pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol ALG8   
Synonyms CDG1H
Description ALG8, alpha-1,3-glucosyltransferase
Transcript NM_001007027   
Other Transcripts NM_024079   
Expression
Putative miRNA Targets on ALG8
3'UTR of ALG8
(miRNA target sites are highlighted)
>ALG8|NM_001007027|3'UTR
   1 CTGAAACCTCCGCCTCCCAGAAAAGAAAAACCTCTTTTTAATTGGATGGAAACTTTCTACCTGCTTGGCCTGGGGCCTCT
  81 GGAAGTCTGCTGTGAATTTGTATTCCCTTTCACCTCCTGGAAGGTGAAGTACCCCTTCATCCCTTTGTTACTAACCTCAG
 161 TGTATTGTGCAGTAGGCATCACATATGCTTGGTTCAAACTGTATGTTTCAGTATTGATTGACTCTGCTATTGGCAAGACA
 241 AAGAAACAATGAATAAAGGAACTGCTTAGATATG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     |: ||||||| 
Target 5' tttgtattcccTTTCACCTCCt 3'
97 - 118 143.00 -12.50
2
miRNA  3' gcucacACUCU--AGUGUGGAGGg 5'
                ||| |  || |:||||| 
Target 5' -----cTGAAACCTC-CGCCTCCc 3'
1 - 18 133.00 -15.20
3
miRNA  3' gcUCACACUCUAGUGUGGAGGG- 5'
            || |||| | :|| |||:|  
Target 5' gaAG-GTGA-AGTACCCCTTCAT 3'
120 - 140 106.00 -13.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1189265 1420 ClinVar
493098 1730 ClinVar
939502 1778 ClinVar
697999 1792 ClinVar
306211 1809 ClinVar
715356 1855 ClinVar
284641 1856 ClinVar
882709 1865 ClinVar
930774 1882 ClinVar
1025402 1905 ClinVar
709638 1927 ClinVar
COSN16027359 170 COSMIC
COSN16709760 207 COSMIC
COSN7020270 551 COSMIC
COSN7020269 640 COSMIC
COSN1138289 860 COSMIC
COSN7020268 936 COSMIC
COSN23475309 982 COSMIC
COSN10092206 986 COSMIC
COSN26283064 1052 COSMIC
COSN27335836 1167 COSMIC
COSN16028204 1446 COSMIC
COSN21429205 1653 COSMIC
COSN32133464 1658 COSMIC
COSN27909800 1680 COSMIC
COSM7843870 1686 COSMIC
COSM4819332 1698 COSMIC
COSM8824253 1730 COSMIC
COSM5967016 1760 COSMIC
COSM932237 1760 COSMIC
COSM159020 1789 COSMIC
COSM3870263 1794 COSMIC
COSM9530488 1801 COSMIC
COSM4949367 1808 COSMIC
COSM3953828 1816 COSMIC
COSM9571412 1817 COSMIC
COSM4901819 1819 COSMIC
COSM9692943 1820 COSMIC
COSM7275607 1855 COSMIC
COSM932236 1864 COSMIC
COSM467455 1870 COSMIC
COSM6562553 1873 COSMIC
COSM9779777 1879 COSMIC
COSM278784 1884 COSMIC
COSM9253052 1884 COSMIC
COSM1475920 1921 COSMIC
rs684603 91 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1197346302 4 dbSNP
rs547110082 11 dbSNP
rs897200126 12 dbSNP
rs1245315022 14 dbSNP
rs764259604 16 dbSNP
rs1291826407 18 dbSNP
rs1414620796 19 dbSNP
rs1420260184 21 dbSNP
rs527420401 28 dbSNP
rs568621053 29 dbSNP
rs951098005 31 dbSNP
rs1338449149 49 dbSNP
rs1027120178 53 dbSNP
rs1036952759 59 dbSNP
rs1270430536 61 dbSNP
rs964199665 64 dbSNP
rs1018157988 68 dbSNP
