miRTarBase - #MIRT488836


—
pre-miRNA Information
pre-miRNA hsa-mir-4259   
Genomic Coordinates chr1: 159899979 - 159900079
Description Homo sapiens miR-4259 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4259
Sequence 70| CAGUUGGGUCUAGGGGUCAGGA |91
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1237551241 4 dbSNP
rs772339482 8 dbSNP
rs1314022637 15 dbSNP
rs1414601728 19 dbSNP
rs746067692 20 dbSNP
rs779101228 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MRRF   
Synonyms MRFF, MTRRF, RRF
Description mitochondrial ribosome recycling factor
Transcript NM_199177   
Other Transcripts NM_138777 , NM_001173512   
Expression
Putative miRNA Targets on MRRF
3'UTR of MRRF
(miRNA target sites are highlighted)		 
>MRRF|NM_199177|3'UTR
   1 AGACCAAAGAACTCCTTGGATGAAAGTCCACTGGGGCCAGCAATACTCCAGAGCCCAGTTTCTGCTGGATCCCATGGGTG
  81 GCACATTGGGACTTCTCTCCCTCCCCCATCTACACAGAAGACTGTCACCATGCTGACAGAAGCCTGTCCTTGTAAGGCCC
 161 AGCCTTCCAGGGGAACACTCAGACATGTTCATTCTCTTCCTGCTTCTGCTCTGGGCCGGTGGGTGGCTCTCAGAAAATAC
 241 TTGCTGCTGGCAAAAGGCCTGTACTCAGGCATTTGCTTTGACTTGATGTTGCCAAGGGACTGAGGCCATTGGCAGGCTTA
 321 GTACCACCTGCTCCTCATCTTAGGAGTCTCCTTTTCAAATAATTAGGCTCTGTTCCCATTTTAAAACTCTGATATTGGCC
 401 TTCACCTGTGACTGGACACTTTACTAGAGGCCCATTTTCACTAAACAATAAAATCTAAATAAATTGGAAGGAATAACAAC
 481 CACAAAGGAAAGAATAGAGTTGGTCTGGATTGATGATCACTGAGGATCTGTATGTGAGGCACCCATAACAGTAGTTTTGC
 561 CTGTGAGTCGTCTTCACACATGCTGTTTTCTCTGCCTGGCTCTCTCTTCCCCTCCTTACCTGGCCAGTCCTGTTTATCAT
 641 CAGGCCTTGTCTTGGATATCACGTCCTCTGGGAAGTCTTCTTTTCCCCTCTAACCTAGGACCCTCATTACCGGCTCTCAT
 721 AGCACAGTCTACTGCTTTGTACGAATTCTAAGTATTCTTGTTGCACTTAATTAGCCTGTATATCCTCAGAACTTTGTGTA
 801 ATGCCTGGAGCATAGTAGGCAGTCATATGTTGTATCGTGAATAAATTGCACATAGTAGCTACCCAGCAAATGCTGACTTC
 881 TTTTCTTTCTAGTCTTAACACTCCCTTTCTATCATTTTCCACTCTTGTACTTGTTCTCAACATTTACTTGGTAGTGACAT
 961 ACCTTTCCTGCAGGGCCTGCCCATTGTTGACAGACAAGTAGTTTATTGTGGCTTATCTTCGGATACTGGGTTATTAGGTT
1041 TTTTTCCCTCCAATTATTTTTTATTCATTCATTCATTCCTAATATAGCCATTATGAGTTAGGTATAGTTCTAGGCATTAT
1121 TTATAATCTTGACAGTAAACTTAAGAGATGTGTATTATCTTCATTTACAAATAGGAAAACTAAGTCTTGACAGTATTAGG
1201 TAATTTGCCCAAAGTAACAAAGCAAAGCTGATCAGTGGTAGAAGGTTTTCATGATTCATTGTCAGCGTCATTTACATAGA
1281 GGTGAAGTTTCTTGTGCAGGGTTACACACCTAGCAAGTAGCAGAGCTGGCATTCAAATTGAGGCCTGATGTGCTAATGTA
1361 AAAGGAAAAAAACAAACTTTTTTTCCTTTTGTACTTTCACACTCAACATGGAACACTTCTGTGACAAGGTGTGTGAGTTT
1441 GTTTCCCCCACACACCAAGCAATTCTCCAGCAGACACCAACTGGGTATCCTATAATTCAATTCATTTCTGACATTACCTG
1521 GAAATAGTGTCAGATCCCACAGGTTGAGGGCTCCATCTCCCAAGACTGCCAACACTTTTGATGCCAGTCATGAGTCTGGG
1601 CCACCCATACTCCTGACTGACCAACTACAAACTAGAGTCCTTGATTTCCTTTGGTTCAGTTAATTTCCTAGGACAGCTCA
1681 CACAACTCAGGGAAACACGTTCACTGGTTTATTATAAAAGATACAGCTGAACAGCCCAATGAAGGAGGTACACAGGGCAA
1761 GGTTGAGGGAGAGGGAGAGGGTGTGGAGCTTCCATGCCTTCTCTGGGCTCACACTCTCTCAGCACCTCACCAATCTGGAA
1841 GGAACCACTGTGTCCTGCTGCCTTCATTAGCATTTAGTGAGCACCAATTGTTTGTCAGGTGCTGAACTATGTACTGGCAA
1921 TACAAAAATGGGAAAGATATGACCCCTGTTTTGGGGGGGTACATAGTGCACTGAACTAAATTGCTGTCTATAATAATCTA
2001 TTGGGTGGAAAAGTAGGAAGTTCATTCCAGTTCTGCAAGGTGTCTGCTTTCAGAATGGAGCCCACTTTGGTGGTGGCAAG
2081 GCCTGGCTGAGTTCTTTCAAAGCAACATCCAACTTCTCTTTGCTCTTTGACTTCCTCCAGATTCTCTCCTGTGCTGGAGG
2161 TAATAAGGGTTGCACTTCCCTCTTTACTTACACTGGTGAAACATGCAGTGAGGATTCAAGGTCAAAATTGGGTCAAAGTT
2241 AAACTAACACAGTCTCCTGCCCCACTTACCTGTCCTCTAACCCCATCCACCAGCCCTAAGTGGTCATCACATGATCAGAA
2321 GTCAGCTGGGGGAAGAGCAGGGATAGATAGAGCAATTAAGGAGCCTCTTTTGGGGTAAGCCACATGACAGGGGCTTTGCA
2401 ACAGTCTTTCATGAGTGGCCGAAATCCCCCACTCACTGCAAATGTGCTTCTCAAAGATGCAGGATTTTTTAATAAACAGA
2481 GGAAATGATAAATTATGTTGTAATTCCACTCCAAAGGCATTTGGTTCTTAACAGCCAAATCCTCTGTAGTCTTTAAATAA
2561 ACAAAAACTTATTTGGTGAACAGACAGGGAGGAAAATGAAAGATTTTCTGTACTTGGGTTCCACATGTCAACAATTTCTC
2641 TCCTGTGTGTATGTTGGCCAAAGCTGTATCATGATAAATGAATAAAGGAAAACCTCGAGCCCAGGGCAGTCAGACAGCTC
2721 AAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agGACUGGGGA-----UC----UGGGUUGAc 5'
            |||| ::||     ||    |:|||||| 
Target 5' ggCTGAGTTCTTTCAAAGCAACATCCAACTt 3'
 2085 - 2115 138.00 -15.12
2 
miRNA  3' agGAC----UGGGGAUCUGGGUUGAc 5'
            |||    |||| ||  ||::||| 
Target 5' gtCTGGGCCACCCATACTCCTGACTg 3'
 1594 - 1619 130.00 -19.30
3 
miRNA  3' agGACUGGGG-A-UCUGGGUUGac 5'
            ||| ||:: | ||:||||:|  
Target 5' gcCTGTCCTTGTAAGGCCCAGCct 3'
 142 - 165 128.00 -24.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM3653866 6 COSMIC
