miRTarBase - #MIRT492084


—
pre-miRNA Information
pre-miRNA hsa-mir-7107   
Genomic Coordinates chr12: 121444273 - 121444352
Description Homo sapiens miR-7107 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7107-5p
Sequence 6| UCGGCCUGGGGAGGAGGAAGGG |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782634189 2 dbSNP
rs782536354 3 dbSNP
rs1230027540 4 dbSNP
rs539127530 5 dbSNP
rs782765349 9 dbSNP
rs55671311 10 dbSNP
rs183760300 11 dbSNP
rs782805318 12 dbSNP
rs782108772 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TCF21   
Synonyms POD1, bHLHa23
Description transcription factor 21
Transcript NM_198392   
Other Transcripts NM_003206   
Expression
Putative miRNA Targets on TCF21
3'UTR of TCF21
(miRNA target sites are highlighted)		 
>TCF21|NM_198392|3'UTR
   1 CCTTGGAGTTTGGTACCTGGAGCGAGAGCTTCTCCGCCCTTCCACCAACCCCACAGGCCGCTTCGCGGGTGGAGCCCTCT
  81 GCCTGGCCATGGAGGAAGGATCCCGCTAGGCTGGTCCCGACTGGAGAAGCTGCTCTGCCAGGTGTGCTCTCTGTCAGCAA
 161 TAGTGACCTCATTACCAAGGGGTGGCGACCACATTACCAAGCGCAATTCCCCATTCTCCAAGGGCTGAGAACTTCGGTGA
 241 CTTCATCCACCTGTCTATTTGCACATGGAGGACTTTTCAAGATGTCAGGATACCCTTCCATCACCCCACCACCGCCACCC
 321 CAACTTGACTTTCAAGAACACATTTCAAGCTCTGGCCAGAGTCCCGTTCCTCAAATTCATGTGTTCTCTCCTTTCTACCA
 401 GAGGGATAGAGCCCATGCCTCAACCTATCCAGAGTTCAAATCAAAGAGTCCCCAGTGTGATTCAATTGATTGCCTTTCAC
 481 GTTTCGCAAATTTTCCAATCTCCCACTCACGTTTTTACAAAACGAATGCTCTAAATTCTGAGGATTCCAGGCAGGCCATC
 561 CATAGAGAAATAACTTTTTCTTGCTCATTCCCTTACAACCCCAATCTATACATGGATTTTTAGAAAGTCTTCATGGCTAT
 641 CTATAGTTCCCTACCAATAATTTGAAGCCTTTGCTTTAGGCAGGAGGCATGTGGCTATGAATAGGGAACACGTAGATTTG
 721 ACCCTGGTTCTGCATCCAACTAGCTGTTTCTTGAAAGAGCCTGGATCCTCAGTTTTCCCATCTCTGCAAGCAGGGATAAC
 801 GGTAATGAGAATGATAATAATCATTATATGCAGACCTTCCTCTTTCATCTTACAGAGGCTTAGTGAGGCTCAGATGAGAT
 881 TATATCTGTAAAATCCCTTGGTAAAGGAAAAGCTCCGTGAAAATGTCAGTTACTTTTACTAAGTGGCGGGTAGTGAATTA
 961 TCTGTGCCTAGACCCAAACTGAAAGTGTCTCAGGCAGGAAGTTCCAAGGGATGTATGTTTATAGCATCCAGGCAATGATC
1041 TTTTTTTTTCCACGAACTAAAATACCTCTTTTTGGTATCTATTGACTCTTTCTCTCTCTCTTTCTGTCTCTCTTTCACCT
1121 TGCACCTCTCCCTAATGCTCTCTAAATTTGTCCAGAGCTTTCTTTTTCCTAGAAATCCAGAGAGCAAAGTCAGAGCCTGG
1201 CACCTGCAGATAGGATAACACTGGTGTCTGATGGTGAGGCTGCCCAGTCCCATCAGGAGCCTCAGCCAAGGAGGGGCCTG
1281 GGCACACTCAGGTCCCCATGGTTGTCCATTGAATGGAGTGAGGATCAAGGTGGGAATGACTGGGTGGTGGCTGCCACTAG
1361 CCCAGGAACATGACAACGTGACCACACCACACATGCCTCCAACACACACCCACAGTCTAAACATCTCTCCTTCTCAGTGA
1441 GCCCTTCTCCCATTCCAGATCATCAGCACACCCACACCCACCATAGGTCTCTCTCCTCCGGTCTTCCCAGAAGGGTAAAA
1521 CTCCCAGCCTACCCTGCTCCAGCTTCAGCCCAGGTAGTTGGTGTGTCTCAATATGAATAGGGGGTGAGTAGCTTCATAGA
1601 AAGAATGGGGAACTCCCTTGGCCTCAAGCCAGTATAGTTTGGAAGTTGGGGGTCGGGGATGTTAAGGGTGGGGAGTATCC
1681 TGCCTGTGACCTCTAGGTTATGAAAACTATCTTAGAAGGTGCTTTTAGAAAGAACCAGGAGAACAACCAAAGCAGCTTAC
1761 AGACGCCTGAACGGAGAATGAAGTGTTTCAAGTAAGCGAGTCTGCAAGTTCTCAGAAGCAGACAGATATCCAATCTGGAC
1841 TGCAGCCAGGGAAGTCCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCATTGCTTGTATGACTTCACAAGCAACT
1921 CAGGATCATTCTAGCAGGCTTTCCCACTGTCAAACAGAGACTTCATTCTAAAAAGAGAAGTGATAAACAGAGCTCCAGCT
2001 CTGCTAGCTCTATATATTTACTGATTAGTGGAAAGCACTGACCAAGGAGACTTTTAAGCCAGTGGTTCTTCAGAATCACC
2081 TAGATGCCTCCACCCTCCAGAGATCCTGAGTCCAGGAGTCTGAAGTGGGGCCCCAGGTGATGTCATTGCTGCTGGTCCCA
2161 GGACCACATTTTAACAATCAATGTTTTCAGGTGTCTCATGAGGAACACTACTTAATGCAGTGGGAAAGAAAATATTTCAG
2241 AGGAGAATTTTTTCTTAAAGAAGCTGCATATTCTGGACTCTAATTTAGTTTAATTCACTCCAGGATGGCACGCAGGATTC
2321 CTAATTCTTAAATGCCATTCAGTCTGGACTTCAAATCACTTGTCTTCAGAAAATAAAAGATTTGTTCCACCAAAAAAAAA
2401 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggGAAGGAGG--AGGG-GUCCGGCu 5'
            ||||| ||   ||| ||||||| 
Target 5' ccCTTCCACCAACCCCACAGGCCGc 3'
 37 - 61 166.00 -33.60
2 
miRNA  3' gggaaggaggAGGG---GUCCGGcu 5'
                    |:||   ||||||  
Target 5' attctgaggaTTCCAGGCAGGCCat 3'
 535 - 559 124.00 -16.70
3 
miRNA  3' gggaaggAGGAGGGGUCCGGCu 5'
                 ||| | |:||||:| 
Target 5' ggaaggaTCC-CGCTAGGCTGg 3'
 94 - 114 122.00 -18.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30469661 22 COSMIC
COSN30470905 26 COSMIC
COSN30639053 42 COSMIC
COSN30454348 49 COSMIC
COSN30460729 59 COSMIC
COSN31497088 78 COSMIC
COSN21323248 191 COSMIC
COSN26094999 418 COSMIC
COSN1325278 583 COSMIC
COSN23795746 1491 COSMIC
COSN21375112 1574 COSMIC
COSN18950468 1754 COSMIC
