miRTarBase - #MIRT480935


—
pre-miRNA Information
pre-miRNA hsa-mir-4776-1   
Genomic Coordinates chr2: 212926257 - 212926336
Description Homo sapiens miR-4776-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4776-2   
Genomic Coordinates chr2: 212926257 - 212926336
Description Homo sapiens miR-4776-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4776-5p
Sequence 10| GUGGACCAGGAUGGCAAGGGCU |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs982906747 5 dbSNP
rs953060487 6 dbSNP
rs965980067 8 dbSNP
rs547466728 9 dbSNP
rs1269946481 12 dbSNP
rs1220781023 14 dbSNP
rs1350638372 18 dbSNP
rs1356074101 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol BBX   
Synonyms ARTC1, HBP2, HSPC339, MDS001
Description BBX, HMG-box containing
Transcript NM_001142568   
Other Transcripts NM_020235   
Expression
Putative miRNA Targets on BBX
3'UTR of BBX
(miRNA target sites are highlighted)		 
>BBX|NM_001142568|3'UTR
   1 AGCGCCCTTTCATTGTAAAACATTGTGCTTTACCTACTACCCTAGCCTTGTCTTTACCGAGGGATGCTAGTGAGTCCAAG
  81 TGGTGGAAAATATAGACTGCAAACAAGTGCTTGTTGCCCCACACGGCCCAGATTCACTTGAAGCAGAAGTTAGCATCCTG
 161 GGCCAGTTTGTTCTCTCAGAACCCAGAATCTTTGAGGGTAAGGTTATCTGTCTGATACTGAGCAGAAACAGAATGATCCT
 241 GGAGCTTTGCTTTCTATTGAAGGCTTTTGACGGTAATAGGTGGTAACTTGGTAAAAGGCTGCCTTTACTGTAGCTCACCC
 321 AGCATCTCTTTTACCAACCAGAGAGTGTGAAACTAGTTTCATATATTACCTAGTTATTCTTTCAAAACAAAACAAAAAAA
 401 AAACAAAAACTGACGCACTGCACTAGTTATTATTAGATATTCTTAGTCTTTTTTGTACATGGAGATTTAAGTTTAAGATG
 481 GTTTATATAATAGGTTATACCTACATTTATATTGTAGAATAAATATTAAAAAGCCTGTTCCAGAGACTCCCAAGCAGCCT
 561 GGGCAGGCAGATGTACCATTGTTAGTGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTTATATTTGCCACCA
 641 GAATGGTAGTTTGCTGGCAAAAAAAAAAAAAAAAGAGAGAGAGAAAAAATTACAACTCTTACAATCTGAATTTTTTTCTT
 721 AGCCTTGAGTGACCAAGAAGAATTTGCTTGAGGCAAATTGTGGCAAATATTTTCCCAGACAGGGGAAGAGTCCTGCAGAT
 801 TACAGATTACTGGTGTTTTCATGCCTTGAGGATTCTTTTATTTTTACATAGGGGTCTAAGTGACCAATGGATTGTTCATA
 881 CAAACAAAAAAAAAGACAAAAATATTATTCAGAAGTGACCTTAGTATTACTTCACTATTCTAAACACATTGAAGACACTC
 961 ACTTCATGTGGACTTGGAGCTACAGACCTTTTACATCCATCACAGATTGGCTGGACGGGTTGCAATTGCTATGCACAGCC
1041 TGATTGGCACTGCAGGTTTTTAGAGCCATTTTGAGTTTGTGTTGTTTAGGAGGTACTGAGTCAATGATGAGGGAGGTATG
1121 CCTGACCAGAGTGGGACTCTCAGTCATAGATCCACCTGCAAGTCTCTGTTTCCTTTTTGTGTTTTGTTGCTTTTGAACAT
1201 AAAACCAACCATACATAAGCAGCGCCAAGTGGATTAACTGGCTTAGAACATTCAACATATTGACTTAACCACCTGACATT
1281 CACAGTGTCTTGTTTCCTAGCAACAGATGCAAAGTGATAAATCAAAATTAGTCTGAGGCTACAGATTTTACAGGGTATTT
1361 GTTCTATAGCACAAAGTATTTCCCCACTCTTGCGTCACAGCACAAACTACCAAATTTTAATTATTGGATTCCAGCAATAA
1441 TTTTTAATGGTTTTCAAACTGGCGGAATTTTGACAGTGCTAGTTCGAGTTTGAAGCTTTTGAATTAGATCTCTAAATGGT
1521 GACAGTTTACATGGTTTTATCTAGCTTTCTTATTTATACTTGACTGAATTGTAATGATTTTTTTTCTAATTGTAATTTGA
1601 CGTAATAGCCATACAAAAAATGACTCTATTCATACTAGGTTTAGCTTCTCATGGTTGTAGATATTACTTCAGTTCCGGTG
1681 CTGGAAAATATGTACAACATACTAACAGGATTGAAAAAAAAATAGAGGTTTTTCTTCTTGTTTTTTTTTCCAAAGCAGGT
1761 AAAGAGGGTAGCAAAGCATCGGAATGATGTGCTCAAAAATGCATATTCCTGGTGGGGATGGAGGAAGAAGGCATTAGTAA
1841 AAGGTTAATCAAACGTTACAACTTAACCCCATTCATGTAGGAATAAATCAAGTGAGCAGTTCCAGACTTTTGCATAATAT
1921 TTTTACTATGATGCTGTTTTATTAATATTTTCTAAATTTCAAAACAAAAAGTGAATGTTTGAAATTGCTGGGTCCCGATG
2001 TTGGTGGCTGTTGGAGTTTTGGACCACTCGCTAGCAGTGATTTGAAGATTATAATTAGCTAAAATCCAAAACAAAAAACC
2081 AACAACAAAAATTGTATGGTGCGGAACATGCACCTTGACAATGGTACTAACTTGTTATTCTATAGAACACGTTAGAATAG
2161 ATCTATTTTTGCCAGAGCACCCTCCTTCAGTCCTCCGATTACATTTCACTAGAGTTCCTTACGAGATTGCTGTATATTCC
2241 TGGGACCTTTTTTAAAAAAAAAAAAAGCAAAACAAAAGATTACTTTTTTTCTATGTGATTAATATCTTACTTGATCTGCT
2321 TTTCCTAAACCTCAGTGGCTTTTCCCTTAGGCAGGGTTGGGGGTGGGAGGGCAACTTACTGGAGATGACTGTTTTCAGAT
2401 ACTTTAAAACAAACCTTTTTGTAGAAATGCTTAATTTTTAAGCGGTTAGGCACTGAGAGTAGCAGAAATCCTGCAAAGCT
2481 TTATAGTTCCTTAGACTCACCTTGTCGATTCTCTGAGTAAAGTCTTGATTTCAATAATTGTGCTTCTCATGCCCTGAAAC
2561 TGCTGGAGAGGAGTGTTGTTATTTTCAGGTAACAACATTCGTTAGCACAAATATTTCAGACCAATATTAGTGCTCTCCAC
2641 CCCACCTTTTGTTATCATTTTCATTTCATTTCTCTCATTCTTTTTTATTTTGGAAAATCATATTGCTATAGTGTGTACTT
2721 TAATCTGCCAGCAGATACCATCTACACTAACATTTGTCCCACAGCATCCTCAAGAGAAAAAGTTGTTGCACCTTATATAT
2801 ATCTCAAGCAAACCAAAATATGATGCTCTTCTGCTTTGTTTTATTCTAAATTGTTGTATCATATCTTTCTGAAACCATTC
2881 TGAATTTAGTTGAAATTATCAATATTTATGCTTTTAACCTTAATTTCTGGATTCAAGCCTGTATATAAATCTTTTGAAAA
2961 AAAATTGTCCTAGCCCTTCTCTGCGATGCTGGAAGTAGAAGATTGCGTCTCAGATGGAGACGCAGTACTGTTCCAGTTTT
3041 CTTTAGCCTTTTATTTATTTAGTTATTCTGGGTATTTCCTATGTAATTTTGAAGTGTGTAGAGTATATTATAGTAACTGA
3121 AGCTGCAGCTGTAAGAAGCTGAGTGAAAGAAAAAATACTGTAAGACATCCTTAAAGTTTTTATTTGTTTGGGTACTGTAT
3201 ATGAGATCAGGAAAAAGAAAAATGTCCCACAGCCACATTGGAAATACAGGTTCTTGTCCCCAAATTAGGTTAGTTCCCAG
3281 ATTTTAGATCAAAACTGTTAATTCATTAAAACCCCTTTTAAAAGGTAAATTCTACTGTTGTAATTCCGATAGTCTTTTTC
3361 CCACAAATATCAGAAATATATTTATTTAATTCTGTCAGATGAGCTTTCTACCGATGCCATGTCCCAAAGCCATGTTAAAA
3441 TAATTCCCACGTTATCATTGTGATTCTACTTCCTGCCACTAAAATTGCTGGAGAAACAAAATAATGATGGAACACTATGA
3521 ACAAAAAGGAGCATCTGAACTGGTCTGGTTATTTAGAATCCAATGTGTTCAAATCCTTTTGTTTTCTTATTAAGTCAGAT
3601 GCTACTGTAAGTCAGATAAAATTTTGTTTGCACTCTGCAGTCTTTGGCTCAATGTATGGAAATGTTTGCACCTATGTAAA
3681 GTCACAAGCTAATTACAAATTGCTACAGAACAGGAGTAAGCTGAAAACTGAATGCCATGTTTTGTTTATAAGGTGGGGAG
3761 GGGAGGGAAAATACCAAAAAACTCTGTTCCAAGTTTGGCATTTGACATTAATGTGAAGCAGTGGGACCATGCTGCCTGCT
3841 AAACTACTGTATGAATCGTAAATGTTCTGAAGACGAGCAGCTGGAGGCTGGAGGATGGCATTCCATACAGCAAAGGAGAA
