pre-miRNA Information
pre-miRNA hsa-mir-1185-1   
Genomic Coordinates chr14: 101042977 - 101043062
Synonyms MIRN1185-1, hsa-mir-1185-1, MIR1185-1
Description Homo sapiens miR-1185-1 stem-loop
Comment This sequence was proposed as a miRNA candidate by Berezikov et al by RAKE analysis .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1185-1-3p
Sequence 53| AUAUACAGGGGGAGACUCUUAU |74
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 5 14 + 101043033 29233923 MiREDiBase
A-to-I 7 14 + 101043035 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs749794228 1 dbSNP
rs369414498 4 dbSNP
rs771096180 5 dbSNP
rs774958411 7 dbSNP
rs1226171972 11 dbSNP
rs1449899083 14 dbSNP
rs761183893 16 dbSNP
rs1380874583 20 dbSNP
rs771625921 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MTFR1   
Synonyms CHPPR, FAM54A2
Description mitochondrial fission regulator 1
Transcript NM_001145838   
Other Transcripts NM_001145839 , NM_014637   
Expression
Putative miRNA Targets on MTFR1
3'UTR of MTFR1
(miRNA target sites are highlighted)
>MTFR1|NM_001145838|3'UTR
   1 TAGACAATGAGCTGCGAAAAGACTCCTGGTTCCCCTGTTGATTTGTGAGGGCCAAGTTTGCTAGTAGAAATCGACACTGT
  81 TTAGTAAATACCTCTTTAGTATTCAGTGGTCTTCTTTTCAGGCTAATTAGTGGATTAAGCAATAATGAAAGCACTAAGTT
 161 TGGTTTTGCTTTTGTGAGATGGTCAGCTTTGGTGCTCTCCACAACATGTGTGTTCTGACATGTTTCTAATATGTGGCCAG
 241 GGCGTTCAGATTTCCAGTTTTGAAAACAATTGTATAGATTTCACAACACAAAAAGGACATTTGTGGATGTTACTGCACAT
 321 TTTAAATTCTTAACACTAATTTATCTGTATAAGTGTTTTATATGCATATTTTTGGACATAAACAGTTTATGTAAAATTAG
 401 TAATGAATGATGGCAACGAGGGCACTGTTATCTTCGTTTGTTTTCAATGATCATTTAGCATTCAATGATGGAACAGCTGG
 481 TATAACATAAGTTGTTGGCATGAAATATTTGAGATTGGAAACTTCTTGCCTTGAACAGAACTTATATCTTAGATTCTCTC
 561 TCACATTTTCTTGGAGCTGGGGTTTGAATAGGAACCAGATGATGTTCACTGCTGAAATTCCATAATGCTTCCCATTGAAG
 641 GGAAGTTGAGAACCAGGAAAGCTGCTTTCACGTCATTGCCATCCAGTACTGACAGGGAAGAAAGATGTAGTTTTCCAGTA
 721 GTGATGAATCAAATTATTGAATTAAATTTCTTCTTAAGAAGTAAAAACTCAGAATGTACCATCTTGTTTCCTTTCAGTTT
 801 ATTAAATGGCATCATAAAGATGACTTTGCTAAGTTAATAGAGTTAAAAATTTTTTTAATATAAGCCAAAATATTAACTTT
 881 AATGAAACATTGACTTGGCAAATGAATTTCCTATAAATTATCATTGGTCAGAATGCTGTTTTGTTTAATAATATTACGCA
 961 ACATAAACCATAGGTGTTATTAGAAGTGGAGAACTGCCTTTTTCATCTGGGGCTTTTAAGGACTTGCTATAAATGATTAT
1041 TTTTTAAATGCTTTATAAATCTTCATGGTTTTTCTATTTCTGATACACTCAGCTATAGTTAATACCAGAGTATCCTACCA
1121 GGAGTAATATTTGGAATATTTAAATCTAGTAAAAGAAGAAAGTTGTACTTCCTGGCTGGGAGTATTAGGAGATGGGAGTA
1201 GAGATTCACTTTTAAGTTCTTGAAAATATATGCATTCTCCTAAATATTAACAAAAATGATTTGGGGAAATGACATGGCTT
1281 GATTGTTCTGTTTAAATTTGTACTGTGGCTTATGTTACACATGTTCATGTTCACCTCTCATTCACCTGTTTTATATGGTT
1361 TAAAATTCTCTTTAACAAAATTCAGAAAATTCACCTGAAACGTATTTTGACCTAAAAGAAACATATTTTTGTATCAGTAT
1441 TGAATTTTGGACAGTGCCCCCATATAAGGAAGTTACTGTTTTAAAATAAAGCAAACTAACTGTTTTATTTTCCTTGGACA
