pre-miRNA Information
pre-miRNA hsa-mir-6132   
Genomic Coordinates chr7: 117020211 - 117020319
Description Homo sapiens miR-6132 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6132
Sequence 21| AGCAGGGCUGGGGAUUGCA |39
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1272646274 4 dbSNP
rs1211969145 8 dbSNP
rs1310278496 11 dbSNP
rs1044115534 13 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CLASP1   
Synonyms MAST1
Description cytoplasmic linker associated protein 1
Transcript NM_001142273   
Other Transcripts NM_001142274 , NM_015282   
Expression
Putative miRNA Targets on CLASP1
3'UTR of CLASP1
(miRNA target sites are highlighted)
>CLASP1|NM_001142273|3'UTR
   1 TGGCAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCACCCCCTTCATCGGC
  81 TGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTATTTTGGTCCCTTCCAGCTTTTCTGTAGAATCTT
 161 ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGAATAAGAACAGAAAAGAGCC
 241 ATACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTTAAAAATCAGAGCGCT
 321 CTAGCCACTACTTGGTAGAAAGTAGCATTTTTTTTTTCAGTTAATAACATATTTGGGGGTGGGGTGGGGTGTTACTTTGT
 401 GTTCTTCCTCCTTAGCCTATTTTCTTGTGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATA
 481 TATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGATGGCCTTTTAAC
 561 AAACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCC
 641 TGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT
 721 CAAGTTTAAATCTGGACACAAAAATAAGATAAATGTATGGCATCATTTAGGGATGCCTGAGATGGCAGTTCATGAAGCAC
 801 AGAAGATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAAGACCC
 881 TCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCCGTTCAGTT
 961 CTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATTAAGA
1041 GCCAAGAAAAGCCTAGAGAGACTGGATATCACAATTTTTTTTAATTTTATAAACTGAAGTAGTTCCTTGAATGTCTGTTG
1121 ATGAAATAGTCACTGTTTAAGGAAAAAAGTAATTATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAGAAACACACTTA
1201 AAAAGAACACACATTTAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCCCCCTTTTTAAAAACACCTTTAGAGCCTAA
1281 TTACTCCAATAAAAGTAACTAGAGGTTTGGAGTCTGGTTAAATAAATTCTGAGTAAAATTCTTAAGCCAAATGGAAATTC
1361 TTAATGCAATCATGAGGACTTCTATTGTCTCTTACTGTTGTATTAGATCCTATAAATTGAACTGATTTTTCCATAAGGAA
1441 AATGCTTCTTTTGAGATTAATTCTAATAACGTATTTGCTATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGC
1521 AGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGCCCTGACCCTCTGCATTGGATGCAG
1601 GAAGCTGGGAAAGACTGATGTTGATTTGGAAACATGGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCA
1681 GGGTGCTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTTGTGTGTGTTTGTGCGTGCACCCTACA
1761 CATGTGTGGTACCTCACTGCTGCTGTTTAGGGAACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTACTGACGAGCTTTG
1841 GCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATAAGTACTGTTTGTTTATTAATATGTCATTAATGGTATTTCTTTTT
1921 TACACTCTACAAGTGAATTAGGGAGTCTCTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAG
2001 TTTCTTTATTCCTAATGCAGTTAGAAAGACCTTTCTCCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTCCCCAGTGT
2081 ACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTACTCACAAAGGGCTAGCCTTGAATGTCACTCGCCCAGTC
2161 TTCAGTCTCCTGACTTAGAGATACAATCACGTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGG
2241 AGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACCCTGACAGCTGCAGCTGCC
2321 TTGCCTTGCCGCCGCCTCCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTC
2401 TCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTG
2481 CTTCCTCCAAGCTGCTGCCTCCCCTGCAGCCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCA
2561 AGTACACTGTGTGTGCTTCCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTCTATGCGCCTCACTAGCTTACCACCCT
2641 GTGCAGGTAATGCAACTGACTTTGTCTCATCAGTCTTTTTCTTTCCCTGCCACCCTTTATTTATCAAGCGTAATGTTACA
