pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF619   
Synonyms -
Description zinc finger protein 619
Transcript NM_001145082   
Other Transcripts NM_001145083 , NM_001145093   
Expression
Putative miRNA Targets on ZNF619
3'UTR of ZNF619
(miRNA target sites are highlighted)
>ZNF619|NM_001145082|3'UTR
   1 GCCCCGTCACGTTCTCAAAATCCTTTGCACCTCAAGTTAGGGATTCCACTGGTCTCCTGATTGTGTCTATTGATATTCCT
  81 CTGGTCTTGTCTTGTATAAGTTGTTACTGTTTTCCTAACTTCATTTTAAATTCTCACGCTTAAGGACCATGTTTGATTAG
 161 TTTCTTTTATCCCCCGGTAGGAAATGGCAGTACTTATTCTTTATCGTGTCCACATTTGGGCTGTATTATCAGTCTGCATC
 241 TCTCTTCTGGGGCTACTGGAGTTGGAAGAGTTTGCAGAACATTTTGGGGTTTAGGGCATATGGCATTATGATTATGATGA
 321 GATGGGGCATTATAATTAGAGACTAGGAGAAATGCAAAGCCTATGGGAGAACATAATCAGATAAAGTGTCCAATGATTGC
 401 TTTCAAGAGCTTTTTTTTTTTTAGGGGGTGGGGGGTGGTGCCGGAGTTTCACTCTTGTCACCCAGGCTGTTTGCAGTGGT
 481 GTGATCTTGGCTCACTGCAACCTCTGCCTCCAGGGTTCAAGTGATTCTCATGCCTCAGCCTCCCGAGTAGCTGGGACCAC
 561 AGGCATGCACCACCACGCCCCGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAA
 641 AATCCTGACCTCAGGTGATTCACCTGCCTCAGTCTCCCAAGTGCTGGGATTACAGGCATGAGCCACTGCATCTGGCCTGC
 721 TTTCAGGAGTTAAGGAGGGCCATTTGGTGGACCAGGGGCAAGGCTCACTGAAAGAATGTAAGACTTGGAATTTTTTATTA
 801 CCTTGATAGTATAAAAAATTATGAGGGTCCTTTTATGCAAAAAGAAAATGAAGTGATGAGTTGGCATTGATAGCAATAAT
 881 GTAAAATTATGTCTTTGAGCTTTATTGGAAGGGGATATGGTTTTTCAATTTGGGTTCCTTCTCTATTTTCATTTTCCTTT
 961 TTTTTTTGAGACAGGTTCTTGTTCTGTCATCCAGGCTGGATTGCAGTAGTGCGATCATGGATCACTGCAGTGTGTTGACC
1041 TTCCAGGCTCAAGCAATCCTCCCACCTCAGCTTCCCAAGAAGCTGGGAGGTAGTGCAGCCTCCCAGTTTCTCAGAGGGCT
1121 GAGGTGGGAGGATTGCTTGAGCCCTGGGGGCATACACCACCACACCCAGCTAATTTTTGTATTTTTTGTAGAGACAGAGT
1201 TTTGCCATGTTGCCCAGGCTGGTCTCAAAACTCCTGGACTCAAATGATCCTCCCACTTCAGCCTCCCAAAGTGCTGGGAT
1281 TACAGGCTTGAGCCACCATGTCCAGCCTCTATTCCTTTTCATATCTGTTGAATTTCAGTACCCACTCATATATGTAGGTA
1361 CAAAAAGTGACTTGGACTTGTACCCTTTAGGGTAGATGCCTGAGTATAGTAATCTCTAAAGCTGTACATGGATGGAACTT
1441 GTTGGCATCACACTGGTGAGCACCAGAGGCAAAGAAGAGAAACCTGACCATGACTTGCTGTAGTTTCTCAGAAGTGAGTC
1521 CATTCCTGATGAGTTACTATGCAGGCCCTTGGATATGTCCTCACACCTACTCCAGATTTCCCTATGATTAAATCTGAATT
1601 TTATTGGTGGCACTTTTAAATTAGTTTTATAAAGAACTGTTTTGATGACACCAAGAAATGTTTTCAGTGTGCAGATTGCT
1681 ATTGTTTGAATATCCCCAGCAAAATTCTTGTTGAAACTTAATCCCCATTGTAACAGTACTGGGTGGGGGGTCTTTAAGAG
1761 GTGATCAGGATTAGCCAAGTTCATCAGGGTGGAGCCTCCATGATGGGACTGGTGGCTTTATGAGGAGAGGAAGAGCAACT
1841 GGAACTGGGACACATGCTTGCTCTGTCTTGCCTTTTGATGCCTCCTGCCATGTCATGATGCAGCAAGTAAGCCCTTACCA
1921 GATGCCTGCACCTTTATATTGGACTTCTTAGCCTTCAGAACTGTGAACTAAATAAACCTCTATTCTGTATAAATTAAAAA
