miRTarBase - #MIRT486621


—
pre-miRNA Information
pre-miRNA hsa-mir-3622b   
Genomic Coordinates chr8: 27701673 - 27701767
Description Homo sapiens miR-3622b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3622b-3p
Sequence 58| UCACCUGAGCUCCCGUGCCUG |78
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1232922758 2 dbSNP
rs530939348 5 dbSNP
rs1439657384 10 dbSNP
rs1157333896 12 dbSNP
rs66683138 14 dbSNP
rs1044808718 15 dbSNP
rs946438979 19 dbSNP
rs551845360 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PDK3   
Synonyms CMTX6, GS1-358P8.4
Description pyruvate dehydrogenase kinase 3
Transcript NM_001142386   
Other Transcripts NM_005391   
Expression
Putative miRNA Targets on PDK3
3'UTR of PDK3
(miRNA target sites are highlighted)		 
>PDK3|NM_001142386|3'UTR
   1 AGGACTGAATGCTGTGGTCCTCTCTGTGAAGAAAGATTGCCTTCTGCAAGTCAAACAGAGAGAACTGCTTTCTCCCACCT
  81 GCTCTGAGCGTGGCATCACAGTTATTCCTAGTGCTTAAATGTGTATTTTCTCTCTACCACCTGGACTTTCCCAAAGAGTT
 161 TTTCCTGTAGCTACTCCAGATCTTCCACTAAAGTAGTAACTTTTTAATGACATCTTGCTGTGGTGTGATTGATGCCTGTC
 241 ACCGAAGAGCACAGAGCCTCCTTACAGCTCTTGTGCCCTCGTACTCTCCATCTTGTTATCATAGCATCTGATGTCTTCAG
 321 TCCTTCCAGGATTCTGTGCGCCTTTCCCATTCCAGATACAGCAGATCGTACTGTTGCTCCTTGTGACCAAATACCATATT
 401 TGTCCCAAACCTCCACCTAGGGCCCTGGGACCCTGAAAGTGGAAGACATCAGGTGGCCATGCCCTGATGATTTAGTCCCA
 481 GAGCCCTCCGTCTCTCCCGTGCCTCCCTCCGCCACTCTATGATTTAGACTTTTGCCTTCTTCCATCTGATCGGATTCTCA
 561 TTGTGAGATGTGGTGACTTTCATGTTAGATCTTCTTCATTGATGCCTTGGTTTTATTTTAAAATTCATTTGTATATGTCT
 641 GTTGATTAAAGCATTCGAAATGTTATCTTAGAATTTTTCACCCAACTGCTTGGTTTCAAAGATCTTAAGTGAAAAACTGC
 721 CTCCTGGTCAATACCAAATTTGTACAGAGTGTGAAGTGGAGTTTTTATGCTTCTGTCAAACTTCCATCCATCTAATACTG
 801 TACCTGTGTCATATTTTATTCCTTTGTAGTCTTCTAAGGAATTGGAAGTTTCTGTATGATGCGCTTTACTAGTTGTAAAA
 881 TAGACTATCAGAGGGAAAAGGCCTCTCTAGTTTATTTTTGAAAAATGCTCCAGGTCTTAATAATTTTCATTTTCATTCAT
 961 CTTAGTTTTAGAATTGTCACCTCAGTCTGATTTTCACAATCCTTTTTGCTAAAAGTTGGAAGTGGGAATTAGCAGACGAT
1041 TTGGGATAAGGAAAGAGGAATGATGTTATATTTACCCTTAGGAATAGAAGTGACCGAAGAATCCGGATTGAAACCAGCAT
1121 CCTATATACAGCTCCACAGGATGTGCTTCTCTTCATGGTAATTTTCCATATATATCATCTACTTTGATTTCTGCCCCGTT
1201 TTAATGTCCATATAAATGTTTCAGTCCAATTTGTAAGTGTTGAGTCCACTGATGTAGAAGTTCTGACTTGTAAACCATTC
1281 ATCCTGCTTTAGTCATATGATAGTACCGATGCAATTAGCTCCTCTCCCACCACCGTGGGGGATTTCTCCCTGAGATGAGG
1361 TGTGCTTTGACCAGCTGCATGTGGCTTGATTGCATTCCTGTTTCTCTTAGTTCCACTGGATCTTGTTTTCTTTTATTTCG
1441 TTATATTACCTGAGCTCAGGGTAGTTCCGTTCATCTTTAGAAAGAGCTCATCTCTTCCATCCTTAGAAGGATCTCATCAG
1521 AGAACTCATATGTAATCAATCAGGTAAAAGAAATACTGATGTACTTCTGAGAGACTGGTGAGAGGTGGGTCATAGGAAGC
1601 CCATAGGTCTGAGGACCGAGTCAGTGTCTTGGGGATGGGGCTGTTCCATATGATTATTTTTGTGTGGCATAAAAGATGTA
1681 AAAAAAAAAAAAAATGGTCCTTTACATGCAAAGACCCTAGCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
1761 TTTGAGACACAGTTTCACTCTGTCCCCTAGGCTGGAGTGCAGTGGCACCATCTCGGCTCACTGCAACCTCCGCCTCCCAG
1841 GTTCAAGCAATTCTTGTGCCTCAGCCTCCCGAATAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAGTTTTTGTA
1921 TTTTTTTGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGACCTACCCACCTCAG
2001 CCTCCCATAGTGCTGGGATTACAGGTTCGAGCCACTGCGCCCAGCCGACCCTAGCTTCCTTATAAACATGAGATAATATC
2081 TTCCTAGGCCTCAATTTCCAACGATACTCCTTTATGCTTTCAAGTGTGATACACTGTAGGAGAGAGGAGGCAGCAGTTTA
2161 GGGGGTGCTGCCTACTGCCTGACTCTGACAGCGTTTCTCTTGTTTGAGGAAGGCCCATCGATCACCACATCCTCACAAGC
2241 AGTACCATGTAAGGGGCCGAATATGGATAATATGGTGTAGAAAAATCTCATCACATTCTTCCCTTTACAAGTGTTTTTCA
2321 AAAGTAAAGATTGATTTCAGTGTCTTCATGACTTAATCGGTAGTTCTTTACTAGCACGCTTTTTGGCTTACTCACATCCA
2401 TCTGACCCCAGTACAACCTTGCTTCTCCTGTCTTTGTTTTCTTCATTAAGAATTTATCTTTAACCCTAAAGCAACTGCAA
2481 GAAGAGTTTCAGGAACATCTGTGTTCTTCTGGCTTACTAGCCTCTTTACCCAAGTATTCATTTATCCTGTTTGTCAACTG
2561 TACATGATTCTTTTAATTTAGGCAGAGAATCTGGCTGTTTACTGGGTTTGCCTATAAGCAAATGGTCAGATTTCCCCCAT
2641 ATAGGTTGTAACACAAATAGACATGGACCCTTTTTCAGCTAAATTCTTTCCCATTCCTCTGTACTGCTCTTTCATTTACT
2721 CTATTTTATTTTAAGTGGGGACTGTGTCTATTTAAAATAGTGCCTGACACATAGTAGGTGCTTAATAAACAATGTTAATA
2801 AATAATATTAAAATAATGAATAATATTCATAAATAGTAGGTGAATCAAAGATAGAAAACTGTCAGACATTTTCCTTGGGT
2881 GGTAGGGCAACATCTTTCTAAGTTCTTAAACCATCCTTGTCTCTAAATTAAAAATATGGAAGTTCAAGTCAGGAGCTGTG
2961 AAAGTGCTGAATTTCCTTTTTATAGTGCTAAGAGATGACTTTAAAATGTAGAGAAATGCAAGGAAGTGGAGGGATAGATC
3041 CGCAGGAGCCATCTCTTCCTTTTTTTGTCTCTGAATATCTGATTTTGGCTCCTGAATACAGAATTCTTTCCATCCAAACA
3121 GTGTGACATAGTTTTACAGCCTTGTGTATAGATTCCAAAGACCTTTTGCATACAGCATGCCATTTGATCCTTACAATGCC
3201 ATGAGCTGGACTACACAGGTATATCGGTTTTTTGTATGAATCCCAAAGCAATTAAGGAGTTTGCCAAGGTGGCATGGTAA
3281 GTCAATGGAAGGGCCAAAGCAAGCACTTGGGTGCTTGGAACAGTACGCCAGGTGATTTGTATTATCTCTTTTGAGGAATT
3361 TCTTCAGTATACTATTCCTCAAAGGGTAAGCTCTAAACCCCAAATTATCTGTAGAGCAAGTTAATTCCGTTCAGGAGAGG
3441 GTTTCTTTTGTGTGTTTCCATTTTGGCATAGTTAGAGGAGATAATCAGATGGATTTGGCAGCTTTTACCAAAAATGACAG
3521 GCAACTTAAAGTGGATAGCTGTAGGTAATTACTAGAGTTATTTAGACTTAATTCTGTGTCTGAATGAATTCAGTGCTTAC
3601 TGCCAGCCCTTTCATACAAAGACTCCACATTTGAGAGCTGATGTTTTTATCTTTTTTGCAGACTGGATTACAGCTTCGGT
3681 TGGGTTTTCTTGCATATTTACAAATGTATTCCTGTTGCTGTTACTTACGAACAATAACTTGGCTGGCTATCGGATTCTTG
3761 GATCACAGCCTTTTTCCTTGAATTCTCTGGAGACAGGATGTTATTGCTACTTTATGGTTGTCCATATCTGGTGGTGCTGA
3841 CAGGTCTGAGTCCTGATGGATTTTTCTTCCCCTTTTGTAGATGACCTGATTGTTTGCCCTGGATACTTGAATTCTTTGTT
3921 TATCCTTGAAATTTAGTAACTTCGTTGGAGTATATCTCAGGATTGACTGTTGTCTGTTGCCTTTTTCTGGAATGCAGTGA
4001 GCATTAGATATGGTCATTTCAAGCCTCACTGCGTTTTGTATCAGTTTAGTCTGTTCTCTTCTTGAAAACTTCATTTTTAT
4081 ATTGGCTCTCTGTCATCTGTCCTTCACAGTTATCTTTCCTTAGATGGCACTCATCTCATCTTTCTTCATTCATGCTGTAT
4161 GATTTTTTTCTCAAGTCTTATCCTCCATTTCACTGACTGACTCAGTTTTCTGTACTGTTGATTCTAGGGCTTGTTCCTTG
4241 TAATGTGGCTTCCACTTCTGTTACAGTTTTATTTATTTTATTTTATTTTATTTTATTTTTTTCAAGATAGTGTCTCACTC