1521 AAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaUUCUCA-GAGGGGGACAUAUa 5'
            || | |  |:: :||||||| 
Target 5' ttAACACTAATTTATCTGTATAa 3'
330 - 352 148.00 -7.60
2
miRNA  3' uauucUCAGAG-----GGGGACAUAUa 5'
               |||:|:     |  :|||||| 
Target 5' tttccAGTTTTGAAAACAATTGTATAg 3'
251 - 277 129.00 -7.00
3
miRNA  3' uaUUCUCAG-AGGGGGACAUAua 5'
            ||||  | | ::::|||||  
Target 5' aaAAGAAACATATTTTTGTATca 3'
1414 - 1436 120.00 -5.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31501521 6 COSMIC
COSN14349597 17 COSMIC
COSN30470457 34 COSMIC
COSN31610689 86 COSMIC
COSN31540433 100 COSMIC
COSN30101345 112 COSMIC
COSN31605209 115 COSMIC
COSN30152866 134 COSMIC
COSN30163654 156 COSMIC
COSN30121380 270 COSMIC
COSN17075728 628 COSMIC
COSN31596658 712 COSMIC
COSN22018014 727 COSMIC
COSN31519912 751 COSMIC
COSN31575646 782 COSMIC
COSN9666005 990 COSMIC
COSN31529532 1350 COSMIC
COSN31483237 1398 COSMIC
COSN1367179 1479 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs536677940 2 dbSNP
rs753757740 5 dbSNP
rs757212095 6 dbSNP
rs1295702544 9 dbSNP
rs1357809545 16 dbSNP
rs369891429 17 dbSNP
rs1271832396 26 dbSNP
rs548274053 29 dbSNP
rs1250688403 30 dbSNP
rs754547375 35 dbSNP
rs943706233 46 dbSNP
rs1262237721 52 dbSNP
rs758268477 53 dbSNP
rs1316218621 66 dbSNP
rs540492538 67 dbSNP
rs1030190657 73 dbSNP
rs1199331269 78 dbSNP
rs1373272667 78 dbSNP
rs954595393 96 dbSNP
rs781565476 100 dbSNP
rs1260027283 108 dbSNP
rs1040776858 125 dbSNP
rs899559961 132 dbSNP
rs76100380 133 dbSNP
rs1027255825 140 dbSNP
rs536901475 142 dbSNP
rs908516534 143 dbSNP
rs888271770 144 dbSNP
rs1360378202 154 dbSNP
rs1004568456 155 dbSNP
rs1174832646 159 dbSNP
rs1183596470 164 dbSNP
rs558724809 169 dbSNP
rs1015517420 174 dbSNP
rs1428719252 190 dbSNP
rs1477237304 192 dbSNP
rs1263437102 196 dbSNP
rs1184517097 198 dbSNP
rs1487841484 199 dbSNP
rs970719800 203 dbSNP
rs1280884650 206 dbSNP
rs1212931588 207 dbSNP
rs982073406 208 dbSNP
rs940016781 213 dbSNP
rs1170795222 219 dbSNP
rs974150139 222 dbSNP
rs1033776437 237 dbSNP
rs920003741 238 dbSNP
rs959699239 244 dbSNP
rs372795383 245 dbSNP
rs948831332 255 dbSNP
rs1340281474 266 dbSNP
rs1226072257 268 dbSNP
rs1044530013 273 dbSNP
rs1374220672 282 dbSNP
rs907394435 283 dbSNP
rs80330597 287 dbSNP
rs945557068 299 dbSNP
rs534805902 300 dbSNP
rs1374370162 302 dbSNP
rs1296945271 308 dbSNP
rs1340477299 314 dbSNP
rs773898115 320 dbSNP
rs1053785531 330 dbSNP
rs759065702 337 dbSNP
rs1257929600 340 dbSNP
rs1189862261 342 dbSNP
rs1280180975 344 dbSNP
rs553130336 347 dbSNP
rs1321434781 350 dbSNP
rs1340173817 350 dbSNP
rs1217025617 356 dbSNP
rs1253206913 356 dbSNP
rs943716141 359 dbSNP
rs1294266757 363 dbSNP
rs1235551285 367 dbSNP
rs1021328347 382 dbSNP
rs13256065 383 dbSNP
rs1391406383 384 dbSNP
rs574566148 395 dbSNP