2001 AAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            ||| ||   ||||||||| 
Target 5' tgATCCTCCCACTTCAGCCTc 3'
1245 - 1265 160.00 -20.00
2
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             || | | ||||||| 
Target 5' ttcTCATGCCTCAGCCTc 3'
525 - 542 151.00 -17.20
3
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            ||| ||   | |||||:| 
Target 5' caATCCTCCCACCTCAGCTTc 3'
1054 - 1074 136.00 -15.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN27006352 7 COSMIC
COSN228983 12 COSMIC
COSN30151810 17 COSMIC
COSN30468892 24 COSMIC
COSN30473726 26 COSMIC
COSN31509206 52 COSMIC
COSN31514210 68 COSMIC
COSN23016330 87 COSMIC
COSN31596553 119 COSMIC
COSN1083414 133 COSMIC
COSN1083413 134 COSMIC
COSN1083412 184 COSMIC
COSN15661384 253 COSMIC
COSN27312721 423 COSMIC
COSN25014895 933 COSMIC
COSN22736968 936 COSMIC
COSN22859393 1218 COSMIC
COSN25021375 1364 COSMIC
COSN9550831 1740 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1220985974 3 dbSNP
rs1011076170 5 dbSNP
rs115926534 6 dbSNP
rs143276223 7 dbSNP
rs570092063 8 dbSNP
rs760862105 11 dbSNP
rs374778153 12 dbSNP
rs539086718 23 dbSNP
rs374714125 28 dbSNP
rs1178242089 29 dbSNP
rs765647998 34 dbSNP
rs750951068 35 dbSNP
rs777365875 36 dbSNP
rs1444309349 38 dbSNP
rs759038611 41 dbSNP
rs779691807 46 dbSNP
rs369040909 50 dbSNP
rs972176326 55 dbSNP
rs1178402999 58 dbSNP
rs920356678 59 dbSNP
rs1260726542 64 dbSNP
rs532915384 66 dbSNP
rs1208823698 71 dbSNP
rs999099729 84 dbSNP
rs985914244 94 dbSNP
rs570333087 95 dbSNP
rs879940446 97 dbSNP
rs1249433246 98 dbSNP
rs1351403889 104 dbSNP
rs1031506819 121 dbSNP
rs944561043 127 dbSNP
rs965177373 138 dbSNP
rs768769920 139 dbSNP
rs1446134367 146 dbSNP
rs976835538 171 dbSNP
rs535646137 176 dbSNP
rs774125873 177 dbSNP
rs1378967520 188 dbSNP
rs924531281 195 dbSNP
rs935338789 198 dbSNP
rs116143397 207 dbSNP
rs1482731136 214 dbSNP
rs1457772243 222 dbSNP
rs893870426 235 dbSNP
rs1242401014 236 dbSNP
rs1037686203 262 dbSNP
rs1322674978 272 dbSNP
rs1404114451 281 dbSNP
rs928149491 283 dbSNP
rs1246655706 289 dbSNP
rs1323250184 294 dbSNP
rs1011022469 297 dbSNP
rs572714058 317 dbSNP
rs115130932 326 dbSNP
rs1299071582 333 dbSNP
rs1401894193 340 dbSNP
rs1003723577 342 dbSNP
rs1358722648 343 dbSNP
rs1298080930 354 dbSNP
rs199683117 360 dbSNP
rs796537199 361 dbSNP
rs558333395 363 dbSNP
rs1163108186 371 dbSNP
rs80138817 377 dbSNP
rs1195462645 379 dbSNP
rs1419751937 379 dbSNP
rs1228431341 383 dbSNP
rs1476528905 384 dbSNP
rs1261881227 394 dbSNP