rs60389376 74 dbSNP
rs1432521215 75 dbSNP
rs1338143872 77 dbSNP
rs888506527 80 dbSNP
rs1332968190 81 dbSNP
rs532031188 83 dbSNP
rs1052372008 84 dbSNP
rs684603 91 dbSNP
rs143149989 110 dbSNP
rs1178559431 112 dbSNP
rs1428181715 115 dbSNP
rs1389995745 117 dbSNP
rs1399925069 117 dbSNP
rs1168657612 123 dbSNP
rs1476529365 124 dbSNP
rs186258702 126 dbSNP
rs934898247 127 dbSNP
rs1433917139 130 dbSNP
rs1301980679 134 dbSNP
rs560543511 139 dbSNP
rs572232 144 dbSNP
rs1443139164 146 dbSNP
rs1285791149 151 dbSNP
rs1327437092 152 dbSNP
rs1223594980 159 dbSNP
rs916057219 164 dbSNP
rs977751407 169 dbSNP
rs1055856163 170 dbSNP
rs1202986941 187 dbSNP
rs11237388 190 dbSNP
rs572076 198 dbSNP
rs1219852439 201 dbSNP
rs1490540728 201 dbSNP
rs914976247 202 dbSNP
rs555529966 206 dbSNP
rs990960242 208 dbSNP
rs1158914528 217 dbSNP
rs180702509 219 dbSNP
rs1034811860 220 dbSNP
rs1162564667 226 dbSNP
rs1365620747 231 dbSNP
rs1003416398 243 dbSNP
rs1406253675 246 dbSNP
rs983007424 253 dbSNP
rs866291025 255 dbSNP
rs1442204779 257 dbSNP
rs576244932 265 dbSNP
rs1280472945 266 dbSNP
rs961242352 274 dbSNP
rs1016021555 278 dbSNP
rs780323177 279 dbSNP
rs1360170130 280 dbSNP
rs1224828173 281 dbSNP
rs370058141 294 dbSNP
rs1437157411 302 dbSNP
rs1182483786 303 dbSNP
rs868405136 307 dbSNP
rs1471707386 313 dbSNP
rs1182533208 316 dbSNP
rs1049865357 317 dbSNP
rs1426225410 324 dbSNP
rs1166170930 331 dbSNP
rs1395197270 336 dbSNP
rs1409872917 336 dbSNP
rs1330171176 343 dbSNP
rs997330771 348 dbSNP
rs1315322514 358 dbSNP
rs539017765 369 dbSNP
rs189227461 378 dbSNP
rs1041195894 383 dbSNP
rs934908182 384 dbSNP
rs903407429 390 dbSNP
rs1411813495 393 dbSNP
rs1411884555 407 dbSNP
rs1275038093 410 dbSNP
rs1440427839 429 dbSNP
rs1202783321 443 dbSNP
rs186390654 444 dbSNP
rs1446054112 450 dbSNP
rs1186337050 453 dbSNP
rs1042467517 462 dbSNP
rs999475000 466 dbSNP
rs903180802 472 dbSNP
rs746516870 475 dbSNP
rs1399275655 482 dbSNP
rs1468751123 486 dbSNP
rs946429654 509 dbSNP
rs1021661731 510 dbSNP
rs368860391 512 dbSNP
rs1012001243 519 dbSNP
rs1325864264 520 dbSNP
rs914879181 523 dbSNP
rs533874898 527 dbSNP
rs1321330239 528 dbSNP
rs758681323 529 dbSNP
rs1263504792 533 dbSNP
rs1462502314 535 dbSNP
rs1482707022 536 dbSNP
rs1260616166 542 dbSNP
rs927807869 543 dbSNP
rs375709073 559 dbSNP
rs147232348 560 dbSNP
rs1479723633 565 dbSNP
rs961292091 566 dbSNP
rs1015534680 568 dbSNP
rs984431106 570 dbSNP
rs1228580186 578 dbSNP
rs1430374710 578 dbSNP
rs1336228490 579 dbSNP
rs1471164872 580 dbSNP
rs1285945472 582 dbSNP
rs371837418 584 dbSNP
rs952775483 585 dbSNP
rs930280573 595 dbSNP