3921 GCACCCACCACTTCATCTGGGAAAAGGAAGGAAATTGCAGGAGGCCTGGAGCCATCATTTGTAAAGGGGATGTTGCGGGG
4001 TGTGATGCTGTTGAGGAGATTCACCTTCAATTGCACTGCTCCACAGAGCCCTCATATAAGGCCAATCCTAATGGGCTACC
4081 TCGGCTTTAAAAGTTAATTTCAGTAAGTCCTGTTTCAAAAGTTTGTCTTTTTTTGCTTCTACCTTCAGTGCCACTATTTT
4161 CCACTGCAGTGTTTTGACTTCACAAACTGCCTCCTCCAGAGAGAACAATGTATTGCTGAAAATGGGCAGTAGAAGCAAAT
4241 GCTGTTGTTACATTTGACCTATAAAGTATTCAGAGTGACTGCTAGGTAGAAATTAAAACTTAGCTTTCCCAAATAGCTCC
4321 TTATTTTGCACCTTATAAAAAGTATACTAATTGTTAATTAGATGTTGCTTTTGTTTATACAAGCATTCCCAAAGAACTAG
4401 ATTTGGATTTTGTTTTGAGTTTTTGGATTTTTAAAAATTATCTTATTTAGATTGACTAACAGCATACTTACAATTTTAAA
4481 AGAAGCTGTTGTTCAGTTCATCTTACCAGATGTGTCTGGCGAAGTATTCAGGGTTTGATGGACTGCTTTACTTTCGTTTG
4561 GAAGTGATAGCTAAGTTTATTATACTCTATATTAAACAACTTTGTTCATTTCACTGAGGACCTTATCTTCCTTATATTTC
4641 AGAACAAAGAAGCAACAAGCGTGAATAAAAAGACAAATGTATTTGACTCCCTCATAATCCCCATCTGTATGTGCTACCCT
4721 TCCTTCAAATATATAAATGTGCATCTTTTTTTTAAAAAAAAAAAAAAAAAAGGTTCCTCTTCTGGCCAAATTTGATCTAT
4801 GGTGGTATGATTCATACTGTTAAATTGAGAGAGGAAACCTTGTGGTTAAAAATTATATGGCTGCTGTTTTCTTTTTGCAG
4881 TCAGTGGTCAAAACTGATCATGTGCTTAAATCGATTTTTATGCACAGAACTAGTTATTGTGAACATTACTGCTCCCTCCA
4961 AAGATTTCCTGATAACTTGGGCCAGAGGTGGTTACTGAGTAACAAGGATCTAATTCAATGCCTCAAAACTCTTCCACCCA
5041 CAATGCAAATCTTACCTCACAAGCTCTAACCTAAATCACAGAGACATGCATGTTTCATGCATTAACACTGATTTCGCTCT
5121 GTGGCCCACCAGAGGGGTGGGCTCATGTCCCCTGACTCCTCACATGAGTGCCTCAGCTCTAAGAGCCGTGGAACGGGGGG
5201 TAGGGAAGGTTTGCGATCTGGAGCTCAGCAACTGGCTCAGCAACGTTTTCTCCATTTCATTAGCACTAAACAAGTCTCTT
5281 GCTCTCAGGAATTTGTCAGAAAAAAGAATAAAATCACCTGAGACTCCACATACCAGATTATAAACTCTTCTCGTAGGTTT
5361 GAATTGCTTACTCACATGTCATAAATTAACCACAGCTTCATTTGACCACCAGGTCTAAAGTCTGTTGACAGTTTCAGCAT
5441 GACTGAATCGCTCATTTTTTTTTTTTGCTTTCAGAAATTGGCTTGGTTCTCTTTAGAGTTGGTGTAAACATGCCATGTAA
5521 TAAATGATTTCCACTTAATGGTACAACAGAATTATTGCTTTCTTAGATGTATGTGTAGTAAAAGTCAATATACACATTTA
5601 TATAATTTCTTTCTTCAAAATCTTATACCTAATTTGATATTTCTAAAAATTGCACATGTAAGTCATGTGTATAACATGCT
5681 AAAGTACTTTAACTGTGATCTTAAAACTGAATAAAAATATTTAATAAAACTTTGAAATATTTTAAAGATATTATTCAAAT
5761 ATATTTCTTTATGTTCACACTACTGGCCGTAGAGTATGTGCCTTTAATGTACCATTTTCACTAAAAACAGTAGGAAAAAT
5841 ACTAATAAAAGTAAGATATTTCAACTATTTTAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucggGAACGGUAGGACCAGGUg 5'
              || | | || ||||||| 
Target 5' tatgCTCGGCCTCGTGGTCCAt 3'
 591 - 612 158.00 -23.00
2 
miRNA  3' ucgggAACGGUAGGACCAGGUg 5'
               ||  |||||||| ||| 
Target 5' agaagTTAGCATCCTGGGCCAg 3'
 145 - 166 137.00 -17.90
3 
miRNA  3' ucGGGAACGGUAGGACCAGGUg 5'
            |: |||  :|::||| ||| 
Target 5' ggCTGTTGGAGTTTTGGACCAc 3'
 2006 - 2027 128.00 -19.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26967706 4 COSMIC
COSN2375787 5 COSMIC
COSN30181609 8 COSMIC
COSN30189316 16 COSMIC
COSN30537522 20 COSMIC
COSN26967707 27 COSMIC
COSN31589926 29 COSMIC
COSN14019931 35 COSMIC
COSN31588559 47 COSMIC
COSN30694398 59 COSMIC
COSN31505051 67 COSMIC
COSN14019933 92 COSMIC
COSN30498237 98 COSMIC
COSN14019936 125 COSMIC
COSN16630635 185 COSMIC
COSN30163269 206 COSMIC
COSN1264791 221 COSMIC
COSN30161621 349 COSMIC
COSN6743193 558 COSMIC
COSN20098812 674 COSMIC
COSN9109985 724 COSMIC
COSN29706240 895 COSMIC
COSN1264792 1540 COSMIC
COSN20098818 1586 COSMIC
COSN27100886 1677 COSMIC
COSN27198317 2267 COSMIC
COSN27204084 2267 COSMIC
COSN28968613 2307 COSMIC
COSN24480929 2554 COSMIC
COSN15002631 2579 COSMIC
COSN24573151 2857 COSMIC
COSN16804717 3003 COSMIC
COSN31962114 3023 COSMIC
COSN15670775 3527 COSMIC
COSN1905066 3568 COSMIC
COSN15344404 4318 COSMIC
COSN29074885 4754 COSMIC
COSN25825562 4755 COSMIC
COSN7551315 4758 COSMIC
COSN20098819 4772 COSMIC
COSN17037911 4780 COSMIC
COSN6743194 4936 COSMIC
COSN27783451 4961 COSMIC
COSN1905067 5132 COSMIC
COSN22368615 5307 COSMIC
COSN20098821 5467 COSMIC
COSN27552949 5467 COSMIC
COSN9733324 5581 COSMIC
COSN23074438 5610 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs767657531 5 dbSNP
rs935660356 6 dbSNP
rs750705038 8 dbSNP
rs761088654 13 dbSNP
rs374191573 14 dbSNP
rs766916566 15 dbSNP
rs1310037060 16 dbSNP
rs754383679 23 dbSNP
rs755551051 24 dbSNP
rs377318003 25 dbSNP
rs752176924 28 dbSNP
rs757978077 31 dbSNP
rs1289626154 34 dbSNP
rs777262836 39 dbSNP
rs746733747 41 dbSNP
rs1271987136 42 dbSNP
rs770703152 46 dbSNP
rs1210947373 47 dbSNP
rs368136279 48 dbSNP
rs745738875 50 dbSNP
rs772955903 51 dbSNP
rs1026476494 57 dbSNP
rs747840115 57 dbSNP
rs1008760706 59 dbSNP
rs769651500 60 dbSNP
rs1322508217 65 dbSNP
rs897622956 71 dbSNP
rs1419993846 73 dbSNP
rs774442142 75 dbSNP
rs950990123 77 dbSNP
rs761774802 80 dbSNP
rs1429260382 81 dbSNP
rs772232788 88 dbSNP
rs773300644 92 dbSNP
rs761035501 93 dbSNP
rs766788580 94 dbSNP
rs754258942 97 dbSNP
rs760078506 98 dbSNP
rs1430912264 100 dbSNP
rs1390341296 102 dbSNP
rs1334334761 104 dbSNP
rs540035619 105 dbSNP
rs560338571 113 dbSNP
rs529162732 119 dbSNP
rs113819387 120 dbSNP
rs112846938 124 dbSNP
rs549288918 125 dbSNP
rs765995758 126 dbSNP
rs13098250 132 dbSNP
rs1217862827 146 dbSNP
rs1419515400 150 dbSNP
rs920952730 154 dbSNP
rs1486918119 157 dbSNP
rs1002595068 158 dbSNP
rs955137918 160 dbSNP
rs1263464515 165 dbSNP
rs568444343 171 dbSNP
rs1033796430 176 dbSNP
rs535638486 179 dbSNP
rs13098404 180 dbSNP
rs1214619255 181 dbSNP