rs749950956 397 dbSNP
rs1295987936 400 dbSNP
rs1442830621 411 dbSNP
rs1040660893 418 dbSNP
rs541335021 418 dbSNP
rs771528993 419 dbSNP
rs1367766961 425 dbSNP
rs932419877 434 dbSNP
rs1182424539 436 dbSNP
rs200481460 436 dbSNP
rs541822842 437 dbSNP
rs751164828 438 dbSNP
rs775008193 448 dbSNP
rs371814432 453 dbSNP
rs796173467 453 dbSNP
rs888316540 459 dbSNP
rs1030139649 466 dbSNP
rs1004010327 470 dbSNP
rs1015527284 471 dbSNP
rs1240353004 472 dbSNP
rs138685134 475 dbSNP
rs375295862 481 dbSNP
rs1317646309 482 dbSNP
rs1425161450 488 dbSNP
rs1015263596 489 dbSNP
rs1394685290 489 dbSNP
rs963359093 496 dbSNP
rs1171699284 497 dbSNP
rs1389746061 506 dbSNP
rs3763513 514 dbSNP
rs919957288 516 dbSNP
rs543719110 522 dbSNP
rs1157266327 531 dbSNP
rs1360218154 541 dbSNP
rs1439168623 542 dbSNP
rs948778826 545 dbSNP
rs545938638 552 dbSNP
rs1401161838 555 dbSNP
rs980176671 559 dbSNP
rs1206116340 564 dbSNP
rs1300572664 581 dbSNP
rs1353420525 582 dbSNP
rs1329487440 591 dbSNP
rs565230085 597 dbSNP
rs938863855 607 dbSNP
rs1371078758 624 dbSNP
rs1305082870 629 dbSNP
rs959388257 637 dbSNP
rs1053327810 638 dbSNP
rs1318664392 643 dbSNP
rs892037777 645 dbSNP
rs1347426498 647 dbSNP
rs1358473793 648 dbSNP
rs755819769 656 dbSNP
rs947683893 669 dbSNP
rs1435326130 671 dbSNP
rs1011442250 672 dbSNP
rs1022378458 673 dbSNP
rs967285107 677 dbSNP
rs1283625218 686 dbSNP
rs1246378418 688 dbSNP
rs1352635513 692 dbSNP
rs556832686 707 dbSNP
rs1217320962 710 dbSNP
rs1265237953 720 dbSNP
rs1449114516 722 dbSNP
rs1043101308 727 dbSNP
rs1216517764 731 dbSNP
rs978198166 738 dbSNP
rs141123968 743 dbSNP
rs754605385 745 dbSNP
rs1478810584 748 dbSNP
rs1270410907 749 dbSNP
rs1432565777 755 dbSNP
rs1297423824 756 dbSNP
rs1338130921 756 dbSNP
rs995901959 757 dbSNP
rs1051511335 760 dbSNP
rs1178278927 764 dbSNP
rs890259073 773 dbSNP
rs754695815 775 dbSNP
rs1424654634 776 dbSNP
rs1176339353 780 dbSNP
rs185716284 780 dbSNP
rs1380138805 782 dbSNP
rs1193454582 790 dbSNP
rs1486255739 792 dbSNP
rs1260262948 839 dbSNP
rs753663368 841 dbSNP
rs1014784267 843 dbSNP
rs1273166494 845 dbSNP
rs966288785 850 dbSNP
rs974950294 851 dbSNP
rs1277280219 852 dbSNP
rs1233710222 857 dbSNP
rs1405237569 857 dbSNP
rs1240393563 861 dbSNP
rs920961562 866 dbSNP
rs1301027765 873 dbSNP
rs1203632849 874 dbSNP
rs1324317464 883 dbSNP
rs1485831510 885 dbSNP
rs932330262 891 dbSNP
rs559455469 905 dbSNP
rs1048620947 909 dbSNP
rs1467360832 913 dbSNP
rs1444855774 916 dbSNP
rs1308782192 921 dbSNP
rs1170360057 922 dbSNP
rs1421784369 922 dbSNP
rs1375958901 924 dbSNP
rs1240559516 927 dbSNP
rs1416512025 932 dbSNP
rs1262468624 946 dbSNP
rs747890317 946 dbSNP
rs1232920223 948 dbSNP
rs796400449 950 dbSNP
rs67514002 958 dbSNP
rs980124243 967 dbSNP
rs928717285 969 dbSNP
rs1336658951 972 dbSNP