COSN28946039 1786 COSMIC
COSN32056594 1796 COSMIC
COSN28290557 2021 COSMIC
COSN14916944 2216 COSMIC
COSN25591706 2394 COSMIC
COSN16103693 2399 COSMIC
COSN26223761 2587 COSMIC
COSN14701946 2840 COSMIC
COSN6304469 2910 COSMIC
COSN6304470 3084 COSMIC
COSN24544920 3211 COSMIC
COSN23188610 3237 COSMIC
COSN25881515 3444 COSMIC
COSN26607005 3475 COSMIC
rs12190287 1586 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs200602364 6 dbSNP
rs781635603 7 dbSNP
rs1311708779 10 dbSNP
rs1170269451 11 dbSNP
rs1229189028 12 dbSNP
rs1277108714 13 dbSNP
rs1482195041 14 dbSNP
rs1178448137 18 dbSNP
rs1006736170 19 dbSNP
rs373325410 25 dbSNP
rs745671255 28 dbSNP
rs1489645382 29 dbSNP
rs1190015836 30 dbSNP
rs376667026 31 dbSNP
rs1432145775 32 dbSNP
rs756682579 34 dbSNP
rs769420004 36 dbSNP
rs778134064 37 dbSNP
rs369704773 38 dbSNP
rs201898286 39 dbSNP
rs369916071 40 dbSNP
rs775406576 41 dbSNP
rs760358719 42 dbSNP
rs764158821 43 dbSNP
rs776420567 45 dbSNP
rs761671595 46 dbSNP
rs201763632 47 dbSNP
rs1227971421 49 dbSNP
rs181269946 51 dbSNP
rs749885222 52 dbSNP
rs1258275362 53 dbSNP
rs531047577 57 dbSNP
rs993716568 61 dbSNP
rs1458789477 64 dbSNP
rs1035858509 71 dbSNP
rs1281339559 75 dbSNP
rs910536362 77 dbSNP
rs1421710290 78 dbSNP
rs768093248 88 dbSNP
rs1319969591 92 dbSNP
rs371784661 98 dbSNP
rs550818611 104 dbSNP
rs943630437 107 dbSNP
rs1040641470 108 dbSNP
rs567621197 118 dbSNP
rs993639693 120 dbSNP
rs1267437198 127 dbSNP
rs969060355 129 dbSNP
rs536221601 132 dbSNP
rs886831767 145 dbSNP
rs1220559748 152 dbSNP
rs1426186714 154 dbSNP
rs553347368 168 dbSNP
rs1005649382 169 dbSNP
rs781710416 174 dbSNP
rs1371413153 175 dbSNP
rs925023973 176 dbSNP
rs1459456191 178 dbSNP
rs1294367928 187 dbSNP
rs956655465 200 dbSNP
rs57108836 202 dbSNP
rs1416730125 207 dbSNP
rs1170756106 215 dbSNP
rs1403305203 216 dbSNP
rs1301113229 218 dbSNP
rs1192437526 222 dbSNP
rs969015751 224 dbSNP
rs1215154713 225 dbSNP
rs1002113672 228 dbSNP
rs1468160583 230 dbSNP
rs1259014102 238 dbSNP
rs1200600305 242 dbSNP
rs539101653 264 dbSNP
rs923092385 278 dbSNP
rs1294680355 279 dbSNP
rs960531868 280 dbSNP
rs1234554841 282 dbSNP
rs933250430 290 dbSNP
rs1246289624 294 dbSNP
rs1292090441 295 dbSNP
rs1393269471 297 dbSNP
rs77892079 300 dbSNP
rs74322630 301 dbSNP
rs1466708297 305 dbSNP
rs1393638248 313 dbSNP
rs987959865 320 dbSNP
rs1219783177 321 dbSNP
rs913991556 342 dbSNP
rs559140569 343 dbSNP
rs1265880365 345 dbSNP
rs1238989034 348 dbSNP
rs1180800471 349 dbSNP
rs577902818 352 dbSNP
rs1456635758 355 dbSNP
rs1488784130 356 dbSNP
rs1272295128 374 dbSNP
rs1201119710 381 dbSNP
rs1347735943 387 dbSNP
rs1254827074 388 dbSNP
rs1233978148 393 dbSNP
rs968183522 395 dbSNP
rs1311942565 396 dbSNP
rs1186460478 397 dbSNP
rs1448484617 397 dbSNP
rs527582894 398 dbSNP
rs748710162 398 dbSNP
rs1414603575 405 dbSNP
rs1404262608 410 dbSNP
rs910590219 412 dbSNP
rs1425671448 414 dbSNP
rs1159491473 419 dbSNP
rs1433842264 420 dbSNP
rs1380629265 427 dbSNP
rs1160239981 428 dbSNP
rs1468744125 435 dbSNP
rs1050281646 439 dbSNP
rs1232580484 444 dbSNP
rs943345921 444 dbSNP
rs747594868 445 dbSNP
rs1254657439 449 dbSNP
rs776004223 451 dbSNP
rs1210729574 452 dbSNP
rs373864394 460 dbSNP
rs1288521787 462 dbSNP
rs1160673886 471 dbSNP
rs929476022 474 dbSNP
rs1431116025 480 dbSNP
rs1038097807 481 dbSNP
rs1288239850 498 dbSNP
rs140145477 502 dbSNP
rs993563386 510 dbSNP
rs1414019275 519 dbSNP
rs1057350339 525 dbSNP
rs185872268 536 dbSNP
rs1013195083 537 dbSNP
rs1243328612 540 dbSNP
rs573901731 548 dbSNP
rs1407489076 551 dbSNP
rs1164097843 559 dbSNP
rs1023180116 560 dbSNP
rs1317921826 563 dbSNP
rs969469696 564 dbSNP
rs1000572681 572 dbSNP
rs904906955 575 dbSNP
rs1240692984 579 dbSNP
rs1187320566 585 dbSNP
rs1488872652 593 dbSNP
rs1001786698 595 dbSNP
rs1266049608 596 dbSNP
rs1032404321 605 dbSNP
rs1184741158 611 dbSNP
rs1446828335 612 dbSNP
rs956509912 624 dbSNP
rs538042845 625 dbSNP
rs189593765 629 dbSNP
rs1232211825 632 dbSNP
rs559287025 632 dbSNP
rs1341046422 633 dbSNP
rs182067699 643 dbSNP
rs1381098615 647 dbSNP
rs954506553 649 dbSNP
rs1401105534 650 dbSNP
rs1323997413 651 dbSNP
rs986017847 657 dbSNP
rs979580277 665 dbSNP
rs910502868 667 dbSNP
rs1478229532 674 dbSNP
rs941938202 681 dbSNP