rs750441768 598 dbSNP
rs370651083 601 dbSNP
rs1222772567 610 dbSNP
rs1299306220 614 dbSNP
rs973729516 619 dbSNP
rs996937593 620 dbSNP
rs1259986283 622 dbSNP
rs1350933089 638 dbSNP
rs568107738 639 dbSNP
rs1206565366 646 dbSNP
rs1266120914 656 dbSNP
rs910946897 657 dbSNP
rs901223973 667 dbSNP
rs114404838 671 dbSNP
rs1270255610 672 dbSNP
rs955176164 673 dbSNP
rs1030880521 676 dbSNP
rs1363627156 682 dbSNP
rs999002949 685 dbSNP
rs1454484691 686 dbSNP
rs1160539451 692 dbSNP
rs548227492 694 dbSNP
rs1404415055 695 dbSNP
rs530151858 696 dbSNP
rs1347307426 702 dbSNP
rs947620383 703 dbSNP
rs1022636851 704 dbSNP
rs893474294 705 dbSNP
rs1305982522 731 dbSNP
rs681443 732 dbSNP
rs1075202 733 dbSNP
rs1034383024 737 dbSNP
rs1476905827 738 dbSNP
rs532885004 739 dbSNP
rs76684997 740 dbSNP
rs371854097 744 dbSNP
rs1047258957 748 dbSNP
rs1180668708 753 dbSNP
rs1265630788 754 dbSNP
rs1383630520 765 dbSNP
rs1424326485 775 dbSNP
rs764681350 785 dbSNP
rs370117447 786 dbSNP
rs1367567419 787 dbSNP
rs1460379601 788 dbSNP
rs930141332 798 dbSNP
rs1297558460 801 dbSNP
rs1207543984 811 dbSNP
rs1373735526 814 dbSNP
rs1392935937 815 dbSNP
rs1312728187 841 dbSNP
rs1329328193 850 dbSNP
rs1308304235 851 dbSNP
rs1316507921 854 dbSNP
rs117961204 860 dbSNP
rs1039043225 861 dbSNP
rs1251247257 866 dbSNP
rs1481130340 868 dbSNP
rs942369260 869 dbSNP
rs1241755711 885 dbSNP
rs1365870813 896 dbSNP
rs530209427 898 dbSNP
rs1184488640 901 dbSNP
rs1415987338 903 dbSNP
rs1274666685 905 dbSNP
rs1426845191 906 dbSNP
rs60520497 907 dbSNP
rs1373488658 908 dbSNP
rs952699493 916 dbSNP
rs1334417692 921 dbSNP
rs1028333636 932 dbSNP
rs1452850598 933 dbSNP
rs1338330988 941 dbSNP
rs181197366 949 dbSNP
rs575854000 950 dbSNP
rs1019736672 960 dbSNP
rs138637002 964 dbSNP
rs1308594357 967 dbSNP
rs1221045746 970 dbSNP
rs1261630688 982 dbSNP
rs977914353 988 dbSNP
rs1204501278 989 dbSNP
rs1412715315 993 dbSNP
rs12279480 996 dbSNP
rs1022210365 998 dbSNP
rs1011837432 999 dbSNP
rs767545129 1000 dbSNP
rs757019011 1001 dbSNP
rs759758731 1024 dbSNP
rs72946513 1025 dbSNP
rs906194488 1026 dbSNP
rs1485898758 1027 dbSNP
rs553347892 1030 dbSNP
rs1341883031 1035 dbSNP
rs939769936 1036 dbSNP
rs908372833 1044 dbSNP
rs1048670596 1045 dbSNP
rs931259806 1046 dbSNP
rs1224496823 1048 dbSNP
rs971418042 1052 dbSNP
rs373028984 1054 dbSNP
rs1315322937 1065 dbSNP
rs1026150125 1069 dbSNP
rs1215402525 1069 dbSNP
rs994321341 1074 dbSNP
rs898689701 1078 dbSNP
rs769566777 1093 dbSNP
rs1235472084 1097 dbSNP
rs1007190065 1104 dbSNP
rs1174102185 1110 dbSNP
rs1405569659 1113 dbSNP
rs1295647761 1115 dbSNP