rs562318752 197 dbSNP
rs1366676758 204 dbSNP
rs1312312962 215 dbSNP
rs945171137 216 dbSNP
rs1406440194 226 dbSNP
rs1043593196 229 dbSNP
rs531347853 234 dbSNP
rs1354442176 255 dbSNP
rs114684557 258 dbSNP
rs1451916599 263 dbSNP
rs571365017 271 dbSNP
rs1021137765 272 dbSNP
rs557172965 273 dbSNP
rs1445450379 302 dbSNP
rs1245271963 309 dbSNP
rs979717337 327 dbSNP
rs1183348007 329 dbSNP
rs925526214 330 dbSNP
rs1476244046 348 dbSNP
rs1189305291 356 dbSNP
rs1250567365 362 dbSNP
rs935703787 364 dbSNP
rs1055119062 366 dbSNP
rs1344230180 370 dbSNP
rs1423986282 373 dbSNP
rs1433476016 381 dbSNP
rs75895763 384 dbSNP
rs986188496 386 dbSNP
rs375989587 388 dbSNP
rs1013670568 389 dbSNP
rs1418564164 389 dbSNP
rs1299106264 390 dbSNP
rs1048239047 393 dbSNP
rs1221003328 394 dbSNP
rs1370390926 394 dbSNP
rs371126502 394 dbSNP
rs74799691 394 dbSNP
rs886532321 394 dbSNP
rs1179855016 397 dbSNP
rs1006315465 399 dbSNP
rs910191828 404 dbSNP
rs1266739799 405 dbSNP
rs28683589 406 dbSNP
rs1221068706 408 dbSNP
rs1027981669 413 dbSNP
rs142914902 415 dbSNP
rs765102916 416 dbSNP
rs1274703238 418 dbSNP
rs1315984751 419 dbSNP
rs913613950 420 dbSNP
rs966505923 424 dbSNP
rs1344137282 435 dbSNP
rs1303132233 438 dbSNP
rs1406110867 438 dbSNP
rs1392916321 440 dbSNP
rs1156896824 443 dbSNP
rs979241345 453 dbSNP
rs1364669271 456 dbSNP
rs1307358243 459 dbSNP
rs925139115 460 dbSNP
rs1473481193 461 dbSNP
rs1426970069 462 dbSNP
rs1353030059 466 dbSNP
rs937906448 471 dbSNP
rs1217469334 477 dbSNP
rs386664393 493 dbSNP
rs1055088151 500 dbSNP
rs1268771632 506 dbSNP
rs745876622 524 dbSNP
rs1202910602 526 dbSNP
rs568931448 527 dbSNP
rs929139500 529 dbSNP
rs147395680 530 dbSNP
rs567881587 534 dbSNP
rs1283073966 535 dbSNP
rs1245965861 552 dbSNP
rs1002097013 554 dbSNP
rs1034112961 558 dbSNP
rs1316310594 559 dbSNP
rs536521823 564 dbSNP
rs1385923279 568 dbSNP
rs1438488192 570 dbSNP
rs896448416 571 dbSNP
rs752637609 574 dbSNP
rs1047734574 577 dbSNP
rs886497275 580 dbSNP
rs942140743 583 dbSNP
rs1013686475 589 dbSNP
rs1037820811 590 dbSNP
rs758432910 593 dbSNP
rs556832288 598 dbSNP
rs1210156989 599 dbSNP
rs966910225 602 dbSNP
rs138143605 604 dbSNP
rs1350764407 605 dbSNP
rs979578279 610 dbSNP
rs1268985139 612 dbSNP
rs867073199 618 dbSNP
rs1227378243 623 dbSNP
rs771828509 624 dbSNP
rs14625 625 dbSNP
rs1450650699 627 dbSNP
rs1405704129 631 dbSNP
rs1329508240 633 dbSNP
rs1414864008 636 dbSNP
rs1404237180 637 dbSNP
rs1166038327 644 dbSNP
rs1461444639 645 dbSNP
rs1390180639 653 dbSNP
rs1376505440 655 dbSNP
rs1189953697 657 dbSNP
rs1442375702 658 dbSNP
rs368890895 658 dbSNP
rs776924140 658 dbSNP
rs1271368642 659 dbSNP
rs1343516968 659 dbSNP
rs397990745 659 dbSNP
rs536272413 659 dbSNP
rs60360146 659 dbSNP
rs74356583 659 dbSNP
rs747339489 659 dbSNP
rs765461950 659 dbSNP
rs781617751 659 dbSNP
rs1276849654 661 dbSNP
rs1032624741 669 dbSNP
rs1382268667 670 dbSNP
rs1316053479 671 dbSNP
rs1450491208 672 dbSNP
rs558755553 672 dbSNP
rs1326607997 673 dbSNP
rs1491453234 674 dbSNP
rs73212055 674 dbSNP
rs1289061208 675 dbSNP
rs1030959848 676 dbSNP
rs954456281 678 dbSNP
rs985708028 682 dbSNP
rs576233507 684 dbSNP
rs1163440951 686 dbSNP
rs1008286173 690 dbSNP
rs1020642623 696 dbSNP
rs1215358694 713 dbSNP
rs944368250 714 dbSNP
rs1181616269 718 dbSNP
rs1235953595 720 dbSNP
rs777242038 724 dbSNP
rs1254642947 728 dbSNP
rs1220319791 731 dbSNP
rs35039143 738 dbSNP
rs1457095207 742 dbSNP
rs1178702356 747 dbSNP
rs777854216 749 dbSNP
rs1358756189 754 dbSNP
rs76251161 757 dbSNP
rs979211926 761 dbSNP
rs1471526478 774 dbSNP
rs192193445 781 dbSNP
rs184703038 786 dbSNP
rs887593328 788 dbSNP
rs1032178017 796 dbSNP
rs1415190337 803 dbSNP
rs959156119 805 dbSNP
rs1406729407 820 dbSNP
rs541551620 833 dbSNP
rs937926996 848 dbSNP
rs1463325646 852 dbSNP
rs990678214 855 dbSNP
rs560069337 862 dbSNP
rs1055019081 870 dbSNP
rs1399825826 873 dbSNP
rs1447867545 880 dbSNP
rs1331141144 882 dbSNP
rs1247305458 886 dbSNP
rs1445489756 886 dbSNP
rs201572640 886 dbSNP
rs1283872318 890 dbSNP
rs896524343 894 dbSNP
rs1329553947 895 dbSNP
rs1289988418 898 dbSNP
rs1366900274 916 dbSNP
rs983837196 922 dbSNP
rs907896386 923 dbSNP
rs1447432377 925 dbSNP
rs1343048326 934 dbSNP
rs1013591722 938 dbSNP
rs1317134410 939 dbSNP
rs1283474325 940 dbSNP
rs868500414 949 dbSNP
rs1391201291 951 dbSNP
rs189984984 958 dbSNP
rs1021076936 961 dbSNP
rs902587451 969 dbSNP
rs557843800 980 dbSNP
rs542521299 993 dbSNP
rs1474440785 998 dbSNP
rs1255983010 999 dbSNP
rs932117812 1006 dbSNP
rs1317083754 1011 dbSNP
rs1195955088 1016 dbSNP
rs74900719 1017 dbSNP
rs757474628 1018 dbSNP
rs1440151439 1020 dbSNP
rs954200728 1026 dbSNP
rs890685433 1028 dbSNP
rs781339238 1029 dbSNP
rs1476513422 1032 dbSNP
rs1010516524 1042 dbSNP
rs1021033193 1045 dbSNP
rs1423280775 1046 dbSNP
rs1435287210 1048 dbSNP
rs112245955 1051 dbSNP
rs373744750 1051 dbSNP
rs1335134366 1059 dbSNP
rs1019860929 1063 dbSNP
rs965707784 1082 dbSNP
rs746234088 1088 dbSNP
rs1000538814 1094 dbSNP
rs182505530 1096 dbSNP
rs1418821885 1101 dbSNP
rs975705127 1101 dbSNP
rs750443581 1103 dbSNP
rs1334977455 1105 dbSNP
rs1451559960 1112 dbSNP
rs918892218 1119 dbSNP
rs959122227 1120 dbSNP
rs550385716 1121 dbSNP
rs1256396806 1128 dbSNP
rs1212063881 1139 dbSNP
