pre-miRNA Information
pre-miRNA hsa-mir-1303   
Genomic Coordinates chr5: 154685776 - 154685861
Synonyms MIRN1303, hsa-mir-1303, MIR1303
Description Homo sapiens miR-1303 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1303
Sequence 52| UUUAGAGACGGGGUCUUGCUCU |73
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 5 + 154685830 23291724, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs370437195 6 dbSNP
rs1195001383 7 dbSNP
rs546614687 8 dbSNP
rs762579883 9 dbSNP
rs766041486 10 dbSNP
rs751079975 12 dbSNP
rs888516744 13 dbSNP
rs566454487 14 dbSNP
rs766973220 15 dbSNP
rs1474274822 17 dbSNP
rs753222192 18 dbSNP
rs1230907999 19 dbSNP
rs756552638 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FAM177A1   
Synonyms C14orf24
Description family with sequence similarity 177 member A1
Transcript NM_001079519   
Other Transcripts NM_173607   
Expression
Putative miRNA Targets on FAM177A1
3'UTR of FAM177A1
(miRNA target sites are highlighted)
>FAM177A1|NM_001079519|3'UTR
   1 AATGAAATGACTATCAAGCTTCAAACTCTTAAGTTTTTTTTTTTTAATACAAAAACTTTCACATTCTTTATTCAGTGGGA
  81 CTTAATACAATTATTTATATTTTAAATTATTAAAGTATCTGGAAAGGGAAAATGTTTTCTTCATTTTTAGGATCTATCTA
 161 GCAAAAGCCAGATCTGAAATTCAGATATTTGTACTGTTTTTACTGTGTATAGAAATTAGTGCTTTGGTTTTAAAATGATC
 241 TTTTAAAAAAGTTAAGGACATCCTAGAGCCTTAATAGTTAAGAAGAGTTAAATTATCAAGCCTATTTGTGCATTTGCTTT
 321 TTTTGAAAAAGGTAAGTTGCTGATTAAGTCTAATTGGAATTGATAATTCCATAGTCTTAGATTAAAATGAGGATATTTTC
 401 TCCTAGATTTTCTCATGTTATGCCATGCATTTATATATCTAACCATTAATTTCACACTAAGGATGCTTCACCATATAATA
 481 AAAGGAGCAAGATGGAAGCACTTTGAATTTTCTTTCATTGAGAATAACTGTTTTATGTAAGAATCTGTATTTATAACACC
 561 AGATATTAAGATAGGCTTCCATTTTTTAATGCAAGCCACTTACTTAATCTTGTATTCTTTTTCAGGACTCAAATAACTAG
 641 CTTTGAACATAATATTAAAACACTACTTATAGAATAGATTTATTAATGTTAATACCTAGTGAATATCCATGTGGCATCCT
 721 GGTTATGTTATCGGTTCAGCGTTAATCCTATAGAAAAGTGGTTTGGAGGGGATTGGGGGATAGTGGGACAGGTATAGATT
 801 TAATCCATCAGGAGCAATTAGATATTGTATAAGGTGCAATGATAGCCTAATGAAATTACCCGTCATTCATCATTTAGAAG
 881 TAGCAACAGTGAAGACTGGACAGTTTACTTGAATCTGGTTGGCCACTCCTCTACCTACTTGGTTATTTGTAAACCTTACA
 961 AATGTATATATTGTGAAGCTAATTTTGAAAATATTCCTAAATATGGCCAGGTACGGTGCTCACACCTGTAATCCCAGCAC
1041 TTTGGGAGGCTGAAGTGGGCAGATTACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACGTAGTGAAACCCCGTCTCT
1121 ACAAAAATACAAAAATTAGCCAGGCGTGGTGGTGCACGTCTGTAATCCCAGCTGCTCGGGAGGCTGAGGCAGGAGAATCA
1201 CTTGAACCAGGGAGGTGGAGGTTGCAGTGAGCCAAGATTGCACCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCA
1281 TCTTGGGGGGAAAAAAGTATATATATATACACACACACAGACACACACACACACACATATATCTCTAAATGTGTGTATAG
1361 AACCTTTTATCAGTATAACATTGATTTATAATTAAATGTGGGTGAGGAAGAATGTGTGGAGTGTTTCAGAAATTTTGATC
1441 TTAAAAGCCTTTTCAGAAACTCAAAGCTTTCAGAAATTAATAGTTATATTAATAGCCTTCTAAACAGCATTAAGTTTTCA
1521 ATTTTAATATATCTATATAAAATATAGTGTCAAAGAAAGTAACATCAATATAGTGGGTCTGTAATGGAAATCTGTCAATG
1601 AACATGAACTGAGTTCTTCAACTACAGGTTGAAGGATAATTAAACTTTTCATTAGGAGTGTTCAGCTACATGGATTCATG
1681 GAATGGTGGTTCATAGTAAGTGATGGTAATCTTTTTATTCATGGGTGTAAACCCTTTATAACTTAGTGCTTAAAATATTA
1761 ATCTTTTGATTATATAATGTCCCATGAATTATAGTTTACCAATAGTTCTAAAACATGCTAACCTGACCTTTTCCTTCTAA
1841 TTTGTTTTTAACTTCATTCGAGATAGTACCTCTCACTCACAGATATTTATTTGGTTATCAAGTGAAGATAGGTGTGTCTA
1921 AAAGTGATCTTCTGAATCCTGTCTCCCTAGAGGTACTAGTATCTAGAGTTTACCCAGAAAATTTTATGATTGTAACAAAA
2001 GGAAGTAGTGACTTATGAAGGTTTTGTTTCTTGAATTTTACTTTTGCTACTTGTCCAATAGTGGCTAGTTTATGTTTATC
2081 AATATAGTTATTCACTGTGCCTTAAGTTTATACTTTGTTTATGCAAACTATAAAATTTCCCATAAATGTATTCAAAAAAA
2161 AAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucUCGUUCUGGGGCAGAGAUuu 5'
            ||::| ||||||||||||  
Target 5' gtAGTGAAACCCCGTCTCTAca 3'
1102 - 1123 164.00 -22.70
2
miRNA  3' ucucGU-UCUG-GGGCAGAGAUUu 5'
              || | || : : ||||||| 
Target 5' cacaCACACACATATATCTCTAAa 3'
1326 - 1349 142.00 -7.70
3
miRNA  3' ucUCGUUCUG---------GGGCAGAGAUUu 5'
            ||| ||:|         | ||||| ||| 
Target 5' ttAGCCAGGCGTGGTGGTGCACGTCTGTAAt 3'