4321 TGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTCTGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTTCTGCC
4401 TCAGCCTCCTAAGTAGCTGGGACTACAGGCTTATGCCACCATGCCTGGCTAATTTTTGTATTTTAGTAGAGACAGGGTTT
4481 CACCATGTTGCCCAGGCTGGTCTCAAACTCCCGACCTCAAGTGATCCACCAGTCTCAGCCTCCCAAAGTTCTTGGATTAT
4561 AGGTGTGAGCCACCGCGCCCAGCCTAGTTTCATTTTTTATCTCTTTCTTTCCTGAGCTCATTATGTTGTCCTCTTTGATT
4641 GCGTATTTCTTCCAGTGCTGAACAATTTTGTCTACAGTTTTAGTGGTTTATGAGCTCATTCTTTTTCTAGAGTGTATTTA
4721 TCTATCCTTTGCATCTTTCATTCCTTTTCTTGTATTGTTTTGCTTTTATCTTGATGCACAAGTATCATGATGACCCCTTC
4801 TGCTTATTATTTATCTTTGCATGGTACCAGTTTTACCTGTCCAAGAAGAGTGTGGGTAAATCCTCCTTGACTCCTTCTCT
4881 TTTGAGCGAGACATGTTTGAAGGATAACCTTAGCACTTGAACCCTAAGGCTAGCTCTTGATGGGTTGTAGTGGTGGAGGG
4961 TGTTTTTGGTTTTCATTCTGTTTGGATTTGGGGGAATAAGGAGTGACACGAAGCCTCCTTGGAACATGTTGTCTGTGAGT
5041 GCCTTCCATAGACACTGTTGAATCCTCTGCCCTGGGGGTGGCCGGGTCCCATTGGGAGACAGATCCTCTTTGCATTTCCC
5121 CATTCCCACTAGTCGTCATCCTAGCAGGAACATGGTGGGTTTGTACTTCTGCCCTCCTGGATTCCATGTAGCCCACATTT
5201 GTGAGATCGGCTCCAGAGTTGGTTTCTCTCCTCTGGTCCTGCTTCTCGCCGCTCTTCCTCTTTTGGATACCGGAGGGGAT
5281 GAACACACATGGTTCATCTGAGATCTCAACCGCCTGTCCTCGTTTTTCTGGAAACATGCACGCGCAGAGTGTGCCCAGCT
5361 TCTCCCGACTGTTGCCAGTCCTGTTTTGCCAAGTTAACAAATGATCAGTAGAGTCTTGGGAATCTTCTCATTAACTGCCC
5441 AGCAGTTGTGGCTGCTGGAGACTCGGAGAAATGCCTGGCAAATGCAAGAACTCTTCTTCGATTCATCCCCAACTTGGTTG
5521 TATCTGTCAGACATTGCCCTGGAGTCCGTGGTATGGAGTTGTAGCTTTTACTAGTTTCATTATAGACAGCTTGTTGTTCA
5601 ACTTTTGGATGTGTGGGTCAGAGGGCAGGAGCACTTATATAAACATGCATTTATTCTGCCATCTTTTCAGCAGTCCAGAT
5681 GCTTAAACATTGACTTTGAAGCTAATGTCCTTCATAATCTACATTTGAGCAAACAGAAGGAAGCAATATTGCCAGCAAGA
5761 AAGGACGATTAACTTAATCAATACGGGATTTTTGTTTACTGTTCTGTGTGGAAAGATAACTTTTAAGTCAAGTTCCTGTC
5841 TCATTGATTAGAGATATCAGTACCTTCTGGTTTGAAAATAGAGGACATATGACATTTTAATGAACTTAAGTTATCAGCCA
5921 TTGACAATTATTAGTTAGCTGATTAAATATGATAGAATACTCCAAACTAGCACATCACCAGAGTTACCAAGAGACGCCTA
6001 AGCTCTTCTTTATGAACAGGTTGTTGGTGGAGCTGTGCCACTGAGGGGGTTAACATCTCTGACACCTTAACTGTGCCACA
6081 GGTTTTCTTACCTGTCTTTTCAATCAACCCATTTTAAAATTTAGTTCATCAAGAAAGAGAAAGGTGTTAAGTCTTCATCA
6161 GGATTCCTTTTGGTTTCTCATGAATACATATTCACATGGTTTGGAGACCTGGAGCCCACCACCAAAGCACACTGAGTTAA
6241 TGTTTTGAAAGTGCATTTGTAGGTAGATCCTGGGGCTGGGGTTTTATTTGGCCTGTTTGTAGAATTGAAGCCTCTTTGCC
6321 TCAGTGGTCAGCACATCCCACCAGACATCCGGCAGCAAGCTTTCGTCACCTTCAGAGCTCTAGCATAATGATAAAGGAGC
6401 ACTAGTGACAGCCTTGCTGTATGCACCAAGCTCCACCCTGGGCAGTGCCTTTCCCTAATGTCTGTCCTGGTGTGAAATGG
6481 AGACTTGAAGACCGGTACCCACATGTAAGAGAGGTTAACGAAGGGAGGGTGGCAGAGAGAGGAGTCATGTGAAGGAAAGC
6561 TACCTTTAGTCCTCCATCGCAATACTGTCCAGTGTCTCCAGCGTGCTAGAAACTGTGCTGAATGCTGGGCACATGGCAGG
6641 GGTCAAAGCAGACAGAAATCCCTGCCTCATGAACCCACTTTCTATTAGGGGAGACAGACTAGAAACACAAAAAGGACATT
6721 GAATAGTACGATTGAGAGATGAGTGCTATGGAGAAAAATCCAGCCAGAAAGGGAGATGCAGAAGATAGCACCAGATCTTC
6801 TCAATGTTGTTTTCATCATGGACAGGTGCGTTCCTTAGAAGATGAAGTGTTAGTGATTCCTGAGTTTTTCTCACCTTCAC
6881 GTCGATTGATCTGAATTTGGAGAGTCTGTTTTCTGTGTCTGGCTCTGCACTCAACTTTGTAGGGGACCCTGTCGAGGTCC
6961 CCACACTGTGGCTTCAGGTAGACAGAGCAGATGGGAGCCCATTTCAGTTCATTGTCTTGCTGACCAATGGGGAACTGTGG
7041 TCAGGTGAGAGGAGGCAGCTTTTACAATCAGACTTCATTGAATAGTGTGGGCTGCTGTTTCCTTGTAACAAAACCCCATA
7121 ATGATGGCAGTTTCCGGATGTGTCTTTTTAGGACTTCAGAACTTATTATTTGAATAGAAGTTTAAAGCATCTGGATGATG
7201 ATGCTGTAGCTAAAACAGCTGCTTGTCAGAAGAGACCCTATTTAACACTTCTAAACTTGTTTCAGAGGTGGAGGAAAGGA
7281 TAATCTGGGAAGGCCTCCCTCTCAAGTCCACAGGTTGGTATCAGCTGTGTTCATCCCCCAAAAGGAAAATAAAATGACAA
7361 CAATATTTTGGTCACAGAATTCCTGAGAAACCTCTGTTTCTATCTTCATGTCTTTAAGATAGGGACATGAATTCCCCATG
7441 ATCTGGGTGATAGGGTTAGGGTGGCCAGGACACTGTTACTTTGTGTGTGACACAGGTGGCTCCTCATGACAGTTCCTCCA
7521 TGCCTTAGAACATGTTGTCTGTCTGGTCATCCCTGGGGGTAGAGCTGAGTGACCCAGCAGTGGGAGATTTAACAACTGGA
7601 GAAGAAGATGGGATGTGTTTAATTATCCCCAGAGGTAGGGCCAATTTGTCACCCTTTAAATAGACTTATTTGCATATAAA
7681 CTAAAGCACCTTAGGGCATCATTACCGAAAGTGTCTAAGCAAATGTCTGATATAGTTACGTGCCTGCATTAAAAGAAAGC
7761 AGCCCCCTTATCTTGCCTTAATATCCTTACAGTGTTTTAATAAGTTCATAATGCATCCTGTATGTGCATTTTTTGGTATA
7841 AAACACCGAAAGGTGGAGAATTGACTTCAGTTCTCTCCATCCTTTCCCCTTAAGTGTTGGTGGCGCTGCAGGGGCAACGT
7921 GCCTCCCATTGGAAGTGGTGACTTCCTCTTTGATAGAGGTTTGCCTGTCTCTTGAAAATGAAAAGAAGCGGAGATTGATC
8001 TCTGGAGTCCCATGGTCCAGTTTGGACTATTGGGAATATTTTTTATGGGATGTTAAAAACAATATTAGAGACGTGAGATA
8081 GTAAATTTGTGGTAATACCGGATCCAGGAAGCTTACAGTGAAGAGTATGAACTTAACCTGAAAAGTATTTCTCTGTTCTA
8161 TAAATCTCTCAGTGACATTTGGATTAATCAAGCATAATTAAATGTAGTTAGATTTTTGTCAGATTGTAGTTCAAAATAAT
8241 ATTCATCTATGGAGAGGGTAATATATTATGTAGAAATTTTATTAAGCACTTTAGTTAAGCAAACACTAAGGAGAACAAAA
8321 TCAACCTCAGGAAGGTTAATTACTAAAAAAATCACAAAGTATAGTAGATTATGTAAATCATTTTAATTTTGAATACCATG
8401 GCTTGAGCTTTAATTTACATAGAGACGTATTTTGGATTTGTTTTTCACATTATATTTTCTAGTACAGGATTGCAATTGCA
8481 TTCTTGAAAAGTTCTACTCATTTTAGGATTCCATTAAGTTTGCTTAACTTTTTTCATGTTATAATTTCCAAAAGCAAAGA
8561 ATTACAATTGTATTCTAGCTAATTATTTTAATGTTTCACTAACTTTGTGTGTATTGTAAGACCATATTTTTATTTCTATA
8641 CAAATGATGATTTTAAGAGAAGTATCAGGAGAGAGAATGTATATGAAAGCATCGCGTCCACGCCTGGCTTTGCAATAAGT
8721 GTTCATTTAAAAGAAAGACATTTACAAAGGTAAAACATAAGAGTTTAGACTATAGCGATAAATCTTTTTATTTTAGTAAT
8801 TTCTTTAAAGGGAAAAGTAAAGAGATCAAAATGATTTTATATGTATTTTTTTTGTACTCAGAGAATTACATTTTCACTAC
8881 CCCCGCCTGTCTCAGGGAATAGCCTTTGATAAGAATCCCATGGAGATCTCTGGAACTCTATTACAGTGTGTTCAGATTTG
8961 TTAGTTCATATGTAAATTTCAGAGCTAGAGCTTCAAAACTAGAGTATTGTAATCTCAGGAACATAAGATTATCCAAGAAG
9041 CCTGAACCTTGCTCTTTTCATGATAAATGACATCCAAATTTCCTTTGTCTAGGAGATAAGCATAGATCCCTTTTATCATG
9121 CTTCTCTGAGATTTTCACAGAACAACCCTGCAATTTGATTTTGTTTGATAATTTTGCTTTTTGGCTTTTCAGTGAGGACT
9201 CTATTTTCCATTGGAACTGACTCCTTTGGGGATAATAAGCTTTCACTTAAAAGAACATTCCATTAGATAGTTCTAACTTC
9281 AATGAACCTAAAAGTGGCTTCTTAATTTGAATAATCTGGATAACTTTTGCAAATGGGTCAAAACAGCACAAGTATCAACA