COSM5505277 7 COSMIC
COSN26985115 35 COSMIC
COSN30468012 35 COSMIC
COSN30490917 36 COSMIC
COSN30187923 38 COSMIC
COSN31545210 45 COSMIC
COSN30137785 53 COSMIC
COSN26985114 66 COSMIC
COSN30109148 73 COSMIC
COSN30183336 98 COSMIC
COSN30452131 104 COSMIC
COSN30533287 120 COSMIC
COSN26748274 322 COSMIC
COSN22305997 523 COSMIC
COSN16057199 664 COSMIC
COSN6379288 835 COSMIC
COSN8331600 1148 COSMIC
COSN2309792 1414 COSMIC
COSN28489258 2726 COSMIC
COSN2309793 2792 COSMIC
COSN6379289 2859 COSMIC
COSN23709124 3071 COSMIC
COSN27257546 3092 COSMIC
COSN23260591 3225 COSMIC
COSN27406386 3532 COSMIC
COSN30228522 3636 COSMIC
COSN5697307 3815 COSMIC
COSN29218320 4131 COSMIC
COSN25422527 4274 COSMIC
COSN22359944 4608 COSMIC
COSN29073818 5074 COSMIC
COSN25715494 5272 COSMIC
COSN23970923 5335 COSMIC
COSN25714383 5341 COSMIC
COSN6379290 5683 COSMIC
COSN6379291 5688 COSMIC
COSN1373036 6335 COSMIC
COSN6379292 6630 COSMIC
COSN29364280 6654 COSMIC
COSN16386212 7265 COSMIC
COSN1373037 7784 COSMIC
COSN2309794 8431 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs55706822 2 dbSNP
rs1274037187 5 dbSNP
rs762777899 10 dbSNP
rs147161287 15 dbSNP
rs766460621 17 dbSNP
rs1475998387 20 dbSNP
rs377666526 21 dbSNP
rs1326213144 26 dbSNP
rs1180785275 30 dbSNP
rs751385219 32 dbSNP
rs1046462307 36 dbSNP
rs1475898222 43 dbSNP
rs371161806 46 dbSNP
rs1387432409 53 dbSNP
rs1455484390 58 dbSNP
rs1319999594 66 dbSNP
rs1345740944 73 dbSNP
rs59288555 74 dbSNP
rs1444108677 76 dbSNP
rs1375703163 79 dbSNP
rs940849714 80 dbSNP
rs1188243611 81 dbSNP
rs1475665047 84 dbSNP
rs774179007 87 dbSNP
rs1333979667 88 dbSNP
rs1241429594 90 dbSNP
rs1339064404 90 dbSNP
rs1445078668 92 dbSNP
rs1036590692 96 dbSNP
rs766936175 100 dbSNP
rs1310640331 106 dbSNP
rs1264040078 108 dbSNP
rs1376741785 108 dbSNP
rs186249482 116 dbSNP
rs560626251 117 dbSNP
rs995587807 122 dbSNP
rs1048018815 150 dbSNP
rs1282520308 160 dbSNP
rs889446120 168 dbSNP
rs1006677707 174 dbSNP
rs1383961932 176 dbSNP
rs1337010021 184 dbSNP
rs1451414862 192 dbSNP
rs55988834 200 dbSNP
rs564720091 201 dbSNP
rs1276311288 203 dbSNP
rs1171838154 210 dbSNP
rs1410032014 218 dbSNP
rs1439335665 219 dbSNP
rs528789953 220 dbSNP
rs144208763 221 dbSNP
rs777376687 233 dbSNP
rs1243484939 235 dbSNP
rs1183227466 237 dbSNP
rs999339442 243 dbSNP
rs1031351581 244 dbSNP
rs1240247145 247 dbSNP
rs1205393761 250 dbSNP
rs1437284304 262 dbSNP
rs1271566227 265 dbSNP
rs1237506517 270 dbSNP
rs1437694093 286 dbSNP
rs1194988389 304 dbSNP
rs1377675889 316 dbSNP
rs1314723670 329 dbSNP
rs1244812331 331 dbSNP
rs1380202993 334 dbSNP
rs1465285989 335 dbSNP
rs562124471 350 dbSNP
rs1299490339 351 dbSNP
rs957949441 357 dbSNP
rs1353362747 360 dbSNP
rs1326805734 371 dbSNP
rs1426395843 392 dbSNP
rs989892333 396 dbSNP
rs1162758065 399 dbSNP
rs529015645 405 dbSNP
rs191894893 411 dbSNP
rs1177976989 413 dbSNP
rs969353674 419 dbSNP
rs1231210700 428 dbSNP
rs982190374 433 dbSNP
rs1490640801 435 dbSNP
rs1291679794 484 dbSNP
rs928033924 488 dbSNP
rs940875858 490 dbSNP
rs1332401335 495 dbSNP
rs1223953654 498 dbSNP
rs1371985344 508 dbSNP
rs568530728 511 dbSNP
rs1445167439 514 dbSNP
rs1305786553 523 dbSNP
rs1366188623 525 dbSNP
rs1331746320 533 dbSNP
rs539009260 546 dbSNP
rs1422569984 559 dbSNP
rs1346694585 560 dbSNP
rs972224744 564 dbSNP
rs112400352 570 dbSNP
rs920846775 571 dbSNP
rs1201741487 576 dbSNP
rs1480784384 577 dbSNP
rs1268878659 581 dbSNP
rs1197826088 585 dbSNP
rs551266768 589 dbSNP
rs1487058574 598 dbSNP
rs759957149 600 dbSNP
rs930949294 600 dbSNP
rs1216094836 603 dbSNP
rs757068851 607 dbSNP
rs1257148709 610 dbSNP
rs1051107984 627 dbSNP
rs1282576240 640 dbSNP
rs1402951191 642 dbSNP
rs889486841 644 dbSNP
rs1289178551 645 dbSNP
rs750411764 646 dbSNP
rs1432094531 650 dbSNP
rs942322744 663 dbSNP
rs566478145 664 dbSNP
rs1374455787 667 dbSNP
rs778731189 669 dbSNP
rs34318136 670 dbSNP
rs533836522 671 dbSNP
rs555571155 678 dbSNP
rs1477918496 679 dbSNP
rs1171875621 680 dbSNP
rs1040832167 683 dbSNP
rs1186340921 691 dbSNP
rs900896981 693 dbSNP
rs573726211 706 dbSNP
rs1030796605 712 dbSNP
rs893629469 713 dbSNP
rs879532014 714 dbSNP
rs1309234345 719 dbSNP
rs1296163529 727 dbSNP
rs1392001376 736 dbSNP
rs1359540742 737 dbSNP
rs1338954671 742 dbSNP
rs1453605084 744 dbSNP
rs1405470911 748 dbSNP
