miRTarBase - #MIRT490447


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pre-miRNA Information
pre-miRNA hsa-mir-3152   
Genomic Coordinates chr9: 18573306 - 18573379
Description Homo sapiens miR-3152 stem-loop
Comment Berezikov et al. proposed this sequence as a miRNA candidate based on the RAKE method .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3152-3p
Sequence 45| UGUGUUAGAAUAGGGGCAAUAA |66
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN8332435 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1056852374 2 dbSNP
rs894329932 11 dbSNP
rs1429410622 12 dbSNP
rs13299349 13 dbSNP
rs539052066 14 dbSNP
rs1028341616 15 dbSNP
rs969346701 16 dbSNP
rs1176815888 19 dbSNP
rs1474970048 19 dbSNP
rs1240079601 21 dbSNP
Putative Targets

Gene Information
Gene Symbol GLUD1   
Synonyms GDH, GDH1, GLUD
Description glutamate dehydrogenase 1
Transcript NM_005271   
Expression
Putative miRNA Targets on GLUD1
3'UTR of GLUD1
(miRNA target sites are highlighted)		 
>GLUD1|NM_005271|3'UTR
   1 ATGGATCATGGCTGACTTCCTCACTATCCTCTTCACATGTAACTTCTGCAGACCTATCACAAGTTTACATGTAACCACAG
  81 AAATCCCTTTCTCTCCTGACTCATTAATAATGGATACCATTCTCAACAAGTCAATCCAAGTCAGCCCGTTAAGGAGAAAG
 161 AAATTAAGGTTAGCGGATCATGTACAAGCTGAGTGTGAAAGTAGAAATCACCTACACCAGAGAGCCATTTTGGTATTTTG
 241 CCTTTAAATAAAAAGCCTCCTTTATCTGGCTGTGCAGCCTTGCTCTGTGGCTTTTCCCAACACAATCAGTGCTAGTGCTG
 321 GGGAGGAACAGTCAAGAGCAGTCAGTTGCTTGCTTATTTTTTCTGGATGAGTCTGGGACACACTGTAACTTTAACACATT
 401 TAAGAAGTAGGTGTGTGGCCTTTTCAGAAGGTGGCATGGTCCTCAAGTGAGTTCTTAGTATTTTATATCAGCAAAATAAT
 481 TCAATTTTGCAGGTTGCAAACAAATATAAAACCTGTTTCTGTTTATGAATATTATTCTTTTAGAATAGAATAAGTACATG
 561 CTGCTGTAATAAAATTGCCTTTAATCACTTAACAAGCCTAACCTTGACTCAAACAGTGAATGCCTATAGAAATAATAAAT
 641 GAAAAAAACTAGTATTTTTATATCATAAAACAATGTCATTTATAGCTTATCATTCATGTATTGTCCAGCAGACATTAAAA
 721 GCCCTGTGGATAATTAAGTTATCTTCATACCTGCAAAATGGTGGAGGCTATTTTCATTAAAACTGTCAGAATTTGCTTAC
 801 TATAATTATGATACAGTCCAAAGAATGCAGTCACTTTTTATCATGTTAACTAATTGTTCTCTTTTGAAGATCTATGGTTG
 881 ACTAATTAAACAATAATTCAAGTAGAGTGTCCCAGAAAAAAACCACTTGGGCTCCCTGTTTGGAGTCTGGCTGGCTCTGA
 961 GCATTGCCAATGGCCCCTACTCACCTGACTTTGTATCCTCTCCTTTTAGAGGCTTTGCATTCTGCACCCAGCTTCACTAA
1041 CAGTGGGCTGAAAACATCCTTGGGTTGAGTGTTTCATTTGGGAGTTATTTGGCCAGGGCCTTTTGAACAGTAGTGTCCCC
1121 ATGAAGTGCTAGATAATATATGTGTAAGAGTCAGCTTTTTTTTTTTTTTTAACTCTAACACCCTTCAGAAATTTCTAACT
1201 ACTTTGTAACTGCATGGCTTAACCTGGTGATAAAAGCAGTTATTAAAAGTCTACGTTTTCCAAAACTTACGTTTCTTTTC
1281 TGTGTTTTTACATGTGGTAGTTTCTCTTTTCATAAGTTATAATACTGCAATTGGATTTCTGAAATGTTTATAGCGACCAC
1361 CTGTATAACATTTCCTTCCACTTTATTGTGAGCTGCCCAGATTTTATTCTTGAATTGTTTTTTTTTTTTTTGTTCGGTGC
1441 TTTACACGTTCAGAGAAACTTCCCGAGTAACGAACTATAGAAATGATCCCTGAAAGCATAGTCTTTATTCTCGAATTATT
1521 TTGTATTTTATTAAATAATATGAACAGCTAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aauAACGGGGAUAAGAUUGUGu 5'
             || :::: | |||||||| 
Target 5' tttTTTTTTTAACTCTAACACc 3'
 1161 - 1182 155.00 -7.70
2 
miRNA  3' aaUAACGGGGAUAA---GAUUGUgu 5'
            ||||||::|| |   :|||||  
Target 5' aaATTGCCTTTAATCACTTAACAag 3'
 572 - 596 136.00 -13.10