9361 ATCACGTATGTACTGAGTAATATTTGCCCTCCAGTTAGCAAAGTCAAGAAATGTCTAACTCTGGCACACAGCACTGGTTT
9441 TAACTACTCTTTAGTTCATCTTTGCCTTCCAAATTGGTTGAAAATGGCAAGCTTAGAATGGAATGCATATTAATAACAGA
9521 ACCACTTAATGTTTTAAAATATTCATACCTTGAGATTCTTTTTGAGAGAAAAAAGAAATCTTAACATCCAATTCTAGTTG
9601 TTTTGGCTTTTCACATATGCTAGACATGAAAAAGGCAGTTACAAAAGTGAAATCCGATTGGAAGTCAGTGGTGTCCGCCA
9681 TTGAGCCGTGCTAAATGTCGTGTCACAAAAGGAGTTTGTGAAAACAGGATGAGTAGAAAATGTTATACTGTTGTTTCTAT
9761 CGTGGCACCGCTTTCTTATAAATTCCATTTGCTTTTTGTCATCTGAACTGTTACAACCATGGGAAACCTCAGTCCATATT
9841 TTTAAAAGCACTATATACTTACAGGAAAAACCGACTTATGCCTTCATTGAAAAAATGTTGAAGTTAATATCCCAAATGTT
9921 TAATGAGCATGTTTTAGAATATTTACAGCTAAAGTCTGTCACTTTAGGGATTTGACAAAACTTGAGACTGCCTGCCACCG
10001 AAGAGGGACCAGGCAGAATCTTCTCAGCCTTGTAACCAGCGTTAAAAAAATATAAGGGGCTTGATGAGATCCTAGATCTG
10081 CTCCTTTTCTCCTAGGTGCCTGGGTAACTCCTGGGGAAAGCATCATATTAAGTCCTTTTCAAGCAAGGTGTGTGATTTTG
10161 ACCAATGAATTGAGCTGATATGTGATTTTGACCAATGAATTGTGCATCTATTTAAAAATTACCAAGTGTATCTTGACTCT
10241 TGAGTGGACAGTCAAGGCAAAGTTTACTTAGGAAATGTAAAGTATGGAGTGTTTTAAAAAATTCAAATTGAGTTTATTCA
10321 CTGTTGGAGGAATTGAATTCTATTGCCTCCCTCATTTCCATTATGTTCATTGTTACAATTGTGCTGCTCTGTTCTCATTG
10401 TGATGCTTAGTTCTCGTGTAGAACTGAGTGCTACATTGTGATTAGAAACTGGAGTTGTGCTTGAGTCAGTCCTGGAAAAC
10481 AGGACCCATTTTTAAGAAGAACGGAACATACCACTTTGGCATTCTGGCTGACCCTAATTTCTGCAGAGTTCCTTGGTGTT
10561 AAAATCATTTGAGGTCATAGTTGCTGCTTATGGTTTATATACACACCATCTGCTGCTCTAAGTTCACATCCTCTCAAAAG
10641 CATGCAAGTGCTTGAAATTTAAATATTTCCCAGATCTAAAACAACTTGTGACTACCTAAGAAATGCTTGAACCAAATAAG
10721 AAACAGCACTGTGGAATAAAATATACCATTGTGAACATATCTGATGCTGCAATGAAATGTAAAGTTCCTTACTTTGCTGA
10801 TTTTTCATCATAACTCCTTGACTCATAAAAGCGGTGTCTAAACTGGGAACAGCTGCTAATAGGGTAAAAGTATTATACAT
10881 CAAATAAAAGTTCATTACAATATTTGTACTCATAAGTCAAAATCTGACCTGGTTCGCTTTGTGCCTCTGTCAGCCTACTT
10961 ACAGTGATAAATGTACACACAAGTCCAGTGTTGCCAAGGAGCTTTGTTTATAGAAAGAAGCTTGGTCCCCTCAGTTCTAT
11041 GCTGTTGTGTGGCCTGGTTGGTACATGCCGTCATGATGAAGGATGACTTTGGTTTGAGATAATTTGTCACTCCACATTCC
11121 ATGGAGAAAAGTGTTTCATTTTGATGTTGGAAAAACATGACCAGAGAAGCATGTGACTCAGATAATGTTCCCCGGAAGTT
11201 GCAGAGCAATCTGTGGTGTCTGTCATAGCCCAACTAGTCCTGGAGCACATGGACAATTCTGTACCCCAATAATCAGAACA
11281 ATAAAATGGTAGTTGTGATTCAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' guCCGUGCCCUCGAGUCCACu 5'
            || || | :| ||||||| 
Target 5' ggGGAACTGTGG-TCAGGTGa 3'
 7029 - 7048 154.00 -17.90
2 
miRNA  3' guccgUGCCCUC-G-AGUCCACu 5'
               ::|| || | ||||||| 
Target 5' tgaaaGTGGAAGACATCAGGTGg 3'
 434 - 456 148.00 -17.10
3 
miRNA  3' guccGUGCCCUCG-AGUCCAcu 5'
              ||| | :|| ||||||  
Target 5' cccaCACTGTGGCTTCAGGTag 3'
 6960 - 6981 137.00 -14.00
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1310233420 2 dbSNP
rs1022693307 7 dbSNP
rs1370582086 9 dbSNP
rs969731207 11 dbSNP
rs375230657 18 dbSNP
rs746373355 36 dbSNP
rs1417407708 48 dbSNP
rs1416178208 52 dbSNP
rs1182681149 66 dbSNP
rs1482790658 73 dbSNP
rs1241082434 78 dbSNP
rs1479144946 84 dbSNP
rs981066261 90 dbSNP
rs1465337959 91 dbSNP
rs1267445653 93 dbSNP
rs1236174742 96 dbSNP
rs188298454 125 dbSNP
rs1312929218 126 dbSNP
rs1227435619 143 dbSNP
rs1378863632 147 dbSNP
rs1335210193 171 dbSNP
rs1036026483 174 dbSNP
rs892033251 176 dbSNP
rs754333486 192 dbSNP
rs1320510588 209 dbSNP
rs757711737 224 dbSNP
rs1351733588 228 dbSNP
rs753712461 244 dbSNP
rs989134921 245 dbSNP
rs1383144587 253 dbSNP
rs914437545 260 dbSNP
rs1471478427 272 dbSNP
rs1010448096 276 dbSNP
rs180817239 281 dbSNP
rs761614587 282 dbSNP
rs968506132 285 dbSNP
rs750875929 286 dbSNP
rs375907510 289 dbSNP
rs1356748321 299 dbSNP
rs1460807246 311 dbSNP
rs980221314 327 dbSNP
rs1366404015 337 dbSNP
rs758689858 339 dbSNP
rs780463205 340 dbSNP
rs564262959 341 dbSNP
rs1369810068 342 dbSNP
rs959947128 348 dbSNP
rs911265224 358 dbSNP
rs944048401 368 dbSNP
rs1363875544 373 dbSNP
rs992496057 388 dbSNP
rs764967195 394 dbSNP
rs1278567763 397 dbSNP
rs907823356 412 dbSNP
rs1190900952 430 dbSNP
rs1434906611 434 dbSNP
rs1267985539 436 dbSNP
rs1190054206 463 dbSNP
rs1489656063 470 dbSNP
rs1041084373 486 dbSNP
rs1205482938 490 dbSNP
rs973216985 491 dbSNP
rs1403666754 492 dbSNP
rs920387446 499 dbSNP
rs897144304 500 dbSNP
rs186534156 508 dbSNP
rs1404371637 511 dbSNP
rs768730794 514 dbSNP
rs1310061364 515 dbSNP
rs1410713738 517 dbSNP
rs1050242753 518 dbSNP
rs781160171 520 dbSNP
rs191423456 533 dbSNP
rs1222655182 545 dbSNP
rs1251350186 552 dbSNP
rs944059644 553 dbSNP
rs1479157534 571 dbSNP
rs1482161149 580 dbSNP
rs1041063712 582 dbSNP
rs750370110 584 dbSNP
rs181117650 585 dbSNP
rs1194374719 591 dbSNP
rs758277209 600 dbSNP
rs1347621974 605 dbSNP
rs888630256 606 dbSNP
rs1012398918 611 dbSNP
rs1223496544 616 dbSNP
rs1321462424 628 dbSNP
rs772973884 634 dbSNP
rs1229233306 642 dbSNP
rs779676156 644 dbSNP
rs1335325816 648 dbSNP
rs187023859 657 dbSNP
rs1397508480 662 dbSNP
rs1044172930 682 dbSNP
rs1335961854 693 dbSNP
rs1468225494 715 dbSNP
rs905578556 730 dbSNP
rs1003028872 731 dbSNP
rs1413512411 733 dbSNP
rs1159180615 741 dbSNP
rs1035403544 745 dbSNP
rs1405433315 747 dbSNP
rs1361668762 769 dbSNP
rs1189222848 773 dbSNP
rs368845630 776 dbSNP
rs955882751 782 dbSNP
rs1010165116 787 dbSNP
rs1021935877 789 dbSNP
rs1203582958 805 dbSNP
rs1460418306 807 dbSNP
rs1270594049 812 dbSNP
rs1209392514 828 dbSNP
rs1350071958 830 dbSNP
rs1327521904 834 dbSNP
rs968524577 835 dbSNP
rs1368327683 850 dbSNP
rs1277981945 855 dbSNP
rs7062408 858 dbSNP
rs1340836092 863 dbSNP
rs911046492 864 dbSNP
rs1010459305 885 dbSNP
rs1043250648 888 dbSNP
rs1207608 891 dbSNP
rs754701055 894 dbSNP