1136 - 1166 124.00 -17.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN1167161 14 COSMIC
COSN20111195 32 COSMIC
COSN29467360 32 COSMIC
COSN20085294 33 COSMIC
COSN26466435 34 COSMIC
COSN26572648 35 COSMIC
COSN28901111 46 COSMIC
COSN30532536 48 COSMIC
COSN7227969 52 COSMIC
COSN31592283 62 COSMIC
COSN30141787 67 COSMIC
COSN30480769 74 COSMIC
COSN20111197 728 COSMIC
COSN17118241 1084 COSMIC
COSN8549176 1311 COSMIC
COSN7227970 1321 COSMIC
COSN20111199 1342 COSMIC
COSN21957236 1402 COSMIC
COSN8549177 1724 COSMIC
COSN20092825 1733 COSMIC
COSN23190980 2074 COSMIC
COSN23190163 2089 COSMIC
COSN26584969 2124 COSMIC
COSN22055120 2154 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs772278689 8 dbSNP
rs775649167 10 dbSNP
rs1392108033 11 dbSNP
rs778568602 14 dbSNP
rs923287654 16 dbSNP
rs1281896614 17 dbSNP
rs1344375589 26 dbSNP
rs1218698629 27 dbSNP
rs748738169 29 dbSNP
rs768278595 29 dbSNP
rs770250955 29 dbSNP
rs781535637 29 dbSNP
rs1004694915 30 dbSNP
rs866868313 30 dbSNP
rs139237361 31 dbSNP
rs757688937 31 dbSNP
rs762261746 31 dbSNP
rs763215146 33 dbSNP
rs371353956 34 dbSNP
rs373465295 34 dbSNP
rs562184528 34 dbSNP
rs753700968 34 dbSNP
rs759533088 34 dbSNP
rs768827114 35 dbSNP
rs762132442 36 dbSNP
rs199773964 38 dbSNP
rs750899979 39 dbSNP
rs1490225507 41 dbSNP
rs1279766266 46 dbSNP
rs761782158 46 dbSNP
rs1356202449 47 dbSNP
rs1194392279 50 dbSNP
rs763393585 51 dbSNP
rs139163092 68 dbSNP
rs537120671 84 dbSNP
rs1194943890 90 dbSNP
rs537801469 91 dbSNP
rs184025379 95 dbSNP
rs1314871437 97 dbSNP
rs1053926403 98 dbSNP
rs1438963567 98 dbSNP
rs1396586809 99 dbSNP
rs892631056 108 dbSNP
rs1354734286 113 dbSNP
rs570496776 113 dbSNP
rs1159049214 117 dbSNP
rs144052189 126 dbSNP
rs1401229163 129 dbSNP
rs1403357781 144 dbSNP
rs1157579265 150 dbSNP
rs1164425374 151 dbSNP
rs926018507 152 dbSNP
rs1167315554 153 dbSNP
rs1257427058 157 dbSNP
rs1024712714 165 dbSNP
rs1489278323 176 dbSNP
rs1350670915 186 dbSNP
rs936188753 187 dbSNP
rs1348782128 197 dbSNP
rs1053183416 232 dbSNP
rs1233674668 238 dbSNP
rs913479731 245 dbSNP
rs1291300705 246 dbSNP
rs945018197 249 dbSNP
rs112571405 253 dbSNP
rs1316977809 254 dbSNP
rs1380213974 258 dbSNP
rs1041020820 263 dbSNP
rs1376858009 264 dbSNP
rs79788636 267 dbSNP
rs1448107414 277 dbSNP
rs1281761806 278 dbSNP
rs758431524 286 dbSNP
rs573408624 288 dbSNP
rs900195361 289 dbSNP
rs995825002 292 dbSNP
rs1034015501 295 dbSNP
rs1445567618 302 dbSNP
rs1288776820 305 dbSNP
rs1214113277 318 dbSNP
rs1467830766 326 dbSNP
rs1200493313 329 dbSNP
rs887496275 329 dbSNP
rs952624593 337 dbSNP
rs1269134711 340 dbSNP
rs543523630 346 dbSNP
rs983995426 349 dbSNP
rs1215055260 351 dbSNP
rs908420788 353 dbSNP
rs1442125844 354 dbSNP
rs961174312 375 dbSNP
rs960817273 377 dbSNP
rs1013536416 382 dbSNP
rs1234524449 387 dbSNP
rs972149340 388 dbSNP
rs187338760 394 dbSNP
rs191784433 401 dbSNP
rs1474436711 412 dbSNP
rs757826176 422 dbSNP
rs1379612594 426 dbSNP
rs1181005873 429 dbSNP
rs555644005 436 dbSNP
rs980045766 440 dbSNP
rs926049662 445 dbSNP
rs1050411868 452 dbSNP
rs371523743 462 dbSNP
rs910805644 464 dbSNP
rs936943062 472 dbSNP
rs1438389013 474 dbSNP
rs957414459 478 dbSNP
rs1193585337 480 dbSNP
rs1346444917 481 dbSNP
rs1280380167 487 dbSNP
rs1233177673 488 dbSNP
rs559661562 488 dbSNP
rs913435916 489 dbSNP
rs1399713432 490 dbSNP
rs376880814 493 dbSNP
rs1444737476 502 dbSNP
rs543530405 511 dbSNP
rs1040653729 514 dbSNP
rs1331542523 514 dbSNP
rs1377391109 519 dbSNP
rs1054039470 522 dbSNP
rs1174312867 523 dbSNP
rs1339216112 525 dbSNP
rs1434394459 528 dbSNP
rs1393491622 531 dbSNP
rs922154428 536 dbSNP
rs1470356717 538 dbSNP
rs779655982 540 dbSNP
rs182873307 552 dbSNP
rs145922727 554 dbSNP
rs1355721530 566 dbSNP
rs545437062 567 dbSNP
rs887528661 575 dbSNP
rs1209523248 585 dbSNP
rs1345300266 597 dbSNP
rs1287651046 598 dbSNP
rs772052723 598 dbSNP
rs1351803646 602 dbSNP
rs1279308825 609 dbSNP
rs1449173109 610 dbSNP
rs28678092 619 dbSNP