rs1223051303 399 dbSNP
rs993162427 408 dbSNP
rs1027763717 409 dbSNP
rs1220512514 411 dbSNP
rs1407914283 411 dbSNP
rs879692096 411 dbSNP
rs1208982921 423 dbSNP
rs1279015937 426 dbSNP
rs998819242 427 dbSNP
rs951729389 429 dbSNP
rs1277658953 430 dbSNP
rs990150783 430 dbSNP
rs543806694 431 dbSNP
rs1175269268 432 dbSNP
rs1407105688 433 dbSNP
rs1355504856 436 dbSNP
rs914635929 437 dbSNP
rs562591742 444 dbSNP
rs1161348820 455 dbSNP
rs1463743496 458 dbSNP
rs1427257657 470 dbSNP
rs1422216420 475 dbSNP
rs1469418248 479 dbSNP
rs1199497312 490 dbSNP
rs1434436523 491 dbSNP
rs997951140 494 dbSNP
rs576306289 503 dbSNP
rs151269066 513 dbSNP
rs1480811704 516 dbSNP
rs1361129764 520 dbSNP
rs1259757036 523 dbSNP
rs1200695348 525 dbSNP
rs976353987 527 dbSNP
rs561905122 531 dbSNP
rs934595461 533 dbSNP
rs1052432227 535 dbSNP
rs1332959474 537 dbSNP
rs1299758726 539 dbSNP
rs773110608 540 dbSNP
rs1386740285 542 dbSNP
rs1378027634 543 dbSNP
rs527510919 545 dbSNP
rs915215597 546 dbSNP
rs1399050448 550 dbSNP
rs1172846775 559 dbSNP
rs1467085139 561 dbSNP
rs1412184180 564 dbSNP
rs946715304 571 dbSNP
rs547081462 577 dbSNP
rs1167059523 578 dbSNP
rs765180143 582 dbSNP
rs973006705 583 dbSNP
rs1202116948 594 dbSNP
rs1201271132 609 dbSNP
rs928182194 611 dbSNP
rs1233092356 612 dbSNP
rs866829793 619 dbSNP
rs1003714393 620 dbSNP
rs1057059732 632 dbSNP
rs1444994634 634 dbSNP
rs898065589 656 dbSNP
rs1334353406 658 dbSNP
rs182609551 688 dbSNP
rs765868565 690 dbSNP
rs1419849836 692 dbSNP
rs1027926142 695 dbSNP
rs1382061539 697 dbSNP
rs1156830556 698 dbSNP
rs915668507 701 dbSNP
rs1368867202 726 dbSNP
rs887404947 738 dbSNP
rs1188431966 744 dbSNP
rs138793821 752 dbSNP
rs1254410181 754 dbSNP
rs1199941516 760 dbSNP
rs1427480556 764 dbSNP
rs1007188744 788 dbSNP
rs1017300354 792 dbSNP
rs1353352932 802 dbSNP
rs1285168049 813 dbSNP
rs187264488 815 dbSNP
rs140518106 819 dbSNP
rs975921239 822 dbSNP
rs904217783 824 dbSNP
rs868563441 827 dbSNP
rs1333142593 841 dbSNP
rs934303021 845 dbSNP
rs1361925523 853 dbSNP
rs549771148 854 dbSNP
rs1419027909 862 dbSNP
rs990446893 866 dbSNP
rs570220442 867 dbSNP
rs753404820 872 dbSNP
rs1164770232 873 dbSNP
rs1471728710 874 dbSNP
rs191840370 891 dbSNP
rs549436895 894 dbSNP
rs1215009681 907 dbSNP
rs1435071367 913 dbSNP
rs1488241574 914 dbSNP
rs75248977 915 dbSNP
rs751913994 916 dbSNP
rs1354745523 920 dbSNP
rs1369164562 924 dbSNP
rs757587432 935 dbSNP
rs1310000814 941 dbSNP
rs1341764305 946 dbSNP
rs867262842 951 dbSNP
rs535278898 952 dbSNP