3 
miRNA  3' aauaacgGGGAUA---AGAUUGUGu 5'
                 | ||:|   |:|||||| 
Target 5' tgggacaCACTGTAACTTTAACACa 3'
 374 - 398 135.00 -9.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
301387 64 ClinVar
301388 64 ClinVar
301386 205 ClinVar
301385 355 ClinVar
879214 469 ClinVar
301384 496 ClinVar
301383 852 ClinVar
879213 868 ClinVar
301382 908 ClinVar
301381 970 ClinVar
301380 972 ClinVar
878616 998 ClinVar
878615 1139 ClinVar
301379 1171 ClinVar
878614 1181 ClinVar
878613 1211 ClinVar
301378 1252 ClinVar
301377 1270 ClinVar
301376 1282 ClinVar
877600 1379 ClinVar
877599 1419 ClinVar
301375 1436 ClinVar
301374 1464 ClinVar
877598 1501 ClinVar
877597 1515 ClinVar
301373 1545 ClinVar
301372 1548 ClinVar
COSN26603911 8 COSMIC
COSN30113619 88 COSMIC
COSN508452 102 COSMIC
COSN22825779 109 COSMIC
COSN30164171 148 COSMIC
COSN31484050 197 COSMIC
COSN30171316 210 COSMIC
COSN31584289 356 COSMIC
COSN31546795 454 COSMIC
COSN35448 579 COSMIC
COSN31567999 680 COSMIC
COSN27804804 1047 COSMIC
COSN32061747 1156 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747656281 4 dbSNP
rs1248191512 5 dbSNP
rs1202835639 8 dbSNP
rs780781977 11 dbSNP
rs71473298 19 dbSNP
rs1160181087 24 dbSNP
rs754979583 26 dbSNP
rs751493714 32 dbSNP
rs1345884160 35 dbSNP
rs779746225 37 dbSNP
rs758182664 45 dbSNP
rs1367623777 48 dbSNP
rs767571915 57 dbSNP
rs760101776 64 dbSNP
rs1370907788 71 dbSNP
rs1429059606 88 dbSNP
rs1168474993 91 dbSNP
rs930312036 93 dbSNP
rs1322154251 95 dbSNP
rs540517916 99 dbSNP
rs1388834664 102 dbSNP
rs774819008 104 dbSNP
rs572912081 108 dbSNP
rs766790101 113 dbSNP
rs1294793009 119 dbSNP
rs898859927 132 dbSNP
rs1038947048 142 dbSNP
rs557683852 147 dbSNP
rs1253666482 148 dbSNP
rs1343476542 151 dbSNP
rs1378158665 153 dbSNP
rs943283183 154 dbSNP
rs1279699648 155 dbSNP
rs763189776 159 dbSNP
rs1159923572 172 dbSNP
rs776352597 175 dbSNP
rs532011125 181 dbSNP
rs1186858414 189 dbSNP
rs1439777023 197 dbSNP
rs1247621895 202 dbSNP
rs1450215215 203 dbSNP
rs886047373 205 dbSNP
rs1195416389 215 dbSNP
rs539945918 225 dbSNP
rs1464419757 272 dbSNP
rs1196694941 277 dbSNP
rs768138483 278 dbSNP
rs987322607 283 dbSNP
rs1453075315 285 dbSNP
rs746648877 294 dbSNP
rs1204386912 296 dbSNP
rs1318176948 301 dbSNP
rs1487424579 316 dbSNP
rs1288510557 317 dbSNP
rs913975821 333 dbSNP
rs1329862441 336 dbSNP
rs1233113677 345 dbSNP
rs569595849 355 dbSNP
rs557411283 367 dbSNP
rs1207186338 369 dbSNP
rs1267821216 370 dbSNP
rs1273539623 372 dbSNP
rs1236026165 383 dbSNP
rs1803640 385 dbSNP
rs771673518 386 dbSNP
rs745846225 389 dbSNP
rs981011138 392 dbSNP
rs1318055782 411 dbSNP
rs970965937 417 dbSNP
rs183269542 425 dbSNP
rs371201485 427 dbSNP
rs1358159888 430 dbSNP
rs567450824 435 dbSNP
rs555738687 436 dbSNP
rs778942506 437 dbSNP
rs534035996 439 dbSNP
rs770787844 442 dbSNP
rs566474794 469 dbSNP
rs1387893093 482 dbSNP
rs551365539 484 dbSNP
rs1347937128 489 dbSNP
rs886047372 496 dbSNP
rs1227009336 501 dbSNP
rs1288057787 506 dbSNP
rs139349516 517 dbSNP
rs778067219 522 dbSNP
