pre-miRNA Information
pre-miRNA hsa-mir-605   
Genomic Coordinates chr10: 51299573 - 51299655
Synonyms MIRN605, hsa-mir-605, MIR605
Description Homo sapiens miR-605 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-605-3p
Sequence 51| AGAAGGCACUAUGAGAUUUAGA |72
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 10 + 51299626 27587585, 28550310, 26028588, 26449202, 26487287, 29165639 MiREDiBase
A-to-I 14 10 + 51299636 29233923 MiREDiBase
A-to-I 20 10 + 51299642 18684997, 26449202, 27587585, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs759219082 5 dbSNP
rs1491224174 9 dbSNP
rs746611214 10 dbSNP
rs367648737 11 dbSNP
rs1359467239 14 dbSNP
rs1442565019 16 dbSNP
Putative Targets

Gene Information
Gene Symbol STARD3   
Synonyms CAB1, MLN64, es64
Description StAR related lipid transfer domain containing 3
Transcript NM_001165937   
Other Transcripts NM_001165938 , NM_006804   
Expression
Putative miRNA Targets on STARD3
3'UTR of STARD3
(miRNA target sites are highlighted)
>STARD3|NM_001165937|3'UTR
   1 CTGTGCCCCCTCCCACCCTGCGGGCCAGGGTCCTGTCGCCACCACTTCCAGAGCCAGAAAGGGTGCCAGTTGGGCTCGCA
  81 CTGCCCACATGGGACCTGGCCCCAGGCTGTCACCCTCCACCGAGCCACGCAGTGCCTGGAGTTGACTGACTGAGCAGGCT
 161 GTGGGGTGGAGCACTGGACTCCGGGGCCCCACTGGCTGGAGGAAGTGGGGTCTGGCCTGTTGATGTTTACATGGCGCCCT
 241 GCCTCCTGGAGGACCAGATTGCTCTGCCCCACCTTGCCAGGGCAGGGTCTGGGCTGGGCACCTGACTTGGCTGGGGAGGA
 321 CCAGGGCCCTGGGCAGGGCAGGGCAGCCTGTCACCCGTGTGAAGATGAAGGGGCTCTTCATCTGCCTGCGCTCTCGTCGG
 401 TTTTTTTAGGATTATTGAAAGAGTCTGGGACCCTTGTTGGGGAGTGGGTGGCAGGTGGGGGTGGGCTGCTGGCCATGAAT
 481 CTCTGCCTCTCCCAGGCTGTCCCCCTCCTCCCAGGGCCTCCTGGGGGACCTTTGTATTAAGCCAATTAAAAACATGAATT
 561 TAAAAAAAAAAAAAAATTCCAGCCCCTCCCACTGCCTTGCCTCTTGAGGGAAGAGAAAGGCAGGCAGCAGCTTGGATGAA
 641 GAGGGAAGACCCCTCACACAGCCTCTCCTGGGCTCACAGGAGGGCGGAGCCCGGGGAGCCAGTTCCTGAAACATGCCCCC
 721 CATTCCCCCCCCGCCCACCCCCCACTCCCCGCTTTCCTGACCAGTTCAACTGAGCAGATGACTGGTCAGAAAAAAATGCC
 801 CCGCCCCCTGCCAGGCTTCAGCGGGGCAAGTTTAAAGTCTCTAGTCCAGGAATGGAGGTGGGGGTATGGGCACCTGGCAG
 881 TGCCCACAGCAAGCCTTGACTGTGTGGCCTGGAGATGGGGCCTGAGCTTCAGGGTCACTGAGGCACCTCTGGGATCCAGG
 961 CCACCTGGAGCCCCGGACCTCCCAGACTCCACTCACCCATTCCCTCTCCCCGCACGGCACTCACACCAGGGGCGGCCTGG
1041 AGCCCGGATCGCAGGGCGGGGCCAGGCCACTGCCTGCCTTCCTCCTCCCTCCCGGCTGGCCTGCCCCCTTGCCTGCCTGC
1121 ATGCAGGCTTCCAGCAGAGCCAGCTTCTTCAGAGCCAGGTGGATCCTGTTTCGGTCCTGCCTAGGTGTGTGACCCTGGGC
1201 GAATCTACCTCTCTCAGCTTCTGCTTCCCACTTTATGAAAATGGGACTGATGTCACAGGGTTGTTATGAGATTAAAAGAT
1281 ATGAAGAACCGGG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agauuuagaguaucACGGAAGa 5'
                        ||||||| 
Target 5' gccaggccactgccTGCCTTCc 3'
1061 - 1082 140.00 -10.90
2
miRNA  3' agauuuaGAGUAUCACGGAAga 5'
                 |||  | ||||||  
Target 5' ccagcccCTCCCACTGCCTTgc 3'
579 - 600 131.00 -8.40
3
miRNA  3' agAUUUAGAGUAUCACGGA-AGa 5'
            |:||||||    ||||| || 
Target 5' caTGAATCTC----TGCCTCTCc 3'