rs904666785 896 dbSNP
rs1001306437 903 dbSNP
rs1369401321 944 dbSNP
rs1207609 981 dbSNP
rs766988583 984 dbSNP
rs1228971178 985 dbSNP
rs1273939764 1000 dbSNP
rs771426170 1009 dbSNP
rs779361539 1010 dbSNP
rs1446465955 1035 dbSNP
rs1282328895 1038 dbSNP
rs948211042 1039 dbSNP
rs1357249026 1052 dbSNP
rs1207517060 1063 dbSNP
rs1252325160 1071 dbSNP
rs746434016 1075 dbSNP
rs1298215807 1076 dbSNP
rs1429985567 1082 dbSNP
rs1324171934 1083 dbSNP
rs774877308 1096 dbSNP
rs149920102 1097 dbSNP
rs183500165 1105 dbSNP
rs563743221 1106 dbSNP
rs1239131444 1108 dbSNP
rs1161304843 1161 dbSNP
rs772450813 1171 dbSNP
rs775676623 1175 dbSNP
rs1010275612 1178 dbSNP
rs766871412 1180 dbSNP
rs1187605089 1186 dbSNP
rs751764730 1192 dbSNP
rs760646849 1198 dbSNP
rs968638775 1199 dbSNP
rs1201006159 1206 dbSNP
rs755156917 1211 dbSNP
rs1006758575 1223 dbSNP
rs1018086138 1225 dbSNP
rs920448199 1234 dbSNP
rs953359319 1240 dbSNP
rs1275172198 1249 dbSNP
rs1395801556 1251 dbSNP
rs1213911004 1255 dbSNP
rs985969152 1263 dbSNP
rs1337306573 1268 dbSNP
rs1276553694 1283 dbSNP
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rs199895709 1680 dbSNP
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rs1443811227 1689 dbSNP
rs1241143132 1696 dbSNP
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rs1259705441 1707 dbSNP
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rs1320448607 1725 dbSNP
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rs369307335 1726 dbSNP
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rs770676207 1726 dbSNP
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rs1363188932 1740 dbSNP
rs12848421 1741 dbSNP
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rs1303950476 1752 dbSNP
rs1404639521 1753 dbSNP
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rs1268175695 1764 dbSNP
rs1309561365 1764 dbSNP
rs1164808755 1765 dbSNP
rs1330763889 1766 dbSNP
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rs1276438347 1777 dbSNP
rs1345425034 1785 dbSNP
rs1042742287 1786 dbSNP
rs1434376542 1790 dbSNP
rs1429432334 1794 dbSNP
rs774024110 1801 dbSNP
rs904177904 1803 dbSNP
rs1489685583 1811 dbSNP
rs1006791047 1813 dbSNP
rs1208087923 1816 dbSNP
rs745469250 1824 dbSNP
rs1197882745 1832 dbSNP
rs901024696 1833 dbSNP
rs1208821136 1844 dbSNP
rs1266001340 1851 dbSNP
rs771682494 1854 dbSNP
rs775060957 1857 dbSNP
rs951581233 1863 dbSNP
rs1209392 1871 dbSNP
rs1331169660 1872 dbSNP
rs904754117 1877 dbSNP
rs1016972625 1883 dbSNP
rs1379781906 1887 dbSNP
rs1296351666 1890 dbSNP
rs1480960805 1891 dbSNP
rs1406746886 1896 dbSNP
rs1174995836 1898 dbSNP
rs969367272 1903 dbSNP
rs1387097576 1907 dbSNP
rs1413651060 1912 dbSNP
rs1182140688 1920 dbSNP
rs1420015588 1931 dbSNP
rs754469275 1936 dbSNP
rs1250333913 1937 dbSNP
rs780713555 1939 dbSNP
rs1463003911 1947 dbSNP
rs981035379 1962 dbSNP
rs1264310468 1964 dbSNP
rs1459239398 1967 dbSNP
rs1002137008 1981 dbSNP
rs1207610 1991 dbSNP
rs1390067425 2000 dbSNP
rs1334947007 2004 dbSNP
rs1385358150 2008 dbSNP
rs1454379068 2022 dbSNP
rs1383382173 2023 dbSNP
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rs187827769 2030 dbSNP
rs190007023 2032 dbSNP
rs1055957863 2034 dbSNP
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rs1211327930 2067 dbSNP
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rs1205801951 2091 dbSNP
rs1350138875 2095 dbSNP
rs755211241 2103 dbSNP
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rs1215786941 6097 dbSNP
rs1315661522 6101 dbSNP
rs1409195933 6102 dbSNP
rs1402972187 6104 dbSNP
rs1286372101 6110 dbSNP
rs1378664883 6120 dbSNP
rs1318585853 6144 dbSNP
rs1291704254 6156 dbSNP
rs962004468 6160 dbSNP
rs966458535 6164 dbSNP
rs973653497 6168 dbSNP
rs34945464 6177 dbSNP
rs1224219070 6178 dbSNP
rs1032025968 6192 dbSNP
rs1164818371 6197 dbSNP
rs1404286134 6206 dbSNP
rs1415184271 6209 dbSNP
rs957967028 6210 dbSNP
rs1479003872 6213 dbSNP
rs1264262985 6223 dbSNP
rs766395136 6232 dbSNP
rs1294472878 6233 dbSNP
rs920822600 6234 dbSNP
rs1248995768 6236 dbSNP
rs990486525 6237 dbSNP
rs774379167 6254 dbSNP
rs1271491103 6279 dbSNP
rs1182178447 6281 dbSNP
rs1249045909 6287 dbSNP
rs1318895898 6292 dbSNP
rs916518840 6334 dbSNP
rs755521683 6343 dbSNP
rs370603921 6345 dbSNP
rs781651111 6347 dbSNP
rs1369602842 6348 dbSNP
rs147264118 6351 dbSNP
rs1046116094 6352 dbSNP
rs1182656095 6357 dbSNP
rs752600190 6365 dbSNP
rs934976090 6366 dbSNP
rs777764548 6370 dbSNP
rs981912478 6379 dbSNP
rs1422499107 6381 dbSNP
rs1053645278 6384 dbSNP
rs1427145426 6388 dbSNP
rs749529432 6393 dbSNP
rs1427837652 6413 dbSNP
rs771180180 6417 dbSNP
rs1468085414 6444 dbSNP
rs1423028478 6445 dbSNP
rs1200629246 6448 dbSNP
rs1458355551 6450 dbSNP
rs1251010150 6475 dbSNP
rs893753572 6494 dbSNP
rs183706656 6495 dbSNP
rs929403225 6499 dbSNP
rs1048250547 6505 dbSNP
rs763848914 6513 dbSNP
rs1368715057 6520 dbSNP
rs890287787 6521 dbSNP
rs745651965 6559 dbSNP
rs572258419 6580 dbSNP
rs1375473028 6582 dbSNP
rs753266165 6583 dbSNP
rs756709790 6587 dbSNP
rs1399048676 6593 dbSNP
rs1296139363 6594 dbSNP
rs1460772362 6599 dbSNP
rs1311441231 6603 dbSNP
rs139699288 6604 dbSNP
rs751995368 6609 dbSNP
rs1393842458 6614 dbSNP
rs900759670 6619 dbSNP
rs1440451957 6634 dbSNP
rs994808817 6636 dbSNP
rs1027641990 6641 dbSNP
rs1194364135 6643 dbSNP
rs1484363734 6644 dbSNP
rs771941204 6647 dbSNP
rs1256310018 6653 dbSNP
rs1315308289 6657 dbSNP
rs1345593834 6665 dbSNP
rs1338930019 6667 dbSNP
rs959235455 6669 dbSNP
rs902660502 6675 dbSNP
rs1334715396 6685 dbSNP
rs1304404063 6687 dbSNP