rs1174432862 750 dbSNP
rs1386298873 751 dbSNP
rs1321619199 755 dbSNP
rs1170343266 764 dbSNP
rs1023961725 775 dbSNP
rs1387394685 779 dbSNP
rs1185082630 785 dbSNP
rs35590239 790 dbSNP
rs1461449466 795 dbSNP
rs1242114675 797 dbSNP
rs1198266930 807 dbSNP
rs1481323281 813 dbSNP
rs1251835490 817 dbSNP
rs1226526406 824 dbSNP
rs1339845146 825 dbSNP
rs1316835336 829 dbSNP
rs969384869 830 dbSNP
rs982049849 836 dbSNP
rs535961088 837 dbSNP
rs1035074715 838 dbSNP
rs374902123 840 dbSNP
rs1315831721 841 dbSNP
rs867154068 853 dbSNP
rs181506348 888 dbSNP
rs1298108831 890 dbSNP
rs756225892 891 dbSNP
rs745798484 895 dbSNP
rs1387494052 902 dbSNP
rs962063572 903 dbSNP
rs148718168 905 dbSNP
rs771987767 906 dbSNP
rs1265972932 912 dbSNP
rs1420362927 913 dbSNP
rs1250571948 915 dbSNP
rs373708259 934 dbSNP
rs142308719 941 dbSNP
rs1263177791 946 dbSNP
rs1223036313 951 dbSNP
rs1358447699 952 dbSNP
rs986420552 978 dbSNP
rs56124997 983 dbSNP
rs1241368483 984 dbSNP
rs573611272 1001 dbSNP
rs1192469453 1013 dbSNP
rs1336460126 1021 dbSNP
rs540551540 1022 dbSNP
rs766454854 1024 dbSNP
rs1408053804 1026 dbSNP
rs1368045696 1035 dbSNP
rs562331973 1037 dbSNP
rs942358654 1039 dbSNP
rs1388948164 1041 dbSNP
rs1161132396 1046 dbSNP
rs1454980857 1046 dbSNP
rs529433297 1049 dbSNP
rs1363999316 1059 dbSNP
rs1180523982 1063 dbSNP
rs1471322367 1066 dbSNP
rs1199987227 1072 dbSNP
rs1477050219 1076 dbSNP
rs1490126499 1085 dbSNP
rs1287421118 1086 dbSNP
rs1167279258 1117 dbSNP
rs151283178 1124 dbSNP
rs1260328173 1141 dbSNP
rs1226719536 1142 dbSNP
rs1347449341 1143 dbSNP
rs376323893 1148 dbSNP
rs935136363 1151 dbSNP
rs1329738699 1165 dbSNP
rs1052607641 1175 dbSNP
rs1401621554 1176 dbSNP
rs1385310094 1184 dbSNP
rs893669320 1187 dbSNP
rs1011138099 1194 dbSNP
rs1430707961 1201 dbSNP
rs1177105755 1208 dbSNP
rs546213762 1209 dbSNP
rs1244887926 1212 dbSNP
rs1195108318 1215 dbSNP
rs1447357765 1219 dbSNP
rs1297823764 1222 dbSNP
rs1338632669 1225 dbSNP
rs1206992943 1226 dbSNP
rs1325799242 1229 dbSNP
rs1397583549 1231 dbSNP
rs1313106686 1234 dbSNP
rs748232978 1236 dbSNP
rs770179256 1244 dbSNP
rs1432005482 1252 dbSNP
rs532861231 1254 dbSNP
rs1003501578 1255 dbSNP
rs1432388659 1255 dbSNP
rs1321084731 1258 dbSNP
rs1035022743 1261 dbSNP
rs1336870943 1265 dbSNP
rs1413376069 1267 dbSNP
rs139670569 1268 dbSNP
rs1169564742 1270 dbSNP
rs1353798273 1271 dbSNP
rs1475624165 1277 dbSNP
rs773543353 1283 dbSNP
rs1215183008 1288 dbSNP
rs187652910 1304 dbSNP
rs1243945137 1305 dbSNP
rs1203190025 1317 dbSNP
rs1440761140 1332 dbSNP
rs1275739184 1358 dbSNP
rs1215602690 1364 dbSNP
rs1486421572 1364 dbSNP
rs566088103 1370 dbSNP
rs1257265613 1371 dbSNP
rs1423794946 1374 dbSNP
rs986673272 1377 dbSNP
rs1384593423 1378 dbSNP
rs758853140 1378 dbSNP
rs534116319 1388 dbSNP
rs144448790 1392 dbSNP
rs1356871899 1395 dbSNP
rs1420395561 1395 dbSNP
rs910817582 1399 dbSNP
rs567462227 1400 dbSNP
rs1467743292 1419 dbSNP
rs966247013 1430 dbSNP
rs1166528411 1432 dbSNP
rs538568988 1436 dbSNP
rs376893646 1461 dbSNP
rs1303258092 1463 dbSNP
rs1386158259 1463 dbSNP
rs1378150203 1465 dbSNP
rs1181443893 1487 dbSNP
rs1394291918 1493 dbSNP
rs556387665 1494 dbSNP
rs1377479119 1501 dbSNP
rs1437809278 1503 dbSNP
rs1273068625 1514 dbSNP
rs1225269893 1527 dbSNP
rs191958042 1541 dbSNP
rs1283214030 1542 dbSNP
rs1313630814 1544 dbSNP
rs1315324700 1545 dbSNP
rs1227313983 1562 dbSNP
rs1376376920 1567 dbSNP
rs934980016 1568 dbSNP
rs539923086 1573 dbSNP
rs1052216186 1580 dbSNP
rs558209244 1585 dbSNP
rs914951148 1597 dbSNP
rs1426333996 1606 dbSNP
rs946583709 1611 dbSNP
rs1164388059 1623 dbSNP
rs1403765691 1626 dbSNP
rs1257023584 1631 dbSNP
rs1177891334 1632 dbSNP
rs573128986 1636 dbSNP
rs1250317469 1645 dbSNP
rs1202149420 1649 dbSNP
rs1490615710 1652 dbSNP
rs1180422450 1658 dbSNP
rs1219799970 1659 dbSNP
rs1319600187 1671 dbSNP
rs767212799 1678 dbSNP
rs905031140 1685 dbSNP
rs1003449140 1688 dbSNP
rs1440802599 1700 dbSNP
rs1056296388 1703 dbSNP
rs182295781 1712 dbSNP
rs111632787 1715 dbSNP
rs1347242119 1740 dbSNP
rs1177056833 1752 dbSNP
rs1358736552 1754 dbSNP
rs1027750427 1757 dbSNP
rs1481020418 1762 dbSNP
rs1267238170 1764 dbSNP
rs1189911025 1765 dbSNP
rs771228635 1769 dbSNP
rs1464372446 1775 dbSNP
rs1243505803 1780 dbSNP
rs952195681 1795 dbSNP
rs1327900921 1798 dbSNP