474 - 492 130.00 -13.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26997175 22 COSMIC
COSN26997183 39 COSMIC
COSN31975267 49 COSMIC
COSN16131089 58 COSMIC
COSN13717784 61 COSMIC
COSN30491449 73 COSMIC
COSN30480046 78 COSMIC
COSN32054001 79 COSMIC
COSN18715884 112 COSMIC
COSN20073354 112 COSMIC
COSN4892835 153 COSMIC
COSN28855876 155 COSMIC
COSN1196400 180 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1342938680 3 dbSNP
rs1459060049 4 dbSNP
rs1293780316 5 dbSNP
rs1390402785 7 dbSNP
rs1385430340 8 dbSNP
rs1290637145 9 dbSNP
rs779397071 10 dbSNP
rs753144357 13 dbSNP
rs1286473719 15 dbSNP
rs371137052 22 dbSNP
rs111294298 23 dbSNP
rs747232589 34 dbSNP
rs771157937 38 dbSNP
rs745979354 39 dbSNP
rs952879641 42 dbSNP
rs1253779293 44 dbSNP
rs192495661 45 dbSNP
rs1181368779 47 dbSNP
rs1405110548 49 dbSNP
rs371191084 51 dbSNP
rs1015611445 52 dbSNP
rs1157308111 55 dbSNP
rs961471636 60 dbSNP
rs528415391 61 dbSNP
rs1280431875 64 dbSNP
rs928010724 65 dbSNP
rs546448589 70 dbSNP
rs760293654 77 dbSNP
rs766086651 78 dbSNP
rs558297016 79 dbSNP
rs2934961 81 dbSNP
rs1242413955 82 dbSNP
rs1377740224 85 dbSNP
rs764711188 93 dbSNP
rs753267216 97 dbSNP
rs758869145 101 dbSNP
rs551097184 103 dbSNP
rs751971450 107 dbSNP
rs757526026 109 dbSNP
rs781485473 113 dbSNP
rs1379382157 116 dbSNP
rs746032564 122 dbSNP
rs770058882 123 dbSNP
rs780279110 129 dbSNP
rs748138666 130 dbSNP
rs1387641372 132 dbSNP
rs569418909 139 dbSNP
rs780936181 143 dbSNP
rs1391129695 145 dbSNP
rs772974841 148 dbSNP
rs1471789934 153 dbSNP
rs769545611 163 dbSNP
rs753799258 164 dbSNP
rs760521585 167 dbSNP
rs1449490294 168 dbSNP
rs1188018044 173 dbSNP
rs15968 175 dbSNP
rs776321044 183 dbSNP
rs558215495 184 dbSNP
rs774955845 185 dbSNP
rs762397645 186 dbSNP
rs764697151 187 dbSNP
rs1208124016 201 dbSNP
rs996927431 210 dbSNP
rs1049983577 225 dbSNP
rs1325031596 226 dbSNP
rs1054057419 229 dbSNP
rs573434877 235 dbSNP
rs780449382 236 dbSNP
rs534525076 237 dbSNP
rs1015750375 253 dbSNP
rs531705954 255 dbSNP
rs139905785 263 dbSNP
rs1474995330 263 dbSNP
rs1260737816 264 dbSNP
rs1159541955 269 dbSNP
rs1382108703 272 dbSNP
rs1488752399 273 dbSNP
rs1268376955 274 dbSNP
rs1003546164 281 dbSNP
rs1323575875 283 dbSNP
rs544453062 288 dbSNP
rs11556623 290 dbSNP
rs1291293696 291 dbSNP
rs959373584 295 dbSNP
rs1050293 297 dbSNP
rs1007378888 299 dbSNP
rs1374875192 302 dbSNP
rs1340762881 303 dbSNP
rs1017878184 322 dbSNP
rs963260198 324 dbSNP
rs1351104648 325 dbSNP
rs1165460056 331 dbSNP
rs1409269846 334 dbSNP
rs1304853013 339 dbSNP
rs144341371 347 dbSNP
rs1391239084 355 dbSNP
rs968656082 357 dbSNP
rs116500012 358 dbSNP
rs951358222 367 dbSNP
rs1489532929 372 dbSNP
rs1232694886 374 dbSNP
rs982815361 376 dbSNP
rs924400325 390 dbSNP
rs756230031 391 dbSNP
rs976466793 392 dbSNP
rs564132200 396 dbSNP
rs528340131 397 dbSNP
rs1369156378 399 dbSNP
rs1049888358 400 dbSNP
rs747845057 401 dbSNP
rs888698301 401 dbSNP
rs1333277032 412 dbSNP