2721 CTTTAAAGGACAGCAAATAAGAACTTTGTAGAATCCCACCAGGACTTTGCTAACAATAATGTTTGGAAATAAAGAAGTGC
2801 TCTGAAAAAATATCAGCCACCAAAATAGTTATGTTGGCACTGTGTTCACACGCATGGTCCCCACACCCCCAGGTTGGGTG
2881 GGTTTTTTTGTTTTTTGGGTTTTTTTGGGGGGGGGGGCTTTTTCATGTTACATCCATATCTGTATTTATATCTTATTTGT
2961 TTCACTTTCAAGTGTATCATGGCAAATGTACAGATTTTTTTGTTAATAATGTGCTAGGATTTGCTAAAAAAGAAAAAAAA
3041 AAAACCCTTTTGAGTTTGCCCTAGAATAAATGAGACTTAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acGUU-AGGGGUCGGGACGa 5'
            ||: | ||: |||:||| 
Target 5' tgCAGCTGCCTTGCCTTGCc 3'
2311 - 2330 137.00 -18.10
2
miRNA  3' acGUUAGGG--GUCGGGACga 5'
            ||: |||  | ||||||  
Target 5' caCAGACCCCTCTGCCCTGac 3'
1562 - 1582 135.00 -22.20
3
miRNA  3' acguuAGGGGUCGGGACGa 5'
               |:|||:| ||||| 
Target 5' tgtgcTTCCCGGACCTGCg 3'
2572 - 2590 130.00 -20.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31487691 38 COSMIC
COSN30123217 78 COSMIC
COSN30133079 137 COSMIC
COSN31562410 156 COSMIC
COSN26585132 184 COSMIC
COSN31537418 347 COSMIC
COSN17181979 775 COSMIC
COSN6205205 1559 COSMIC
COSN26632767 1743 COSMIC
COSN31596020 1823 COSMIC
COSN31609386 1865 COSMIC
COSN26653247 2004 COSMIC
COSN15008145 2020 COSMIC
COSN20140163 2129 COSMIC
COSN17191392 2142 COSMIC
COSN22123467 2761 COSMIC
COSN31552607 2906 COSMIC
COSN1782604 2907 COSMIC
COSN20097121 2907 COSMIC
COSN28667117 3032 COSMIC
COSN29069078 3032 COSMIC
COSN23728002 3033 COSMIC
COSN27372575 3033 COSMIC
COSN31594540 3043 COSMIC
COSN26632857 3052 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs200795859 2 dbSNP
rs778006284 3 dbSNP
rs542508612 4 dbSNP
rs752539763 7 dbSNP
rs1038882723 9 dbSNP
rs1282681617 12 dbSNP
rs1399442856 19 dbSNP
rs1329390790 20 dbSNP
rs767205669 26 dbSNP
rs372687335 28 dbSNP
rs575141508 30 dbSNP
rs766287366 31 dbSNP
rs1395960586 36 dbSNP
rs369069537 38 dbSNP
rs780974228 39 dbSNP
rs374727772 40 dbSNP
rs1205793317 41 dbSNP
rs765030760 42 dbSNP
rs1275872401 43 dbSNP
rs1209582225 45 dbSNP
rs538407996 46 dbSNP
rs1305253270 49 dbSNP
rs1316620436 55 dbSNP
rs1267487920 66 dbSNP
rs188324945 67 dbSNP
rs1420012337 69 dbSNP
rs1052817799 70 dbSNP
rs76710566 77 dbSNP
rs998923477 78 dbSNP
rs772414744 79 dbSNP
rs1343710400 83 dbSNP
rs906869593 86 dbSNP
rs1045971514 96 dbSNP
rs1339246402 98 dbSNP
rs894691842 102 dbSNP
rs1361164493 103 dbSNP
rs759893330 108 dbSNP
rs916060392 121 dbSNP
rs569423190 133 dbSNP
rs1195307064 136 dbSNP
rs746209730 148 dbSNP
rs1242659598 149 dbSNP
rs1452784833 151 dbSNP
rs539102289 159 dbSNP
rs565666664 209 dbSNP
rs939776731 215 dbSNP
rs1163134817 221 dbSNP
rs1363839634 234 dbSNP
rs909652978 244 dbSNP
rs1326361924 251 dbSNP
rs1429162606 253 dbSNP
rs983778596 264 dbSNP
rs908603022 277 dbSNP
rs982866010 278 dbSNP
rs1400813018 290 dbSNP
rs955368831 290 dbSNP
rs1427927171 291 dbSNP
rs184997684 292 dbSNP
rs369346865 313 dbSNP
rs377037104 318 dbSNP
rs1281491257 321 dbSNP
rs567978357 330 dbSNP
rs1206734130 332 dbSNP
rs763122628 335 dbSNP
rs1244784530 336 dbSNP
rs1444990832 337 dbSNP
rs1200668693 339 dbSNP
rs549585359 340 dbSNP
rs531377747 358 dbSNP
rs879890668 358 dbSNP
rs965169309 358 dbSNP
rs564459864 361 dbSNP
rs1240625554 367 dbSNP
rs1218167687 379 dbSNP
rs1317620339 380 dbSNP
rs1017381222 381 dbSNP
rs140034732 386 dbSNP
rs1022135321 390 dbSNP
rs193155229 415 dbSNP
rs779174916 418 dbSNP
rs1012879838 419 dbSNP
rs1313326255 425 dbSNP
rs76799534 431 dbSNP
rs541819765 434 dbSNP
rs1279692816 435 dbSNP
rs1003157110 436 dbSNP
rs892992912 440 dbSNP
rs1031346119 444 dbSNP
rs1264947761 446 dbSNP
rs1283834511 448 dbSNP
rs1381489640 449 dbSNP
rs1202801033 452 dbSNP
rs575227540 455 dbSNP
rs999042844 457 dbSNP
rs1036509146 461 dbSNP
rs942191555 469 dbSNP
rs868587796 470 dbSNP
rs1045829788 471 dbSNP