rs879012486 631 dbSNP
rs1275039878 634 dbSNP
rs1036512721 638 dbSNP
rs1414171203 643 dbSNP
rs1440558446 646 dbSNP
rs528340315 653 dbSNP
rs896346680 663 dbSNP
rs1237793074 669 dbSNP
rs1401105375 669 dbSNP
rs1156582223 671 dbSNP
rs1013817227 686 dbSNP
rs1473774825 687 dbSNP
rs1023567865 694 dbSNP
rs906242215 696 dbSNP
rs1476053680 697 dbSNP
rs1002284578 698 dbSNP
rs1033384540 711 dbSNP
rs1264925150 717 dbSNP
rs905086916 719 dbSNP
rs201152661 721 dbSNP
rs398099289 722 dbSNP
rs56660327 722 dbSNP
rs1033014619 723 dbSNP
rs957360759 724 dbSNP
rs1337586088 730 dbSNP
rs952377325 733 dbSNP
rs1005446729 734 dbSNP
rs187209561 741 dbSNP
rs961206818 742 dbSNP
rs1431826934 748 dbSNP
rs1344827370 750 dbSNP
rs749596657 751 dbSNP
rs1030836935 761 dbSNP
rs538396691 768 dbSNP
rs976627469 772 dbSNP
rs755413528 774 dbSNP
rs1474169559 780 dbSNP
rs1421089649 784 dbSNP
rs954784550 786 dbSNP
rs1474914041 806 dbSNP
rs1239934315 807 dbSNP
rs1214102733 820 dbSNP
rs1339379421 822 dbSNP
rs986614571 826 dbSNP
rs3186771 830 dbSNP
rs1213664462 837 dbSNP
rs530652431 839 dbSNP
rs1297902771 840 dbSNP
rs985037736 843 dbSNP
rs989759773 845 dbSNP
rs1361547252 850 dbSNP
rs1268592397 853 dbSNP
rs558314799 862 dbSNP
rs914128564 863 dbSNP
rs908910088 864 dbSNP
rs1459860604 872 dbSNP
rs1356200387 880 dbSNP
rs868114083 892 dbSNP
rs1170537281 902 dbSNP
rs1427345969 904 dbSNP
rs940323536 907 dbSNP
rs1280922202 911 dbSNP
rs945529485 917 dbSNP
rs369046197 930 dbSNP
rs550649190 939 dbSNP
rs1486570299 955 dbSNP
rs896198457 956 dbSNP
rs1193399119 963 dbSNP
rs1214162285 969 dbSNP
rs1262759435 971 dbSNP
rs1253539146 972 dbSNP
rs1205339531 973 dbSNP
rs949257335 990 dbSNP
rs372060822 1004 dbSNP
rs1046524711 1008 dbSNP
rs905032990 1012 dbSNP
rs191668762 1015 dbSNP
rs771242309 1016 dbSNP
rs893162957 1017 dbSNP
rs937815247 1021 dbSNP
rs1010630382 1027 dbSNP
rs1020381090 1034 dbSNP
rs28403535 1038 dbSNP
rs1174948659 1039 dbSNP
rs888140227 1041 dbSNP
rs976278298 1056 dbSNP
rs546636340 1066 dbSNP
rs1397415727 1067 dbSNP
rs1173422226 1078 dbSNP
rs1015482138 1080 dbSNP
rs1297896614 1082 dbSNP
rs1359530179 1087 dbSNP
rs897040070 1102 dbSNP
rs1249789903 1103 dbSNP
rs985068712 1104 dbSNP
rs759838772 1106 dbSNP
rs1231831785 1107 dbSNP
rs182375809 1115 dbSNP
rs1029533978 1116 dbSNP
rs940384471 1120 dbSNP
rs954013338 1123 dbSNP
rs972109029 1141 dbSNP
rs534772082 1145 dbSNP
rs986255446 1146 dbSNP
rs1018093338 1147 dbSNP
rs1454996705 1150 dbSNP
rs535743613 1158 dbSNP
rs555606450 1159 dbSNP
rs1237695398 1167 dbSNP
rs1190164293 1169 dbSNP
rs1486011119 1176 dbSNP
rs556062816 1178 dbSNP
rs151229938 1179 dbSNP
rs1486958168 1187 dbSNP
rs1351100297 1191 dbSNP
rs1207158368 1196 dbSNP
rs1261152733 1198 dbSNP
rs1044814368 1202 dbSNP
rs1327014712 1211 dbSNP
rs914163793 1220 dbSNP
rs1233401283 1226 dbSNP
rs1354318624 1234 dbSNP
rs1310521618 1238 dbSNP
rs926487068 1239 dbSNP
rs1385221307 1243 dbSNP
rs1194273117 1252 dbSNP
rs1255443428 1257 dbSNP
rs1438338417 1259 dbSNP
rs945643817 1260 dbSNP
rs538489275 1262 dbSNP
rs936491414 1264 dbSNP
rs982768877 1265 dbSNP
rs1381376046 1267 dbSNP
rs928175031 1274 dbSNP
rs1455645701 1277 dbSNP
rs558388724 1279 dbSNP
rs760469424 1283 dbSNP
rs1010245246 1285 dbSNP
rs1185490878 1285 dbSNP
rs570607533 1285 dbSNP
rs1430587970 1286 dbSNP
rs1262623695 1287 dbSNP
rs1385747925 1289 dbSNP
rs201653420 1291 dbSNP
rs901839390 1291 dbSNP
rs116721740 1292 dbSNP
rs11555796 1293 dbSNP
rs953549024 1294 dbSNP
rs1228892828 1295 dbSNP
rs1326667049 1296 dbSNP
rs1006368210 1297 dbSNP
rs1336196909 1298 dbSNP
rs1016536203 1303 dbSNP
rs941035017 1306 dbSNP
rs1328314201 1309 dbSNP
rs1394387310 1309 dbSNP
rs1462480842 1309 dbSNP
rs962570770 1309 dbSNP
rs1463547019 1311 dbSNP
rs1036623379 1313 dbSNP
rs1192800913 1317 dbSNP
rs1240900646 1317 dbSNP
rs1263913509 1319 dbSNP
rs1254725663 1320 dbSNP
rs754437137 1321 dbSNP
rs768973585 1321 dbSNP