rs1275776308 956 dbSNP
rs1398916089 957 dbSNP
rs1325494237 958 dbSNP
rs1331610395 958 dbSNP
rs1403337815 959 dbSNP
rs558245866 961 dbSNP
rs1056566440 967 dbSNP
rs961423204 972 dbSNP
rs1466346806 975 dbSNP
rs1207057483 976 dbSNP
rs1475149271 979 dbSNP
rs1247777307 987 dbSNP
rs1201676295 990 dbSNP
rs1323100617 1003 dbSNP
rs1450195899 1008 dbSNP
rs530079077 1013 dbSNP
rs1198823823 1014 dbSNP
rs1450998434 1016 dbSNP
rs578149117 1018 dbSNP
rs1217456193 1030 dbSNP
rs1248507532 1041 dbSNP
rs537023855 1043 dbSNP
rs1276498343 1048 dbSNP
rs766082566 1051 dbSNP
rs1188151732 1054 dbSNP
rs929493532 1062 dbSNP
rs541822206 1066 dbSNP
rs1448804495 1071 dbSNP
rs750933016 1080 dbSNP
rs1168861997 1088 dbSNP
rs888063330 1091 dbSNP
rs1007177359 1094 dbSNP
rs1425999403 1095 dbSNP
rs1174758579 1098 dbSNP
rs756755264 1100 dbSNP
rs916789685 1107 dbSNP
rs1252991750 1114 dbSNP
rs1406435530 1117 dbSNP
rs946863916 1118 dbSNP
rs901580629 1123 dbSNP
rs1235960224 1129 dbSNP
rs978559853 1134 dbSNP
rs1312192348 1139 dbSNP
rs997644092 1144 dbSNP
rs1217024071 1145 dbSNP
rs560217165 1150 dbSNP
rs1309936340 1152 dbSNP
rs956026092 1153 dbSNP
rs1374415640 1159 dbSNP
rs1329514183 1160 dbSNP
rs934357188 1163 dbSNP
rs990005633 1166 dbSNP
rs1336234685 1169 dbSNP
rs1052686962 1174 dbSNP
rs901099061 1181 dbSNP
rs1159839331 1182 dbSNP
rs1021550924 1192 dbSNP
rs1378853155 1193 dbSNP
rs1049624186 1199 dbSNP
rs1296348435 1200 dbSNP
rs969988475 1201 dbSNP
rs980756836 1207 dbSNP
rs1207373994 1210 dbSNP
rs1485086373 1212 dbSNP
rs1286587637 1214 dbSNP
rs1218743988 1217 dbSNP
rs1230290372 1219 dbSNP
rs1312674824 1220 dbSNP
rs9862493 1221 dbSNP
rs1380162516 1223 dbSNP
rs1286219757 1226 dbSNP
rs897201319 1233 dbSNP
rs374269373 1235 dbSNP
rs1422071581 1248 dbSNP
rs573986178 1263 dbSNP
rs992613457 1264 dbSNP
rs1035059362 1287 dbSNP
rs1158826112 1288 dbSNP
rs542086527 1289 dbSNP
rs1415480553 1293 dbSNP
rs1208190448 1296 dbSNP
rs929457781 1298 dbSNP
rs1474571744 1301 dbSNP
rs1049257640 1310 dbSNP
rs1248831562 1317 dbSNP
rs1487261081 1320 dbSNP
rs1260143377 1321 dbSNP
rs1466436883 1323 dbSNP
rs1323338157 1325 dbSNP
rs1182028639 1330 dbSNP
rs888010872 1338 dbSNP
rs943652211 1339 dbSNP
rs1039273965 1341 dbSNP
rs991100825 1343 dbSNP
rs1368222537 1344 dbSNP
rs1473370234 1350 dbSNP
rs1165497363 1353 dbSNP
rs1278903630 1354 dbSNP
rs1401994686 1361 dbSNP
rs1406446254 1362 dbSNP
rs1024290067 1366 dbSNP
rs901479928 1372 dbSNP
rs1352014194 1373 dbSNP
rs968264041 1381 dbSNP
rs997193176 1382 dbSNP