rs1290288858 488 dbSNP
rs373251173 488 dbSNP
rs556867517 490 dbSNP
rs1178617592 491 dbSNP
rs1048622604 493 dbSNP
rs757732565 498 dbSNP
rs948984182 499 dbSNP
rs1301477332 502 dbSNP
rs770064350 504 dbSNP
rs976675798 507 dbSNP
rs1038651092 509 dbSNP
rs1334751340 514 dbSNP
rs1407485530 517 dbSNP
rs1284567437 522 dbSNP
rs1324202822 543 dbSNP
rs1222809186 548 dbSNP
rs1334195109 553 dbSNP
rs924542124 557 dbSNP
rs968526157 565 dbSNP
rs977189157 565 dbSNP
rs1250108315 566 dbSNP
rs544848434 570 dbSNP
rs1201696317 576 dbSNP
rs1021708381 582 dbSNP
rs1013452306 584 dbSNP
rs1174534645 585 dbSNP
rs1375189894 586 dbSNP
rs1432141037 588 dbSNP
rs941469772 590 dbSNP
rs577504072 593 dbSNP
rs1167659105 594 dbSNP
rs1177381507 595 dbSNP
rs958720773 599 dbSNP
rs1428330479 601 dbSNP
rs1304489569 602 dbSNP
rs748310513 606 dbSNP
rs1345588831 619 dbSNP
rs1386181787 620 dbSNP
rs1417757777 621 dbSNP
rs1328079578 622 dbSNP
rs552559317 623 dbSNP
rs1227927718 629 dbSNP
rs75997861 631 dbSNP
rs982880879 632 dbSNP
rs1188522443 633 dbSNP
rs1465463001 635 dbSNP
rs1224993241 636 dbSNP
rs866822474 644 dbSNP
rs1036125779 655 dbSNP
rs549984127 669 dbSNP
rs975850294 670 dbSNP
rs772049734 672 dbSNP
rs572003256 673 dbSNP
rs1263723240 675 dbSNP
rs553743541 678 dbSNP
rs1305563197 681 dbSNP
rs1192936720 684 dbSNP
rs745633989 685 dbSNP
rs1017453589 686 dbSNP
rs990030800 687 dbSNP
rs957191462 694 dbSNP
rs1031503332 700 dbSNP
rs535053099 719 dbSNP
rs1048128071 723 dbSNP
rs1387055252 724 dbSNP
rs932414740 733 dbSNP
rs778948136 735 dbSNP
rs188554512 741 dbSNP
rs1248502214 744 dbSNP
rs1316018847 757 dbSNP
rs1461871788 762 dbSNP
rs943714291 786 dbSNP
rs1173073156 791 dbSNP
rs1024070687 792 dbSNP
rs549646738 793 dbSNP
rs894149626 798 dbSNP
rs1205054429 801 dbSNP
rs1246614752 802 dbSNP
rs947213545 810 dbSNP
rs1184542788 811 dbSNP
rs1385512370 814 dbSNP
rs755803251 818 dbSNP
rs1162111288 823 dbSNP
rs537692437 826 dbSNP
rs1454309881 830 dbSNP
rs1319775764 845 dbSNP
rs570624520 847 dbSNP
rs1386299421 852 dbSNP
rs1454403065 854 dbSNP
rs991570825 859 dbSNP
rs1378732542 860 dbSNP
rs959019690 866 dbSNP
rs1309328055 867 dbSNP
rs183331683 869 dbSNP
rs1228371933 882 dbSNP
rs1266809842 886 dbSNP
rs981408921 891 dbSNP
rs866573704 897 dbSNP
rs78524201 898 dbSNP
rs1482759647 903 dbSNP
rs1179755377 904 dbSNP
rs1006514226 905 dbSNP
rs1312497679 908 dbSNP
rs560350421 923 dbSNP
rs887931224 926 dbSNP
rs139624313 927 dbSNP
rs1305593621 931 dbSNP
rs1039810183 941 dbSNP
rs777090793 944 dbSNP
rs111319975 952 dbSNP
rs1040773674 953 dbSNP
rs990020983 958 dbSNP
rs1300092665 961 dbSNP
rs957305462 966 dbSNP
rs563215471 979 dbSNP
rs977627736 990 dbSNP
rs755769025 1003 dbSNP
rs1024434235 1005 dbSNP
rs144251306 1008 dbSNP
rs958351449 1012 dbSNP
rs902890219 1022 dbSNP
rs1041604062 1029 dbSNP
rs1326299046 1047 dbSNP
rs1224652298 1053 dbSNP
rs1161917479 1062 dbSNP
rs752416987 1062 dbSNP
rs1016649065 1068 dbSNP
rs1278448604 1070 dbSNP
rs1426707645 1072 dbSNP
rs767706879 1074 dbSNP
rs544917118 1082 dbSNP
rs1207650580 1083 dbSNP
rs1234282739 1083 dbSNP
rs1369265783 1083 dbSNP
rs1181249224 1101 dbSNP
rs1483139480 1106 dbSNP
rs887388110 1107 dbSNP
rs947315700 1111 dbSNP
rs914514349 1126 dbSNP
rs1200022103 1133 dbSNP
rs1424260908 1138 dbSNP
rs991704193 1149 dbSNP
rs149553306 1156 dbSNP
rs1355343312 1157 dbSNP
rs565482449 1160 dbSNP
rs767147195 1162 dbSNP
rs1040161704 1170 dbSNP
rs1347468054 1172 dbSNP
rs1406142987 1186 dbSNP
rs1274757860 1187 dbSNP
rs1366052074 1193 dbSNP
rs1216690568 1198 dbSNP
rs1274080037 1205 dbSNP
rs981565955 1205 dbSNP
rs1182760167 1212 dbSNP
rs1342502451 1218 dbSNP
rs942825227 1220 dbSNP
rs1271909038 1222 dbSNP
rs915221752 1224 dbSNP
rs1224262569 1227 dbSNP