rs1475387145 687 dbSNP
rs1247616959 691 dbSNP
rs545086457 694 dbSNP
rs117288200 697 dbSNP
rs929389529 698 dbSNP
rs1341574162 699 dbSNP
rs1212486104 709 dbSNP
rs1057216507 721 dbSNP
rs895991554 723 dbSNP
rs948833781 725 dbSNP
rs143822960 727 dbSNP
rs1325510079 730 dbSNP
rs1337238495 736 dbSNP
rs1447997102 742 dbSNP
rs1361185548 745 dbSNP
rs1381422905 763 dbSNP
rs1438421773 764 dbSNP
rs1044951765 765 dbSNP
rs1449770046 777 dbSNP
rs1311045784 781 dbSNP
rs187664216 786 dbSNP
rs1466188563 789 dbSNP
rs1373662132 790 dbSNP
rs556265579 795 dbSNP
rs904795248 797 dbSNP
rs1409829157 800 dbSNP
rs1426555865 801 dbSNP
rs1282672032 802 dbSNP
rs1000840910 814 dbSNP
rs1032017878 817 dbSNP
rs984097521 819 dbSNP
rs909418518 827 dbSNP
rs1313715352 830 dbSNP
rs146837864 831 dbSNP
rs1457956577 834 dbSNP
rs6569916 840 dbSNP
rs767540830 847 dbSNP
rs1279332972 849 dbSNP
rs1200561076 854 dbSNP
rs1009274165 857 dbSNP
rs1302443343 869 dbSNP
rs1447745626 878 dbSNP
rs191047280 879 dbSNP
rs1296508106 886 dbSNP
rs1441651949 894 dbSNP
rs1469860823 899 dbSNP
rs1038087597 900 dbSNP
rs1178930333 904 dbSNP
rs1175685647 909 dbSNP
rs1394811719 914 dbSNP
rs954452726 919 dbSNP
rs182881519 936 dbSNP
rs1252305740 941 dbSNP
rs1174972641 942 dbSNP
rs937693349 946 dbSNP
rs1237966332 948 dbSNP
rs1017838961 950 dbSNP
rs1212874802 951 dbSNP
rs753824780 956 dbSNP
rs1177094941 968 dbSNP
rs1240618891 984 dbSNP
rs973699583 984 dbSNP
rs919283796 997 dbSNP
rs1305180453 999 dbSNP
rs1468141160 1004 dbSNP
rs761779244 1013 dbSNP
rs566855650 1015 dbSNP
rs1413399135 1020 dbSNP
rs917375396 1028 dbSNP
rs538697276 1032 dbSNP
rs189389618 1035 dbSNP
rs903685453 1038 dbSNP
rs1421981315 1039 dbSNP
rs1365155471 1054 dbSNP
rs1044596648 1057 dbSNP
rs1441116768 1061 dbSNP
rs1277338644 1085 dbSNP
rs1189453424 1095 dbSNP
rs765282412 1099 dbSNP
rs1256801676 1101 dbSNP
rs750198984 1124 dbSNP
rs140723634 1131 dbSNP
rs868017519 1139 dbSNP
rs1215277563 1140 dbSNP
rs1322554647 1142 dbSNP
rs1283239439 1146 dbSNP
rs758159386 1149 dbSNP
rs1231589661 1155 dbSNP
rs1355383792 1156 dbSNP
rs2327432 1157 dbSNP
rs976148153 1160 dbSNP
rs1201047128 1161 dbSNP
rs1288688126 1166 dbSNP
rs1452520835 1168 dbSNP
rs1030367273 1170 dbSNP
rs892139263 1174 dbSNP
rs762727444 1180 dbSNP
rs983762366 1183 dbSNP
rs1194234744 1184 dbSNP
rs1286325104 1189 dbSNP
rs1259317745 1190 dbSNP
rs1248622630 1191 dbSNP
rs537215964 1194 dbSNP
rs1029950700 1195 dbSNP
rs890226832 1197 dbSNP
rs370915000 1198 dbSNP
rs1211864826 1203 dbSNP
rs751221127 1204 dbSNP
rs980211254 1206 dbSNP
rs1230211028 1208 dbSNP
rs1295234287 1208 dbSNP
rs1387768647 1221 dbSNP
rs557210387 1224 dbSNP
rs573791080 1227 dbSNP
rs1327557941 1229 dbSNP
rs1459567379 1231 dbSNP
rs1393045674 1232 dbSNP
rs1167992270 1233 dbSNP
rs536528433 1237 dbSNP
rs937790052 1239 dbSNP
rs1371321502 1242 dbSNP
rs994770207 1248 dbSNP
rs1408799357 1250 dbSNP
rs1326465942 1251 dbSNP
rs1026205083 1253 dbSNP
rs754499339 1256 dbSNP
rs992869988 1269 dbSNP
rs1255102944 1272 dbSNP
rs1191935723 1276 dbSNP
rs896191614 1279 dbSNP
rs780631397 1281 dbSNP
rs1338006807 1282 dbSNP
rs553042093 1283 dbSNP
rs2327433 1288 dbSNP
rs1438175291 1289 dbSNP
rs1271227273 1290 dbSNP
rs1369802123 1296 dbSNP
rs1338853104 1300 dbSNP
rs553725111 1301 dbSNP
rs778270544 1303 dbSNP
rs1292075666 1310 dbSNP
rs1435291839 1311 dbSNP
rs113762059 1314 dbSNP
rs377664671 1314 dbSNP
rs936133929 1319 dbSNP
rs1053283642 1323 dbSNP
rs913523835 1328 dbSNP
rs1239082836 1334 dbSNP
rs5880198 1337 dbSNP
rs997636631 1345 dbSNP
rs934226223 1347 dbSNP
rs1436200491 1353 dbSNP
rs1030832083 1356 dbSNP
rs1201486781 1358 dbSNP
rs950753194 1361 dbSNP
rs1489765175 1368 dbSNP
rs41286216 1370 dbSNP
rs1242580155 1374 dbSNP
rs1474811094 1377 dbSNP
rs41286218 1378 dbSNP
rs774607224 1381 dbSNP
rs575008880 1382 dbSNP
rs980305836 1383 dbSNP
rs201485756 1389 dbSNP
rs1039154658 1391 dbSNP
rs960194581 1392 dbSNP
rs543935930 1394 dbSNP
rs1408948493 1396 dbSNP
rs917621398 1398 dbSNP
rs995115450 1403 dbSNP
rs1468826122 1404 dbSNP
rs1364116240 1405 dbSNP
rs1188762750 1411 dbSNP
rs1476462873 1412 dbSNP
rs945072756 1425 dbSNP
rs1384229112 1430 dbSNP
rs1042420458 1435 dbSNP
rs1488848674 1444 dbSNP
rs1286811711 1447 dbSNP
rs1026151181 1450 dbSNP