rs1400983849 1803 dbSNP
rs1224790993 1806 dbSNP
rs774707031 1809 dbSNP
rs1445916441 1811 dbSNP
rs1017827280 1814 dbSNP
rs966194580 1821 dbSNP
rs1363737606 1827 dbSNP
rs924839920 1829 dbSNP
rs1434591641 1834 dbSNP
rs1386569142 1839 dbSNP
rs956418177 1848 dbSNP
rs988184225 1849 dbSNP
rs914999324 1852 dbSNP
rs1377619332 1866 dbSNP
rs1174510482 1885 dbSNP
rs759970360 1888 dbSNP
rs1044783566 1893 dbSNP
rs574182261 1921 dbSNP
rs1369083679 1942 dbSNP
rs569005358 1945 dbSNP
rs1245783312 1946 dbSNP
rs1056327104 1953 dbSNP
rs538023803 1953 dbSNP
rs935516909 1955 dbSNP
rs1202203834 1956 dbSNP
rs993518675 1960 dbSNP
rs1049494927 1964 dbSNP
rs887784818 1969 dbSNP
rs1007683898 1982 dbSNP
rs1458641798 1988 dbSNP
rs1453496177 1991 dbSNP
rs1401507835 1993 dbSNP
rs1301639804 1994 dbSNP
rs1463936742 2000 dbSNP
rs555136543 2001 dbSNP
rs1436816537 2006 dbSNP
rs753916238 2007 dbSNP
rs760159026 2009 dbSNP
rs544526995 2013 dbSNP
rs1448040070 2018 dbSNP
rs1184990081 2030 dbSNP
rs1388000935 2030 dbSNP
rs1479053145 2036 dbSNP
rs997662648 2049 dbSNP
rs1191788011 2060 dbSNP
rs1198681829 2066 dbSNP
rs1481602670 2067 dbSNP
rs1031942042 2071 dbSNP
rs1401658183 2082 dbSNP
rs956455468 2088 dbSNP
rs990414271 2091 dbSNP
rs146632729 2099 dbSNP
rs1022411681 2104 dbSNP
rs967726337 2117 dbSNP
rs1465093416 2123 dbSNP
rs980511592 2126 dbSNP
rs1428237680 2136 dbSNP
rs926349872 2139 dbSNP
rs1436597680 2146 dbSNP
rs185020229 2157 dbSNP
rs1184827044 2167 dbSNP
rs1367506054 2167 dbSNP
rs1365096496 2168 dbSNP
rs1252470834 2182 dbSNP
rs1181284045 2192 dbSNP
rs1220060489 2197 dbSNP
rs544683816 2200 dbSNP
rs1440152377 2203 dbSNP
rs1270718976 2211 dbSNP
rs1210191088 2216 dbSNP
rs991917034 2230 dbSNP
rs368765268 2237 dbSNP
rs1319025014 2242 dbSNP
rs1218337361 2245 dbSNP
rs1288274318 2247 dbSNP
rs1408493497 2248 dbSNP
rs1347799792 2252 dbSNP
rs1271528339 2253 dbSNP
rs763548423 2257 dbSNP
rs1386529908 2264 dbSNP
rs1389643626 2267 dbSNP
rs1222447999 2268 dbSNP
rs189582057 2276 dbSNP
rs1412015085 2280 dbSNP
rs1158364050 2282 dbSNP
rs1489935590 2284 dbSNP
rs1196101009 2290 dbSNP
rs1199394715 2291 dbSNP
rs1450805343 2298 dbSNP
rs141382311 2311 dbSNP
rs1477379873 2315 dbSNP
rs1168209519 2316 dbSNP
rs1226621719 2317 dbSNP
rs1415910633 2324 dbSNP
rs1053055413 2343 dbSNP
rs1326327294 2354 dbSNP
rs1405848495 2366 dbSNP
rs1275954720 2367 dbSNP
rs1163516401 2375 dbSNP
rs1329649437 2376 dbSNP
rs887806229 2378 dbSNP
rs1347594443 2380 dbSNP
rs1436770974 2381 dbSNP
rs943334265 2383 dbSNP
rs756867441 2385 dbSNP
rs1298433773 2389 dbSNP
rs1455183941 2389 dbSNP
rs55970475 2403 dbSNP
rs901899480 2404 dbSNP
rs1268751277 2413 dbSNP
rs1477576543 2421 dbSNP
rs997693626 2422 dbSNP
rs764955729 2425 dbSNP
rs567495558 2431 dbSNP
rs1247605433 2433 dbSNP
rs1206977097 2434 dbSNP
rs1279963207 2436 dbSNP
rs1462666979 2436 dbSNP
rs1200349445 2443 dbSNP
rs182535302 2445 dbSNP
rs1021858769 2446 dbSNP
rs1357366079 2448 dbSNP
rs1229559511 2459 dbSNP
rs968135703 2464 dbSNP
rs1432277521 2465 dbSNP
rs980374331 2474 dbSNP
rs1264197743 2478 dbSNP
rs1334782382 2483 dbSNP
rs1033395039 2491 dbSNP
rs1399947547 2494 dbSNP
rs144876515 2496 dbSNP
rs1449837570 2497 dbSNP
rs1389842894 2517 dbSNP
rs1186841311 2524 dbSNP
rs1190807979 2526 dbSNP
rs571443251 2529 dbSNP
rs1473836943 2533 dbSNP
rs991869654 2535 dbSNP
rs1473116838 2536 dbSNP
rs1181199413 2554 dbSNP
rs1383227710 2572 dbSNP
rs534257501 2573 dbSNP
rs1206393081 2586 dbSNP
rs1421005093 2589 dbSNP
rs940159826 2592 dbSNP
rs1359535714 2600 dbSNP
rs554211538 2614 dbSNP
rs577128423 2619 dbSNP
rs1316747036 2620 dbSNP
rs539963479 2621 dbSNP
rs1342624913 2626 dbSNP
rs1284325660 2628 dbSNP
rs373908967 2632 dbSNP
rs896038285 2635 dbSNP
rs949089754 2638 dbSNP
rs1381160648 2639 dbSNP
rs1309758245 2644 dbSNP
rs1430174957 2648 dbSNP
rs1242444954 2650 dbSNP
rs1166977804 2669 dbSNP
rs1407346796 2673 dbSNP
rs1286786342 2674 dbSNP
rs558250317 2676 dbSNP
rs1414762006 2685 dbSNP
rs35064478 2687 dbSNP
rs758333380 2690 dbSNP
rs929143392 2696 dbSNP
rs149038027 2698 dbSNP
rs563190169 2701 dbSNP
rs34936915 2704 dbSNP
rs1250003290 2707 dbSNP
rs1203598732 2711 dbSNP
rs1323181931 2716 dbSNP
rs1290138045 2726 dbSNP
rs1227296094 2729 dbSNP
rs533896574 2734 dbSNP
rs555730669 2738 dbSNP
rs748285892 2739 dbSNP