rs1053741991 1230 dbSNP
rs755387335 1231 dbSNP
rs1356696767 1233 dbSNP
rs984805735 1238 dbSNP
rs192609431 1239 dbSNP
rs924498836 1243 dbSNP
rs1309825025 1250 dbSNP
rs1410915304 1251 dbSNP
rs1345276919 1254 dbSNP
rs185627111 1260 dbSNP
rs1477160199 1265 dbSNP
rs977367965 1267 dbSNP
rs572125365 1271 dbSNP
rs1029252960 1284 dbSNP
rs1301755031 1286 dbSNP
rs971603791 1295 dbSNP
rs1271203419 1304 dbSNP
rs553561720 1318 dbSNP
rs991234949 1326 dbSNP
rs547645631 1340 dbSNP
rs1294975736 1346 dbSNP
rs958467540 1347 dbSNP
rs1361101850 1360 dbSNP
rs1209918770 1365 dbSNP
rs1288455849 1369 dbSNP
rs1449854834 1371 dbSNP
rs138231136 1384 dbSNP
rs902839271 1388 dbSNP
rs1464257820 1394 dbSNP
rs1159835145 1400 dbSNP
rs766929124 1402 dbSNP
rs774158562 1409 dbSNP
rs951047453 1426 dbSNP
rs747062521 1431 dbSNP
rs1411709806 1433 dbSNP
rs893010894 1434 dbSNP
rs1026279141 1437 dbSNP
rs145666707 1447 dbSNP
rs1266683152 1461 dbSNP
rs928489311 1470 dbSNP
rs1045838678 1471 dbSNP
rs1245051607 1473 dbSNP
rs556088812 1479 dbSNP
rs1018466702 1480 dbSNP
rs907969705 1486 dbSNP
rs1202962284 1493 dbSNP
rs1352247889 1503 dbSNP
rs527623780 1504 dbSNP
rs1225444592 1506 dbSNP
rs1006913983 1507 dbSNP
rs1464358730 1510 dbSNP
rs1268132088 1519 dbSNP
rs1244728040 1526 dbSNP
rs893861555 1530 dbSNP
rs1053815928 1535 dbSNP
rs935294179 1541 dbSNP
rs537753562 1557 dbSNP
rs902519358 1564 dbSNP
rs1235853217 1569 dbSNP
rs1471211774 1570 dbSNP
rs1042018261 1571 dbSNP
rs1159951925 1583 dbSNP
rs1222369436 1590 dbSNP
rs369053885 1590 dbSNP
rs922174062 1592 dbSNP
rs1456059148 1595 dbSNP
rs975055640 1597 dbSNP
rs1281901688 1608 dbSNP
rs1225773723 1616 dbSNP
rs1403353817 1618 dbSNP
rs1396292029 1638 dbSNP
rs950035198 1650 dbSNP
rs966169235 1656 dbSNP
rs1380690947 1675 dbSNP
rs1387243228 1682 dbSNP
rs1338288365 1683 dbSNP
rs1443786765 1685 dbSNP
rs1321384639 1687 dbSNP
rs1469346484 1689 dbSNP
rs367614507 1690 dbSNP
rs540674850 1691 dbSNP
rs991349479 1691 dbSNP
rs1178462279 1692 dbSNP
rs1276812673 1692 dbSNP
rs1491188702 1692 dbSNP
rs1183004899 1693 dbSNP
rs1478252879 1693 dbSNP
rs867643082 1693 dbSNP
rs937172095 1693 dbSNP
rs1372241870 1694 dbSNP
rs1190580776 1696 dbSNP
rs1202189119 1704 dbSNP
rs1378629585 1704 dbSNP
rs909610245 1705 dbSNP
rs1171148929 1707 dbSNP
rs1399619870 1711 dbSNP
rs1448436298 1712 dbSNP
rs1248245676 1714 dbSNP
rs1202538742 1715 dbSNP
rs1459563813 1716 dbSNP
rs983875786 1717 dbSNP
rs1202649700 1719 dbSNP
rs1407970017 1721 dbSNP
rs1285139478 1722 dbSNP
rs1331568851 1723 dbSNP
rs951087132 1724 dbSNP
rs1232266069 1725 dbSNP
rs1253964837 1725 dbSNP
rs1020000569 1726 dbSNP
rs1025344373 1726 dbSNP
rs1011621700 1727 dbSNP
rs1482103459 1728 dbSNP
rs1346163040 1729 dbSNP
rs892843362 1729 dbSNP
rs1168812686 1730 dbSNP
rs1197223251 1730 dbSNP
rs1268705811 1730 dbSNP
rs1294706208 1730 dbSNP
rs1330342670 1730 dbSNP
rs1367057640 1730 dbSNP
rs1369502858 1730 dbSNP
rs1375131741 1730 dbSNP
rs1386131017 1730 dbSNP
rs1391379507 1730 dbSNP
rs1427296510 1730 dbSNP
rs1433048801 1730 dbSNP
rs1450983251 1730 dbSNP
rs3839033 1730 dbSNP
rs764961023 1730 dbSNP
rs879133868 1730 dbSNP
rs1208509795 1731 dbSNP
rs1246558369 1731 dbSNP
rs7421055 1733 dbSNP
rs1183208066 1734 dbSNP
rs1256309108 1734 dbSNP
rs1257598463 1734 dbSNP
rs1422751753 1734 dbSNP
rs965683551 1734 dbSNP
rs1225697183 1735 dbSNP
rs1367696891 1737 dbSNP
rs1298584256 1738 dbSNP
rs1158228021 1743 dbSNP
rs13395216 1743 dbSNP
rs1386138766 1743 dbSNP
rs1378666305 1745 dbSNP
rs570616718 1746 dbSNP
rs1001490210 1747 dbSNP
rs1452059016 1748 dbSNP
rs552366730 1749 dbSNP
rs1351708950 1752 dbSNP
rs893978953 1754 dbSNP
rs1032353890 1755 dbSNP
rs999598666 1756 dbSNP
rs1338649437 1763 dbSNP
rs111713630 1764 dbSNP
rs1211204288 1769 dbSNP