rs776468021 1321 dbSNP
rs896819866 1321 dbSNP
rs972342858 1321 dbSNP
rs559058901 1324 dbSNP
rs758329634 1325 dbSNP
rs1306175324 1328 dbSNP
rs1442014098 1329 dbSNP
rs772568222 1335 dbSNP
rs1331057867 1337 dbSNP
rs140847831 1337 dbSNP
rs752318910 1337 dbSNP
rs761665478 1337 dbSNP
rs796795536 1337 dbSNP
rs72664805 1339 dbSNP
rs1029975099 1342 dbSNP
rs1428138415 1344 dbSNP
rs889656446 1352 dbSNP
rs1174048238 1359 dbSNP
rs1251866015 1363 dbSNP
rs1421313916 1364 dbSNP
rs1007107850 1365 dbSNP
rs1053518099 1368 dbSNP
rs1185796829 1376 dbSNP
rs1438299760 1380 dbSNP
rs746576372 1381 dbSNP
rs1460558642 1382 dbSNP
rs1349604384 1388 dbSNP
rs1280527785 1392 dbSNP
rs1235518538 1399 dbSNP
rs1017722348 1402 dbSNP
rs1165041777 1402 dbSNP
rs909726199 1407 dbSNP
rs945324803 1413 dbSNP
rs1463600315 1422 dbSNP
rs1330658596 1424 dbSNP
rs958073925 1428 dbSNP
rs1307508974 1438 dbSNP
rs799493 1442 dbSNP
rs1377521103 1448 dbSNP
rs561688089 1460 dbSNP
rs530614771 1465 dbSNP
rs997506218 1480 dbSNP
rs1422856749 1487 dbSNP
rs1470509322 1497 dbSNP
rs1363089420 1498 dbSNP
rs1050515468 1499 dbSNP
rs889173813 1500 dbSNP
rs1257567660 1506 dbSNP
rs140283348 1509 dbSNP
rs1440325646 1509 dbSNP
rs776385251 1510 dbSNP
rs1016483484 1512 dbSNP
rs1352056900 1513 dbSNP
rs1316217390 1514 dbSNP
rs962231691 1520 dbSNP
rs563946724 1527 dbSNP
rs796366409 1529 dbSNP
rs1357639295 1530 dbSNP
rs994186214 1530 dbSNP
rs578041154 1532 dbSNP
rs982411829 1532 dbSNP
rs1401015482 1533 dbSNP
rs975296560 1534 dbSNP
rs1387845964 1536 dbSNP
rs970817768 1546 dbSNP
rs1476134732 1548 dbSNP
rs1199125868 1549 dbSNP
rs545202581 1552 dbSNP
rs765828701 1575 dbSNP
rs1243435795 1587 dbSNP
rs1218415853 1591 dbSNP
rs775161583 1593 dbSNP
rs535637268 1594 dbSNP
rs1207448325 1598 dbSNP
rs1267864866 1598 dbSNP
rs1337570926 1607 dbSNP
rs928176963 1625 dbSNP
rs957745003 1637 dbSNP
rs560659447 1654 dbSNP
rs1476562510 1659 dbSNP
rs1169052589 1671 dbSNP
rs1373601185 1677 dbSNP
rs533215840 1680 dbSNP
rs765066078 1694 dbSNP
rs527463486 1695 dbSNP
rs1431715028 1704 dbSNP
rs1415168325 1712 dbSNP
rs1364253492 1715 dbSNP
rs959584047 1721 dbSNP
rs547090737 1733 dbSNP
rs149922755 1734 dbSNP
rs941148968 1739 dbSNP
rs535886051 1747 dbSNP
rs1163473929 1759 dbSNP
rs750012801 1764 dbSNP
rs945216170 1764 dbSNP
rs977096033 1770 dbSNP
rs1296339985 1772 dbSNP
rs1036738665 1777 dbSNP
rs918276563 1784 dbSNP
rs549412598 1787 dbSNP
rs1448483625 1789 dbSNP
rs1247862108 1792 dbSNP
rs147620779 1793 dbSNP
rs192666544 1803 dbSNP
rs1213393415 1811 dbSNP
rs1220957271 1812 dbSNP
rs369742211 1815 dbSNP
rs1259183855 1823 dbSNP
rs1487078836 1835 dbSNP
rs1215437494 1840 dbSNP
rs942128306 1841 dbSNP
rs1295132845 1846 dbSNP
rs1442753281 1848 dbSNP
rs1006729210 1860 dbSNP
rs185717938 1861 dbSNP
rs1434176807 1864 dbSNP
rs1355827194 1868 dbSNP
rs1170521050 1870 dbSNP
rs1428784635 1872 dbSNP
rs1167116513 1873 dbSNP
rs1387867389 1873 dbSNP
rs993657789 1875 dbSNP
rs1268704336 1877 dbSNP
rs1491530903 1878 dbSNP
rs1491565535 1879 dbSNP
rs1025660582 1883 dbSNP
rs1205222741 1884 dbSNP
rs906752186 1884 dbSNP
rs374832252 1887 dbSNP
rs1236255890 1900 dbSNP
rs142383819 1903 dbSNP
rs1394393344 1910 dbSNP
rs1033344314 1911 dbSNP
rs1435123026 1912 dbSNP
rs1298258640 1917 dbSNP
rs892969704 1920 dbSNP
rs1011017249 1925 dbSNP
rs146571764 1927 dbSNP
rs1175214375 1954 dbSNP
rs1368340716 1960 dbSNP
rs771571286 1962 dbSNP
rs76897719 1963 dbSNP
rs1430217805 1975 dbSNP
rs1431949291 1977 dbSNP
rs1020682049 1985 dbSNP
rs1183012347 1996 dbSNP
rs1249667634 1999 dbSNP
rs966748441 1999 dbSNP
rs1213356625 2013 dbSNP
rs1003929518 2016 dbSNP
rs1207682310 2017 dbSNP
rs190443771 2017 dbSNP
rs1364222746 2018 dbSNP
rs572739165 2022 dbSNP
rs959857896 2031 dbSNP
rs11555795 2037 dbSNP
rs767264455 2042 dbSNP
rs922517508 2053 dbSNP
rs561349347 2059 dbSNP
rs1236997859 2068 dbSNP
rs1302647843 2068 dbSNP
rs1322326257 2069 dbSNP
rs1365609971 2070 dbSNP