rs1305703100 1142 dbSNP
rs1273266398 1144 dbSNP
rs984516884 1152 dbSNP
rs909048391 1154 dbSNP
rs1024831050 1157 dbSNP
rs1228587571 1158 dbSNP
rs971036629 1164 dbSNP
rs983421937 1167 dbSNP
rs185503694 1169 dbSNP
rs564913565 1191 dbSNP
rs1252681713 1200 dbSNP
rs149582151 1208 dbSNP
rs1065672 1209 dbSNP
rs1065673 1210 dbSNP
rs932108997 1212 dbSNP
rs1055493188 1213 dbSNP
rs547495794 1216 dbSNP
rs1280489302 1224 dbSNP
rs917823947 1225 dbSNP
rs1164294160 1236 dbSNP
rs1424616853 1246 dbSNP
rs1041934980 1248 dbSNP
rs904786622 1255 dbSNP
rs1214999544 1256 dbSNP
rs144308910 1257 dbSNP
rs1429432886 1258 dbSNP
rs1053464728 1270 dbSNP
rs894875825 1271 dbSNP
rs530326172 1272 dbSNP
rs1288968531 1277 dbSNP
rs1391260874 1279 dbSNP
rs776641337 1280 dbSNP
rs1012025571 1281 dbSNP
rs1315267114 1283 dbSNP
rs1042425492 1287 dbSNP
rs1222468648 1287 dbSNP
rs1350391471 1288 dbSNP
rs902492998 1299 dbSNP
rs1309119711 1301 dbSNP
rs1412256581 1304 dbSNP
rs1025219402 1324 dbSNP
rs1001361852 1325 dbSNP
rs189536691 1338 dbSNP
rs1053866277 1343 dbSNP
rs570010467 1344 dbSNP
rs1458587505 1346 dbSNP
rs1477860860 1350 dbSNP
rs970626016 1353 dbSNP
rs796076496 1355 dbSNP
rs1005125582 1356 dbSNP
rs889989663 1358 dbSNP
rs1410983680 1360 dbSNP
rs780638783 1364 dbSNP
rs115679898 1367 dbSNP
rs1484003996 1375 dbSNP
rs1266135706 1378 dbSNP
rs558515261 1379 dbSNP
rs565768192 1394 dbSNP
rs534781951 1395 dbSNP
rs1266895836 1398 dbSNP
rs1213244057 1399 dbSNP
rs570673409 1402 dbSNP
rs1417973939 1415 dbSNP
rs973358035 1427 dbSNP
rs921965396 1432 dbSNP
rs1300670614 1434 dbSNP
rs1387465450 1435 dbSNP
rs1393117452 1451 dbSNP
rs953580935 1458 dbSNP
rs1456942584 1460 dbSNP
rs539240765 1464 dbSNP
rs759459901 1465 dbSNP
rs911968684 1466 dbSNP
rs1375898490 1469 dbSNP
rs1197526931 1472 dbSNP
rs142250309 1486 dbSNP
rs1025938731 1487 dbSNP
rs950352015 1493 dbSNP
rs1206368064 1511 dbSNP
rs368257110 1516 dbSNP
rs1297546095 1519 dbSNP
rs1269144755 1522 dbSNP
rs1424101889 1525 dbSNP
rs1041923872 1532 dbSNP
rs1321994411 1534 dbSNP
rs1231999385 1537 dbSNP
rs926167469 1538 dbSNP
rs1234631038 1544 dbSNP
rs1332864172 1553 dbSNP
rs749839504 1557 dbSNP
rs771658986 1565 dbSNP
rs959492200 1570 dbSNP
rs55828749 1578 dbSNP
rs796107251 1578 dbSNP
rs1399829851 1591 dbSNP
rs1012405972 1597 dbSNP
rs542807892 1602 dbSNP
rs990655404 1603 dbSNP
rs1186186569 1612 dbSNP
rs1448492536 1614 dbSNP
rs556440854 1625 dbSNP
rs1046108224 1626 dbSNP
rs1190882226 1627 dbSNP
rs772755948 1629 dbSNP
rs180675190 1633 dbSNP
rs1255938148 1653 dbSNP
rs917730557 1657 dbSNP
rs751997002 1659 dbSNP
rs949302555 1662 dbSNP
rs185495812 1677 dbSNP
rs923947427 1678 dbSNP
rs56723751 1693 dbSNP
rs555675808 1697 dbSNP
rs1028948513 1705 dbSNP
rs1437886312 1707 dbSNP
rs1158167837 1709 dbSNP
rs1379615077 1710 dbSNP
rs1454303094 1712 dbSNP
rs1290570941 1713 dbSNP
rs1053470 1714 dbSNP
rs1393220164 1714 dbSNP
rs1396520522 1714 dbSNP
rs1388222198 1724 dbSNP
rs1428597679 1726 dbSNP
rs1386036546 1729 dbSNP
rs1053471 1730 dbSNP
rs1317854393 1732 dbSNP
rs987886012 1738 dbSNP
rs1053473 1740 dbSNP
rs1307981395 1741 dbSNP
rs775359150 1744 dbSNP
rs1205107447 1750 dbSNP
rs190254190 1750 dbSNP
rs1483402516 1751 dbSNP
rs1276873021 1755 dbSNP
rs1264233798 1769 dbSNP
rs901309968 1781 dbSNP
rs1214764173 1782 dbSNP
rs994386123 1791 dbSNP
rs1283374671 1799 dbSNP
rs1025845668 1804 dbSNP
rs13077388 1809 dbSNP
rs1306054918 1810 dbSNP
rs936228903 1812 dbSNP
rs1370561984 1818 dbSNP
rs181189090 1824 dbSNP
rs1016456489 1826 dbSNP
rs751656757 1832 dbSNP
rs1412672522 1834 dbSNP
rs1420958194 1835 dbSNP
rs550341220 1844 dbSNP
rs187079728 1853 dbSNP
rs1024818626 1855 dbSNP
rs970516820 1856 dbSNP
rs1254056550 1862 dbSNP
rs978041569 1872 dbSNP
rs1451219067 1877 dbSNP
rs13938 1879 dbSNP
rs146309910 1882 dbSNP
rs940473881 1892 dbSNP
rs1227650692 1893 dbSNP
rs1036146409 1894 dbSNP
rs989507248 1897 dbSNP
rs911190127 1901 dbSNP
rs750632326 1908 dbSNP
rs899044226 1911 dbSNP
rs1433740456 1921 dbSNP
rs1348819152 1925 dbSNP
rs994633499 1929 dbSNP
rs1392649151 1934 dbSNP
rs1311180771 1942 dbSNP
rs1340445976 1943 dbSNP
rs1386843050 1943 dbSNP
rs139741012 1945 dbSNP
rs1473200404 1965 dbSNP
rs889046827 1976 dbSNP
rs1189524637 1983 dbSNP
rs144547334 1988 dbSNP
rs901383523 1997 dbSNP
rs767718268 1998 dbSNP
rs1198168927 2008 dbSNP
rs1265991263 2011 dbSNP
rs967472844 2018 dbSNP
rs191512346 2030 dbSNP
rs1047326609 2031 dbSNP
rs868165993 2038 dbSNP
rs1217437565 2043 dbSNP
rs888691649 2052 dbSNP
rs1366211251 2057 dbSNP
rs1274944747 2073 dbSNP
rs1442635760 2080 dbSNP
rs1006188977 2084 dbSNP
rs13077787 2086 dbSNP
rs1362675139 2089 dbSNP
rs1320266300 2094 dbSNP
rs1458137285 2095 dbSNP
rs1015952275 2097 dbSNP
rs1180239066 2099 dbSNP
rs894766478 2103 dbSNP
rs543939212 2104 dbSNP
rs1024724084 2105 dbSNP
rs1033173810 2106 dbSNP
rs1189482411 2114 dbSNP
rs1465149838 2115 dbSNP
rs1243640624 2130 dbSNP
rs1207864582 2138 dbSNP
rs1311595946 2139 dbSNP
rs970570989 2147 dbSNP
rs1235901522 2151 dbSNP
rs554716746 2152 dbSNP
rs1296352218 2155 dbSNP
rs957486483 2161 dbSNP
rs568535420 2166 dbSNP
rs1031220904 2167 dbSNP
rs1447928528 2172 dbSNP
rs1360316162 2173 dbSNP
rs991662386 2177 dbSNP
rs115355673 2178 dbSNP
rs1419685564 2180 dbSNP