rs1256262168 1771 dbSNP
rs72965491 1772 dbSNP
rs1179624206 1773 dbSNP
rs1165998207 1775 dbSNP
rs1046417821 1776 dbSNP
rs13395135 1788 dbSNP
rs1181331148 1795 dbSNP
rs895705686 1796 dbSNP
rs763308712 1798 dbSNP
rs937119766 1803 dbSNP
rs773341867 1804 dbSNP
rs983866015 1805 dbSNP
rs1310006751 1806 dbSNP
rs561910779 1807 dbSNP
rs1409800950 1824 dbSNP
rs918232124 1832 dbSNP
rs1220183223 1833 dbSNP
rs540854073 1833 dbSNP
rs1212870258 1836 dbSNP
rs1443568652 1847 dbSNP
rs1300952525 1848 dbSNP
rs1272911430 1851 dbSNP
rs976414018 1854 dbSNP
rs1344719912 1863 dbSNP
rs1276210881 1874 dbSNP
rs1483107751 1881 dbSNP
rs965434268 1884 dbSNP
rs966244373 1886 dbSNP
rs1245461368 1891 dbSNP
rs1478934633 1907 dbSNP
rs560282966 1909 dbSNP
rs985684207 1911 dbSNP
rs1286095936 1922 dbSNP
rs1371347845 1925 dbSNP
rs958190971 1926 dbSNP
rs1306190386 1928 dbSNP
rs1352141239 1929 dbSNP
rs978198048 1936 dbSNP
rs1293346326 1941 dbSNP
rs1335150217 1942 dbSNP
rs1032512585 1947 dbSNP
rs1066 1948 dbSNP
rs141015429 1949 dbSNP
rs1230011178 1952 dbSNP
rs1011360299 1958 dbSNP
rs1270247730 1964 dbSNP
rs1431428940 1967 dbSNP
rs1025493615 1969 dbSNP
rs1222213611 1978 dbSNP
rs1013565869 1979 dbSNP
rs138067696 1981 dbSNP
rs867308982 1982 dbSNP
rs1055687239 1983 dbSNP
rs1391051259 1984 dbSNP
rs145447081 1988 dbSNP
rs1166843233 1990 dbSNP
rs1416009163 1993 dbSNP
rs1406524041 1996 dbSNP
rs1386706362 1997 dbSNP
rs1045678068 2011 dbSNP
rs888280629 2013 dbSNP
rs777042368 2014 dbSNP
rs929809377 2017 dbSNP
rs1180236754 2018 dbSNP
rs918317849 2019 dbSNP
rs930768208 2030 dbSNP
rs1228336420 2040 dbSNP
rs1289064378 2042 dbSNP
rs1332537105 2044 dbSNP
rs13394911 2048 dbSNP
rs565410528 2069 dbSNP
rs540847537 2070 dbSNP
rs1248383594 2084 dbSNP
rs530316013 2086 dbSNP
rs375711652 2096 dbSNP
rs912107702 2097 dbSNP
rs769906473 2101 dbSNP
rs1229001935 2103 dbSNP
rs1349995306 2104 dbSNP
rs1277721834 2105 dbSNP
rs1162703286 2110 dbSNP
rs985674359 2111 dbSNP
rs1459266879 2114 dbSNP
rs1160426876 2115 dbSNP
rs1388360156 2116 dbSNP
rs1411518329 2117 dbSNP
rs1456431906 2119 dbSNP
rs1350887937 2129 dbSNP
rs958305235 2129 dbSNP
rs1315802393 2133 dbSNP
rs925442206 2135 dbSNP
rs978354649 2136 dbSNP
rs768966677 2137 dbSNP
rs978255439 2144 dbSNP
rs967299815 2146 dbSNP
rs945542953 2150 dbSNP
rs1230116441 2152 dbSNP
rs373449917 2153 dbSNP
rs1014096659 2157 dbSNP
rs1328205238 2164 dbSNP
rs559853554 2169 dbSNP
rs745687208 2174 dbSNP
rs78353005 2180 dbSNP
rs990290167 2184 dbSNP
rs545359741 2185 dbSNP
rs574149898 2186 dbSNP
rs1001437632 2190 dbSNP
rs555750511 2191 dbSNP
rs1174636015 2197 dbSNP
rs1048806125 2198 dbSNP
rs1403933369 2208 dbSNP
rs1157356473 2213 dbSNP
rs993974981 2213 dbSNP
rs1373087028 2216 dbSNP
rs1411645227 2225 dbSNP
rs375267152 2228 dbSNP
rs979723960 2228 dbSNP
rs544524698 2231 dbSNP
rs943823798 2232 dbSNP
rs1004830973 2233 dbSNP
rs1278362758 2234 dbSNP
rs770916623 2235 dbSNP
rs1027465801 2236 dbSNP
rs543771630 2237 dbSNP
rs1049414511 2239 dbSNP
rs577090149 2240 dbSNP
rs900550573 2242 dbSNP
rs1248705615 2246 dbSNP
rs936354098 2247 dbSNP
rs944708095 2248 dbSNP
rs796945071 2249 dbSNP
rs371865214 2253 dbSNP
rs182356701 2254 dbSNP
rs1325360192 2256 dbSNP
rs945532084 2258 dbSNP
rs918115743 2261 dbSNP
rs992254231 2264 dbSNP
rs1446510270 2265 dbSNP
rs534026288 2266 dbSNP
rs1331461714 2267 dbSNP
rs1282156915 2269 dbSNP
rs527989213 2275 dbSNP
rs1301531447 2278 dbSNP
rs1344535979 2279 dbSNP
rs1033774891 2280 dbSNP
rs1229258320 2286 dbSNP
rs1273981418 2287 dbSNP
rs76901620 2288 dbSNP
rs1268562981 2290 dbSNP
rs952026587 2291 dbSNP
rs915499602 2293 dbSNP
rs1026867782 2295 dbSNP
rs772486510 2298 dbSNP
rs989627760 2304 dbSNP
rs1369419344 2306 dbSNP
rs190094489 2312 dbSNP