rs1410309960 2748 dbSNP
rs1001946523 2749 dbSNP
rs1032476302 2752 dbSNP
rs574293829 2755 dbSNP
rs564040566 2763 dbSNP
rs901932032 2767 dbSNP
rs576586841 2769 dbSNP
rs1403683660 2773 dbSNP
rs1009782242 2774 dbSNP
rs758775340 2778 dbSNP
rs542002236 2787 dbSNP
rs561920150 2787 dbSNP
rs891982048 2791 dbSNP
rs778203071 2793 dbSNP
rs117994700 2800 dbSNP
rs375389032 2806 dbSNP
rs1193348680 2808 dbSNP
rs1043714323 2809 dbSNP
rs1489002162 2810 dbSNP
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rs1226135943 5937 dbSNP
rs758559679 5941 dbSNP
rs1031690761 5950 dbSNP
rs1161912640 5951 dbSNP
rs1378534296 5952 dbSNP
rs866452689 5955 dbSNP
rs973980508 5964 dbSNP
rs919953597 5965 dbSNP
rs932622115 5976 dbSNP
rs1398013290 5984 dbSNP
rs780456262 5990 dbSNP
rs1458165568 5992 dbSNP
rs987575625 5994 dbSNP
rs910594954 5996 dbSNP
rs1421086220 6000 dbSNP
rs747370569 6007 dbSNP
rs1178083935 6023 dbSNP
rs912621286 6025 dbSNP
rs943585704 6026 dbSNP
rs944204831 6028 dbSNP
rs1454495615 6030 dbSNP
rs1336894184 6033 dbSNP
rs1488329590 6034 dbSNP
rs796203702 6036 dbSNP
rs1042599758 6040 dbSNP
rs1381407872 6044 dbSNP
rs973979129 6056 dbSNP
rs920880343 6057 dbSNP
rs1309429924 6065 dbSNP
rs1238722962 6066 dbSNP
rs1374583723 6067 dbSNP
rs1303271425 6070 dbSNP
rs902673513 6078 dbSNP
rs1389807381 6086 dbSNP
rs532046498 6087 dbSNP
rs1421813463 6089 dbSNP
rs1053942103 6090 dbSNP
rs1308727928 6097 dbSNP
rs537165366 6118 dbSNP
rs1012505867 6121 dbSNP
rs1023143632 6122 dbSNP
rs114331147 6123 dbSNP
rs1433079247 6136 dbSNP
rs1265787911 6140 dbSNP
rs1047936523 6143 dbSNP
rs1489076162 6145 dbSNP
rs908233339 6148 dbSNP
rs1286210682 6153 dbSNP
rs938308854 6155 dbSNP
rs1215302956 6160 dbSNP
rs1350802006 6161 dbSNP
rs1257223553 6175 dbSNP
rs1233933947 6183 dbSNP
rs1003035242 6190 dbSNP
rs142437404 6191 dbSNP
rs1401543836 6194 dbSNP
rs961186595 6211 dbSNP
rs1260481775 6216 dbSNP
rs1297767179 6218 dbSNP
rs1349238594 6236 dbSNP
rs894208229 6242 dbSNP
rs1404488004 6246 dbSNP
rs370113178 6246 dbSNP
rs763273608 6246 dbSNP
rs771939082 6246 dbSNP
rs1376373034 6248 dbSNP
rs80112971 6255 dbSNP
rs1478332011 6260 dbSNP
rs1043262513 6261 dbSNP
rs1491195269 6262 dbSNP
rs199718340 6262 dbSNP
rs904329327 6262 dbSNP
rs912550566 6262 dbSNP
rs199992254 6263 dbSNP
rs115316975 6264 dbSNP
rs1220261378 6265 dbSNP
rs1419868032 6268 dbSNP
rs574710683 6272 dbSNP
rs1031554719 6273 dbSNP
rs1398453495 6274 dbSNP
rs1158173648 6275 dbSNP
rs1208994484 6277 dbSNP
rs1342471085 6284 dbSNP
rs1361845421 6292 dbSNP
rs541736165 6296 dbSNP
rs1395462574 6316 dbSNP
rs1400736436 6317 dbSNP
rs562316418 6321 dbSNP
rs1053976304 6334 dbSNP
rs895366804 6345 dbSNP
rs1009307807 6349 dbSNP
rs78052558 6353 dbSNP
rs1449875392 6357 dbSNP
rs1299355449 6365 dbSNP
rs1187674948 6367 dbSNP
rs965140938 6375 dbSNP
rs1044108934 6376 dbSNP
rs1253434708 6382 dbSNP
rs1458151791 6386 dbSNP
rs906856347 6386 dbSNP
rs1002655035 6395 dbSNP
rs1250923711 6401 dbSNP
rs543517428 6409 dbSNP
rs1216504520 6411 dbSNP
rs564989246 6423 dbSNP
rs920775123 6424 dbSNP
rs897011106 6426 dbSNP
rs769376244 6427 dbSNP
rs1333411922 6436 dbSNP
rs1448254991 6442 dbSNP
rs1400198348 6453 dbSNP
rs1329748427 6456 dbSNP
rs772527796 6460 dbSNP
rs532499040 6471 dbSNP
rs928185832 6474 dbSNP
rs1415535537 6483 dbSNP
rs1163531268 6491 dbSNP
rs1026912802 6493 dbSNP
rs1382921642 6495 dbSNP
rs1179954910 6498 dbSNP
rs1327540138 6501 dbSNP
rs188425620 6504 dbSNP
rs938384171 6512 dbSNP
rs1237424690 6516 dbSNP
rs140686147 6518 dbSNP
rs1290305763 6533 dbSNP
rs530451916 6550 dbSNP
rs1019638054 6551 dbSNP
rs1240895825 6554 dbSNP
rs915685609 6557 dbSNP
rs965738174 6561 dbSNP
rs1307643926 6568 dbSNP
rs548872732 6570 dbSNP
rs770690375 6580 dbSNP
rs1350873555 6582 dbSNP
rs1042790378 6584 dbSNP
rs1323301967 6588 dbSNP
rs1404455578 6590 dbSNP
rs904360406 6592 dbSNP
rs1159934001 6594 dbSNP
rs774350634 6609 dbSNP
rs998654712 6621 dbSNP
rs112420906 6622 dbSNP
rs759387024 6624 dbSNP
rs552799404 6626 dbSNP
rs1018011555 6627 dbSNP
rs964711875 6632 dbSNP
rs1199830410 6651 dbSNP
rs1217464073 6656 dbSNP
rs1353138259 6668 dbSNP
rs752714842 6673 dbSNP
rs995347369 6684 dbSNP
rs1027654209 6685 dbSNP
rs1368895310 6698 dbSNP
rs950890727 6708 dbSNP
rs1274641954 6714 dbSNP
rs938325793 6719 dbSNP
rs983575284 6720 dbSNP