rs146600320 2181 dbSNP
rs950367159 2197 dbSNP
rs989764788 2198 dbSNP
rs911233047 2203 dbSNP
rs576332400 2210 dbSNP
rs545294195 2217 dbSNP
rs558906137 2218 dbSNP
rs940442838 2219 dbSNP
rs139932152 2223 dbSNP
rs1212959194 2224 dbSNP
rs756503648 2229 dbSNP
rs1415877984 2241 dbSNP
rs1295665276 2246 dbSNP
rs114005399 2247 dbSNP
rs564629753 2248 dbSNP
rs1218428174 2253 dbSNP
rs1050706869 2254 dbSNP
rs1228160939 2254 dbSNP
rs560763449 2254 dbSNP
rs397839832 2255 dbSNP
rs1369966445 2256 dbSNP
rs922671961 2280 dbSNP
rs1463721138 2284 dbSNP
rs1348402527 2285 dbSNP
rs543143921 2287 dbSNP
rs930173714 2292 dbSNP
rs1047233306 2294 dbSNP
rs888591180 2296 dbSNP
rs528457058 2298 dbSNP
rs941625678 2299 dbSNP
rs1250405303 2301 dbSNP
rs1205334563 2305 dbSNP
rs1481392766 2306 dbSNP
rs1263266067 2311 dbSNP
rs1259559355 2312 dbSNP
rs1056417376 2313 dbSNP
rs75244590 2319 dbSNP
rs78943654 2320 dbSNP
rs1295516046 2334 dbSNP
rs1419788117 2334 dbSNP
rs1429996303 2335 dbSNP
rs1033059347 2346 dbSNP
rs34580445 2350 dbSNP
rs766595821 2350 dbSNP
rs1374258925 2353 dbSNP
rs1393268807 2363 dbSNP
rs1434827954 2364 dbSNP
rs1315294701 2370 dbSNP
rs563514934 2373 dbSNP
rs1293115039 2386 dbSNP
rs1013066165 2390 dbSNP
rs1011898952 2392 dbSNP
rs1046206575 2413 dbSNP
rs1166898761 2416 dbSNP
rs1364332451 2418 dbSNP
rs1217630365 2420 dbSNP
rs1300853024 2421 dbSNP
rs1411203201 2423 dbSNP
rs1348621540 2431 dbSNP
rs1182466604 2434 dbSNP
rs906292786 2444 dbSNP
rs1236655339 2445 dbSNP
rs780583948 2463 dbSNP
rs544737733 2479 dbSNP
rs971665499 2481 dbSNP
rs982141016 2482 dbSNP
rs1488638102 2491 dbSNP
rs1275441507 2492 dbSNP
rs1207274631 2501 dbSNP
rs754461487 2503 dbSNP
rs1487307113 2507 dbSNP
rs184106070 2508 dbSNP
rs757823911 2512 dbSNP
rs961656745 2519 dbSNP
rs552415015 2535 dbSNP
rs1010856758 2537 dbSNP
rs1018605401 2539 dbSNP
rs1454313220 2540 dbSNP
rs1175016536 2547 dbSNP
rs2399214 2560 dbSNP
rs1159008603 2561 dbSNP
rs1400695911 2569 dbSNP
rs1370236112 2572 dbSNP
rs930420715 2577 dbSNP
rs1174828991 2584 dbSNP
rs755510001 2595 dbSNP
rs1254551903 2601 dbSNP
rs1347250263 2602 dbSNP
rs1434800509 2608 dbSNP
rs910408834 2612 dbSNP
rs1262868281 2617 dbSNP
rs528829079 2620 dbSNP
rs188669468 2625 dbSNP
rs568396395 2627 dbSNP
rs982793143 2631 dbSNP
rs1234103835 2632 dbSNP
rs910060827 2633 dbSNP
rs1295629908 2646 dbSNP
rs1227950151 2658 dbSNP
rs941519636 2663 dbSNP
rs1056090794 2672 dbSNP
rs1307250257 2677 dbSNP
rs1383850104 2688 dbSNP
rs1400036273 2688 dbSNP
rs537530986 2701 dbSNP
rs916134265 2704 dbSNP
rs950249502 2705 dbSNP
rs1396391005 2711 dbSNP
rs1046113596 2712 dbSNP
rs778615309 2716 dbSNP
rs1054478193 2719 dbSNP
rs1284912363 2722 dbSNP
rs149902789 2728 dbSNP
rs569831519 2731 dbSNP
rs893207648 2741 dbSNP
rs1212253401 2744 dbSNP
rs1013452209 2747 dbSNP
rs746514194 2748 dbSNP
rs538839961 2750 dbSNP
rs144927174 2752 dbSNP
rs1016232674 2755 dbSNP
rs1229405713 2757 dbSNP
rs866258364 2771 dbSNP
rs1338513589 2783 dbSNP
rs1468692792 2786 dbSNP
rs770353773 2792 dbSNP
rs1415324715 2798 dbSNP
rs752276578 2805 dbSNP
rs1011139469 2820 dbSNP
rs572295820 2833 dbSNP
rs1018220749 2842 dbSNP
rs866843876 2847 dbSNP
rs1194942481 2854 dbSNP
rs1235765177 2855 dbSNP
rs776308346 2856 dbSNP
rs1469185581 2859 dbSNP
rs971689400 2862 dbSNP
rs1029623204 2865 dbSNP
rs1189197087 2881 dbSNP
rs1476506969 2883 dbSNP
rs1249710902 2885 dbSNP
rs1204578570 2890 dbSNP
rs1438590179 2893 dbSNP
rs1410865680 2894 dbSNP
rs534645942 2895 dbSNP
rs1403923399 2898 dbSNP
rs982923458 2900 dbSNP
rs1353908926 2902 dbSNP
rs909956282 2903 dbSNP
rs1395479935 2907 dbSNP
rs962937997 2909 dbSNP
rs371466807 2932 dbSNP
rs1285873221 2958 dbSNP
rs1408739020 2967 dbSNP
rs992078687 2968 dbSNP
rs1335855187 2972 dbSNP
rs12637515 2974 dbSNP
rs757803727 2976 dbSNP
rs1166188308 2980 dbSNP
rs1463449360 2982 dbSNP
rs1410465391 2986 dbSNP
rs745542369 3003 dbSNP
rs1182122468 3004 dbSNP
rs562035117 3007 dbSNP
rs1329572042 3008 dbSNP
rs1196949526 3015 dbSNP
rs910303060 3022 dbSNP
rs944503137 3023 dbSNP
rs927648409 3024 dbSNP
rs574373716 3031 dbSNP
rs189862821 3033 dbSNP
rs375789394 3037 dbSNP
rs1266115083 3039 dbSNP
rs1223179531 3044 dbSNP
rs1052213263 3047 dbSNP
rs1350683466 3048 dbSNP
rs1280841757 3050 dbSNP
rs934587839 3057 dbSNP
rs1330191252 3059 dbSNP
rs529591593 3066 dbSNP
rs1375491461 3067 dbSNP
rs893534553 3082 dbSNP
rs1386942603 3089 dbSNP
rs769486236 3090 dbSNP
rs1231219851 3096 dbSNP
rs1272378140 3097 dbSNP
rs1401813950 3099 dbSNP
rs1410240396 3099 dbSNP
rs1170964538 3100 dbSNP
rs1039961560 3103 dbSNP
rs1335249375 3108 dbSNP
rs899637007 3111 dbSNP
rs1253923713 3115 dbSNP
rs998068734 3144 dbSNP
rs1195759478 3159 dbSNP
rs1029528475 3161 dbSNP
rs1469617895 3170 dbSNP
rs1215102115 3171 dbSNP
rs1214968589 3179 dbSNP
rs1255793490 3183 dbSNP
rs546370476 3183 dbSNP
rs543081068 3193 dbSNP
rs563055076 3198 dbSNP
rs1181955485 3202 dbSNP
rs576974334 3213 dbSNP
rs1472130176 3214 dbSNP
rs1236040844 3218 dbSNP
rs775238131 3237 dbSNP
rs1363392216 3238 dbSNP
rs1288718718 3242 dbSNP
rs1044841348 3250 dbSNP
rs545982102 3254 dbSNP
rs1463376482 3256 dbSNP
rs963136373 3264 dbSNP
rs868840426 3268 dbSNP
rs1332251128 3278 dbSNP
rs1413931866 3285 dbSNP
rs1395804115 3288 dbSNP