rs1465998045 417 dbSNP
rs1174268995 418 dbSNP
rs1405049959 418 dbSNP
rs1435157386 420 dbSNP
rs1426070162 421 dbSNP
rs1176707892 425 dbSNP
rs1437837789 431 dbSNP
rs926757908 433 dbSNP
rs1199810058 437 dbSNP
rs540528743 446 dbSNP
rs936865215 448 dbSNP
rs1480072019 458 dbSNP
rs941657414 459 dbSNP
rs1301453660 465 dbSNP
rs1238878908 467 dbSNP
rs1373995201 477 dbSNP
rs990102056 478 dbSNP
rs1050321 482 dbSNP
rs1447381752 483 dbSNP
rs914196802 490 dbSNP
rs561684636 492 dbSNP
rs1467333706 496 dbSNP
rs1452526390 507 dbSNP
rs1192986520 510 dbSNP
rs1395581012 512 dbSNP
rs1382226655 514 dbSNP
rs1415178494 517 dbSNP
rs1179863704 519 dbSNP
rs1444594828 522 dbSNP
rs1802512 525 dbSNP
rs1183969700 528 dbSNP
rs1178311164 533 dbSNP
rs370725001 541 dbSNP
rs1051408483 552 dbSNP
rs1461615306 559 dbSNP
rs1240174935 562 dbSNP
rs1287577073 562 dbSNP
rs397857339 562 dbSNP
rs550012442 563 dbSNP
rs1397635271 575 dbSNP
rs1379612245 579 dbSNP
rs890186240 583 dbSNP
rs897298075 583 dbSNP
rs1398350803 584 dbSNP
rs1003680419 589 dbSNP
rs1303399109 591 dbSNP
rs1368894391 600 dbSNP
rs1457422206 601 dbSNP
rs1367303064 605 dbSNP
rs1220463103 606 dbSNP
rs1035088090 612 dbSNP
rs769080835 615 dbSNP
rs898959733 618 dbSNP
rs1012238051 630 dbSNP
rs1264806890 632 dbSNP
rs1216706563 636 dbSNP
rs1355037042 642 dbSNP
rs1263674560 644 dbSNP
rs1022756263 651 dbSNP
rs1322151370 655 dbSNP
rs190057632 659 dbSNP
rs1259562750 660 dbSNP
rs886384150 663 dbSNP
rs145241630 668 dbSNP
rs1024955539 671 dbSNP
rs978640646 673 dbSNP
rs1388641411 674 dbSNP
rs1295842632 678 dbSNP
rs1031605660 679 dbSNP
rs569354848 680 dbSNP
rs1478967080 684 dbSNP
rs866905721 686 dbSNP
rs977012921 687 dbSNP
rs922362392 688 dbSNP
rs1450593980 692 dbSNP
rs958447688 693 dbSNP
rs989701393 694 dbSNP
rs1171722379 696 dbSNP
rs932424850 697 dbSNP
rs533491079 700 dbSNP
rs1402717503 709 dbSNP
rs115929562 713 dbSNP
rs181036831 715 dbSNP
rs1350977157 716 dbSNP
rs987702061 716 dbSNP
rs1279133467 717 dbSNP
rs1439171398 722 dbSNP
rs1034027601 723 dbSNP
rs1329521455 724 dbSNP
rs1400215781 725 dbSNP
rs144813441 725 dbSNP
rs1360722729 726 dbSNP
rs1329899764 727 dbSNP
rs1467569615 728 dbSNP
rs1218675629 731 dbSNP
rs1168183579 733 dbSNP
rs1477511897 733 dbSNP
rs962417418 734 dbSNP
rs1196650017 738 dbSNP
rs973891470 738 dbSNP
rs1232472941 741 dbSNP
rs1290246853 743 dbSNP
rs534183321 744 dbSNP
rs1453290702 745 dbSNP
rs1248955949 747 dbSNP
rs1234137289 749 dbSNP
rs943058631 750 dbSNP
rs1039154603 751 dbSNP
rs1241429309 752 dbSNP
rs1182182343 753 dbSNP
rs1488040895 754 dbSNP
rs1194456153 755 dbSNP
rs1426063693 756 dbSNP
rs1378250728 759 dbSNP
rs898948430 770 dbSNP
rs1474309174 776 dbSNP
rs1399618265 780 dbSNP
rs930458808 783 dbSNP
rs562992011 790 dbSNP
rs1379117635 793 dbSNP
rs909502620 795 dbSNP
rs1414911693 803 dbSNP
rs1233325798 804 dbSNP
rs941041434 805 dbSNP
rs762175286 808 dbSNP
rs1316890843 812 dbSNP
rs1345111560 822 dbSNP