rs1348108992 1459 dbSNP
rs1278390036 1461 dbSNP
rs1233429794 1463 dbSNP
rs950637952 1464 dbSNP
rs561509364 1466 dbSNP
rs936603437 1472 dbSNP
rs1291410375 1486 dbSNP
rs1038963202 1502 dbSNP
rs1345523341 1507 dbSNP
rs1014149569 1508 dbSNP
rs1399117531 1512 dbSNP
rs1024328688 1513 dbSNP
rs1384591963 1517 dbSNP
rs1165739361 1521 dbSNP
rs900376650 1525 dbSNP
rs1416298966 1527 dbSNP
rs1187800814 1536 dbSNP
rs1429214910 1547 dbSNP
rs1476046914 1548 dbSNP
rs997312020 1556 dbSNP
rs970422307 1558 dbSNP
rs1191509952 1563 dbSNP
rs1444910707 1569 dbSNP
rs1051867757 1573 dbSNP
rs12190287 1586 dbSNP
rs886497120 1589 dbSNP
rs547263852 1590 dbSNP
rs772347180 1592 dbSNP
rs1289785543 1595 dbSNP
rs1362587764 1595 dbSNP
rs1271701091 1601 dbSNP
rs753153790 1610 dbSNP
rs1326039932 1612 dbSNP
rs1326885039 1622 dbSNP
rs1463230213 1626 dbSNP
rs988960886 1628 dbSNP
rs1164313894 1630 dbSNP
rs7766238 1637 dbSNP
rs1284655634 1638 dbSNP
rs1422349362 1640 dbSNP
rs71576335 1643 dbSNP
rs765226937 1653 dbSNP
rs1166512204 1654 dbSNP
rs1446407548 1658 dbSNP
rs934258938 1663 dbSNP
rs1190919962 1680 dbSNP
rs1244514915 1688 dbSNP
rs1444641060 1691 dbSNP
rs1250534020 1692 dbSNP
rs1220262341 1695 dbSNP
rs1307997166 1701 dbSNP
rs1275072534 1710 dbSNP
rs750426182 1714 dbSNP
rs911561980 1717 dbSNP
rs942997157 1720 dbSNP
rs1038690864 1725 dbSNP
rs1443298036 1731 dbSNP
rs1369072399 1734 dbSNP
rs796600727 1735 dbSNP
rs1325291547 1745 dbSNP
rs762787754 1746 dbSNP
rs1443108232 1748 dbSNP
rs1356756548 1749 dbSNP
rs186151381 1754 dbSNP
rs1182622604 1759 dbSNP
rs994579394 1768 dbSNP
rs1395998304 1774 dbSNP
rs1047607259 1776 dbSNP
rs1455294312 1780 dbSNP
rs1392952869 1782 dbSNP
rs993376510 1787 dbSNP
rs917692593 1793 dbSNP
rs1159559408 1799 dbSNP
rs966884719 1801 dbSNP
rs777742707 1806 dbSNP
rs544415261 1811 dbSNP
rs4896011 1814 dbSNP
rs1038972831 1818 dbSNP
rs1300896914 1823 dbSNP
rs905771836 1825 dbSNP
rs1375565287 1830 dbSNP
rs569339949 1831 dbSNP
rs538328308 1834 dbSNP
rs1001980280 1835 dbSNP
rs376564262 1843 dbSNP
rs933156063 1847 dbSNP
rs957714510 1850 dbSNP
rs988828631 1851 dbSNP
rs1052011892 1855 dbSNP
rs1373216449 1861 dbSNP
rs886257529 1869 dbSNP
rs1419333616 1874 dbSNP
rs1409453130 1875 dbSNP
rs1451941319 1880 dbSNP
rs1020429024 1891 dbSNP
rs6569917 1894 dbSNP
rs373158959 1895 dbSNP
rs987022034 1899 dbSNP
rs751462675 1900 dbSNP
rs1258221274 1907 dbSNP
rs1240000782 1908 dbSNP
rs1212718862 1910 dbSNP
rs1484598783 1917 dbSNP
rs767169399 1919 dbSNP
rs1349676423 1945 dbSNP
rs942965291 1947 dbSNP
rs1304939944 1948 dbSNP
rs752153374 1952 dbSNP
rs920263382 1957 dbSNP
rs1227932696 1978 dbSNP
rs755648508 1984 dbSNP
rs1295704863 1986 dbSNP
rs1413496739 1988 dbSNP
rs1289820406 1989 dbSNP
rs190126374 1989 dbSNP
rs1453946901 1990 dbSNP
rs1346657741 1997 dbSNP
rs886279305 2000 dbSNP
rs1461403913 2003 dbSNP
rs1202529601 2013 dbSNP
rs1240704188 2019 dbSNP
rs1420570059 2020 dbSNP
rs183370751 2032 dbSNP
rs150060269 2033 dbSNP
rs1474204753 2035 dbSNP
rs905798513 2042 dbSNP
rs1179233149 2043 dbSNP
rs749805275 2047 dbSNP
rs1208162800 2049 dbSNP
rs1335494837 2056 dbSNP
rs978285168 2057 dbSNP
rs187540350 2058 dbSNP
rs779814211 2067 dbSNP
rs1001445422 2069 dbSNP
rs1296724335 2074 dbSNP
rs974380334 2080 dbSNP
rs1033440195 2083 dbSNP
rs1363598051 2091 dbSNP
rs1318195458 2098 dbSNP
rs921866173 2098 dbSNP
rs1433938339 2102 dbSNP
rs538210350 2104 dbSNP
rs1166476286 2110 dbSNP
rs1459794946 2135 dbSNP
rs1367886686 2137 dbSNP
rs192813487 2138 dbSNP
rs1430131782 2140 dbSNP
rs1259426244 2146 dbSNP
rs1010280094 2147 dbSNP
rs987394380 2150 dbSNP
rs757626343 2157 dbSNP
rs1254902753 2158 dbSNP
rs955451345 2160 dbSNP
rs1211967294 2167 dbSNP
rs1356256632 2174 dbSNP
rs182599120 2184 dbSNP
rs1284927243 2187 dbSNP
rs986971425 2187 dbSNP
rs1227131875 2192 dbSNP
rs940494074 2195 dbSNP
rs578035099 2200 dbSNP
rs1038197687 2204 dbSNP
rs202229535 2206 dbSNP
rs1384605097 2208 dbSNP
rs1389894203 2210 dbSNP
rs1222811616 2213 dbSNP
rs1018427586 2214 dbSNP
rs386706069 2215 dbSNP
rs9385672 2216 dbSNP
rs6932322 2218 dbSNP
rs1196034791 2223 dbSNP
rs1388016303 2232 dbSNP
rs1167738854 2234 dbSNP
rs527696896 2234 dbSNP
rs1454864077 2240 dbSNP
rs1397194970 2244 dbSNP
rs1191796533 2247 dbSNP