rs1340941556 6688 dbSNP
rs991751237 6689 dbSNP
rs917416411 6692 dbSNP
rs1313829855 6695 dbSNP
rs1249933354 6724 dbSNP
rs1481928158 6730 dbSNP
rs1196863509 6731 dbSNP
rs1374156525 6735 dbSNP
rs971552531 6777 dbSNP
rs1380919338 6792 dbSNP
rs1442849648 6795 dbSNP
rs1363233743 6796 dbSNP
rs957803616 6801 dbSNP
rs1185422061 6802 dbSNP
rs1425728986 6803 dbSNP
rs1012363522 6805 dbSNP
rs1186920869 6807 dbSNP
rs1484593981 6819 dbSNP
rs1212068 6820 dbSNP
rs760618175 6830 dbSNP
rs1349872617 6838 dbSNP
rs1168097047 6858 dbSNP
rs1356030902 6860 dbSNP
rs923665288 6861 dbSNP
rs1321918596 6878 dbSNP
rs1302183298 6879 dbSNP
rs1403352613 6881 dbSNP
rs1292352819 6882 dbSNP
rs935069927 6884 dbSNP
rs1454125846 6885 dbSNP
rs1315075164 6906 dbSNP
rs1300440543 6940 dbSNP
rs1053410067 6944 dbSNP
rs970625596 6954 dbSNP
rs781396785 6955 dbSNP
rs1212401892 6958 dbSNP
rs1384898020 6959 dbSNP
rs748611588 6963 dbSNP
rs1293936326 6965 dbSNP
rs914906477 6977 dbSNP
rs1459545509 6979 dbSNP
rs981964723 6982 dbSNP
rs1164553441 6983 dbSNP
rs1351255137 6986 dbSNP
rs1309618385 6999 dbSNP
rs1228876253 7000 dbSNP
rs769872547 7013 dbSNP
rs1446317816 7021 dbSNP
rs931926252 7025 dbSNP
rs1050327293 7028 dbSNP
rs1356508790 7032 dbSNP
rs890288622 7041 dbSNP
rs768290822 7056 dbSNP
rs1231008729 7067 dbSNP
rs186174153 7077 dbSNP
rs1464646565 7092 dbSNP
rs1280434539 7101 dbSNP
rs909329470 7107 dbSNP
rs1326322492 7118 dbSNP
rs368285675 7136 dbSNP
rs1388579740 7137 dbSNP
rs1395397114 7139 dbSNP
rs994903482 7144 dbSNP
rs1027694220 7160 dbSNP
rs958723885 7165 dbSNP
rs1039455888 7169 dbSNP
rs1168252130 7173 dbSNP
rs1013591113 7184 dbSNP
rs1371253467 7188 dbSNP
rs1225409046 7190 dbSNP
rs776195725 7201 dbSNP
rs1024538546 7202 dbSNP
rs1452117818 7204 dbSNP
rs971988045 7211 dbSNP
rs1211307482 7249 dbSNP
rs1458785617 7252 dbSNP
rs190701548 7272 dbSNP
rs1196720461 7288 dbSNP
rs977589606 7294 dbSNP
rs771091034 7299 dbSNP
rs1339198690 7309 dbSNP
rs1268930489 7311 dbSNP
rs1235983092 7313 dbSNP
rs774589613 7315 dbSNP
rs924765148 7338 dbSNP
rs1438856297 7344 dbSNP
rs933580564 7348 dbSNP
rs1329862817 7352 dbSNP
rs1409150996 7360 dbSNP
rs1428896121 7367 dbSNP
rs1393984955 7369 dbSNP
rs183408932 7385 dbSNP
rs1174124614 7387 dbSNP
rs761443660 7390 dbSNP
rs1175010738 7392 dbSNP
rs1191169718 7393 dbSNP
rs1441051127 7394 dbSNP
rs1233082005 7403 dbSNP
rs7887213 7404 dbSNP
rs7886113 7408 dbSNP
rs34393461 7411 dbSNP
rs956494843 7448 dbSNP
rs1435720514 7451 dbSNP
rs1271249636 7474 dbSNP
rs1202569036 7475 dbSNP
rs1470890812 7477 dbSNP
rs1336861750 7490 dbSNP
rs1387242045 7494 dbSNP
rs1428283858 7495 dbSNP
rs989183201 7500 dbSNP
rs1280218981 7508 dbSNP
rs902754958 7512 dbSNP
rs914898693 7521 dbSNP
rs764915226 7528 dbSNP
rs1335896997 7529 dbSNP
rs1362135315 7548 dbSNP
rs1435144518 7549 dbSNP
rs1374746889 7554 dbSNP
rs931627875 7554 dbSNP
rs1050789092 7555 dbSNP
rs7886281 7564 dbSNP
rs1053955178 7588 dbSNP
rs1282986920 7600 dbSNP
rs911783991 7611 dbSNP
rs1322074011 7616 dbSNP
rs757371394 7619 dbSNP
rs1468239190 7620 dbSNP
rs7887522 7625 dbSNP
rs1238872224 7626 dbSNP
rs1190489789 7649 dbSNP
rs1486237698 7654 dbSNP
rs1257428694 7655 dbSNP
rs775120512 7656 dbSNP
rs1263887850 7659 dbSNP
rs1223325498 7662 dbSNP
rs1284992361 7662 dbSNP
rs1348765645 7673 dbSNP
rs1286221237 7675 dbSNP
rs1415151062 7678 dbSNP
rs1354651396 7684 dbSNP
rs1011964909 7689 dbSNP
rs760568293 7690 dbSNP
rs1023269350 7692 dbSNP
rs1345736026 7696 dbSNP
rs1157682269 7707 dbSNP
rs763817470 7708 dbSNP
rs1244065908 7709 dbSNP
rs897657553 7725 dbSNP
rs186982573 7726 dbSNP
rs1415494912 7731 dbSNP
rs575819136 7733 dbSNP
rs7887681 7734 dbSNP
rs761460626 7737 dbSNP
rs1486285504 7740 dbSNP
rs1049138447 7751 dbSNP
rs1190436121 7754 dbSNP
rs1186286374 7758 dbSNP
rs35135943 7763 dbSNP
rs1487115755 7767 dbSNP
rs894487930 7770 dbSNP
rs1025552780 7778 dbSNP
rs1445405854 7784 dbSNP
rs1275274950 7786 dbSNP
rs1234055747 7787 dbSNP
rs1334457969 7793 dbSNP
rs1481403086 7808 dbSNP
rs1177049794 7815 dbSNP
rs1220269532 7820 dbSNP
rs1410670714 7826 dbSNP
rs1362532964 7828 dbSNP
rs951329099 7828 dbSNP
rs984365843 7829 dbSNP
rs7887802 7838 dbSNP
rs1351049723 7839 dbSNP
rs1398457396 7845 dbSNP
rs1160577512 7847 dbSNP
rs1415259241 7848 dbSNP
rs1207611 7849 dbSNP
rs1024716308 7854 dbSNP
rs1430717227 7857 dbSNP
rs1016736637 7864 dbSNP
rs1186509803 7870 dbSNP
rs749993532 7871 dbSNP
rs752977920 7873 dbSNP
rs755472054 7873 dbSNP
rs1468170891 7878 dbSNP
rs1302969200 7882 dbSNP
rs1271548734 7883 dbSNP
rs11796726 7887 dbSNP
rs148584214 7888 dbSNP
rs7887161 7900 dbSNP
rs957502023 7905 dbSNP
rs1284482658 7906 dbSNP
rs7886890 7919 dbSNP
rs1391809311 7931 dbSNP
rs989191671 7934 dbSNP
rs1333016887 7950 dbSNP
rs1463845976 7952 dbSNP
rs1355407883 7954 dbSNP
rs1022021866 7968 dbSNP
rs1286375624 7982 dbSNP
rs987460336 7984 dbSNP
rs1194302104 7985 dbSNP
rs953174920 7990 dbSNP
rs985842146 7991 dbSNP
rs1221994783 8013 dbSNP
rs1250503479 8015 dbSNP
rs911526997 8024 dbSNP
rs759917781 8034 dbSNP
rs1349931816 8035 dbSNP
rs749466444 8051 dbSNP
rs1232913704 8073 dbSNP
rs919098543 8074 dbSNP
rs771340027 8078 dbSNP
rs1054370919 8082 dbSNP
rs893944243 8093 dbSNP
rs947812380 8100 dbSNP
rs930441555 8101 dbSNP
rs1460822977 8107 dbSNP
rs906277774 8113 dbSNP
rs779134293 8118 dbSNP
rs1049188539 8143 dbSNP
rs1003203497 8147 dbSNP
rs1434649817 8153 dbSNP
rs1468492424 8157 dbSNP
rs1393285685 8159 dbSNP
rs894590489 8169 dbSNP
rs1419857211 8174 dbSNP
rs948797918 8177 dbSNP
rs1408036139 8221 dbSNP
rs1404448714 8238 dbSNP