rs1284256143 2071 dbSNP
rs985368882 2075 dbSNP
rs933643835 2079 dbSNP
rs910587136 2083 dbSNP
rs1214678299 2088 dbSNP
rs575153303 2095 dbSNP
rs1409929354 2096 dbSNP
rs1190152410 2097 dbSNP
rs111337475 2102 dbSNP
rs1332469825 2107 dbSNP
rs902907511 2111 dbSNP
rs1188893226 2114 dbSNP
rs1486702240 2116 dbSNP
rs972488208 2117 dbSNP
rs1208083184 2129 dbSNP
rs754055470 2142 dbSNP
rs1454632836 2143 dbSNP
rs563909739 2145 dbSNP
rs918309330 2149 dbSNP
rs533178383 2154 dbSNP
rs571190520 2156 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462573. RNA binding protein: AGO2. Condition:TZM-bl BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucucGU-UCUG-GGGCAGAGAUUu 5'
              || | || : : ||||||| 
Target 5' cacaCACACACAUAUAUCUCUAAa 3'
4 - 27
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462573
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl BaL
Location of target site ENST00000280987.4 | 3UTR | ACACACACACACACAUAUAUCUCUAAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE38226 Liver fibrosis -0.805 5.4e-6 -0.540 5.8e-3 21 Click to see details
GSE28260 Renal cortex and medulla -0.681 5.2e-3 -0.593 1.6e-2 13 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.416 1.9e-2 0.165 2.2e-1 25 Click to see details
GSE42095 Differentiated embryonic stem cells -0.42 2.3e-2 -0.519 5.6e-3 23 Click to see details
GSE26953 Aortic valvular endothelial cells 0.277 9.5e-2 0.293 8.2e-2 24 Click to see details
GSE32688 Pancreatic cancer -0.055 3.8e-1 -0.008 4.8e-1 32 Click to see details
GSE28544 Breast cancer 0.02 4.6e-1 0.193 1.8e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
186 hsa-miR-1303 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT035871 SOAT1 sterol O-acyltransferase 1 1 1
MIRT035872 FHOD3 formin homology 2 domain containing 3 1 1
MIRT035873 RPL7A ribosomal protein L7a 1 1
MIRT035874 NCAPD2 non-SMC condensin I complex subunit D2 1 1
MIRT035875 RPS8 ribosomal protein S8 1 1
MIRT035876 AHNAK AHNAK nucleoprotein 1 1
MIRT035877 ACTB actin beta 1 1
MIRT035878 DEF8 differentially expressed in FDCP 8 homolog 1 1
MIRT035879 MET MET proto-oncogene, receptor tyrosine kinase 1 1
MIRT035880 MED13 mediator complex subunit 13 1 1
MIRT035881 FAT3 FAT atypical cadherin 3 1 1
MIRT035882 HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 1 1
MIRT035883 RPS16 ribosomal protein S16 1 1
MIRT035884 CDK6 cyclin dependent kinase 6 1 1
MIRT035885 GEMIN5 gem nuclear organelle associated protein 5 1 1
MIRT035886 PITRM1 pitrilysin metallopeptidase 1 1 1
MIRT035887 PRRC2A proline rich coiled-coil 2A 1 1
MIRT035888 KIAA0226 RUN and cysteine rich domain containing beclin 1 interacting protein 1 1
MIRT035889 MLLT6 MLLT6, PHD finger containing 1 1
MIRT035890 EIF3I eukaryotic translation initiation factor 3 subunit I 1 1
MIRT035891 FASN fatty acid synthase 1 1
MIRT035892 LEPREL4 prolyl 3-hydroxylase family member 4 (non-enzymatic) 1 1
MIRT035893 HSCB HscB mitochondrial iron-sulfur cluster cochaperone 1 1
MIRT035894 PSME4 proteasome activator subunit 4 1 1
MIRT035895 FRS2 fibroblast growth factor receptor substrate 2 1 1
MIRT035896 ZNF264 zinc finger protein 264 1 1
MIRT035897 HYLS1 HYLS1, centriolar and ciliogenesis associated 1 1
MIRT035898 USP54 ubiquitin specific peptidase 54 1 1
MIRT035899 L1TD1 LINE1 type transposase domain containing 1 1 1
MIRT035900 OR51E2 olfactory receptor family 51 subfamily E member 2 1 1
MIRT053762 CLDN18 claudin 18 3 1
MIRT060730 RPS3 ribosomal protein S3 2 2
MIRT083986 RAB22A RAB22A, member RAS oncogene family 2 2
MIRT098550 TBPL1 TATA-box binding protein like 1 2 6
MIRT134983 TWF1 twinfilin actin binding protein 1 2 4
MIRT136956 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT222065 PURB purine rich element binding protein B 2 2
MIRT239574 UBN2 ubinuclein 2 2 4
MIRT261820 BUB3 BUB3, mitotic checkpoint protein 2 2