rs548565746 977 dbSNP
rs1227647106 983 dbSNP
rs1374035701 984 dbSNP
rs1036840986 990 dbSNP
rs1280158710 992 dbSNP
rs1449126705 996 dbSNP
rs1176467501 1012 dbSNP
rs1330944162 1017 dbSNP
rs1462217165 1037 dbSNP
rs765245724 1041 dbSNP
rs1003491393 1049 dbSNP
rs1423718302 1060 dbSNP
rs1440752076 1062 dbSNP
rs1055044118 1067 dbSNP
rs1043345494 1068 dbSNP
rs921558774 1069 dbSNP
rs1237097047 1071 dbSNP
rs577439126 1075 dbSNP
rs931642403 1075 dbSNP
rs190568640 1078 dbSNP
rs1010871249 1079 dbSNP
rs1164283713 1089 dbSNP
rs1220587729 1096 dbSNP
rs537443024 1098 dbSNP
rs1464125514 1106 dbSNP
rs1330974935 1107 dbSNP
rs890206589 1108 dbSNP
rs1374741456 1113 dbSNP
rs1308702188 1119 dbSNP
rs1004664868 1129 dbSNP
rs1370066268 1135 dbSNP
rs1401269488 1159 dbSNP
rs1449229807 1162 dbSNP
rs1036577663 1163 dbSNP
rs1160961323 1181 dbSNP
rs899017197 1182 dbSNP
rs1379121873 1183 dbSNP
rs182437970 1190 dbSNP
rs1434499291 1192 dbSNP
rs1264870913 1200 dbSNP
rs999668847 1206 dbSNP
rs1486078637 1211 dbSNP
rs1023517869 1212 dbSNP
rs969312967 1213 dbSNP
rs750338308 1214 dbSNP
rs966172238 1219 dbSNP
rs1235146217 1232 dbSNP
rs1314096512 1233 dbSNP
rs975002635 1235 dbSNP
rs1001490373 1237 dbSNP
rs1035675170 1249 dbSNP
rs1300479911 1257 dbSNP
rs922167995 1275 dbSNP
rs1360479815 1276 dbSNP
rs1197113450 1278 dbSNP
rs1254523190 1282 dbSNP
rs1442191724 1283 dbSNP
rs1467133078 1286 dbSNP
rs1188929660 1289 dbSNP
rs953851150 1292 dbSNP
rs1174896228 1299 dbSNP
rs758585613 1312 dbSNP
rs1428813548 1322 dbSNP
rs1425461609 1324 dbSNP
rs1370669663 1328 dbSNP
rs1487893710 1329 dbSNP
rs1258173918 1336 dbSNP
rs1201051826 1347 dbSNP
rs1484269464 1355 dbSNP
rs1254409493 1358 dbSNP
rs1476908455 1369 dbSNP
rs552550901 1371 dbSNP
rs570734993 1373 dbSNP
rs960384146 1378 dbSNP
rs1217223592 1381 dbSNP
rs1340385477 1383 dbSNP
rs780116911 1393 dbSNP
rs78999745 1396 dbSNP
rs1301305952 1402 dbSNP
rs185602483 1402 dbSNP
rs1036770561 1403 dbSNP
rs1402049442 1411 dbSNP
rs1168220147 1415 dbSNP
rs1477381225 1416 dbSNP
rs1418380787 1419 dbSNP
rs1189530680 1423 dbSNP
rs1491461062 1423 dbSNP
rs1491537303 1424 dbSNP
rs1395207768 1425 dbSNP
rs1334810107 1426 dbSNP
rs1458356495 1428 dbSNP
rs922170079 1438 dbSNP
rs752560809 1452 dbSNP
rs147125105 1460 dbSNP
rs1197075053 1462 dbSNP
rs1051415687 1468 dbSNP
rs1285222370 1469 dbSNP
rs911574727 1476 dbSNP
rs1339276021 1477 dbSNP
rs1357312781 1482 dbSNP
rs531618127 1484 dbSNP
rs1036116722 1488 dbSNP
rs1378571396 1493 dbSNP
rs939164816 1493 dbSNP
rs1328855686 1494 dbSNP
rs756132523 1494 dbSNP
rs898961365 1497 dbSNP
rs930487013 1498 dbSNP
rs201002753 1501 dbSNP
rs1443130047 1504 dbSNP
rs1186850934 1510 dbSNP
rs1440416922 1516 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000458689.2 | 3UTR | CACAUUUUAAAUUCUUAACACUAAUUUAUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