rs1434675014 1117 dbSNP
rs616892 1119 dbSNP
rs1050715855 1128 dbSNP
rs965401682 1129 dbSNP
rs111908986 1153 dbSNP
rs923691739 1163 dbSNP
rs1042545806 1171 dbSNP
rs946557280 1173 dbSNP
rs1437863109 1179 dbSNP
rs1174261264 1180 dbSNP
rs977543360 1203 dbSNP
rs1276955503 1205 dbSNP
rs1436324700 1212 dbSNP
rs915082198 1214 dbSNP
rs990750087 1215 dbSNP
rs554385907 1216 dbSNP
rs1355876841 1218 dbSNP
rs1220336548 1225 dbSNP
rs927891434 1229 dbSNP
rs1428781091 1231 dbSNP
rs538409142 1252 dbSNP
rs59979267 1252 dbSNP
rs536317477 1253 dbSNP
rs1179622941 1259 dbSNP
rs768550000 1260 dbSNP
rs1177356901 1265 dbSNP
rs1482677706 1265 dbSNP
rs865952370 1282 dbSNP
rs1257393706 1290 dbSNP
rs971388364 1292 dbSNP
rs773960202 1296 dbSNP
rs184497191 1297 dbSNP
rs1365712808 1302 dbSNP
rs1406410366 1303 dbSNP
rs1326154050 1304 dbSNP
rs779565537 1309 dbSNP
rs1017556047 1311 dbSNP
rs1007072087 1312 dbSNP
rs1308310388 1321 dbSNP
rs1379388292 1324 dbSNP
rs771510794 1325 dbSNP
rs906246646 1326 dbSNP
rs552839895 1336 dbSNP
rs539332344 1339 dbSNP
rs567218866 1340 dbSNP
rs1357164511 1344 dbSNP
rs546930623 1357 dbSNP
rs1270802633 1358 dbSNP
rs140829398 1363 dbSNP
rs1378592303 1371 dbSNP
rs997822818 1374 dbSNP
rs886831073 1375 dbSNP
rs148045550 1377 dbSNP
rs550775179 1378 dbSNP
rs1182622409 1384 dbSNP
rs1462128605 1391 dbSNP
rs1385269532 1395 dbSNP
rs1473498969 1398 dbSNP
rs1165449647 1401 dbSNP
rs1417979890 1402 dbSNP
rs1409968108 1403 dbSNP
rs1332422208 1404 dbSNP
rs1402964392 1406 dbSNP
rs946497695 1408 dbSNP
rs931164459 1409 dbSNP
rs530943711 1410 dbSNP
rs192335107 1411 dbSNP
rs1039679990 1413 dbSNP
rs201761652 1420 dbSNP
rs1268548477 1429 dbSNP
rs1338634123 1432 dbSNP
rs1219226459 1439 dbSNP
rs1259698432 1441 dbSNP
rs1459838051 1444 dbSNP
rs572204429 1444 dbSNP
rs1158359395 1448 dbSNP
rs868180865 1459 dbSNP
rs1443847487 1472 dbSNP
rs1189217444 1474 dbSNP
rs1486940573 1479 dbSNP
rs370907340 1482 dbSNP
rs1372038860 1484 dbSNP
rs1475359332 1485 dbSNP
rs937847190 1491 dbSNP
rs943934870 1491 dbSNP
rs1426174234 1492 dbSNP
rs927860191 1493 dbSNP
rs576677470 1504 dbSNP
rs912571524 1509 dbSNP
rs1398073589 1518 dbSNP
rs745455160 1523 dbSNP
rs1195573797 1525 dbSNP
rs967505542 1526 dbSNP
rs1325955044 1530 dbSNP
rs982005880 1534 dbSNP
rs914663417 1536 dbSNP
rs1321084185 1539 dbSNP
rs990236299 1541 dbSNP
rs1222662950 1545 dbSNP
rs1481201431 1548 dbSNP
rs578211365 1552 dbSNP
rs1256441108 1559 dbSNP
rs1346649947 1562 dbSNP
rs959162684 1566 dbSNP
rs971354267 1568 dbSNP
rs778438777 1569 dbSNP
rs1034477998 1575 dbSNP
rs1242951830 1580 dbSNP
