP
rs1333126906 1650 dbSNP
rs1046337242 1656 dbSNP
rs1052733338 1658 dbSNP
rs1351759453 1664 dbSNP
rs1469773436 1669 dbSNP
rs1218965221 1678 dbSNP
rs1407445355 1683 dbSNP
rs747628974 1688 dbSNP
rs565056149 1689 dbSNP
rs543684548 1690 dbSNP
rs908551573 1691 dbSNP
rs576403419 1697 dbSNP
rs1194102645 1698 dbSNP
rs1430404663 1700 dbSNP
rs1241315318 1701 dbSNP
rs1199268273 1702 dbSNP
rs1379351941 1705 dbSNP
rs1437418161 1711 dbSNP
rs1160001318 1713 dbSNP
rs955656807 1717 dbSNP
rs1457851531 1724 dbSNP
rs1292237187 1725 dbSNP
rs1393481545 1734 dbSNP
rs1308975994 1738 dbSNP
rs923105865 1738 dbSNP
rs1203082678 1744 dbSNP
rs1461757098 1751 dbSNP
rs1242503831 1753 dbSNP
rs976303173 1761 dbSNP
rs969940695 1762 dbSNP
rs1358757971 1769 dbSNP
rs1244015013 1770 dbSNP
rs1264920301 1776 dbSNP
rs1489409699 1785 dbSNP
rs547846869 1794 dbSNP
rs778589136 1798 dbSNP
rs964570394 1805 dbSNP
rs1237335585 1808 dbSNP
rs1017527304 1825 dbSNP
rs1011541508 1836 dbSNP
rs5798299 1839 dbSNP
rs1380395840 1842 dbSNP
rs1251549742 1844 dbSNP
rs1162068788 1847 dbSNP
rs1370763130 1852 dbSNP
rs1458865364 1859 dbSNP
rs956990321 1867 dbSNP
rs1398486906 1874 dbSNP
rs1229102271 1876 dbSNP
rs1332249938 1890 dbSNP
rs1031352052 1893 dbSNP
rs998588869 1900 dbSNP
rs1314922858 1915 dbSNP
rs915705821 1916 dbSNP
rs1313797648 1917 dbSNP
rs775837414 1918 dbSNP
rs754578766 1925 dbSNP
rs749695412 1931 dbSNP
rs780218159 1932 dbSNP
rs561241657 1934 dbSNP
rs1238466450 1941 dbSNP
rs1384272172 1942 dbSNP
rs1482718746 1949 dbSNP
rs1336647222 1958 dbSNP
rs1013492875 1962 dbSNP
rs756658289 1965 dbSNP
rs866892773 1968 dbSNP
rs1421972667 1976 dbSNP
rs1467549442 1978 dbSNP
rs1038549457 1983 dbSNP
rs941624615 1988 dbSNP
rs993496648 1992 dbSNP
rs1168747264 2007 dbSNP
rs1446086265 2009 dbSNP
rs963338362 2010 dbSNP
rs542221061 2011 dbSNP
rs1016542252 2013 dbSNP
rs559245481 2018 dbSNP
rs1305471331 2027 dbSNP
rs182009301 2028 dbSNP
rs563422842 2031 dbSNP
rs934032391 2050 dbSNP
rs889306539 2060 dbSNP
rs1273444208 2061 dbSNP
rs1311258772 2063 dbSNP
rs1183137847 2069 dbSNP
rs1445240849 2070 dbSNP
rs922666524 2075 dbSNP
rs1244907827 2079 dbSNP
rs975559889 2084 dbSNP
rs553561438 2090 dbSNP
rs1192265515 2094 dbSNP
rs1261715293 2096 dbSNP
rs529761536 2098 dbSNP
rs997938928 2119 dbSNP
rs1194928200 2122 dbSNP
rs900964105 2128 dbSNP
rs1424816197 2137 dbSNP
rs910391966 2138 dbSNP
rs1359844773 2155 dbSNP
rs1419214397 2162 dbSNP
rs1052849686 2163 dbSNP
rs543707942 2169 dbSNP
rs904169327 2170 dbSNP
rs1366585747 2196 dbSNP
rs1217150640 2200 dbSNP
rs189795255 2204 dbSNP
rs1042998190 2206 dbSNP
rs1303008458 2217 dbSNP
rs1348129621 2220 dbSNP
rs1437044287 2226 dbSNP
rs1251017612 2239 dbSNP
rs1197308089 2241 dbSNP
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rs1343717691 2246 dbSNP
rs957290264 2250 dbSNP
rs1031609313 2265 dbSNP
rs1439319386 2272 dbSNP
rs1156939063 2283 dbSNP
rs80140630 2288 dbSNP
rs915754302 2289 dbSNP
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rs992580128 2303 dbSNP
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rs751639070 2310 dbSNP
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rs1371365382 2325 dbSNP
rs558721628 2328 dbSNP
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rs963431623 2336 dbSNP
rs1024471720 2371 dbSNP
rs547260454 2373 dbSNP
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rs1289835941 2391 dbSNP
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rs74429986 4089 dbSNP
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rs1336506077 4198 dbSNP
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rs781769689 4225 dbSNP
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rs978358437 4293 dbSNP
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rs1305385714 4344 dbSNP
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rs1430458968 4390 dbSNP
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rs1394503207 4405 dbSNP
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rs1377173014 4418 dbSNP
rs952542064 4422 dbSNP
rs1288066591 4428 dbSNP
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rs1331098692 4435 dbSNP
rs539000688 4439 dbSNP
rs1281203278 4446 dbSNP
rs1231412864 4453 dbSNP
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rs371491025 4455 dbSNP
rs750209253 4465 dbSNP
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rs765249005 4505 dbSNP
rs777937918 4506 dbSNP
rs1302871377 4507 dbSNP
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