MIRT264698 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT308476 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT377481 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT442304 NEU3 neuraminidase 3 2 2
MIRT446083 SLC30A10 solute carrier family 30 member 10 2 2
MIRT449606 PRPF4 pre-mRNA processing factor 4 2 2
MIRT453767 NUCB1 nucleobindin 1 2 10
MIRT455603 SRSF3 serine and arginine rich splicing factor 3 2 2
MIRT455913 KIF2C kinesin family member 2C 2 2
MIRT460091 ZYG11B zyg-11 family member B, cell cycle regulator 2 4
MIRT460866 UBE2S ubiquitin conjugating enzyme E2 S 2 2
MIRT461339 NUP133 nucleoporin 133 2 2
MIRT463769 YOD1 YOD1 deubiquitinase 2 2
MIRT466368 THAP1 THAP domain containing 1 2 4
MIRT467168 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT468703 SDHD succinate dehydrogenase complex subunit D 2 2
MIRT469122 RNF126 ring finger protein 126 2 2
MIRT472426 NCBP2 nuclear cap binding protein subunit 2 2 4
MIRT479420 CDKN1B cyclin dependent kinase inhibitor 1B 2 8
MIRT484260 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT485468 IL6ST interleukin 6 signal transducer 2 10
MIRT490237 H2AFZ H2A histone family member Z 2 6
MIRT491002 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT492127 SUMO2 small ubiquitin-like modifier 2 2 2
MIRT499169 RBPJL recombination signal binding protein for immunoglobulin kappa J region like 2 2
MIRT499825 PCSK9 proprotein convertase subtilisin/kexin type 9 2 8
MIRT501794 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT503441 GINS4 GINS complex subunit 4 2 4
MIRT503688 MAVS mitochondrial antiviral signaling protein 2 5
MIRT506926 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT511430 HOXA10 homeobox A10 2 6
MIRT512415 LAYN layilin 2 4
MIRT513791 NIPAL3 NIPA like domain containing 3 2 4
MIRT516163 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 2 4
MIRT516513 PARK2 parkin RBR E3 ubiquitin protein ligase 2 2
MIRT516915 HINFP histone H4 transcription factor 2 2
MIRT517102 NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 2 2
MIRT517350 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT518019 ABHD15 abhydrolase domain containing 15 2 2
MIRT520945 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT525250 RNF213 ring finger protein 213 2 2
MIRT530634 PPIC peptidylprolyl isomerase C 2 4
MIRT530671 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 4
MIRT531563 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT538205 CYR61 cysteine rich angiogenic inducer 61 2 2
MIRT538419 COLEC10 collectin subfamily member 10 2 2
MIRT541964 ZNF485 zinc finger protein 485 2 2
MIRT543088 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT543257 ZNF662 zinc finger protein 662 2 2
MIRT543589 KIAA1549 KIAA1549 2 2
MIRT543955 RNF20 ring finger protein 20 2 2
MIRT544043 C9orf64 chromosome 9 open reading frame 64 2 4
MIRT548064 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT548240 FBXW7 F-box and WD repeat domain containing 7 2 2
MIRT548442 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT548623 DAZAP1 DAZ associated protein 1 2 4
MIRT548770 COLEC12 collectin subfamily member 12 2 2
MIRT549506 HDDC2 HD domain containing 2 2 4
MIRT551924 AKAP8 A-kinase anchoring protein 8 2 4
MIRT555656 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT556286 MAP3K5 mitogen-activated protein kinase kinase kinase 5 2 2
MIRT557012 HOXD13 homeobox D13 2 4
MIRT563907 CLSPN claspin 2 2
MIRT565527 SON SON DNA binding protein 2 2
MIRT568000 COMMD2 COMM domain containing 2 2 2
MIRT569831 PLA2G16 phospholipase A2 group XVI 2 4
MIRT573905 PARP1 poly(ADP-ribose) polymerase 1 2 2
MIRT616589 KLHL9 kelch like family member 9 2 2
MIRT617137 ZNF556 zinc finger protein 556 2 2
MIRT617400 API5 apoptosis inhibitor 5 2 2
MIRT617455 CCS copper chaperone for superoxide dismutase 2 2
MIRT617799 ZNF793 zinc finger protein 793 2 2