rs1263879065 531 dbSNP
rs1378193586 537 dbSNP
rs995033610 537 dbSNP
rs1269589108 540 dbSNP
rs568890008 550 dbSNP
rs898791518 551 dbSNP
rs1179755015 569 dbSNP
rs1039124892 573 dbSNP
rs1419328792 575 dbSNP
rs1160901555 587 dbSNP
rs1366321769 588 dbSNP
rs1457031986 604 dbSNP
rs1163656242 607 dbSNP
rs1217655679 616 dbSNP
rs376004427 624 dbSNP
rs752911376 627 dbSNP
rs1007460007 628 dbSNP
rs1485365107 634 dbSNP
rs1276558342 649 dbSNP
rs1307828260 664 dbSNP
rs890360188 665 dbSNP
rs1393466775 671 dbSNP
rs1051711883 672 dbSNP
rs189992553 675 dbSNP
rs1293958080 677 dbSNP
rs185986975 677 dbSNP
rs1361544753 678 dbSNP
rs1270130976 689 dbSNP
rs181450783 690 dbSNP
rs1053838276 697 dbSNP
rs781298299 698 dbSNP
rs936760918 723 dbSNP
rs1279653634 738 dbSNP
rs1386505200 742 dbSNP
rs1427232607 743 dbSNP
rs1400195310 751 dbSNP
rs926613764 758 dbSNP
rs1355618615 761 dbSNP
rs1463902969 768 dbSNP
rs1301400686 787 dbSNP
rs1378724826 789 dbSNP
rs1339555971 796 dbSNP
rs981197481 797 dbSNP
rs540528149 809 dbSNP
rs1363178676 813 dbSNP
rs1227724903 814 dbSNP
rs970723573 825 dbSNP
rs1307995538 828 dbSNP
rs755002858 834 dbSNP
rs752093902 835 dbSNP
rs1253960820 846 dbSNP
rs1402746167 848 dbSNP
rs150260124 852 dbSNP
rs1244563484 856 dbSNP
rs1447204958 857 dbSNP
rs1463825823 863 dbSNP
rs1425553025 864 dbSNP
rs1420863530 866 dbSNP
rs1430742705 868 dbSNP
rs1174438019 869 dbSNP
rs1194172851 874 dbSNP
rs951545998 878 dbSNP
rs1338991291 891 dbSNP
rs1027569093 896 dbSNP
rs1472582264 899 dbSNP
rs1434544301 906 dbSNP
rs1270790992 907 dbSNP
rs140942830 908 dbSNP
rs1189626242 923 dbSNP
rs1216220398 923 dbSNP
rs1443086524 924 dbSNP
rs191372907 926 dbSNP
rs575571072 932 dbSNP
rs1197335597 934 dbSNP
rs1320670444 946 dbSNP
rs1264678816 947 dbSNP
rs1463223174 951 dbSNP
rs963477277 953 dbSNP
rs1017379209 954 dbSNP
rs1050278 957 dbSNP
rs1259085813 964 dbSNP
rs760207211 970 dbSNP
rs12980 972 dbSNP
rs11548293 975 dbSNP
rs1051680759 992 dbSNP
rs766730554 998 dbSNP
rs1449514440 1000 dbSNP
rs1481008153 1001 dbSNP
rs1179018845 1005 dbSNP
rs1050306 1009 dbSNP
rs1410055164 1014 dbSNP
rs1009491403 1017 dbSNP
rs1050319 1022 dbSNP
rs1330550348 1026 dbSNP
rs892267000 1044 dbSNP
rs1054039415 1064 dbSNP
rs1434353677 1069 dbSNP
rs1444444751 1080 dbSNP
rs1050340 1087 dbSNP
rs936744316 1089 dbSNP
rs1223907245 1104 dbSNP
rs1171115092 1113 dbSNP
rs1326674150 1117 dbSNP
rs926679548 1118 dbSNP
rs1284492877 1134 dbSNP
rs1448267684 1136 dbSNP
rs1050359 1148 dbSNP
rs1218739508 1150 dbSNP
rs1404553619 1153 dbSNP
rs1411822027 1155 dbSNP
rs1045153274 1156 dbSNP
rs1202051232 1169 dbSNP
rs1410428371 1171 dbSNP
rs372802549 1171 dbSNP
rs80258277 1171 dbSNP
rs878902279 1171 dbSNP
rs779036919 1173 dbSNP
rs1403730964 1176 dbSNP
rs1162944650 1177 dbSNP
rs1364890358 1179 dbSNP
rs3190657 1180 dbSNP
rs917955632 1180 dbSNP
rs542298445 1181 dbSNP
rs573888506 1182 dbSNP
rs1441171139 1184 dbSNP
rs55900957 1197 dbSNP
rs1459472457 1202 dbSNP
rs555551007 1205 dbSNP
rs1352380322 1206 dbSNP
rs1226132895 1219 dbSNP
rs534100218 1223 dbSNP