rs1161269452 8244 dbSNP
rs1364173694 8250 dbSNP
rs1258129932 8259 dbSNP
rs887035135 8262 dbSNP
rs1345653881 8264 dbSNP
rs1261917682 8265 dbSNP
rs1239175024 8270 dbSNP
rs1315928841 8271 dbSNP
rs1045772368 8273 dbSNP
rs561844032 8276 dbSNP
rs1005441104 8277 dbSNP
rs1426956188 8284 dbSNP
rs1304073908 8288 dbSNP
rs745989275 8290 dbSNP
rs1408373029 8291 dbSNP
rs1354494178 8294 dbSNP
rs1357686348 8295 dbSNP
rs144440326 8300 dbSNP
rs1441578332 8301 dbSNP
rs1017199215 8310 dbSNP
rs775449628 8345 dbSNP
rs1454421482 8351 dbSNP
rs1313192842 8357 dbSNP
rs1361786342 8360 dbSNP
rs1476310696 8372 dbSNP
rs146600336 8375 dbSNP
rs1271972606 8392 dbSNP
rs1031845174 8393 dbSNP
rs1436051630 8397 dbSNP
rs975231628 8400 dbSNP
rs1263816629 8401 dbSNP
rs1205180108 8419 dbSNP
rs1485291791 8420 dbSNP
rs768432197 8421 dbSNP
rs367710517 8427 dbSNP
rs893323297 8428 dbSNP
rs1011670316 8450 dbSNP
rs954772694 8462 dbSNP
rs987471496 8476 dbSNP
rs1339209215 8480 dbSNP
rs776302855 8484 dbSNP
rs1181143716 8495 dbSNP
rs761440035 8501 dbSNP
rs953177574 8511 dbSNP
rs923931308 8518 dbSNP
rs1384255882 8524 dbSNP
rs986280126 8533 dbSNP
rs1386724302 8556 dbSNP
rs1444818394 8560 dbSNP
rs1463163595 8561 dbSNP
rs1395530618 8562 dbSNP
rs1018643705 8564 dbSNP
rs935594823 8565 dbSNP
rs965666206 8567 dbSNP
rs1164649031 8568 dbSNP
rs971995123 8580 dbSNP
rs1374711088 8582 dbSNP
rs1396193248 8587 dbSNP
rs989722803 8606 dbSNP
rs915458492 8610 dbSNP
rs948274254 8611 dbSNP
rs1215058536 8616 dbSNP
rs1468619807 8617 dbSNP
rs1272211066 8665 dbSNP
rs1331450977 8669 dbSNP
rs1213448123 8676 dbSNP
rs1355552338 8683 dbSNP
rs753207703 8694 dbSNP
rs1228715090 8695 dbSNP
rs141335498 8696 dbSNP
rs777781480 8697 dbSNP
rs750942839 8702 dbSNP
rs915728408 8702 dbSNP
rs1246948895 8703 dbSNP
rs1371970886 8716 dbSNP
rs749903675 8717 dbSNP
rs1403386924 8730 dbSNP
rs948867207 8758 dbSNP
rs1398291891 8759 dbSNP
rs1045209385 8761 dbSNP
rs762495743 8765 dbSNP
rs192292667 8777 dbSNP
rs753923718 8778 dbSNP
rs1194939834 8785 dbSNP
rs1454382173 8788 dbSNP
rs1273637221 8825 dbSNP
rs1046731353 8828 dbSNP
rs1191295241 8832 dbSNP
rs1460773765 8840 dbSNP
rs1275490376 8842 dbSNP
rs1196773704 8846 dbSNP
rs182904729 8846 dbSNP
rs1201258196 8847 dbSNP
rs934638358 8849 dbSNP
rs1046681969 8871 dbSNP
rs1339265558 8877 dbSNP
rs866891702 8880 dbSNP
rs1461526161 8881 dbSNP
rs1053312978 8885 dbSNP
rs1273166093 8886 dbSNP
rs756580609 8890 dbSNP
rs1236567957 8904 dbSNP
rs764510091 8908 dbSNP
rs1005613051 8941 dbSNP
rs1434521451 8943 dbSNP
rs1337787277 8946 dbSNP
rs1372932234 8949 dbSNP
rs1329265244 8950 dbSNP
rs187224478 8954 dbSNP
rs4898273 8964 dbSNP
rs1038320279 8969 dbSNP
rs1175515917 8971 dbSNP
rs1049962482 8972 dbSNP
rs1169950729 8973 dbSNP
rs1424998639 8990 dbSNP
rs889942342 8992 dbSNP
rs1393900987 9000 dbSNP
rs1007315150 9008 dbSNP
rs1470934253 9014 dbSNP
rs1019068922 9019 dbSNP
rs779330771 9029 dbSNP
rs1233138762 9049 dbSNP
rs965716714 9061 dbSNP
rs779216883 9064 dbSNP
rs1025968851 9071 dbSNP
rs746116667 9077 dbSNP
rs1250243154 9090 dbSNP
rs193265913 9110 dbSNP
rs1213560692 9121 dbSNP
rs1453727703 9137 dbSNP
rs1279652378 9141 dbSNP
rs1217586422 9143 dbSNP
rs2464543 9144 dbSNP
rs985106678 9146 dbSNP
rs915754334 9148 dbSNP
rs1314509292 9150 dbSNP
rs1415266475 9151 dbSNP
rs1374801884 9152 dbSNP
rs1401985074 9153 dbSNP
rs1408247274 9164 dbSNP
rs1432658796 9166 dbSNP
rs1157701817 9167 dbSNP
rs1471408281 9181 dbSNP
rs199861849 9200 dbSNP
rs1008956544 9202 dbSNP
rs1410142942 9202 dbSNP
rs1486267404 9204 dbSNP
rs185435601 9211 dbSNP
rs1208097365 9222 dbSNP
rs1322779122 9223 dbSNP
rs1285052680 9240 dbSNP
rs1223378635 9241 dbSNP
rs981567956 9244 dbSNP
rs1221583970 9252 dbSNP
rs1327375073 9265 dbSNP
rs1031436612 9268 dbSNP
rs1233713960 9276 dbSNP
rs1354714309 9278 dbSNP
rs1282410971 9283 dbSNP
rs768532747 9298 dbSNP
rs776403925 9302 dbSNP
rs989872876 9303 dbSNP
rs1396276125 9317 dbSNP
rs1203967705 9336 dbSNP
rs1259247342 9337 dbSNP
rs1167523434 9350 dbSNP
rs189559845 9366 dbSNP
rs769410716 9367 dbSNP
rs980915364 9370 dbSNP
rs561329619 9374 dbSNP
rs779933249 9385 dbSNP
rs1208216265 9387 dbSNP
rs1463685429 9392 dbSNP
rs1275332698 9399 dbSNP
rs140095847 9406 dbSNP
rs1320961768 9421 dbSNP
rs1480425236 9422 dbSNP
rs1362599804 9423 dbSNP
rs1269047672 9428 dbSNP
rs1046822388 9430 dbSNP
rs192251969 9431 dbSNP
rs1326250758 9437 dbSNP
rs1460601750 9438 dbSNP
rs184313073 9453 dbSNP
rs761242745 9454 dbSNP
rs1163152130 9468 dbSNP
rs1412096512 9481 dbSNP
rs941071793 9517 dbSNP
rs1466622863 9532 dbSNP
rs1187975261 9535 dbSNP
rs1404133779 9541 dbSNP
rs1447792703 9542 dbSNP
rs1158011290 9546 dbSNP
rs1207612 9555 dbSNP
rs1402630496 9562 dbSNP
rs1488285418 9569 dbSNP
rs889961540 9586 dbSNP
rs1206412927 9592 dbSNP
rs1008785786 9597 dbSNP
rs1273906529 9607 dbSNP
rs1225540727 9610 dbSNP
rs1349335802 9616 dbSNP
rs754236522 9620 dbSNP
rs1041206210 9643 dbSNP
rs1303524390 9656 dbSNP
rs188663238 9657 dbSNP
rs1403094866 9669 dbSNP
rs1285117196 9670 dbSNP
rs1444872825 9674 dbSNP
rs899750276 9676 dbSNP
rs1346004397 9678 dbSNP
rs993245873 9682 dbSNP
rs1237730778 9685 dbSNP
rs1050929164 9688 dbSNP
rs1174363107 9689 dbSNP
rs1432779698 9700 dbSNP
rs1026020608 9701 dbSNP
rs1178713882 9730 dbSNP
rs1480875357 9735 dbSNP
rs1250807496 9747 dbSNP
rs765727660 9748 dbSNP
rs1031111871 9762 dbSNP
rs1006141273 9763 dbSNP
rs769140018 9768 dbSNP
rs1490287514 9769 dbSNP
rs1197633609 9770 dbSNP
rs1310048236 9779 dbSNP
rs1308765695 9780 dbSNP
rs969929267 9785 dbSNP
rs766780844 9786 dbSNP