rs1460456744 2316 dbSNP
rs1164947100 2322 dbSNP
rs186568139 2330 dbSNP
rs1323588457 2331 dbSNP
rs1436046738 2331 dbSNP
rs551015229 2331 dbSNP
rs1019889296 2333 dbSNP
rs1007919818 2334 dbSNP
rs1247006562 2337 dbSNP
rs971037317 2338 dbSNP
rs1356208671 2340 dbSNP
rs1212267403 2342 dbSNP
rs1250257996 2344 dbSNP
rs1466031128 2346 dbSNP
rs2312608 2347 dbSNP
rs889504379 2350 dbSNP
rs1413395459 2351 dbSNP
rs983134025 2352 dbSNP
rs532378225 2355 dbSNP
rs1049487739 2357 dbSNP
rs1431823993 2358 dbSNP
rs936303199 2358 dbSNP
rs903538932 2359 dbSNP
rs1460837581 2362 dbSNP
rs1162574258 2367 dbSNP
rs1390553994 2370 dbSNP
rs1427625470 2371 dbSNP
rs1191995178 2376 dbSNP
rs1475246170 2379 dbSNP
rs1360043173 2380 dbSNP
rs1397888229 2386 dbSNP
rs1313507514 2394 dbSNP
rs1355432382 2395 dbSNP
rs1042638146 2402 dbSNP
rs1027993675 2404 dbSNP
rs1270486605 2404 dbSNP
rs1210726846 2412 dbSNP
rs374276892 2415 dbSNP
rs1465381888 2417 dbSNP
rs571939756 2418 dbSNP
rs934940 2419 dbSNP
rs528732378 2423 dbSNP
rs1256204476 2432 dbSNP
rs1313754733 2436 dbSNP
rs1301637252 2441 dbSNP
rs938176567 2443 dbSNP
rs926652614 2444 dbSNP
rs1359489407 2447 dbSNP
rs890439981 2452 dbSNP
rs984880436 2454 dbSNP
rs952016673 2456 dbSNP
rs1435226185 2457 dbSNP
rs771204059 2466 dbSNP
rs1412952468 2467 dbSNP
rs1009529310 2473 dbSNP
rs972657547 2475 dbSNP
rs961619153 2480 dbSNP
rs561151715 2481 dbSNP
rs1305278027 2487 dbSNP
rs12623762 2490 dbSNP
rs1361398999 2491 dbSNP
rs1177320615 2493 dbSNP
rs889619997 2497 dbSNP
rs1485065093 2501 dbSNP
rs1027996109 2502 dbSNP
rs1253921635 2503 dbSNP
rs1176450346 2505 dbSNP
rs1405521452 2506 dbSNP
rs529757180 2507 dbSNP
rs1388596665 2509 dbSNP
rs926811952 2513 dbSNP
rs1394635941 2515 dbSNP
rs77027206 2517 dbSNP
rs1309878404 2521 dbSNP
rs903517223 2522 dbSNP
rs1436046614 2525 dbSNP
rs544224228 2526 dbSNP
rs917015339 2531 dbSNP
rs576747000 2533 dbSNP
rs945637611 2534 dbSNP
rs1303694421 2538 dbSNP
rs1346651041 2539 dbSNP
rs575073651 2540 dbSNP
rs371156139 2544 dbSNP
rs973763220 2545 dbSNP
rs938125609 2547 dbSNP
rs926811073 2548 dbSNP
rs1203720228 2549 dbSNP
rs115718122 2560 dbSNP
rs930737580 2566 dbSNP
rs1008705401 2568 dbSNP
rs919251149 2569 dbSNP
rs1170607765 2574 dbSNP
rs1390857670 2580 dbSNP
rs554818983 2581 dbSNP
rs112871534 2582 dbSNP
rs1276362191 2584 dbSNP
rs1352055125 2589 dbSNP
rs912429710 2590 dbSNP
rs1009566132 2591 dbSNP
rs538060441 2592 dbSNP
rs557473343 2593 dbSNP
rs1381404283 2596 dbSNP
rs1028153324 2600 dbSNP
rs1000553973 2601 dbSNP
rs1362065113 2603 dbSNP
rs1213412844 2605 dbSNP
rs1270834509 2607 dbSNP
rs1397253837 2615 dbSNP
rs539060986 2616 dbSNP
rs1272279141 2617 dbSNP
rs1467360456 2619 dbSNP
rs1190738091 2620 dbSNP
rs1242858414 2625 dbSNP
rs968233429 2628 dbSNP
rs1475128062 2633 dbSNP
rs1020718090 2637 dbSNP
rs1416614880 2640 dbSNP
rs1406435517 2647 dbSNP
rs1164745720 2655 dbSNP
rs867721049 2656 dbSNP
rs1392723568 2668 dbSNP
rs1303907824 2686 dbSNP
rs1322146603 2705 dbSNP
rs142070246 2709 dbSNP
rs762022609 2710 dbSNP
rs1429443253 2712 dbSNP
rs1369049687 2713 dbSNP
rs546928454 2715 dbSNP
rs1233818585 2719 dbSNP
rs1002494344 2726 dbSNP
rs905341286 2729 dbSNP
rs1332431718 2743 dbSNP
rs1049286009 2754 dbSNP
rs1384842703 2775 dbSNP
rs1047551494 2781 dbSNP
rs930840252 2789 dbSNP
rs1162841421 2791 dbSNP
rs367737519 2794 dbSNP
rs1213791274 2797 dbSNP
rs2919051 2797 dbSNP
rs1475855067 2800 dbSNP
rs754473145 2811 dbSNP
rs1256814124 2813 dbSNP
rs920285567 2832 dbSNP
rs764435886 2847 dbSNP
rs183215778 2851 dbSNP
rs1205599523 2854 dbSNP
rs1036451182 2857 dbSNP
rs1385283134 2864 dbSNP
rs1399727274 2866 dbSNP
rs944670347 2870 dbSNP
rs149025863 2876 dbSNP
rs1360373728 2878 dbSNP
rs1414803602 2882 dbSNP
rs1312204364 2884 dbSNP