rs1436804407 1385 dbSNP
rs66841330 1392 dbSNP
rs891584691 1401 dbSNP
rs571869055 1402 dbSNP
rs6762251 1405 dbSNP
rs1476578938 1409 dbSNP
rs1245260452 1419 dbSNP
rs1285814312 1426 dbSNP
rs1157218431 1427 dbSNP
rs934371563 1429 dbSNP
rs1489319496 1430 dbSNP
rs1244774294 1431 dbSNP
rs1212896397 1434 dbSNP
rs1348494090 1440 dbSNP
rs988516325 1443 dbSNP
rs1021499568 1448 dbSNP
rs1268827534 1449 dbSNP
rs922306092 1456 dbSNP
rs779022982 1459 dbSNP
rs1370110269 1465 dbSNP
rs563809280 1469 dbSNP
rs933644145 1473 dbSNP
rs1207905121 1475 dbSNP
rs532877503 1483 dbSNP
rs1400535500 1494 dbSNP
rs1049687917 1500 dbSNP
rs969894754 1510 dbSNP
rs911103643 1513 dbSNP
rs1001429651 1515 dbSNP
rs1176624691 1529 dbSNP
rs1035609856 1544 dbSNP
rs1434819215 1548 dbSNP
rs1265259479 1558 dbSNP
rs960958635 1575 dbSNP
rs1255811729 1588 dbSNP
rs1238960788 1594 dbSNP
rs992206784 1595 dbSNP
rs1200763868 1596 dbSNP
rs1479675967 1597 dbSNP
rs1443298230 1600 dbSNP
rs919332635 1613 dbSNP
rs950852867 1621 dbSNP
rs1038575363 1631 dbSNP
rs762635070 1644 dbSNP
rs1301967670 1653 dbSNP
rs1231630969 1656 dbSNP
rs543186113 1657 dbSNP
rs748450079 1659 dbSNP
rs896985505 1678 dbSNP
rs984910654 1682 dbSNP
rs909355999 1695 dbSNP
rs1302890001 1701 dbSNP
rs1467197463 1720 dbSNP
rs1393182739 1731 dbSNP
rs563270948 1731 dbSNP
rs528925484 1738 dbSNP
rs943557178 1746 dbSNP
rs1180692823 1748 dbSNP
rs1023903252 1750 dbSNP
rs1039219961 1760 dbSNP
rs796773886 1762 dbSNP
rs1458422385 1770 dbSNP
rs923552906 1773 dbSNP
rs1031625000 1774 dbSNP
rs771821165 1775 dbSNP
rs570929714 1777 dbSNP
rs1396349728 1788 dbSNP
rs1354811407 1790 dbSNP
rs1335960039 1793 dbSNP
rs549640097 1796 dbSNP
rs1011305106 1798 dbSNP
rs6599105 1802 dbSNP
rs922337183 1808 dbSNP
rs905655376 1810 dbSNP
rs1001377246 1818 dbSNP
rs770868791 1825 dbSNP
rs1373102257 1831 dbSNP
rs528652406 1834 dbSNP
rs1362431845 1836 dbSNP
rs1156561790 1840 dbSNP
rs1469497206 1844 dbSNP
rs1363423704 1847 dbSNP
rs1188521518 1854 dbSNP
rs1425561817 1856 dbSNP
rs1255530357 1860 dbSNP
rs1221780455 1868 dbSNP
rs1488888196 1872 dbSNP
rs960023436 1873 dbSNP
rs955057316 1874 dbSNP
rs1350429870 1878 dbSNP
rs1013985434 1896 dbSNP
rs1246575774 1908 dbSNP
rs1026341888 1925 dbSNP
rs1346015804 1927 dbSNP
rs911147978 1928 dbSNP
rs754404509 1929 dbSNP
rs941233542 1931 dbSNP
rs950732191 1933 dbSNP
rs776140576 1942 dbSNP
rs145788921 1945 dbSNP
rs1164006906 1952 dbSNP
rs1056580786 1957 dbSNP
rs1416016830 1966 dbSNP
rs1164303544 1978 dbSNP
rs909301834 1980 dbSNP