rs9831296 3293 dbSNP
rs1015740459 3295 dbSNP
rs34790112 3299 dbSNP
rs897401015 3313 dbSNP
rs1410569757 3316 dbSNP
rs34550668 3316 dbSNP
rs1185755743 3327 dbSNP
rs1475687043 3338 dbSNP
rs995751799 3342 dbSNP
rs114322545 3343 dbSNP
rs1356197672 3346 dbSNP
rs971547007 3348 dbSNP
rs981729573 3349 dbSNP
rs1212567904 3350 dbSNP
rs1292604801 3355 dbSNP
rs182125167 3369 dbSNP
rs780847838 3370 dbSNP
rs1017742354 3379 dbSNP
rs1364554169 3380 dbSNP
rs965840030 3399 dbSNP
rs540037642 3410 dbSNP
rs935041985 3411 dbSNP
rs988226742 3413 dbSNP
rs548628933 3414 dbSNP
rs1322280908 3416 dbSNP
rs1314918371 3418 dbSNP
rs562086480 3420 dbSNP
rs946461695 3432 dbSNP
rs1484405867 3435 dbSNP
rs774171389 3449 dbSNP
rs1354215548 3450 dbSNP
rs1039424332 3451 dbSNP
rs899712276 3452 dbSNP
rs1179983479 3454 dbSNP
rs1474871132 3455 dbSNP
rs1257602885 3458 dbSNP
rs137982705 3462 dbSNP
rs1189499248 3464 dbSNP
rs1318958995 3472 dbSNP
rs1056662 3477 dbSNP
rs761882659 3482 dbSNP
rs530942390 3498 dbSNP
rs1309564881 3500 dbSNP
rs1050990345 3511 dbSNP
rs1288185803 3515 dbSNP
rs1233196559 3518 dbSNP
rs1356704197 3529 dbSNP
rs1295179838 3530 dbSNP
rs887037558 3532 dbSNP
rs551161460 3540 dbSNP
rs1004108502 3541 dbSNP
rs1372732870 3545 dbSNP
rs1017349760 3549 dbSNP
rs1463730168 3557 dbSNP
rs186756934 3559 dbSNP
rs1476375941 3564 dbSNP
rs745848786 3566 dbSNP
rs570955230 3574 dbSNP
rs1418552219 3577 dbSNP
rs539981180 3590 dbSNP
rs1372719545 3603 dbSNP
rs1471302983 3609 dbSNP
rs1023053357 3618 dbSNP
rs1475899524 3626 dbSNP
rs552385018 3630 dbSNP
rs971578113 3639 dbSNP
rs981593759 3641 dbSNP
rs1249217463 3643 dbSNP
rs1177367747 3655 dbSNP
rs990027983 3668 dbSNP
rs868407286 3673 dbSNP
rs1169886934 3674 dbSNP
rs1423071932 3676 dbSNP
rs1335940777 3686 dbSNP
rs1434219214 3691 dbSNP
rs1031815209 3699 dbSNP
rs1316352086 3705 dbSNP
rs1307865607 3709 dbSNP
rs756891098 3711 dbSNP
rs1393352503 3712 dbSNP
rs1365811252 3719 dbSNP
rs1312148980 3730 dbSNP
rs1376047150 3731 dbSNP
rs914501473 3734 dbSNP
rs565765433 3736 dbSNP
rs1439833059 3738 dbSNP
rs767522628 3752 dbSNP
rs1416386733 3754 dbSNP
rs1394987679 3757 dbSNP
rs1166928106 3766 dbSNP
rs1451564498 3768 dbSNP
rs1316031296 3771 dbSNP
rs1159282511 3775 dbSNP
rs1420479751 3776 dbSNP
rs1392824519 3778 dbSNP
rs1365898104 3779 dbSNP
rs1192649637 3781 dbSNP
rs77281250 3785 dbSNP
rs1325652193 3790 dbSNP
rs1227612314 3814 dbSNP
rs1485863499 3818 dbSNP
rs1261357379 3842 dbSNP
rs956509583 3853 dbSNP
rs948701666 3856 dbSNP
rs990378671 3858 dbSNP
rs1232984876 3859 dbSNP
rs1371391404 3863 dbSNP
rs1327739144 3864 dbSNP
rs1380453540 3865 dbSNP
rs566588695 3875 dbSNP
rs1395348589 3880 dbSNP
rs1289396110 3889 dbSNP
rs554586228 3892 dbSNP
rs914900156 3895 dbSNP
rs967734479 3901 dbSNP
rs373852334 3905 dbSNP
rs574337158 3921 dbSNP
rs920996732 3927 dbSNP
rs536653848 3930 dbSNP
rs1428422639 3933 dbSNP
rs933856857 3942 dbSNP
rs1207444461 3956 dbSNP
rs1484695585 3970 dbSNP
rs1050902068 3973 dbSNP
rs1279724239 3975 dbSNP
rs1211854092 3982 dbSNP
rs1447945307 3991 dbSNP
rs1195546094 3993 dbSNP
rs556583369 3996 dbSNP
rs908329874 3997 dbSNP
rs939938141 3998 dbSNP
rs769701812 4001 dbSNP
rs898529558 4002 dbSNP
rs1012901247 4004 dbSNP
rs1044527229 4010 dbSNP
rs1373078851 4013 dbSNP
rs907300636 4019 dbSNP
rs995632857 4031 dbSNP
rs1376954128 4034 dbSNP
rs1002936307 4037 dbSNP
rs1165818082 4038 dbSNP
rs576519039 4040 dbSNP
rs775361266 4042 dbSNP
rs34690899 4047 dbSNP
rs1027158041 4052 dbSNP
rs1031845874 4054 dbSNP
rs890056025 4061 dbSNP
rs1436444261 4066 dbSNP
rs956198865 4076 dbSNP
rs545525223 4079 dbSNP
rs1195884726 4083 dbSNP
rs1012278277 4084 dbSNP
rs559873483 4085 dbSNP
rs1271097229 4097 dbSNP
rs191952969 4110 dbSNP
rs756379089 4122 dbSNP
rs1031428748 4128 dbSNP
rs955824366 4132 dbSNP
rs1353522884 4140 dbSNP
rs1439521916 4142 dbSNP
rs1292106467 4147 dbSNP
rs989996759 4150 dbSNP
rs1326373660 4156 dbSNP
rs1390480273 4157 dbSNP
rs1397643180 4163 dbSNP
rs542473869 4173 dbSNP
rs1170075731 4187 dbSNP
rs975038294 4194 dbSNP
rs1417836898 4199 dbSNP
rs766747833 4204 dbSNP
rs1476189602 4208 dbSNP
rs1231262532 4210 dbSNP
rs948689245 4213 dbSNP
rs754248805 4218 dbSNP
rs980499437 4223 dbSNP
rs1341774166 4229 dbSNP
rs928688725 4230 dbSNP
rs1260687985 4236 dbSNP
rs1332448081 4242 dbSNP
rs562251864 4245 dbSNP
rs1233830645 4251 dbSNP
rs531279220 4257 dbSNP
rs1277324235 4262 dbSNP
rs779411142 4262 dbSNP
rs1207313705 4263 dbSNP
rs1336024760 4273 dbSNP
rs1251340958 4278 dbSNP
rs897252289 4282 dbSNP
rs931451966 4290 dbSNP
rs1394210878 4304 dbSNP
rs1327093534 4305 dbSNP
rs1194518969 4312 dbSNP
rs748635219 4313 dbSNP
rs1463528674 4315 dbSNP
rs1405875475 4317 dbSNP
rs1158107674 4328 dbSNP
rs908403288 4329 dbSNP
rs939867226 4332 dbSNP
rs1038715753 4337 dbSNP
rs1192024274 4337 dbSNP
rs919839458 4340 dbSNP
rs1048561572 4355 dbSNP
rs544609844 4358 dbSNP
rs564507670 4364 dbSNP
rs866145813 4367 dbSNP
rs1254895080 4370 dbSNP
rs533444235 4372 dbSNP
rs1252167201 4386 dbSNP
rs1214234955 4406 dbSNP
rs890015668 4407 dbSNP
rs1281487952 4408 dbSNP
rs1222759658 4417 dbSNP
rs1350794669 4418 dbSNP
rs1231639471 4428 dbSNP
rs1310908805 4428 dbSNP
rs948589532 4438 dbSNP
rs1304709534 4440 dbSNP
rs1443709603 4442 dbSNP
rs1343995233 4455 dbSNP