rs1251369243 2252 dbSNP
rs1451158414 2252 dbSNP
rs1249327958 2256 dbSNP
rs1479948498 2258 dbSNP
rs776574149 2261 dbSNP
rs549254198 2262 dbSNP
rs895807783 2263 dbSNP
rs1348112909 2274 dbSNP
rs747055339 2275 dbSNP
rs1305236886 2278 dbSNP
rs1014952890 2280 dbSNP
rs768907311 2284 dbSNP
rs1430390452 2292 dbSNP
rs983106275 2292 dbSNP
rs561189283 2293 dbSNP
rs1020533187 2294 dbSNP
rs918998799 2296 dbSNP
rs907663947 2310 dbSNP
rs1480428236 2312 dbSNP
rs1377481976 2320 dbSNP
rs1170988154 2324 dbSNP
rs1364393413 2327 dbSNP
rs1184096359 2329 dbSNP
rs1174895089 2334 dbSNP
rs574935735 2337 dbSNP
rs113737422 2340 dbSNP
rs1212010533 2346 dbSNP
rs531500673 2349 dbSNP
rs905667006 2357 dbSNP
rs149028627 2361 dbSNP
rs1032108159 2362 dbSNP
rs1198306741 2372 dbSNP
rs1343868465 2375 dbSNP
rs868782953 2376 dbSNP
rs1260787365 2382 dbSNP
rs1348524702 2385 dbSNP
rs957753682 2385 dbSNP
rs974473721 2385 dbSNP
rs1415348868 2388 dbSNP
rs762868202 2389 dbSNP
rs1054342239 2394 dbSNP
rs893133951 2397 dbSNP
rs1028694282 2398 dbSNP
rs954396965 2399 dbSNP
rs987794899 2411 dbSNP
rs1010227591 2420 dbSNP
rs1189213595 2423 dbSNP
rs1345910980 2431 dbSNP
rs560812020 2433 dbSNP
rs1299036780 2435 dbSNP
rs1441480533 2442 dbSNP
rs1308775435 2443 dbSNP
rs907749629 2449 dbSNP
rs1206362405 2452 dbSNP
rs1041700468 2453 dbSNP
rs1266975866 2468 dbSNP
rs1233755818 2472 dbSNP
rs940530565 2475 dbSNP
rs1403211494 2482 dbSNP
rs1224233612 2484 dbSNP
rs766342732 2485 dbSNP
rs1447105647 2497 dbSNP
rs761680616 2499 dbSNP
rs1327222808 2500 dbSNP
rs1320476583 2501 dbSNP
rs1433203984 2507 dbSNP
rs973187959 2512 dbSNP
rs1008254339 2513 dbSNP
rs368116502 2528 dbSNP
rs1490269023 2529 dbSNP
rs773958562 2535 dbSNP
rs759397568 2555 dbSNP
rs767112263 2558 dbSNP
rs143093220 2559 dbSNP
rs1429598739 2566 dbSNP
rs573949468 2570 dbSNP
rs1169890473 2577 dbSNP
rs1244217673 2584 dbSNP
rs1190065215 2585 dbSNP
rs187571907 2588 dbSNP
rs1426865705 2589 dbSNP
rs147803481 2599 dbSNP
rs1027270224 2605 dbSNP
rs1469763798 2609 dbSNP
rs1287699814 2616 dbSNP
rs1164382057 2627 dbSNP
rs866868076 2631 dbSNP
rs1339777594 2634 dbSNP
rs1271716618 2654 dbSNP
rs1365979343 2656 dbSNP
rs1423714384 2659 dbSNP
rs562737699 2663 dbSNP
rs1042369719 2665 dbSNP
rs1364033884 2666 dbSNP
rs907524874 2670 dbSNP
rs1443245233 2672 dbSNP
rs1348626010 2674 dbSNP
rs1323423515 2677 dbSNP
rs971148827 2689 dbSNP
rs981189957 2694 dbSNP
rs1167117949 2696 dbSNP
rs1054654027 2701 dbSNP
rs1389240881 2705 dbSNP
rs1193683080 2706 dbSNP
rs1489145484 2719 dbSNP
rs568461592 2722 dbSNP
rs763649957 2723 dbSNP
rs1438339799 2727 dbSNP
rs937156581 2730 dbSNP
rs114865552 2734 dbSNP
rs1202840787 2738 dbSNP
rs757650520 2739 dbSNP
rs750510543 2741 dbSNP
rs41286220 2742 dbSNP
rs1236801482 2743 dbSNP
rs1359203371 2744 dbSNP
rs1041731784 2747 dbSNP
rs1443493439 2751 dbSNP
rs3734280 2751 dbSNP
rs1008730067 2754 dbSNP
rs538522345 2755 dbSNP
rs117794725 2756 dbSNP
rs1429562683 2760 dbSNP
rs1376464565 2762 dbSNP
rs962010322 2764 dbSNP
rs568502416 2776 dbSNP
rs146986097 2787 dbSNP
rs554603371 2788 dbSNP
rs1259753379 2794 dbSNP
rs1446462365 2803 dbSNP
rs1184468840 2804 dbSNP
rs973280543 2810 dbSNP
rs547184302 2814 dbSNP
rs958528706 2819 dbSNP
rs1027547989 2821 dbSNP
rs951636485 2831 dbSNP
rs1384803650 2836 dbSNP
rs3734281 2840 dbSNP
rs374340772 2840 dbSNP
rs747296549 2841 dbSNP
rs767792171 2844 dbSNP
rs981606646 2845 dbSNP
rs1409776977 2849 dbSNP
rs540788044 2853 dbSNP
rs958698535 2854 dbSNP
rs990025260 2859 dbSNP
rs1315195821 2866 dbSNP
rs914394780 2868 dbSNP
rs1357136155 2872 dbSNP
rs945982595 2873 dbSNP
rs1400831932 2878 dbSNP
rs1413561929 2882 dbSNP
rs1041595721 2884 dbSNP
rs912569297 2885 dbSNP
rs1257896485 2888 dbSNP
rs944084772 2891 dbSNP
rs1183444603 2894 dbSNP
rs1381654046 2897 dbSNP
rs1237164338 2911 dbSNP
rs936269620 2914 dbSNP
rs776782553 2915 dbSNP
rs748270165 2917 dbSNP
rs1331271438 2924 dbSNP
rs3734282 2925 dbSNP
rs9493755 2927 dbSNP
rs1336182340 2928 dbSNP
rs555602758 2929 dbSNP
rs1048606453 2931 dbSNP
rs1215726047 2932 dbSNP
rs1050184746 2936 dbSNP
rs1301848206 2942 dbSNP
rs887249527 2949 dbSNP
rs1004471172 2951 dbSNP
rs1025197863 2954 dbSNP
rs927638633 2959 dbSNP
rs1390117919 2960 dbSNP
rs938891219 2970 dbSNP
rs1156337322 2973 dbSNP