MIRT618190 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT618303 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT618329 ZNF813 zinc finger protein 813 2 2
MIRT618820 PHF20 PHD finger protein 20 2 2
MIRT619153 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT619530 ZNF708 zinc finger protein 708 2 2
MIRT619849 KIR3DX1 killer cell immunoglobulin like receptor, three Ig domains X1 2 2
MIRT620806 SLC26A2 solute carrier family 26 member 2 2 2
MIRT621312 YIPF4 Yip1 domain family member 4 2 2
MIRT621358 GUCA1B guanylate cyclase activator 1B 2 2
MIRT621366 ART4 ADP-ribosyltransferase 4 (Dombrock blood group) 2 2
MIRT621547 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT621883 TAOK1 TAO kinase 1 2 2
MIRT622451 RNF19B ring finger protein 19B 2 2
MIRT623404 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT623587 IPO9 importin 9 2 2
MIRT623974 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT624086 DPP8 dipeptidyl peptidase 8 2 2
MIRT624108 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT632486 RNF8 ring finger protein 8 2 2
MIRT634057 PLIN3 perilipin 3 2 2
MIRT634657 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT640682 MCUR1 mitochondrial calcium uniporter regulator 1 2 2
MIRT641242 CENPN centromere protein N 2 2
MIRT642260 ZNF677 zinc finger protein 677 2 2
MIRT642954 RELA RELA proto-oncogene, NF-kB subunit 2 2
MIRT644326 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT644632 ICA1L islet cell autoantigen 1 like 2 2
MIRT645721 POLR3A RNA polymerase III subunit A 2 2
MIRT647850 LYPLA1 lysophospholipase I 2 2
MIRT649281 NEK8 NIMA related kinase 8 2 2
MIRT650038 VHL von Hippel-Lindau tumor suppressor 2 2
MIRT650354 RRP36 ribosomal RNA processing 36 2 2
MIRT651144 ZNF384 zinc finger protein 384 2 2
MIRT651778 UTP6 UTP6, small subunit processome component 2 2
MIRT652576 TLCD2 TLC domain containing 2 2 2
MIRT654621 PTPRJ protein tyrosine phosphatase, receptor type J 2 2
MIRT656023 MYO5A myosin VA 2 2
MIRT656105 MSRB3 methionine sulfoxide reductase B3 2 2
MIRT657749 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT657924 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT658848 DUSP19 dual specificity phosphatase 19 2 2
MIRT659100 DENND6A DENN domain containing 6A 2 2
MIRT659153 DCX doublecortin 2 2
MIRT660870 ADRBK2 G protein-coupled receptor kinase 3 2 2
MIRT661941 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT663577 C10orf32 BLOC-1 related complex subunit 7 2 2
MIRT664625 WDPCP WD repeat containing planar cell polarity effector 2 4
MIRT666562 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT669992 GPR156 G protein-coupled receptor 156 2 4
MIRT670445 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670853 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671942 SPPL3 signal peptide peptidase like 3 2 2
MIRT674269 LMOD3 leiomodin 3 2 2
MIRT674424 MIOX myo-inositol oxygenase 2 4
MIRT674982 ATP5G1 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9) 2 2
MIRT675038 BACE2 beta-site APP-cleaving enzyme 2 2 4
MIRT675309 C2orf68 chromosome 2 open reading frame 68 2 2
MIRT675641 TTPAL alpha tocopherol transfer protein like 2 2
MIRT688688 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT689369 ZNF101 zinc finger protein 101 2 2
MIRT689605 AKAP6 A-kinase anchoring protein 6 2 2
MIRT691715 LARS leucyl-tRNA synthetase 2 2
MIRT695473 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT695530 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT695878 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT696586 ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 2 2
MIRT703007 HEATR5A HEAT repeat containing 5A 2 2
MIRT707942 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT709765 GPR183 G protein-coupled receptor 183 2 2
MIRT710332 ZNF669 zinc finger protein 669 2 2
MIRT713249 ZFP30 ZFP30 zinc finger protein 2 2