rs1179507226 4458 dbSNP
rs1318269999 4464 dbSNP
rs1401320899 4470 dbSNP
rs372806642 4472 dbSNP
rs1044435985 4480 dbSNP
rs1454089130 4487 dbSNP
rs907164853 4489 dbSNP
rs555441146 4492 dbSNP
rs1002965977 4501 dbSNP
rs901471080 4504 dbSNP
rs997192752 4510 dbSNP
rs1053202073 4511 dbSNP
rs1214987780 4515 dbSNP
rs879528309 4521 dbSNP
rs1011730921 4522 dbSNP
rs1460543552 4525 dbSNP
rs756742558 4543 dbSNP
rs1326178178 4549 dbSNP
rs1022325012 4552 dbSNP
rs1372490853 4555 dbSNP
rs546802364 4556 dbSNP
rs780545607 4557 dbSNP
rs970373473 4569 dbSNP
rs996343395 4584 dbSNP
rs1027952046 4586 dbSNP
rs771979020 4588 dbSNP
rs959995027 4588 dbSNP
rs1336911763 4590 dbSNP
rs1434308765 4600 dbSNP
rs1241606844 4601 dbSNP
rs1175784609 4605 dbSNP
rs145736867 4615 dbSNP
rs1015325231 4616 dbSNP
rs931419615 4620 dbSNP
rs961532137 4622 dbSNP
rs1264667508 4624 dbSNP
rs973945587 4635 dbSNP
rs1485069374 4642 dbSNP
rs1280546418 4648 dbSNP
rs1211807949 4658 dbSNP
rs528287061 4661 dbSNP
rs1275305154 4662 dbSNP
rs775183114 4666 dbSNP
rs538100180 4671 dbSNP
rs948621925 4676 dbSNP
rs1414196554 4679 dbSNP
rs979982077 4682 dbSNP
rs1304747393 4684 dbSNP
rs928654700 4693 dbSNP
rs938663626 4702 dbSNP
rs1249722179 4708 dbSNP
rs749027112 4710 dbSNP
rs548420594 4711 dbSNP
rs1352538521 4714 dbSNP
rs1419666214 4718 dbSNP
rs1184282655 4719 dbSNP
rs1415313969 4720 dbSNP
rs901434148 4723 dbSNP
rs997160038 4726 dbSNP
rs1165137595 4728 dbSNP
rs1052793019 4729 dbSNP
rs1211035868 4746 dbSNP
rs1474554607 4746 dbSNP
rs745330610 4746 dbSNP
rs769835856 4746 dbSNP
rs1205723994 4754 dbSNP
rs1222247355 4754 dbSNP
rs1298980618 4754 dbSNP
rs1372933224 4754 dbSNP
rs56271592 4754 dbSNP
rs752707070 4754 dbSNP
rs75479517 4754 dbSNP
rs3208970 4755 dbSNP
rs201477170 4756 dbSNP
rs1323739932 4757 dbSNP
rs1460910652 4759 dbSNP
rs1461295645 4760 dbSNP
rs1416917305 4762 dbSNP
rs1406726486 4769 dbSNP
rs1011363100 4771 dbSNP
rs1053638088 4772 dbSNP
rs1459320274 4772 dbSNP
rs891868329 4773 dbSNP
rs1021872308 4774 dbSNP
rs568258993 4778 dbSNP
rs556439407 4782 dbSNP
rs900642874 4796 dbSNP
rs147775614 4800 dbSNP
rs1307888381 4806 dbSNP
rs1030536720 4816 dbSNP
rs1242601943 4826 dbSNP
rs918616886 4828 dbSNP
rs1301067728 4839 dbSNP
rs890815378 4840 dbSNP
rs1440046220 4848 dbSNP
rs1306047751 4853 dbSNP
rs952791966 4859 dbSNP
rs556521905 4864 dbSNP
rs760795407 4867 dbSNP
rs199688219 4878 dbSNP
rs774302789 4882 dbSNP
rs761674610 4892 dbSNP
rs772091938 4899 dbSNP
rs1203890205 4901 dbSNP
rs1441232808 4902 dbSNP
rs1251909257 4904 dbSNP
rs984261463 4913 dbSNP
rs911304274 4914 dbSNP
rs961171421 4928 dbSNP
rs1434139887 4929 dbSNP
rs942854124 4937 dbSNP
rs974191236 4938 dbSNP
rs10804464 4952 dbSNP
rs969872105 4955 dbSNP
rs980055403 4956 dbSNP
rs1346046631 4959 dbSNP
rs928520285 4966 dbSNP
rs1277901637 4973 dbSNP
rs1233232863 4974 dbSNP
rs1351572582 4981 dbSNP
rs938694630 4989 dbSNP
rs1426306877 4991 dbSNP
rs564409162 4992 dbSNP
rs1169315963 5001 dbSNP
rs1360653347 5010 dbSNP
rs373017082 5016 dbSNP
rs760904139 5019 dbSNP
rs1181166220 5026 dbSNP
rs913203203 5041 dbSNP
rs947036229 5042 dbSNP
rs1421116663 5058 dbSNP
rs539117804 5067 dbSNP
rs779797196 5073 dbSNP
rs552807013 5078 dbSNP
rs754230539 5079 dbSNP
rs1415773422 5080 dbSNP
rs766694484 5090 dbSNP
rs1466807982 5098 dbSNP
rs1379742765 5106 dbSNP
rs1191645041 5116 dbSNP
rs1042780857 5117 dbSNP
rs1043525034 5119 dbSNP
rs900716763 5120 dbSNP
rs1001353955 5131 dbSNP
rs1257026990 5135 dbSNP
rs1035958091 5138 dbSNP
rs932130881 5144 dbSNP
rs573346313 5145 dbSNP
rs1051995698 5150 dbSNP
rs895724552 5151 dbSNP
rs890720118 5154 dbSNP
rs1225111965 5159 dbSNP
rs746822971 5159 dbSNP
rs994080566 5165 dbSNP
rs1410104638 5169 dbSNP
rs759931025 5173 dbSNP
rs952675828 5176 dbSNP
rs1005521727 5178 dbSNP
rs1166560992 5181 dbSNP
rs1232245235 5184 dbSNP
rs765876010 5188 dbSNP
rs77430315 5189 dbSNP
rs1347145586 5192 dbSNP
rs1211317066 5195 dbSNP
rs896780914 5196 dbSNP
rs759906240 5198 dbSNP
rs922797829 5199 dbSNP
rs1185522225 5200 dbSNP
rs1262051985 5201 dbSNP
rs935565060 5203 dbSNP
rs1450756350 5215 dbSNP
rs988351217 5216 dbSNP
rs1332014149 5223 dbSNP
rs753184143 5223 dbSNP
rs1245031050 5228 dbSNP
rs1026734229 5230 dbSNP
rs147016842 5234 dbSNP
rs1001357504 5245 dbSNP
rs575993505 5246 dbSNP
rs1343766409 5248 dbSNP
rs959965768 5260 dbSNP
rs1460391145 5269 dbSNP
rs1417248598 5271 dbSNP
rs1163956787 5272 dbSNP
rs989098910 5275 dbSNP
rs937116765 5277 dbSNP
rs1362236080 5279 dbSNP
rs1056958806 5282 dbSNP
rs765544199 5295 dbSNP
rs1238621222 5300 dbSNP
rs753154500 5308 dbSNP
rs978890564 5331 dbSNP
rs538971327 5333 dbSNP
rs1467113564 5340 dbSNP
rs1288504509 5353 dbSNP
rs75599097 5354 dbSNP
rs888381316 5357 dbSNP
rs4855771 5363 dbSNP
rs932037921 5372 dbSNP
rs1005532601 5374 dbSNP
rs1348692510 5376 dbSNP
rs1234881832 5377 dbSNP
rs1051899930 5378 dbSNP
rs564446859 5386 dbSNP
rs1280674797 5390 dbSNP
rs1018718603 5391 dbSNP
rs912021705 5404 dbSNP
rs1394325999 5408 dbSNP
rs751078732 5410 dbSNP
rs964151751 5412 dbSNP
rs1382893456 5421 dbSNP
rs940961622 5422 dbSNP
rs1158197709 5425 dbSNP
rs977279226 5431 dbSNP
rs1380646667 5440 dbSNP
rs1037014552 5447 dbSNP
rs112576336 5450 dbSNP
rs1029752796 5451 dbSNP
rs1215441474 5455 dbSNP