rs1353442254 2887 dbSNP
rs1230024241 2888 dbSNP
rs1279895689 2890 dbSNP
rs530988806 2896 dbSNP
rs200661696 2897 dbSNP
rs200097989 2900 dbSNP
rs1486044827 2901 dbSNP
rs910484483 2906 dbSNP
rs1127855 2907 dbSNP
rs1256050877 2907 dbSNP
rs1491458978 2907 dbSNP
rs1434831712 2908 dbSNP
rs987223461 2908 dbSNP
rs954581222 2909 dbSNP
rs1373607120 2910 dbSNP
rs988659202 2911 dbSNP
rs1334966840 2912 dbSNP
rs958044908 2913 dbSNP
rs1314096641 2915 dbSNP
rs371388032 2917 dbSNP
rs113677725 2918 dbSNP
rs1491193974 2918 dbSNP
rs34948157 2918 dbSNP
rs753459747 2918 dbSNP
rs796401263 2918 dbSNP
rs760219005 2919 dbSNP
rs760705170 2919 dbSNP
rs1436434528 2921 dbSNP
rs1201410614 2925 dbSNP
rs1032733248 2931 dbSNP
rs1172516017 2936 dbSNP
rs1392716257 2938 dbSNP
rs1349026454 2954 dbSNP
rs1463022589 2954 dbSNP
rs147589573 2956 dbSNP
rs1410817798 2957 dbSNP
rs1365243684 2961 dbSNP
rs979198365 2965 dbSNP
rs1395640403 2980 dbSNP
rs905410055 2993 dbSNP
rs1291958966 3002 dbSNP
rs13004374 3017 dbSNP
rs1372052689 3019 dbSNP
rs1440442269 3021 dbSNP
rs1459527328 3023 dbSNP
rs1369070254 3024 dbSNP
rs1158290072 3025 dbSNP
rs559114647 3027 dbSNP
rs967115909 3032 dbSNP
rs1025233787 3033 dbSNP
rs543963952 3033 dbSNP
rs1013759005 3034 dbSNP
rs1212053030 3035 dbSNP
rs34623568 3035 dbSNP
rs34719830 3036 dbSNP
rs113839646 3037 dbSNP
rs3210926 3037 dbSNP
rs1429811469 3040 dbSNP
rs887308426 3044 dbSNP
rs1372487603 3045 dbSNP
rs1460375397 3045 dbSNP
rs34452254 3045 dbSNP
rs879228623 3045 dbSNP
rs967907835 3045 dbSNP
rs1182693579 3046 dbSNP
rs929072325 3048 dbSNP
rs1490115618 3061 dbSNP
rs1294915520 3080 dbSNP
rs1021097147 3081 dbSNP
rs796203084 3084 dbSNP
rs532185558 3085 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acguuagggguCGGGACGa 5'
                     |||:||| 
Target 5' -----------GCCUUGCc 3'
1 - 8
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acguuagggguCGGGACGa 5'
                     |||:||| 
Target 5' -----------GCCUUGCc 3'
1 - 8
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM545215
Method / RBP PAR-CLIP / AGO4
Cell line / Condition HEK293 / Control
Location of target site ENST00000409078.3 | 3UTR | GCCUUGCCGCCGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000409078.3 | 3UTR | GCCUUGCCGCCGCCUCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
82 hsa-miR-6132 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT067294 NECAP1 NECAP endocytosis associated 1 2 10
MIRT100110 ABT1 activator of basal transcription 1 2 8
MIRT358583 CANX calnexin 2 2
MIRT445247 SEMA5A semaphorin 5A 2 2
MIRT445764 CCND3 cyclin D3 2 2
MIRT452388 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452829 FAM131B family with sequence similarity 131 member B 2 2
MIRT453450 GLG1 golgi glycoprotein 1 2 2
MIRT455435 ID3 inhibitor of DNA binding 3, HLH protein 2 2
MIRT460629 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT461607 DPH2 DPH2 homolog 2 2
MIRT461989 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT464258 VCL vinculin 2 2
MIRT465713 TNFAIP1 TNF alpha induced protein 1 2 2
MIRT466475 TECPR2 tectonin beta-propeller repeat containing 2 2 7
MIRT467119 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT468299 SFT2D2 SFT2 domain containing 2 2 2
MIRT469696 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT469904 PTRF caveolae associated protein 1 2 2
MIRT470015 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT471385 PDPR pyruvate dehydrogenase phosphatase regulatory subunit 2 2
MIRT471409 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT471719 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT473608 MARK2 microtubule affinity regulating kinase 2 2 2