rs1014149616 823 dbSNP
rs1045684297 824 dbSNP
rs1037217379 825 dbSNP
rs906485174 826 dbSNP
rs556025471 830 dbSNP
rs1002246079 838 dbSNP
rs1299436525 839 dbSNP
rs1353186354 840 dbSNP
rs778047023 849 dbSNP
rs939504313 851 dbSNP
rs1057064933 863 dbSNP
rs1284591141 865 dbSNP
rs1358267302 867 dbSNP
rs1335821888 872 dbSNP
rs1415052021 875 dbSNP
rs1221831492 879 dbSNP
rs185500997 896 dbSNP
rs1012705096 901 dbSNP
rs1156315184 902 dbSNP
rs571423936 903 dbSNP
rs903826032 908 dbSNP
rs1162571971 909 dbSNP
rs1011013010 923 dbSNP
rs1217438183 927 dbSNP
rs1265375806 928 dbSNP
rs1021057084 934 dbSNP
rs1484825665 947 dbSNP
rs966863911 948 dbSNP
rs1488101588 951 dbSNP
rs1261228711 954 dbSNP
rs750431689 961 dbSNP
rs1239679809 969 dbSNP
rs556368886 972 dbSNP
rs1289867920 975 dbSNP
rs1187164072 976 dbSNP
rs1359029505 977 dbSNP
rs912148738 980 dbSNP
rs1218342852 987 dbSNP
rs1339445627 998 dbSNP
rs1295954704 999 dbSNP
rs45526035 1000 dbSNP
rs964729618 1000 dbSNP
rs1474016129 1004 dbSNP
rs920319939 1009 dbSNP
rs564203638 1011 dbSNP
rs930385506 1012 dbSNP
rs763232538 1013 dbSNP
rs2941511 1015 dbSNP
rs142285426 1016 dbSNP
rs998019418 1017 dbSNP
rs751362320 1020 dbSNP
rs1373050055 1025 dbSNP
rs1029950143 1027 dbSNP
rs151239544 1034 dbSNP
rs45628436 1035 dbSNP
rs1341875001 1043 dbSNP
rs1316430409 1046 dbSNP
rs1439766949 1047 dbSNP
rs45519441 1051 dbSNP
rs529235725 1052 dbSNP
rs1010917945 1058 dbSNP
rs372539531 1059 dbSNP
rs966811418 1062 dbSNP
rs1278070890 1063 dbSNP
rs918828161 1065 dbSNP
rs12451958 1069 dbSNP
rs1199936518 1070 dbSNP
rs1172499311 1085 dbSNP
rs1279677050 1090 dbSNP
rs1429359215 1092 dbSNP
rs1444285124 1094 dbSNP
rs45450597 1095 dbSNP
rs1019601175 1096 dbSNP
rs1178542775 1099 dbSNP
rs1456745450 1100 dbSNP
rs1260432219 1102 dbSNP
rs965014080 1106 dbSNP
rs1277399516 1107 dbSNP
rs1217036820 1109 dbSNP
rs1237913937 1116 dbSNP
rs975418653 1121 dbSNP
rs533425866 1122 dbSNP
rs1056719386 1124 dbSNP
rs1372522667 1135 dbSNP
rs1440875650 1137 dbSNP
rs920243988 1142 dbSNP
rs1181111488 1148 dbSNP
rs771823794 1157 dbSNP
rs1393778718 1158 dbSNP
rs1374505944 1159 dbSNP
rs45469091 1174 dbSNP
rs1462243907 1192 dbSNP
rs760363438 1194 dbSNP
rs1174197738 1195 dbSNP
rs983158699 1201 dbSNP
rs530658909 1202 dbSNP
rs1403906556 1208 dbSNP
rs1178059687 1209 dbSNP
rs776072495 1210 dbSNP
rs566901296 1211 dbSNP
rs1407815168 1215 dbSNP
rs1044176583 1219 dbSNP
rs1400824129 1220 dbSNP
rs903960117 1229 dbSNP
rs1483126201 1235 dbSNP
rs1236597356 1237 dbSNP
rs1045624315 1245 dbSNP
rs999511369 1248 dbSNP
rs1280445604 1253 dbSNP
rs1052468313 1258 dbSNP
rs1238718143 1259 dbSNP
rs927186903 1266 dbSNP
rs891712937 1268 dbSNP
rs1309052357 1271 dbSNP
rs182065817 1283 dbSNP
rs1301354829 1284 dbSNP
rs1029589714 1285 dbSNP
rs1376244347 1289 dbSNP
rs147109217 1291 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000336308.5 | 3UTR | UUCCUCCUCCCUCCCGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