rs1299601433 6724 dbSNP
rs1171976403 6730 dbSNP
rs1354611316 6739 dbSNP
rs1359390745 6764 dbSNP
rs1156314715 6768 dbSNP
rs1416165152 6774 dbSNP
rs1460988547 6777 dbSNP
rs1425717407 6779 dbSNP
rs1296110056 6780 dbSNP
rs1479304470 6781 dbSNP
rs1265028783 6786 dbSNP
rs1194700437 6789 dbSNP
rs1488081283 6799 dbSNP
rs928259299 6801 dbSNP
rs1212258376 6803 dbSNP
rs760465280 6803 dbSNP
rs1346953862 6805 dbSNP
rs147795869 6812 dbSNP
rs1278484578 6821 dbSNP
rs1222093044 6825 dbSNP
rs1320508556 6827 dbSNP
rs995251292 6828 dbSNP
rs1339435918 6840 dbSNP
rs1400302851 6840 dbSNP
rs548463102 6840 dbSNP
rs1026852715 6847 dbSNP
rs192032640 6848 dbSNP
rs183390457 6851 dbSNP
rs1359706255 6852 dbSNP
rs187736890 6864 dbSNP
rs750457514 6865 dbSNP
rs1006829394 6868 dbSNP
rs535754834 6873 dbSNP
rs978516006 6874 dbSNP
rs1298286379 6883 dbSNP
rs758687142 6891 dbSNP
rs1419902023 6893 dbSNP
rs1183701747 6894 dbSNP
rs1483592063 6895 dbSNP
rs925684632 6900 dbSNP
rs1202370741 6906 dbSNP
rs934522440 6907 dbSNP
rs1218347308 6910 dbSNP
rs568302421 6912 dbSNP
rs1306570291 6923 dbSNP
rs1301744284 6926 dbSNP
rs576756634 6926 dbSNP
rs1450429526 6931 dbSNP
rs191592326 6932 dbSNP
rs890407839 6941 dbSNP
rs1464871910 6944 dbSNP
rs574914943 6947 dbSNP
rs114593546 6950 dbSNP
rs751968781 6955 dbSNP
rs1267902373 6958 dbSNP
rs1413250438 6962 dbSNP
rs184346245 6968 dbSNP
rs1181814624 6971 dbSNP
rs994812407 6972 dbSNP
rs1188213510 6976 dbSNP
rs1239254338 6979 dbSNP
rs1198450867 6980 dbSNP
rs1420075066 6981 dbSNP
rs1427432918 6984 dbSNP
rs1479836013 6993 dbSNP
rs1267570611 6998 dbSNP
rs1223397110 7001 dbSNP
rs1027729438 7027 dbSNP
rs1321931951 7030 dbSNP
rs1313749130 7031 dbSNP
rs1167655807 7034 dbSNP
rs1367101275 7038 dbSNP
rs886522438 7044 dbSNP
rs1304197862 7046 dbSNP
rs1005031121 7052 dbSNP
rs1309823994 7053 dbSNP
rs1035136658 7055 dbSNP
rs1370962401 7058 dbSNP
rs969942087 7060 dbSNP
rs960882917 7062 dbSNP
rs928180026 7065 dbSNP
rs1272452824 7067 dbSNP
rs1421550645 7084 dbSNP
rs1381502162 7089 dbSNP
rs1178607992 7090 dbSNP
rs991483421 7094 dbSNP
rs769320917 7097 dbSNP
rs1417845552 7098 dbSNP
rs938370446 7103 dbSNP
rs1192075540 7110 dbSNP
rs547937386 7115 dbSNP
rs1037066721 7118 dbSNP
rs1023855765 7121 dbSNP
rs918246525 7123 dbSNP
rs755356646 7133 dbSNP
rs1355288397 7137 dbSNP
rs1286073121 7142 dbSNP
rs978423093 7143 dbSNP
rs757765674 7144 dbSNP
rs1333895599 7145 dbSNP
rs1361935903 7149 dbSNP
rs1048152082 7151 dbSNP
rs1387075105 7152 dbSNP
rs925718812 7159 dbSNP
rs1301476405 7160 dbSNP
rs781369937 7164 dbSNP
rs1007107566 7167 dbSNP
rs1040974612 7174 dbSNP
rs1452275260 7177 dbSNP
rs1449672739 7179 dbSNP
rs541146604 7179 dbSNP
rs1177289035 7180 dbSNP
rs901044808 7180 dbSNP
rs999445589 7187 dbSNP
rs1267183759 7201 dbSNP
rs1217621494 7208 dbSNP
rs1242669745 7210 dbSNP
rs1263345791 7215 dbSNP
rs1203979019 7217 dbSNP
rs1184180131 7221 dbSNP
rs1348466309 7224 dbSNP
rs1257654663 7231 dbSNP
rs748691044 7245 dbSNP
rs1030997239 7246 dbSNP
rs1485488789 7248 dbSNP
rs1281133262 7250 dbSNP
rs1220752771 7251 dbSNP
rs1186186697 7253 dbSNP
rs770139410 7263 dbSNP
rs1341293043 7268 dbSNP
rs1317728181 7278 dbSNP
rs1380562615 7292 dbSNP
rs372666316 7293 dbSNP
rs1444637960 7301 dbSNP
rs1162551418 7303 dbSNP
rs1303981013 7305 dbSNP
rs189961288 7311 dbSNP
rs958019226 7313 dbSNP
rs988533029 7320 dbSNP
rs1478606041 7325 dbSNP
rs911731296 7326 dbSNP
rs1423813548 7328 dbSNP
rs1409925368 7334 dbSNP
rs1320654296 7341 dbSNP
rs1346359527 7343 dbSNP
rs1191891359 7346 dbSNP
rs1444734202 7348 dbSNP
rs574708000 7351 dbSNP
rs1430629417 7352 dbSNP
rs1460804541 7358 dbSNP
rs777395771 7359 dbSNP
rs1261035798 7363 dbSNP
rs73557063 7367 dbSNP
rs1318908068 7388 dbSNP
rs73557064 7396 dbSNP
rs930677760 7405 dbSNP
rs1049033444 7406 dbSNP
rs886553335 7417 dbSNP
rs1004934516 7426 dbSNP
rs1404469525 7438 dbSNP
rs115430777 7440 dbSNP
rs1466435632 7441 dbSNP
rs1225297930 7444 dbSNP
rs552837955 7450 dbSNP
rs1284673949 7451 dbSNP
rs768077126 7451 dbSNP
rs1316333242 7454 dbSNP
rs564500451 7461 dbSNP
rs1369751628 7463 dbSNP
rs972294202 7464 dbSNP
rs918277561 7473 dbSNP
rs539513099 7474 dbSNP
rs910927085 7476 dbSNP
rs1012408552 7479 dbSNP
rs1271981877 7481 dbSNP
rs942550443 7484 dbSNP
rs546342003 7487 dbSNP
rs1235420510 7495 dbSNP
rs1024347463 7496 dbSNP