rs150164514 2974 dbSNP
rs1418575114 2981 dbSNP
rs573977449 2999 dbSNP
rs906775690 2999 dbSNP
rs1002583146 3000 dbSNP
rs1466429661 3005 dbSNP
rs1034412357 3012 dbSNP
rs958512109 3014 dbSNP
rs990280250 3019 dbSNP
rs994750999 3031 dbSNP
rs1267805377 3042 dbSNP
rs1243280223 3059 dbSNP
rs1419390891 3063 dbSNP
rs1321457582 3068 dbSNP
rs373390786 3076 dbSNP
rs538177622 3081 dbSNP
rs1470903516 3082 dbSNP
rs531700932 3084 dbSNP
rs541877223 3086 dbSNP
rs1391341390 3092 dbSNP
rs1295170976 3098 dbSNP
rs767349074 3100 dbSNP
rs975467151 3105 dbSNP
rs753979150 3109 dbSNP
rs971531365 3110 dbSNP
rs1454727664 3117 dbSNP
rs1269598719 3118 dbSNP
rs556717420 3122 dbSNP
rs562175861 3130 dbSNP
rs921234782 3131 dbSNP
rs1252241278 3134 dbSNP
rs931433247 3141 dbSNP
rs578140622 3142 dbSNP
rs1223541280 3143 dbSNP
rs868683371 3150 dbSNP
rs887282053 3151 dbSNP
rs935986966 3154 dbSNP
rs138169502 3161 dbSNP
rs1326336898 3168 dbSNP
rs1046599880 3174 dbSNP
rs906809379 3184 dbSNP
rs547896631 3186 dbSNP
rs1431450702 3187 dbSNP
rs1201295252 3190 dbSNP
rs1002857534 3192 dbSNP
rs1168152081 3194 dbSNP
rs1435578394 3201 dbSNP
rs1224645037 3205 dbSNP
rs1196922634 3208 dbSNP
rs921485989 3209 dbSNP
rs58852212 3210 dbSNP
rs1034033419 3211 dbSNP
rs1288852083 3211 dbSNP
rs1307196521 3211 dbSNP
rs1411618701 3211 dbSNP
rs141939054 3211 dbSNP
rs768539256 3211 dbSNP
rs796370193 3211 dbSNP
rs932821865 3211 dbSNP
rs1206903691 3213 dbSNP
rs1233617211 3214 dbSNP
rs894111836 3215 dbSNP
rs1480854003 3216 dbSNP
rs1011286117 3217 dbSNP
rs1412826178 3219 dbSNP
rs1465652789 3219 dbSNP
rs1409469698 3220 dbSNP
rs1021361566 3221 dbSNP
rs1176988808 3223 dbSNP
rs967096705 3224 dbSNP
rs1251523942 3225 dbSNP
rs1189170714 3227 dbSNP
rs1442607340 3229 dbSNP
rs1257892196 3232 dbSNP
rs1198391488 3243 dbSNP
rs977247766 3269 dbSNP
rs1343618085 3288 dbSNP
rs763752161 3290 dbSNP
rs1428006724 3295 dbSNP
rs1327067410 3296 dbSNP
rs1287486526 3305 dbSNP
rs1412220138 3307 dbSNP
rs1051293265 3311 dbSNP
rs1332384257 3313 dbSNP
rs753239602 3316 dbSNP
rs891275001 3320 dbSNP
rs560474550 3323 dbSNP
rs1389387805 3338 dbSNP
rs566325526 3357 dbSNP
rs965336144 3359 dbSNP
rs1322707840 3366 dbSNP
rs1456104290 3367 dbSNP
rs1411924540 3370 dbSNP
rs944506220 3371 dbSNP
rs1036517766 3373 dbSNP
rs1473949926 3380 dbSNP
rs975711313 3404 dbSNP
rs1027541982 3410 dbSNP
rs1460608423 3417 dbSNP
rs1248091339 3418 dbSNP
rs1210124759 3420 dbSNP
rs1463466132 3424 dbSNP
rs894374099 3426 dbSNP
rs921277769 3432 dbSNP
rs532214495 3438 dbSNP
rs984114226 3440 dbSNP
rs1306624022 3444 dbSNP
rs1244266753 3445 dbSNP
rs761418590 3448 dbSNP
rs545445132 3449 dbSNP
rs9402547 3452 dbSNP
rs1388023635 3453 dbSNP
rs1046630217 3457 dbSNP
rs1324736275 3464 dbSNP
rs1407579022 3470 dbSNP
rs1388950952 3473 dbSNP
rs1443628066 3475 dbSNP
rs867708707 3475 dbSNP
rs938296736 3477 dbSNP
rs1447081084 3478 dbSNP
rs1216361677 3482 dbSNP
rs1222135135 3484 dbSNP
rs1055748024 3485 dbSNP
rs1273763854 3488 dbSNP
rs1307192950 3491 dbSNP
rs1203279616 3496 dbSNP
rs1032136351 3499 dbSNP
rs192573328 3500 dbSNP
rs149557088 3509 dbSNP
rs1226502115 3512 dbSNP
rs1200091888 3515 dbSNP
rs144220064 3518 dbSNP
rs902967096 3519 dbSNP
rs987451241 3523 dbSNP
rs998531198 3524 dbSNP
rs912768639 3526 dbSNP
rs1430856181 3531 dbSNP
rs1372822978 3535 dbSNP
rs9389114 3536 dbSNP
rs1419590524 3538 dbSNP
rs1427433059 3542 dbSNP
rs1428778051 3547 dbSNP
rs755190301 3550 dbSNP
rs1418099738 3555 dbSNP
rs1191333873 3562 dbSNP
rs531633783 3563 dbSNP
rs17063128 3565 dbSNP
rs1367860503 3567 dbSNP
rs1244956903 3569 dbSNP
rs897552429 3580 dbSNP
rs996783262 3585 dbSNP
rs1276514957 3587 dbSNP
rs1203213568 3588 dbSNP
rs1279417434 3602 dbSNP
rs1221055418 3604 dbSNP
rs1343465997 3618 dbSNP
rs1274730540 3621 dbSNP
rs1411009608 3624 dbSNP
rs1352646683 3625 dbSNP
rs1306580651 3629 dbSNP
rs1303113426 3638 dbSNP
rs1353596900 3643 dbSNP
rs1329898997 3645 dbSNP
rs1433476794 3649 dbSNP
rs1415633554 3651 dbSNP
rs184242531 3657 dbSNP
rs952658184 3668 dbSNP
rs894135229 3674 dbSNP
rs1480412498 3675 dbSNP
rs1012873260 3682 dbSNP
rs1024641881 3687 dbSNP
rs984146762 3692 dbSNP
rs781495921 3693 dbSNP
rs1262620968 3708 dbSNP
rs546431763 3713 dbSNP
rs1229495514 3714 dbSNP
rs908532452 3724 dbSNP