rs1351413879 9788 dbSNP
rs928452985 9804 dbSNP
rs750608051 9805 dbSNP
rs1408484717 9821 dbSNP
rs956163404 9824 dbSNP
rs181085603 9863 dbSNP
rs914579459 9864 dbSNP
rs1377830542 9872 dbSNP
rs1022684296 9873 dbSNP
rs947335231 9874 dbSNP
rs969628830 9876 dbSNP
rs1376127756 9878 dbSNP
rs1161473949 9879 dbSNP
rs570295869 9880 dbSNP
rs980967838 9910 dbSNP
rs1362108431 9912 dbSNP
rs928202114 9924 dbSNP
rs1199370796 9944 dbSNP
rs1482025613 9952 dbSNP
rs1471310245 9966 dbSNP
rs186157457 9969 dbSNP
rs960889282 9970 dbSNP
rs983348790 9985 dbSNP
rs1357903538 9998 dbSNP
rs985747250 10000 dbSNP
rs911494145 10001 dbSNP
rs1400088771 10007 dbSNP
rs754911806 10022 dbSNP
rs973772132 10041 dbSNP
rs781155778 10042 dbSNP
rs1304674907 10044 dbSNP
rs1156662972 10084 dbSNP
rs1476096234 10099 dbSNP
rs1391400906 10110 dbSNP
rs1186667066 10112 dbSNP
rs1421998174 10129 dbSNP
rs1390717900 10132 dbSNP
rs1041276347 10149 dbSNP
rs932573366 10164 dbSNP
rs1464136749 10167 dbSNP
rs1265907961 10168 dbSNP
rs897321365 10172 dbSNP
rs929048728 10177 dbSNP
rs748102782 10181 dbSNP
rs1047474998 10196 dbSNP
rs1235906901 10205 dbSNP
rs16983125 10211 dbSNP
rs772992456 10214 dbSNP
rs1006270993 10224 dbSNP
rs767881528 10225 dbSNP
rs1356754201 10228 dbSNP
rs1364721663 10231 dbSNP
rs1318867992 10233 dbSNP
rs1053357982 10240 dbSNP
rs748910050 10246 dbSNP
rs1294354424 10251 dbSNP
rs549947398 10252 dbSNP
rs189877680 10257 dbSNP
rs1248587726 10263 dbSNP
rs1374764609 10267 dbSNP
rs1170508227 10269 dbSNP
rs1002789441 10283 dbSNP
rs1448421467 10289 dbSNP
rs773883553 10296 dbSNP
rs759021386 10311 dbSNP
rs1035519106 10347 dbSNP
rs1468659610 10348 dbSNP
rs955836380 10360 dbSNP
rs767161890 10369 dbSNP
rs1354830082 10375 dbSNP
rs1002148161 10377 dbSNP
rs1229232454 10386 dbSNP
rs777238510 10389 dbSNP
rs762415126 10390 dbSNP
rs1165280971 10394 dbSNP
rs761209834 10395 dbSNP
rs1443318514 10401 dbSNP
rs1331934984 10403 dbSNP
rs765641339 10416 dbSNP
rs968820415 10417 dbSNP
rs1398528651 10424 dbSNP
rs1296380957 10433 dbSNP
rs750877727 10434 dbSNP
rs1398463180 10438 dbSNP
rs1207613 10439 dbSNP
rs911225086 10440 dbSNP
rs1335436242 10458 dbSNP
rs766548545 10461 dbSNP
rs754248395 10474 dbSNP
rs1376761688 10481 dbSNP
rs1198576005 10483 dbSNP
rs982974346 10487 dbSNP
rs1253112255 10494 dbSNP
rs751635942 10499 dbSNP
rs757386683 10503 dbSNP
rs778789892 10508 dbSNP
rs930106207 10509 dbSNP
rs750683491 10522 dbSNP
rs754960463 10531 dbSNP
rs887550696 10548 dbSNP
rs932332519 10556 dbSNP
rs986455149 10567 dbSNP
rs1308431966 10578 dbSNP
rs912520746 10588 dbSNP
rs934531622 10603 dbSNP
rs1250139074 10618 dbSNP
rs1481876611 10619 dbSNP
rs758675856 10631 dbSNP
rs781278453 10643 dbSNP
rs187134880 10657 dbSNP
rs191198777 10662 dbSNP
rs1183397180 10665 dbSNP
rs1002751750 10670 dbSNP
rs780064253 10673 dbSNP
rs1250312585 10674 dbSNP
rs1043818883 10680 dbSNP
rs182569315 10685 dbSNP
rs1278021232 10723 dbSNP
rs1198895844 10725 dbSNP
rs777543547 10738 dbSNP
rs1256679668 10745 dbSNP
rs1288711245 10746 dbSNP
rs1009994772 10756 dbSNP
rs868203541 10758 dbSNP
rs1348538350 10768 dbSNP
rs1021442657 10776 dbSNP
rs1448680494 10782 dbSNP
rs1358018214 10786 dbSNP
rs528883703 10808 dbSNP
rs985557432 10829 dbSNP
rs905279694 10834 dbSNP
rs1402047662 10835 dbSNP
rs1002200647 10848 dbSNP
rs746773512 10862 dbSNP
rs1167988859 10865 dbSNP
rs1160338115 10881 dbSNP
rs184903509 10907 dbSNP
rs1410395829 10913 dbSNP
rs896749320 10924 dbSNP
rs1473424412 10932 dbSNP
rs977021963 10936 dbSNP
rs1403242224 10944 dbSNP
rs1466403670 10946 dbSNP
rs1004842012 10965 dbSNP
rs918814440 10974 dbSNP
rs951595396 10986 dbSNP
rs1274832755 10997 dbSNP
rs1454305159 11001 dbSNP
rs1303066475 11004 dbSNP
rs984310979 11026 dbSNP
rs910048987 11027 dbSNP
rs1281896249 11039 dbSNP
rs1382030837 11043 dbSNP
rs190152942 11059 dbSNP
rs1365459681 11070 dbSNP
rs745566091 11071 dbSNP
rs1432454787 11088 dbSNP
rs1028108634 11097 dbSNP
rs1219756286 11122 dbSNP
rs376403458 11127 dbSNP
rs771642752 11127 dbSNP
rs1167389709 11132 dbSNP
rs1406428987 11133 dbSNP
rs775155753 11134 dbSNP
rs769353802 11145 dbSNP
rs762398749 11154 dbSNP
rs1451475510 11164 dbSNP
rs770487980 11173 dbSNP
rs773593415 11191 dbSNP
rs1056987906 11193 dbSNP
rs891739719 11195 dbSNP
rs1010108425 11196 dbSNP
rs956002871 11211 dbSNP
rs989160640 11212 dbSNP
rs1478136974 11218 dbSNP
rs914484627 11222 dbSNP
rs1342168896 11233 dbSNP
rs1296256107 11234 dbSNP
rs1198588510 11235 dbSNP
rs1043318177 11236 dbSNP
rs1426683886 11240 dbSNP
rs1055186 11273 dbSNP
rs766788390 11279 dbSNP
rs1295628076 11280 dbSNP
rs1437699451 11283 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' guccgugcccucgaGUCCACu 5'
                        |||||| 
Target 5' --------guacgcCAGGUGa 3'
 		1 - 13
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000441463.2 | 3UTR | GUACGCCAGGUGAUUUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
THCA 0.156 0.37 0.036 0.47 7 Click to see details
THCA 0.156 0.37 0.036 0.47 7 Click to see details
THCA 0.156 0.37 0.036 0.47 7 Click to see details
THCA 0.156 0.37 0.036 0.47 7 Click to see details
THCA 0.156 0.37 0.036 0.47 7 Click to see details
THCA 0.156 0.37 0.036 0.47 7 Click to see details
102 hsa-miR-3622b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT076713 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT080212 PRKACB protein kinase cAMP-activated catalytic subunit beta 2 2
MIRT081398 GTPBP3 GTP binding protein 3, mitochondrial 2 2
MIRT107158 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT254071 BACH1 BTB domain and CNC homolog 1 2 2