MIRT716613 RBM18 RNA binding motif protein 18 2 2
MIRT733414 BAG2 BCL2 associated athanogene 2 2 0
MIRT756135 THSD7A thrombospondin type 1 domain containing 7A 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-1 Anthocyanin NULL 145858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Caffeic acid NULL 689043 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Ferulic acid NULL 445858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Hesperidin NULL 10621 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-1 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Quantitative real-time PCR myocardial differentiation of mouse ES cells 19521018 2009 down-regulated
miR-1 Sulfonyl-hydrazone-1 (SHZ) NULL NULL Quantitative real-time PCR Murine broblast-derived Induced pluripotent stem cells 21445862 2011 up-regulated
miR-1 Cocaine NULL 446220 Next-generation sequencing ventral striatum 21708909 2011 up-regulated
miR-1 Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 down-regualted
miR-1 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-1 Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 Palmitic acid approved 985 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-1 Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-1 Hydrogen peroxide (H2O2) NULL 784 Quantitative real-time PCR Human umbilical vein endothelial cells 21527937 2011 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-1 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-1 Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR cardia 22889704 2012 up-regulated
miR-1 Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-1 Quinidine approved 441074 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 up-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 down-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR post-infarction rat cardiomyocytes 21220930 2011 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-1 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1303 Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (RKO)
hsa-miR-1303 Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-miR-1303 Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-1303 Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-1303 Rituximab sensitive High Diffuse Large B-Cell Lymphoma cell line (DB, NU-DHL-1, NU-DUL-1, MC-116, SU-DHL-4, SU-DHL-5, FARAGE, HBL-1, OCI-Ly3, OCI-Ly7, OCI-Ly8, OCI-Ly19, RIVA, SU-DHL-8, U2932)
hsa-miR-1303 Etoposide 36462 NSC141540 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Doxorubicin 31703 NSC123127 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Vinorelbine 44424639 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Vincristine 5978 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-miR-1303 Paclitaxel 36314 NSC125973 approved resistant High Colorectal Cancer cell line (HCT8)
hsa-mir-1303 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-mir-1303 Cisplatin 5460033 NSC119875 approved resistant cell line (W1)
hsa-mir-1303 Topotecan 60699 NSC609699 approved resistant cell line (W1)
hsa-mir-1303 Androstenedione+Letrozole resistant cell line (MCF-7)
hsa-miR-1303 Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-1303 Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-1303 Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-1303 Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-1303 Palbociclib 5330286 NSC758247 approved resistant tissue (breast cancer)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-1303 Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-1303 Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-1303 Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-1303 Oxaliplatin 6857599 NSC266046 approved sensitive cell line (IGROV-1)
hsa-miR-1303 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

Error report submission