rs1286809789 3726 dbSNP
rs961469309 3734 dbSNP
rs1380370902 3736 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gggaaggagGAGGGGUCCGGCu 5'
                   ||:| |:||: | 
Target 5' -------cgCUUCGCGGGUGGa 3'
 		1 - 15
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000367882.4 | 3UTR | CGCUUCGCGGGUGGAGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
144 hsa-miR-7107-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT060580 CCND1 cyclin D1 2 4
MIRT451035 ZNF610 zinc finger protein 610 2 2
MIRT485711 CASP16 caspase 16, pseudogene 2 8
MIRT488402 TDRKH tudor and KH domain containing 2 2
MIRT492084 TCF21 transcription factor 21 2 2
MIRT504213 VAV3 vav guanine nucleotide exchange factor 3 2 13
MIRT505723 SERTAD3 SERTA domain containing 3 2 4
MIRT509007 FBXO6 F-box protein 6 2 2
MIRT509843 FOS Fos proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT514761 RBM4B RNA binding motif protein 4B 2 2
MIRT515664 LRRC27 leucine rich repeat containing 27 2 2
MIRT516316 F8A2 coagulation factor VIII associated 2 2 2
MIRT516342 F8A3 coagulation factor VIII associated 3 2 2
MIRT517139 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT518746 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519299 MLH1 mutL homolog 1 2 2
MIRT521527 QSOX1 quiescin sulfhydryl oxidase 1 2 4
MIRT531756 TXK TXK tyrosine kinase 2 2
MIRT542208 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542235 FUT9 fucosyltransferase 9 2 2
MIRT542791 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT554378 SETD5 SET domain containing 5 2 2
MIRT569908 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570222 SLC27A1 solute carrier family 27 member 1 2 2
MIRT570976 RGS19 regulator of G protein signaling 19 2 2
MIRT573046 SHMT1 serine hydroxymethyltransferase 1 2 2
MIRT574954 Vav3 vav 3 oncogene 2 8
MIRT609297 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT612990 GBX2 gastrulation brain homeobox 2 2 2
MIRT613851 SHB SH2 domain containing adaptor protein B 2 2
MIRT613935 POLR3A RNA polymerase III subunit A 2 2
MIRT614243 WDR53 WD repeat domain 53 2 4
MIRT615158 SPIB Spi-B transcription factor 2 2
MIRT616145 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT616389 C1orf87 chromosome 1 open reading frame 87 2 2
MIRT617737 ATCAY ATCAY, caytaxin 2 4
MIRT621449 TCN2 transcobalamin 2 2 2
MIRT625784 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT628556 MELK maternal embryonic leucine zipper kinase 2 2
MIRT632041 ZNF430 zinc finger protein 430 2 2
MIRT634937 GTF2H2C GTF2H2 family member C 2 4
MIRT637208 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT637610 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT637832 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638107 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT638387 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT641689 SPCS1 signal peptidase complex subunit 1 2 2
MIRT642611 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643850 LACTB lactamase beta 2 4
MIRT649575 PALD1 phosphatase domain containing, paladin 1 2 2
MIRT649860 WDR12 WD repeat domain 12 2 2
MIRT651026 ZNF699 zinc finger protein 699 2 2
MIRT652336 TMOD3 tropomodulin 3 2 4
MIRT653286 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 2 2
MIRT656292 METTL14 methyltransferase like 14 2 2
MIRT656458 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT659539 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT661537 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT668042 GTPBP10 GTP binding protein 10 2 2
MIRT668147 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT668800 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT669818 STOML1 stomatin like 1 2 2
MIRT670490 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670615 NPHP1 nephrocystin 1 2 2
MIRT670892 CYTIP cytohesin 1 interacting protein 2 2
MIRT670943 LIPG lipase G, endothelial type 2 2
MIRT671268 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT671903 GBP4 guanylate binding protein 4 2 2
MIRT672239 ABHD15 abhydrolase domain containing 15 2 2
MIRT672326 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT673113 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT674412 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT677718 IRF1 interferon regulatory factor 1 2 2