100 hsa-miR-605-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061339 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT061584 BTG2 BTG anti-proliferation factor 2 2 6
MIRT076140 WDR81 WD repeat domain 81 2 2
MIRT079361 CCDC137 coiled-coil domain containing 137 2 2
MIRT079547 VAMP3 vesicle associated membrane protein 3 2 2
MIRT096242 CANX calnexin 2 2
MIRT243877 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT249186 AKIRIN1 akirin 1 2 8
MIRT273604 SP1 Sp1 transcription factor 2 2
MIRT316766 FOXC1 forkhead box C1 2 4
MIRT322410 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT370117 TRIB3 tribbles pseudokinase 3 2 2
MIRT392725 UBN2 ubinuclein 2 2 2
MIRT406910 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT407440 CTDSP1 CTD small phosphatase 1 2 2
MIRT441887 RD3 retinal degeneration 3 2 4
MIRT444979 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT445241 FOXD4 forkhead box D4 2 2
MIRT445500 FOXD4L5 forkhead box D4 like 5 2 2
MIRT445503 FOXD4L4 forkhead box D4 like 4 2 2
MIRT447025 FOXD4L1 forkhead box D4 like 1 2 2
MIRT447743 TMCC3 transmembrane and coiled-coil domain family 3 2 2
MIRT448761 HDX highly divergent homeobox 2 2
MIRT450003 HAX1 HCLS1 associated protein X-1 2 2
MIRT452830 FAM131B family with sequence similarity 131 member B 2 2
MIRT452872 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT453506 ARRB1 arrestin beta 1 2 2
MIRT454169 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT458742 CES2 carboxylesterase 2 2 2
MIRT459166 HSPA6 heat shock protein family A (Hsp70) member 6 2 21
MIRT460246 IL17RB interleukin 17 receptor B 2 4
MIRT460514 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT460698 RNF157 ring finger protein 157 2 2
MIRT461481 METTL1 methyltransferase like 1 2 2
MIRT462617 C20orf27 chromosome 20 open reading frame 27 2 4
MIRT463233 ZNF131 zinc finger protein 131 2 2
MIRT465699 TNPO2 transportin 2 2 8
MIRT466304 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT468957 RPS14 ribosomal protein S14 2 6
MIRT469571 RARA retinoic acid receptor alpha 2 2
MIRT469685 RAB5B RAB5B, member RAS oncogene family 2 2
MIRT470800 PMP22 peripheral myelin protein 22 2 2
MIRT471649 PANK2 pantothenate kinase 2 2 4
MIRT471722 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472281 NFIB nuclear factor I B 2 4
MIRT473680 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT475859 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT477326 EPHA2 EPH receptor A2 2 2
MIRT477831 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 2 2
MIRT478572 CTNND1 catenin delta 1 2 4
MIRT479634 CD81 CD81 molecule 2 2
MIRT481950 ANKRD11 ankyrin repeat domain 11 2 2
MIRT483696 ZNF74 zinc finger protein 74 2 6
MIRT488798 MALT1 MALT1 paracaspase 2 2
MIRT489066 STARD3 StAR related lipid transfer domain containing 3 2 2
MIRT492533 PSMD11 proteasome 26S subunit, non-ATPase 11 2 2