rs920083573 1225 dbSNP
rs1225313375 1227 dbSNP
rs1250203307 1229 dbSNP
rs886047371 1252 dbSNP
rs974629632 1253 dbSNP
rs964273482 1254 dbSNP
rs1320309771 1255 dbSNP
rs1183096678 1260 dbSNP
rs1385888430 1261 dbSNP
rs1426602696 1268 dbSNP
rs1165440302 1270 dbSNP
rs886047370 1270 dbSNP
rs1017763971 1271 dbSNP
rs1409217287 1271 dbSNP
rs181931207 1282 dbSNP
rs1449968149 1285 dbSNP
rs1229711628 1289 dbSNP
rs1313771549 1293 dbSNP
rs1382953676 1298 dbSNP
rs954323591 1299 dbSNP
rs1030012066 1301 dbSNP
rs1339231294 1316 dbSNP
rs1196748158 1319 dbSNP
rs1275504226 1320 dbSNP
rs1440929523 1321 dbSNP
rs1203328886 1328 dbSNP
rs188823038 1330 dbSNP
rs1446581350 1331 dbSNP
rs892394285 1344 dbSNP
rs1032282901 1348 dbSNP
rs888784571 1354 dbSNP
rs1032691829 1355 dbSNP
rs184760134 1365 dbSNP
rs1045125321 1369 dbSNP
rs771903257 1375 dbSNP
rs181813972 1379 dbSNP
rs1041924756 1384 dbSNP
rs1454125878 1386 dbSNP
rs896455395 1389 dbSNP
rs949926928 1400 dbSNP
rs1435428692 1406 dbSNP
rs1347933052 1409 dbSNP
rs1325325204 1414 dbSNP
rs1228745864 1415 dbSNP
rs937936833 1417 dbSNP
rs1379981736 1418 dbSNP
rs1264060457 1419 dbSNP
rs895697576 1419 dbSNP
rs1441629623 1420 dbSNP
rs775610348 1422 dbSNP
rs920160827 1429 dbSNP
rs1055721287 1431 dbSNP
rs1261067427 1432 dbSNP
rs1470603603 1432 dbSNP
rs769832697 1432 dbSNP
rs867007728 1432 dbSNP
rs1487688851 1433 dbSNP
rs1429576849 1434 dbSNP
rs1286645194 1435 dbSNP
rs1470725020 1435 dbSNP
rs886047369 1436 dbSNP
rs1382276101 1440 dbSNP
rs1320919767 1447 dbSNP
rs1222840019 1448 dbSNP
rs886047368 1464 dbSNP
rs1284260457 1465 dbSNP
rs1325952360 1467 dbSNP
rs937958839 1471 dbSNP
rs773995364 1472 dbSNP
rs1206974788 1478 dbSNP
rs1263773104 1483 dbSNP
rs1355255199 1484 dbSNP
rs1309835654 1491 dbSNP
rs985846603 1498 dbSNP
rs984828210 1499 dbSNP
rs768450394 1501 dbSNP
rs1029977680 1506 dbSNP
rs1362848448 1510 dbSNP
rs1453928835 1512 dbSNP
rs987785881 1513 dbSNP
rs1365464296 1518 dbSNP
rs760448125 1523 dbSNP
rs1364263561 1527 dbSNP
rs956424946 1530 dbSNP
rs1032663061 1534 dbSNP
rs1404825843 1535 dbSNP
rs886047367 1545 dbSNP
rs886047366 1548 dbSNP
rs550416272 1550 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aauaacGGGGAUAAGAUUGUGu 5'
                :::: | |||||||| 
Target 5' ------UUUUAACUCUAACACc 3'
 		1 - 16
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000277865.4 | 3UTR | UUUUAACUCUAACACCCUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
60 hsa-miR-3152-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT068760 RB1 RB transcriptional corepressor 1 2 2
MIRT142268 DCTN5 dynactin subunit 5 2 8
MIRT179443 TBRG1 transforming growth factor beta regulator 1 2 2
MIRT221382 DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 2 6
MIRT332510 CD81 CD81 molecule 2 2
MIRT442419 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT445519 PLXDC2 plexin domain containing 2 2 2
MIRT464185 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT467933 SLC16A6 solute carrier family 16 member 6 2 2
MIRT468378 SETD5 SET domain containing 5 2 2