MIRT409790 FOXO3 forkhead box O3 2 2
MIRT448679 MAPK9 mitogen-activated protein kinase 9 2 2
MIRT450206 ABHD15 abhydrolase domain containing 15 2 2
MIRT486621 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT489267 TTLL1 tubulin tyrosine ligase like 1 2 2
MIRT493117 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 4
MIRT494570 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497395 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT504900 CCDC86 coiled-coil domain containing 86 2 2
MIRT505192 USP46 ubiquitin specific peptidase 46 2 4
MIRT506522 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 6
MIRT508162 ABCC5 ATP binding cassette subfamily C member 5 2 8
MIRT508545 PARVG parvin gamma 2 4
MIRT509850 BIRC5 baculoviral IAP repeat containing 5 2 6
MIRT510088 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 2 8
MIRT512094 CRK CRK proto-oncogene, adaptor protein 2 4
MIRT515381 RPL7 ribosomal protein L7 2 2
MIRT519176 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT519964 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT522292 NKAP NFKB activating protein 2 2
MIRT523160 HMGB2 high mobility group box 2 2 4
MIRT525314 FANCA Fanconi anemia complementation group A 2 2
MIRT528194 PLEKHM2 pleckstrin homology and RUN domain containing M2 2 2
MIRT532885 ZNF451 zinc finger protein 451 2 2
MIRT538209 CYR61 cysteine rich angiogenic inducer 61 2 2
MIRT539497 ACTN4 actinin alpha 4 2 2
MIRT554600 RRAGC Ras related GTP binding C 2 2
MIRT562444 DCTN6 dynactin subunit 6 2 2
MIRT562748 AOC3 amine oxidase, copper containing 3 2 2
MIRT565798 SEC14L5 SEC14 like lipid binding 5 2 2
MIRT565838 SCML2 Scm polycomb group protein like 2 2 2
MIRT566072 RCC2 regulator of chromosome condensation 2 2 2
MIRT566104 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 2
MIRT572407 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT576198 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576313 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576651 Mill2 MHC I like leukocyte 2 1 1
MIRT576859 Socs6 suppressor of cytokine signaling 6 2 2
MIRT606819 BICD2 BICD cargo adaptor 2 2 2
MIRT610738 NUDT16 nudix hydrolase 16 2 4
MIRT614798 RORA RAR related orphan receptor A 2 2
MIRT619006 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 2 2
MIRT619420 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT620405 MYO1H myosin IH 2 2
MIRT624869 ABHD13 abhydrolase domain containing 13 2 2
MIRT633527 ZFP30 ZFP30 zinc finger protein 2 2
MIRT633927 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT636611 CLIC5 chloride intracellular channel 5 2 2
MIRT640616 MIOX myo-inositol oxygenase 2 2
MIRT642605 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT644624 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT655113 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT658976 DNAJB5 DnaJ heat shock protein family (Hsp40) member B5 2 4
MIRT661495 CHMP1B charged multivesicular body protein 1B 2 2
MIRT662996 TMEM59 transmembrane protein 59 2 2
MIRT663075 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT665405 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT666106 SSR1 signal sequence receptor subunit 1 2 2
MIRT669562 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT670070 ZNF783 zinc finger family member 783 2 2
MIRT671192 ZNF891 zinc finger protein 891 2 2
MIRT675361 KLHL26 kelch like family member 26 2 2
MIRT678857 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT679443 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT684163 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT684543 ZNF460 zinc finger protein 460 2 2
MIRT684674 SLC2A11 solute carrier family 2 member 11 2 2
MIRT684971 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT686006 NEK4 NIMA related kinase 4 2 2
MIRT687758 KIAA1328 KIAA1328 2 2
MIRT688961 ATXN3 ataxin 3 2 2
MIRT689409 UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI 2 2
MIRT690001 MMP17 matrix metallopeptidase 17 2 2
MIRT690165 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690202 C5orf45 MRN complex interacting protein 2 2
MIRT690477 ZNF33A zinc finger protein 33A 2 2
MIRT690566 MICA MHC class I polypeptide-related sequence A 2 2
MIRT692160 C10orf111 chromosome 10 open reading frame 111 2 2
MIRT693430 PLGLB2 plasminogen-like B2 2 2
MIRT693547 ZNF708 zinc finger protein 708 2 2
MIRT693697 PLGLB1 plasminogen-like B1 2 2
MIRT695006 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT698525 TFRC transferrin receptor 2 2
MIRT699574 SIKE1 suppressor of IKBKE 1 2 2
MIRT703446 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704397 CTSS cathepsin S 2 2
MIRT704485 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT709822 STPG1 sperm tail PG-rich repeat containing 1 2 2
MIRT710859 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT711893 INSIG2 insulin induced gene 2 2 2
MIRT713796 CPLX2 complexin 2 2 2
MIRT718800 C1GALT1C1 C1GALT1 specific chaperone 1 2 2
MIRT719501 SEC24B SEC24 homolog B, COPII coat complex component 2 2
MIRT719722 PDE6B phosphodiesterase 6B 2 2
MIRT722204 URM1 ubiquitin related modifier 1 2 2
MIRT723523 CLPTM1L CLPTM1 like 2 2
MIRT725471 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3622b-3p Platinum 23939 sensitive tissue
hsa-miR-3622b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-3622b-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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