MIRT476328 GLTSCR1L BRD4 interacting chromatin remodeling complex associated protein like 2 2
MIRT479448 CDK6 cyclin dependent kinase 6 2 2
MIRT482032 AMER1 APC membrane recruitment protein 1 2 2
MIRT482360 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT484661 HOXD3 homeobox D3 2 4
MIRT486828 NDOR1 NADPH dependent diflavin oxidoreductase 1 2 2
MIRT487069 CLASP1 cytoplasmic linker associated protein 1 2 4
MIRT487196 NFASC neurofascin 2 4
MIRT487448 TFAP2B transcription factor AP-2 beta 2 4
MIRT487517 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT487640 BRSK2 BR serine/threonine kinase 2 2 4
MIRT487755 SKI SKI proto-oncogene 2 4
MIRT489944 CPLX1 complexin 1 2 2
MIRT491101 MSI1 musashi RNA binding protein 1 2 4
MIRT491181 LAMA5 laminin subunit alpha 5 2 2
MIRT492355 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493918 FAM127B retrotransposon Gag like 8A 2 4
MIRT493932 FAM127A retrotransposon Gag like 8C 2 4
MIRT494679 ARID3A AT-rich interaction domain 3A 2 2
MIRT494814 AKAP11 A-kinase anchoring protein 11 2 2
MIRT494835 ADCY9 adenylate cyclase 9 2 2
MIRT495455 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT496962 MAP1LC3B microtubule associated protein 1 light chain 3 beta 2 2
MIRT526228 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT531028 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT557110 HOXA3 homeobox A3 2 2
MIRT560514 POGK pogo transposable element derived with KRAB domain 2 2
MIRT567753 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT569608 TRIM29 tripartite motif containing 29 2 2
MIRT570242 CPNE5 copine 5 2 2
MIRT572327 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT572373 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT575024 Tecpr2 tectonin beta-propeller repeat containing 2 2 5
MIRT576146 Hmox1 heme oxygenase 1 2 2
MIRT612443 SMOC2 SPARC related modular calcium binding 2 2 2
MIRT615404 VDAC2 voltage dependent anion channel 2 2 2
MIRT629114 CYCS cytochrome c, somatic 2 2
MIRT631362 FOXI2 forkhead box I2 2 2
MIRT639322 THBD thrombomodulin 2 2
MIRT643797 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT669687 ABLIM1 actin binding LIM protein 1 2 2
MIRT670595 LLGL1 LLGL1, scribble cell polarity complex component 2 4
MIRT691190 NIF3L1 NGG1 interacting factor 3 like 1 2 2
MIRT691688 FLOT2 flotillin 2 2 2
MIRT697127 OTUD5 OTU deubiquitinase 5 2 2
MIRT700814 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT701248 NUP35 nucleoporin 35 2 2
MIRT702362 KLHL15 kelch like family member 15 2 2
MIRT703325 GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 2 2
MIRT706060 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT710475 CDH5 cadherin 5 2 2
MIRT713018 SLC4A2 solute carrier family 4 member 2 2 2
MIRT716427 RAB15 RAB15, member RAS oncogene family 2 2
MIRT718093 ABHD12 abhydrolase domain containing 12 2 2
MIRT718542 PIGQ phosphatidylinositol glycan anchor biosynthesis class Q 2 2
MIRT719122 CACFD1 calcium channel flower domain containing 1 2 2
MIRT721393 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT736283 CDC42 cell division cycle 42 2 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6132 Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-6132 Dabrafenib 44462760 NSC764134 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-6132 Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-6132 Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-6132 Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-6132 Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-6132 Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-6132 Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-6132 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

Error report submission