rs1265990340 1585 dbSNP
rs1334192982 1587 dbSNP
rs1003080856 1593 dbSNP
rs1199140259 1597 dbSNP
rs1294022144 1610 dbSNP
rs972836196 1611 dbSNP
rs113781975 1617 dbSNP
rs1024611206 1631 dbSNP
rs540193489 1634 dbSNP
rs1004264282 1635 dbSNP
rs758640420 1647 dbSNP
rs752715301 1655 dbSNP
rs1399428226 1658 dbSNP
rs765305331 1662 dbSNP
rs1017022534 1666 dbSNP
rs759952142 1673 dbSNP
rs777249514 1676 dbSNP
rs766628152 1677 dbSNP
rs985604378 1686 dbSNP
rs771039596 1687 dbSNP
rs1265033672 1688 dbSNP
rs568134909 1696 dbSNP
rs868379003 1697 dbSNP
rs113969656 1701 dbSNP
rs146871020 1703 dbSNP
rs142520385 1705 dbSNP
rs1289985948 1706 dbSNP
rs768378311 1709 dbSNP
rs1211038207 1713 dbSNP
rs1332025234 1720 dbSNP
rs1272213807 1723 dbSNP
rs1218835499 1730 dbSNP
rs1329908083 1734 dbSNP
rs748966540 1738 dbSNP
rs1393533112 1744 dbSNP
rs374011165 1750 dbSNP
rs1429272946 1754 dbSNP
rs1326301333 1765 dbSNP
rs769413308 1778 dbSNP
rs1218147551 1780 dbSNP
rs745780249 1782 dbSNP
rs199589882 1785 dbSNP
rs770803572 1787 dbSNP
rs1039520454 1789 dbSNP
rs746756065 1792 dbSNP
rs1184499128 1793 dbSNP
rs1475045822 1804 dbSNP
rs777557874 1809 dbSNP
rs758549233 1812 dbSNP
rs493394 1813 dbSNP
rs1303132268 1814 dbSNP
rs749259253 1814 dbSNP
rs752979103 1816 dbSNP
rs1198913856 1821 dbSNP
rs778949257 1822 dbSNP
rs755133368 1828 dbSNP
rs1213111836 1833 dbSNP
rs370160245 1834 dbSNP
rs878976360 1836 dbSNP
rs1339136789 1837 dbSNP
rs35227497 1838 dbSNP
rs1363846579 1839 dbSNP
rs766871884 1840 dbSNP
rs761110403 1843 dbSNP
rs189308811 1848 dbSNP
rs1325258670 1854 dbSNP
rs148820351 1855 dbSNP
rs17856033 1856 dbSNP
rs1392526248 1857 dbSNP
rs1183665017 1861 dbSNP
rs184974623 1863 dbSNP
rs775344428 1864 dbSNP
rs149692072 1865 dbSNP
rs1425576797 1875 dbSNP
rs1174284944 1881 dbSNP
rs1452452113 1883 dbSNP
rs759129215 1888 dbSNP
rs776024641 1890 dbSNP
rs770840967 1893 dbSNP
rs914569960 1900 dbSNP
rs1431264454 1905 dbSNP
rs990677542 1905 dbSNP
rs1241922071 1911 dbSNP
rs937403026 1912 dbSNP
rs746950113 1913 dbSNP
rs777535623 1914 dbSNP
rs1358149138 1921 dbSNP
rs479617 1923 dbSNP
rs1279747885 1925 dbSNP
rs479612 1927 dbSNP
rs1346281230 1928 dbSNP
rs375617220 1931 dbSNP
rs893505084 1934 dbSNP
rs748346349 1937 dbSNP
rs779234940 1943 dbSNP
rs755185258 1946 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     |: ||||||| 
Target 5' ----uauucccUUUCACCUCCu 3'
1 - 18
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000376156.3 | 3UTR | uauucccuuucaccuccug
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

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