rs1470945741 7508 dbSNP
rs568055462 7509 dbSNP
rs935274383 7514 dbSNP
rs1335590210 7518 dbSNP
rs1409168600 7519 dbSNP
rs774174080 7520 dbSNP
rs1157611671 7522 dbSNP
rs535036186 7523 dbSNP
rs893827027 7529 dbSNP
rs1010836154 7536 dbSNP
rs550155874 7538 dbSNP
rs988560810 7549 dbSNP
rs911610696 7550 dbSNP
rs745480979 7558 dbSNP
rs556525609 7559 dbSNP
rs1179328932 7562 dbSNP
rs775091855 7577 dbSNP
rs1453547122 7582 dbSNP
rs921868341 7583 dbSNP
rs1003629371 7586 dbSNP
rs539333605 7589 dbSNP
rs1357440977 7596 dbSNP
rs763933913 7597 dbSNP
rs1338982038 7605 dbSNP
rs1048936279 7611 dbSNP
rs1350511491 7623 dbSNP
rs569912606 7624 dbSNP
rs1280287672 7632 dbSNP
rs1293338529 7635 dbSNP
rs1332481026 7638 dbSNP
rs1035625567 7648 dbSNP
rs962215671 7650 dbSNP
rs940663099 7654 dbSNP
rs1056985306 7655 dbSNP
rs1159915787 7668 dbSNP
rs535789030 7674 dbSNP
rs1226293135 7680 dbSNP
rs1407077706 7681 dbSNP
rs1012854794 7683 dbSNP
rs796384008 7696 dbSNP
rs1264962023 7701 dbSNP
rs1045224663 7702 dbSNP
rs572923038 7707 dbSNP
rs1199027276 7714 dbSNP
rs952365584 7719 dbSNP
rs1392781219 7728 dbSNP
rs1202538616 7729 dbSNP
rs1265508381 7730 dbSNP
rs1216502320 7732 dbSNP
rs1446960989 7744 dbSNP
rs535135106 7751 dbSNP
rs983748169 7754 dbSNP
rs1221411541 7756 dbSNP
rs1275882143 7765 dbSNP
rs1001136922 7767 dbSNP
rs1222585475 7767 dbSNP
rs1031218113 7771 dbSNP
rs910886645 7774 dbSNP
rs553152409 7775 dbSNP
rs976516960 7776 dbSNP
rs922452130 7777 dbSNP
rs1175431168 7789 dbSNP
rs73557066 7795 dbSNP
rs1187206187 7817 dbSNP
rs1240398202 7818 dbSNP
rs192662257 7818 dbSNP
rs1180425156 7829 dbSNP
rs1212937705 7843 dbSNP
rs563656140 7847 dbSNP
rs572333350 7862 dbSNP
rs1202095194 7866 dbSNP
rs1172130161 7894 dbSNP
rs1279645730 7900 dbSNP
rs1214775096 7905 dbSNP
rs1400161574 7906 dbSNP
rs965805211 7909 dbSNP
rs1360715477 7910 dbSNP
rs1267894791 7913 dbSNP
rs975010989 7926 dbSNP
rs1329814616 7935 dbSNP
rs921800224 7945 dbSNP
rs755125578 7962 dbSNP
rs1407809402 7969 dbSNP
rs1467989452 7980 dbSNP
rs1402168107 7983 dbSNP
rs905178120 7996 dbSNP
rs1428136343 8002 dbSNP
rs1284933258 8008 dbSNP
rs1183614973 8014 dbSNP
rs1004058456 8025 dbSNP
rs1305782609 8027 dbSNP
rs1445769086 8040 dbSNP
rs1346136700 8052 dbSNP
rs984681188 8060 dbSNP
rs1182157863 8062 dbSNP
rs1035085017 8065 dbSNP
rs897998181 8068 dbSNP
rs1272935837 8069 dbSNP
rs907790355 8072 dbSNP
rs752055126 8082 dbSNP
rs576035795 8097 dbSNP
rs544990534 8107 dbSNP
rs1314352552 8111 dbSNP
rs546491086 8112 dbSNP
rs1378921638 8115 dbSNP
rs918025582 8121 dbSNP
rs1461683480 8126 dbSNP
rs1349411376 8134 dbSNP
rs948178476 8135 dbSNP
rs141188091 8151 dbSNP
rs146958317 8152 dbSNP
rs558036322 8153 dbSNP
rs1052720241 8168 dbSNP
rs1251767950 8175 dbSNP
rs1176931269 8180 dbSNP
rs963730640 8186 dbSNP
rs1198789667 8187 dbSNP
rs1359580883 8188 dbSNP
rs1376376509 8205 dbSNP
rs892717773 8206 dbSNP
rs1476449302 8209 dbSNP
rs184746910 8210 dbSNP
rs1307446162 8230 dbSNP
rs1018599301 8231 dbSNP
rs561676530 8235 dbSNP
rs1305241556 8247 dbSNP
rs773129821 8250 dbSNP
rs1405747632 8256 dbSNP
rs189025568 8273 dbSNP
rs1161734942 8279 dbSNP
rs550196939 8283 dbSNP
rs1029126008 8290 dbSNP
rs1364816432 8297 dbSNP
rs181394017 8299 dbSNP
rs186425351 8300 dbSNP
rs984586158 8312 dbSNP
rs915075016 8316 dbSNP
rs1427658415 8322 dbSNP
rs375018469 8324 dbSNP
rs1490407299 8326 dbSNP
rs1385958039 8327 dbSNP
rs961924435 8332 dbSNP
rs1219535902 8354 dbSNP
rs1486824540 8357 dbSNP
rs545532784 8357 dbSNP
rs1238216098 8369 dbSNP
rs992458337 8371 dbSNP
rs917944554 8374 dbSNP
rs1284955688 8376 dbSNP
rs551353372 8378 dbSNP
rs948012364 8380 dbSNP
rs566669604 8381 dbSNP
rs926633654 8383 dbSNP
rs1301382761 8398 dbSNP
rs1383960977 8400 dbSNP
rs1385730159 8401 dbSNP
rs1288833720 8411 dbSNP
rs939335970 8413 dbSNP
rs1056957741 8417 dbSNP
rs533703197 8420 dbSNP
rs1428115009 8423 dbSNP
rs555536231 8427 dbSNP
rs1261778104 8436 dbSNP
rs1049290862 8447 dbSNP
rs1484847083 8453 dbSNP
rs189307615 8482 dbSNP
rs535930889 8483 dbSNP
rs892750649 8487 dbSNP
rs1281667590 8493 dbSNP
rs944315333 8496 dbSNP
rs1327167289 8505 dbSNP
rs1449212705 8505 dbSNP
rs879486146 8505 dbSNP
rs557412242 8509 dbSNP
rs997828030 8514 dbSNP
rs901511969 8515 dbSNP
rs760455064 8527 dbSNP
rs1337837725 8539 dbSNP
rs1389625767 8546 dbSNP