rs1281600712 5455 dbSNP
rs374328240 5455 dbSNP
rs374342691 5455 dbSNP
rs554596889 5455 dbSNP
rs79033300 5456 dbSNP
rs1251765674 5457 dbSNP
rs1161147535 5458 dbSNP
rs956822454 5463 dbSNP
rs1454361445 5467 dbSNP
rs199784138 5468 dbSNP
rs1275896185 5469 dbSNP
rs1406490716 5473 dbSNP
rs1400461158 5478 dbSNP
rs757935214 5479 dbSNP
rs1160376779 5488 dbSNP
rs184089409 5490 dbSNP
rs1460020887 5492 dbSNP
rs988323562 5498 dbSNP
rs1420512459 5513 dbSNP
rs915475306 5516 dbSNP
rs1172043988 5518 dbSNP
rs946983704 5525 dbSNP
rs1424220972 5527 dbSNP
rs1371756994 5528 dbSNP
rs1479007680 5533 dbSNP
rs978438675 5538 dbSNP
rs1192240166 5539 dbSNP
rs1488347948 5544 dbSNP
rs1264795538 5546 dbSNP
rs1438760894 5553 dbSNP
rs1208290358 5557 dbSNP
rs1311961424 5560 dbSNP
rs1276510891 5570 dbSNP
rs1279863195 5577 dbSNP
rs1221404794 5578 dbSNP
rs1338070230 5579 dbSNP
rs1371176479 5603 dbSNP
rs1400648766 5606 dbSNP
rs1342458880 5608 dbSNP
rs1311231419 5610 dbSNP
rs1447654517 5613 dbSNP
rs778414689 5614 dbSNP
rs1048203697 5618 dbSNP
rs116099596 5622 dbSNP
rs937105599 5626 dbSNP
rs1001264289 5636 dbSNP
rs1056769351 5646 dbSNP
rs1330952804 5658 dbSNP
rs1169874876 5662 dbSNP
rs917004768 5664 dbSNP
rs929787584 5666 dbSNP
rs1185340057 5672 dbSNP
rs1482746757 5682 dbSNP
rs1238386938 5683 dbSNP
rs1212625030 5687 dbSNP
rs1046902819 5690 dbSNP
rs1257906327 5690 dbSNP
rs1035528191 5691 dbSNP
rs1272182142 5718 dbSNP
rs749926280 5738 dbSNP
rs888356864 5749 dbSNP
rs755638059 5753 dbSNP
rs565009378 5755 dbSNP
rs1227930567 5766 dbSNP
rs779619227 5770 dbSNP
rs1286203760 5771 dbSNP
rs899790233 5780 dbSNP
rs1020601479 5783 dbSNP
rs1231669388 5789 dbSNP
rs968774769 5790 dbSNP
rs560389054 5797 dbSNP
rs1470125315 5798 dbSNP
rs1029721607 5802 dbSNP
rs76068585 5810 dbSNP
rs1009722840 5841 dbSNP
rs1164449210 5842 dbSNP
rs1422747667 5851 dbSNP
rs200940433 5857 dbSNP
rs921912836 5865 dbSNP
rs1468872640 5868 dbSNP
rs1238014382 5874 dbSNP
rs6792296 5880 dbSNP
rs987482016 5881 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 56987.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucgggaacgguaggACCAGGUg 5'
                        ||||||| 
Target 5' --------------UGGUCCAu 3'
 		1 - 8
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 56987.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
Experimental Support 4 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000415149.2 | 3UTR | UCCAUAUAUUCUGCACUUUUAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000415149.2 | 3UTR | UGGUCCAUAUAUUCUGCACUUUUAUAUUUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000415149.2 | 3UTR | UCCAUAUAUUCUGCACUUUUAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000415149.2 | 3UTR | UGGUCCAUAUAUUCUGCACUUUUAUAUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000415149.2 | 3UTR | CUCGUGGUCCAUAUAUUCUGCACUUUUAUAUUUGCCACC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM1065669
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_8
Location of target site ENST00000415149.2 | 3UTR | UGGUCCAUAUAUUCUGCACUUUUAUAUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000415149.2 | 3UTR | CCUCGUGGUCCAUAUAUUCUGCACUUUUAUAUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
30 hsa-miR-4776-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT303862 MAT2A methionine adenosyltransferase 2A 2 4
MIRT445702 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 4
MIRT451664 KRT8 keratin 8 2 4
MIRT456718 TMEM239 transmembrane protein 239 2 2
MIRT462899 ZNRF3 zinc and ring finger 3 2 2
MIRT469058 RNF20 ring finger protein 20 2 2
MIRT476392 GDE1 glycerophosphodiester phosphodiesterase 1 2 8
MIRT477147 FADS1 fatty acid desaturase 1 2 8
MIRT479187 CLCN5 chloride voltage-gated channel 5 2 6
MIRT480935 BBX BBX, HMG-box containing 2 8
MIRT496801 WNT2B Wnt family member 2B 2 2
MIRT503537 SNTN sentan, cilia apical structure protein 2 4
MIRT507648 CREBRF CREB3 regulatory factor 2 4
MIRT507918 C2orf72 chromosome 2 open reading frame 72 2 4
MIRT510817 SBNO1 strawberry notch homolog 1 2 4
MIRT523221 HIST1H3A histone cluster 1 H3 family member a 2 2
MIRT529829 ARGFX arginine-fifty homeobox 2 2
MIRT532355 SLC1A4 solute carrier family 1 member 4 2 2
MIRT532401 RAB44 RAB44, member RAS oncogene family 2 2
MIRT535409 PDZD8 PDZ domain containing 8 2 2
MIRT566060 RCC2 regulator of chromosome condensation 2 2 2
MIRT571239 FADS6 fatty acid desaturase 6 2 2
MIRT611144 TNRC6B trinucleotide repeat containing 6B 2 4
MIRT621399 PYCRL pyrroline-5-carboxylate reductase 3 2 2
MIRT647404 SSTR3 somatostatin receptor 3 2 2
MIRT654033 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT659428 COL1A1 collagen type I alpha 1 chain 2 2
MIRT662068 ZNF284 zinc finger protein 284 2 2
MIRT663830 AGBL5 ATP/GTP binding protein like 5 2 4
MIRT699963 RREB1 ras responsive element binding protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4776-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-4776-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4776-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-4776-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-4776-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

Error report submission