MIRT468486 SESN3 sestrin 3 2 2
MIRT468928 RPS24 ribosomal protein S24 2 2
MIRT478171 DENND5B DENN domain containing 5B 2 2
MIRT490447 GLUD1 glutamate dehydrogenase 1 2 2
MIRT494675 ARL5B ADP ribosylation factor like GTPase 5B 2 2
MIRT502287 GNG5 G protein subunit gamma 5 2 6
MIRT506078 PPP2CA protein phosphatase 2 catalytic subunit alpha 2 6
MIRT508008 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT508760 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT509091 SYNPO2L synaptopodin 2 like 2 4
MIRT511968 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 4
MIRT515210 CRCP CGRP receptor component 2 2
MIRT516377 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT517047 ZNF678 zinc finger protein 678 2 2
MIRT521125 SHROOM4 shroom family member 4 2 2
MIRT521277 RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component 2 2
MIRT522772 LAMP2 lysosomal associated membrane protein 2 2 6
MIRT524419 CNKSR3 CNKSR family member 3 2 2
MIRT529398 ICK intestinal cell kinase 2 2
MIRT529965 PHF7 PHD finger protein 7 2 2
MIRT530189 TIGD2 tigger transposable element derived 2 2 2
MIRT533716 TMEM30A transmembrane protein 30A 2 2
MIRT543170 FICD FIC domain containing 2 2
MIRT548496 E2F8 E2F transcription factor 8 2 2
MIRT555020 RAB23 RAB23, member RAS oncogene family 2 2
MIRT560728 ZNF529 zinc finger protein 529 2 10
MIRT564890 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT567327 HMGB1 high mobility group box 1 2 2
MIRT568035 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT574763 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT620811 SLC26A2 solute carrier family 26 member 2 2 2
MIRT622456 RNF19B ring finger protein 19B 2 2
MIRT636240 SIM1 single-minded family bHLH transcription factor 1 2 2
MIRT643231 MUC15 mucin 15, cell surface associated 2 2
MIRT646319 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT646674 CCDC69 coiled-coil domain containing 69 2 2
MIRT650043 VHL von Hippel-Lindau tumor suppressor 2 2
MIRT652533 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT663022 CD40LG CD40 ligand 2 2
MIRT667465 MAPK10 mitogen-activated protein kinase 10 2 2
MIRT668620 EEA1 early endosome antigen 1 2 2
MIRT675678 SLC35F5 solute carrier family 35 member F5 2 2
MIRT681814 N4BP2L2 NEDD4 binding protein 2 like 2 2 2
MIRT682674 CPM carboxypeptidase M 2 2
MIRT701447 NFIC nuclear factor I C 2 2
MIRT706222 C20orf144 chromosome 20 open reading frame 144 2 2
MIRT707510 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT710466 ASTN2 astrotactin 2 2 2
MIRT712957 SGCD sarcoglycan delta 2 2
MIRT723030 MYLIP myosin regulatory light chain interacting protein 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3152-3p 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3152-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3152-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-miR-3152-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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