rs1478224768 1986 dbSNP
rs896543916 1999 dbSNP
rs1191674469 2003 dbSNP
rs964813376 2004 dbSNP
rs1254609336 2008 dbSNP
rs759001207 2014 dbSNP
rs1473247209 2019 dbSNP
rs1196166139 2024 dbSNP
rs1218695512 2026 dbSNP
rs1376663984 2035 dbSNP
rs1319401976 2039 dbSNP
rs1268276963 2050 dbSNP
rs1429971927 2064 dbSNP
rs1331419966 2067 dbSNP
rs1012257982 2091 dbSNP
rs1438533328 2096 dbSNP
rs1392543370 2113 dbSNP
rs1164500639 2118 dbSNP
rs1045432995 2131 dbSNP
rs1421782122 2135 dbSNP
rs1166615997 2137 dbSNP
rs1475361675 2141 dbSNP
rs923501586 2145 dbSNP
rs933618606 2147 dbSNP
rs1053795873 2154 dbSNP
rs1467460557 2156 dbSNP
rs1251926005 2163 dbSNP
rs1031239552 2164 dbSNP
rs1439000892 2202 dbSNP
rs1270297191 2215 dbSNP
rs184385662 2227 dbSNP
rs947039411 2228 dbSNP
rs1042793181 2231 dbSNP
rs1427515243 2233 dbSNP
rs138451797 2236 dbSNP
rs1029377757 2238 dbSNP
rs143013771 2244 dbSNP
rs985143389 2262 dbSNP
rs1356547509 2286 dbSNP
rs910915280 2289 dbSNP
rs557202678 2291 dbSNP
rs1409525956 2293 dbSNP
rs567648739 2294 dbSNP
rs536259757 2300 dbSNP
rs1176093595 2303 dbSNP
rs974423752 2307 dbSNP
rs895707623 2313 dbSNP
rs1178811366 2315 dbSNP
rs555194488 2316 dbSNP
rs568766461 2329 dbSNP
rs1230855953 2334 dbSNP
rs929808479 2340 dbSNP
rs1442513517 2358 dbSNP
rs994070055 2359 dbSNP
rs1026000543 2373 dbSNP
rs1208681846 2374 dbSNP
rs536256277 2384 dbSNP
rs948176219 2386 dbSNP
rs1170253776 2391 dbSNP
rs1375794528 2393 dbSNP
rs1006183109 2394 dbSNP
rs1045147059 2399 dbSNP
rs1441493720 2404 dbSNP
rs1315306132 2405 dbSNP
rs903880262 2405 dbSNP
rs1016293710 2408 dbSNP
rs572029372 2412 dbSNP
rs964803541 2417 dbSNP
rs1375422871 2419 dbSNP
rs975305747 2423 dbSNP
rs1402873054 2443 dbSNP
rs1030472567 2448 dbSNP
rs61234363 2450 dbSNP
rs749548691 2450 dbSNP
rs1268712079 2453 dbSNP
rs779292706 2454 dbSNP
rs868203187 2455 dbSNP
rs1259036211 2462 dbSNP
rs1206317326 2472 dbSNP
rs989039936 2484 dbSNP
rs1286735771 2485 dbSNP
rs1490008291 2490 dbSNP
rs1217662183 2491 dbSNP
rs1314922639 2493 dbSNP
rs913495347 2495 dbSNP
rs540791453 2500 dbSNP
rs1433333302 2513 dbSNP
rs1200531832 2515 dbSNP
rs1413053548 2521 dbSNP
rs978463893 2524 dbSNP
rs1129200 2526 dbSNP
rs1448580198 2529 dbSNP
rs1018007885 2533 dbSNP
rs1343837607 2534 dbSNP
rs1157856921 2535 dbSNP
rs1405571666 2538 dbSNP
rs1419628247 2542 dbSNP
rs937101712 2547 dbSNP
rs1372277256 2552 dbSNP
rs1057297201 2554 dbSNP
rs577787347 2567 dbSNP
rs1456313426 2569 dbSNP
rs929801008 2573 dbSNP
rs1292911739 2578 dbSNP
rs1162167090 2579 dbSNP