rs1404336448 8546 dbSNP
rs1170489986 8556 dbSNP
rs1463196715 8564 dbSNP
rs1447663645 8567 dbSNP
rs1373207573 8575 dbSNP
rs1165717166 8579 dbSNP
rs868314226 8582 dbSNP
rs1244854911 8586 dbSNP
rs1184000969 8603 dbSNP
rs1460733616 8605 dbSNP
rs1029832062 8608 dbSNP
rs1261013973 8608 dbSNP
rs75562451 8609 dbSNP
rs1250832820 8613 dbSNP
rs1225282757 8622 dbSNP
rs1385647087 8644 dbSNP
rs867124190 8647 dbSNP
rs1452508708 8652 dbSNP
rs887511545 8655 dbSNP
rs915097986 8658 dbSNP
rs1006039216 8661 dbSNP
rs1331277650 8666 dbSNP
rs967830528 8675 dbSNP
rs541104467 8676 dbSNP
rs1014724747 8677 dbSNP
rs1427213853 8678 dbSNP
rs1386523224 8685 dbSNP
rs1164205160 8694 dbSNP
rs939350446 8696 dbSNP
rs542471452 8705 dbSNP
rs778502709 8711 dbSNP
rs992094205 8716 dbSNP
rs1025279655 8717 dbSNP
rs1362413831 8729 dbSNP
rs181006408 8731 dbSNP
rs1235534022 8740 dbSNP
rs1454069195 8742 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aggacuggggAUCUGGGUUGAc 5'
                    ||  ||::||| 
Target 5' ---------aUACUCCUGACUg 3'
 		1 - 13
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000344641.3 | 3UTR | AUACUCCUGACUGACCAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
40 hsa-miR-4259 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074403 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT082380 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 6
MIRT224489 NDRG1 N-myc downstream regulated 1 2 2
MIRT227807 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT293253 DR1 down-regulator of transcription 1 2 2
MIRT455060 MEN1 menin 1 2 2
MIRT459206 RCE1 Ras converting CAAX endopeptidase 1 2 2
MIRT464866 UBB ubiquitin B 2 8
MIRT464897 UBALD1 UBA like domain containing 1 2 2
MIRT467210 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT467749 SLC36A1 solute carrier family 36 member 1 2 2
MIRT470565 POU2F1 POU class 2 homeobox 1 2 2
MIRT473523 MAX MYC associated factor X 2 2
MIRT474955 KCTD10 potassium channel tetramerization domain containing 10 2 4
MIRT478575 CTNND1 catenin delta 1 2 2
MIRT479952 CBX4 chromobox 4 2 6
MIRT486151 SIX5 SIX homeobox 5 2 6
MIRT488836 MRRF mitochondrial ribosome recycling factor 2 2
MIRT489466 MSC musculin 2 2
MIRT498922 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT501166 SLC10A7 solute carrier family 10 member 7 2 6
MIRT504195 FAM127B retrotransposon Gag like 8A 2 2
MIRT507342 FAM168A family with sequence similarity 168 member A 2 2
MIRT512629 GPX1 glutathione peroxidase 1 2 4
MIRT514365 UBBP4 ubiquitin B pseudogene 4 2 6
MIRT523321 H3F3B H3 histone family member 3B 2 2
MIRT529793 AP4S1 adaptor related protein complex 4 sigma 1 subunit 2 2
MIRT544301 TSPYL1 TSPY like 1 2 2
MIRT552985 VAT1 vesicle amine transport 1 2 2
MIRT562785 LIMA1 LIM domain and actin binding 1 2 2
MIRT653090 SSR3 signal sequence receptor subunit 3 2 2
MIRT661985 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 4
MIRT666982 PHAX phosphorylated adaptor for RNA export 2 2
MIRT683255 WFDC6 WAP four-disulfide core domain 6 2 2
MIRT684051 FOLR1 folate receptor 1 2 2
MIRT686137 B4GALT7 beta-1,4-galactosyltransferase 7 2 2
MIRT688435 DNAL1 dynein axonemal light chain 1 2 2
MIRT698391 TMED2 transmembrane p24 trafficking protein 2 2 2
MIRT698819 STK38 serine/threonine kinase 38 2 2
MIRT715754 HSD11B1L hydroxysteroid 11-beta dehydrogenase 1 like 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4259 Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4259 Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PATU8988)
hsa-miR-4259 Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4259 Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-4259 Temozolomide 5394 NSC362856 approved resistant High Glioblastoma cell line (U251)
hsa-mir-4259 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4259 Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-4259 Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-4259 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4259 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4259 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-4259 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4259 Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)

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