MIRT678585 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 2
MIRT678726 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT679338 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT679614 RRP36 ribosomal RNA processing 36 2 2
MIRT679695 SLC1A5 solute carrier family 1 member 5 2 4
MIRT679715 RPL24 ribosomal protein L24 2 2
MIRT680065 CD96 CD96 molecule 2 2
MIRT683379 ESR2 estrogen receptor 2 2 2
MIRT683683 MICA MHC class I polypeptide-related sequence A 2 2
MIRT683865 OCIAD1 OCIA domain containing 1 2 2
MIRT684073 TLR7 toll like receptor 7 2 2
MIRT684126 CEP104 centrosomal protein 104 2 2
MIRT684485 GPR137B G protein-coupled receptor 137B 2 2
MIRT684736 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT684778 MYO1F myosin IF 2 2
MIRT685028 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT685189 DCTN5 dynactin subunit 5 2 2
MIRT685307 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT685514 MSH3 mutS homolog 3 2 2
MIRT685702 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT685944 PTGIS prostaglandin I2 synthase 2 2
MIRT686311 VPS53 VPS53, GARP complex subunit 2 2
MIRT686686 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT687641 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT687923 HOOK3 hook microtubule tethering protein 3 2 2
MIRT688117 GEMIN8 gem nuclear organelle associated protein 8 2 2
MIRT688460 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT688629 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT688823 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT689117 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT689166 ZNF665 zinc finger protein 665 2 2
MIRT690070 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT690733 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT691324 KIAA1841 KIAA1841 2 2
MIRT691517 ZNF682 zinc finger protein 682 2 2
MIRT691607 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT692314 RFK riboflavin kinase 2 2
MIRT692376 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT692436 METTL8 methyltransferase like 8 2 2
MIRT692782 SYNPO2L synaptopodin 2 like 2 2
MIRT693136 THEM4 thioesterase superfamily member 4 2 2
MIRT693422 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT693871 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT694049 PRIM1 DNA primase subunit 1 2 2
MIRT694092 KIAA0930 KIAA0930 2 2
MIRT694190 ZNF347 zinc finger protein 347 2 2
MIRT695177 SLC25A33 solute carrier family 25 member 33 2 2
MIRT696180 GNB5 G protein subunit beta 5 2 2
MIRT697387 ZMAT3 zinc finger matrin-type 3 2 2
MIRT698924 SPEM1 spermatid maturation 1 2 2
MIRT699314 SLC35F5 solute carrier family 35 member F5 2 4
MIRT701106 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT701575 MYPN myopalladin 2 2
MIRT701825 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT702047 METTL21A methyltransferase like 21A 2 2
MIRT703034 HAS2 hyaluronan synthase 2 2 4
MIRT704143 DNAL1 dynein axonemal light chain 1 2 2
MIRT704759 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT705079 C4orf29 abhydrolase domain containing 18 2 2
MIRT705346 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706104 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT709070 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT709534 ZBED1 zinc finger BED-type containing 1 2 2
MIRT712356 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT713713 PAOX polyamine oxidase 2 2
MIRT714304 ZNF454 zinc finger protein 454 2 2
MIRT714919 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT715792 TBL3 transducin beta like 3 2 2
MIRT717376 RBM41 RNA binding motif protein 41 2 2
MIRT719069 ACOX1 acyl-CoA oxidase 1 2 2
MIRT724548 HAUS2 HAUS augmin like complex subunit 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-7107-5p Docetaxel 148124 NSC628503 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-7107-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-7107-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-7107-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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