rs962713485 2580 dbSNP
rs973736119 2592 dbSNP
rs1388658602 2596 dbSNP
rs1046939430 2616 dbSNP
rs888395900 2617 dbSNP
rs992074874 2618 dbSNP
rs1222088994 2621 dbSNP
rs1335680308 2623 dbSNP
rs1275353026 2628 dbSNP
rs543498265 2629 dbSNP
rs1006174625 2632 dbSNP
rs1295589416 2636 dbSNP
rs947898826 2651 dbSNP
rs1364770309 2656 dbSNP
rs145168066 2658 dbSNP
rs925366760 2666 dbSNP
rs900524882 2671 dbSNP
rs996254824 2673 dbSNP
rs1396206041 2678 dbSNP
rs1323497981 2680 dbSNP
rs138362463 2684 dbSNP
rs533621492 2688 dbSNP
rs149250446 2693 dbSNP
rs1426638908 2694 dbSNP
rs1418759828 2703 dbSNP
rs1191550129 2715 dbSNP
rs1051956022 2719 dbSNP
rs1255052935 2720 dbSNP
rs118167434 2721 dbSNP
rs1468054960 2724 dbSNP
rs889309022 2725 dbSNP
rs1008343389 2736 dbSNP
rs1018456602 2738 dbSNP
rs1295569545 2748 dbSNP
rs968982590 2749 dbSNP
rs1300753336 2758 dbSNP
rs1439733937 2759 dbSNP
rs1396826276 2761 dbSNP
rs898211063 2762 dbSNP
rs995174349 2764 dbSNP
rs1353840678 2765 dbSNP
rs1488487486 2771 dbSNP
rs879442396 2773 dbSNP
rs926916078 2774 dbSNP
rs750826825 2778 dbSNP
rs1192831970 2785 dbSNP
rs992104274 2786 dbSNP
rs992551649 2794 dbSNP
rs1024879065 2797 dbSNP
rs1464180340 2799 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguaGAAGGA-AGUCGGAg 5'
              | |||| ||  |:| 
Target 5' ---cCCUCCUCUCCCCUUc 3'
1 - 16
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_001145093 | 3UTR | CCCACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_001145093 | 3UTR | UCCCACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_001145093 | 3UTR | CCCACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903832
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_b
Location of target site NM_001145093 | 3UTR | CUCAGCCUCCCGAGUAGCUGGGACCACAGGCAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001145093 | 3UTR | UCCCACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001145082 | 3UTR | CUCCCACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001145082 | 3UTR | CACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_001145093 | 3UTR | CACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_001145093 | 3UTR | CACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_001145093 | 3UTR | CCUCCCACUUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 11 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000447116.2 | 3UTR | CCCUCCUCUCCCCUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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