MIRT492857 NRARP NOTCH regulated ankyrin repeat protein 2 2
MIRT496793 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT500122 ZNF106 zinc finger protein 106 2 4
MIRT505359 TMEM167A transmembrane protein 167A 2 2
MIRT506786 KLHL15 kelch like family member 15 2 6
MIRT510692 SRM spermidine synthase 2 6
MIRT515841 CEP104 centrosomal protein 104 2 4
MIRT516448 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT528855 PKP1 plakophilin 1 2 2
MIRT533848 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT539025 ATXN7L1 ataxin 7 like 1 2 4
MIRT542872 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT546543 SATB2 SATB homeobox 2 2 2
MIRT554114 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT560569 ZNF460 zinc finger protein 460 2 2
MIRT560796 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT562836 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT563109 IFRD2 interferon related developmental regulator 2 2 2
MIRT564177 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT564283 ASB1 ankyrin repeat and SOCS box containing 1 2 2
MIRT564350 USP22 ubiquitin specific peptidase 22 2 2
MIRT565279 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT565338 TMEM104 transmembrane protein 104 2 2
MIRT565905 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT567108 ITGB1 integrin subunit beta 1 2 2
MIRT567601 FANCF Fanconi anemia complementation group F 2 2
MIRT567779 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT568075 CENPQ centromere protein Q 2 2
MIRT624304 COL12A1 collagen type XII alpha 1 chain 2 2
MIRT644395 CDKL1 cyclin dependent kinase like 1 2 2
MIRT661547 ZNF674 zinc finger protein 674 2 4
MIRT670949 IRAK3 interleukin 1 receptor associated kinase 3 2 2
MIRT672951 AKAP5 A-kinase anchoring protein 5 2 2
MIRT697426 ZFP36 ZFP36 ring finger protein 2 2
MIRT700793 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT702657 ITGA3 integrin subunit alpha 3 2 2
MIRT708945 FZR1 fizzy and cell division cycle 20 related 1 2 2
MIRT713657 PLCE1 phospholipase C epsilon 1 2 2
MIRT719239 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719951 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT722048 HLA-E major histocompatibility complex, class I, E 2 2
MIRT722201 URM1 ubiquitin related modifier 1 2 2
MIRT724790 C1D C1D nuclear receptor corepressor 2 2
MIRT734347 CYP2B6 cytochrome P450 family 2 subfamily B member 6 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-605 Anthranilamide-pyrazolo[1,5-a]pyrimidine NULL NULL Quantitative real-time PCR neuroblastoma cells 23992861 2013 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-605 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-605 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-605 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-605-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)

Error report submission