114 hsa-miR-1185-1-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066415 TBK1 TANK binding kinase 1 2 4
MIRT073567 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT074516 USP1 ubiquitin specific peptidase 1 2 4
MIRT080576 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 6
MIRT086539 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT086547 MOB4 MOB family member 4, phocein 2 2
MIRT088684 EML4 echinoderm microtubule associated protein like 4 2 4
MIRT090811 MBNL1 muscleblind like splicing regulator 1 2 4
MIRT095500 PURA purine rich element binding protein A 2 2
MIRT109530 KLHL15 kelch like family member 15 2 6
MIRT109807 ZFX zinc finger protein, X-linked 2 2
MIRT117888 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT120273 GSK3B glycogen synthase kinase 3 beta 2 4
MIRT149892 LDLR low density lipoprotein receptor 2 2
MIRT178475 LCOR ligand dependent nuclear receptor corepressor 2 4
MIRT193445 RORA RAR related orphan receptor A 2 2
MIRT198527 DSG2 desmoglein 2 2 2
MIRT226427 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT227669 SET SET nuclear proto-oncogene 2 2
MIRT320405 HOXA9 homeobox A9 2 2
MIRT407774 MRPL35 mitochondrial ribosomal protein L35 2 2
MIRT439228 ZMIZ1 zinc finger MIZ-type containing 1 1 1
MIRT439312 VAT1L vesicle amine transport 1 like 1 1
MIRT439421 TMOD1 tropomodulin 1 1 1
MIRT439446 TMEM104 transmembrane protein 104 1 1
MIRT439524 STIM2 stromal interaction molecule 2 1 1
MIRT439612 SLC29A1 solute carrier family 29 member 1 (Augustine blood group) 1 1
MIRT439997 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT440017 PCSK1 proprotein convertase subtilisin/kexin type 1 1 1
MIRT440131 NCOA4 nuclear receptor coactivator 4 1 1
MIRT440311 LRRC1 leucine rich repeat containing 1 1 1
MIRT440475 IAPP islet amyloid polypeptide 1 1
MIRT440511 HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 1 1
MIRT440617 FOXA2 forkhead box A2 1 1
MIRT440666 FBXL16 F-box and leucine rich repeat protein 16 1 1
MIRT440705 ERO1LB endoplasmic reticulum oxidoreductase 1 beta 1 1
MIRT441007 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 1 1
MIRT441018 CAND1 cullin associated and neddylation dissociated 1 1 1
MIRT441062 C1orf43 chromosome 1 open reading frame 43 1 1
MIRT441209 ARCN1 archain 1 1 1
MIRT449461 HAT1 histone acetyltransferase 1 2 2
MIRT467104 SRI sorcin 2 2
MIRT468060 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 10
MIRT468476 SESN3 sestrin 3 2 4
MIRT473533 MAX MYC associated factor X 2 2
MIRT473852 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474711 KIF13A kinesin family member 13A 2 6
MIRT481665 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 2 2
MIRT485120 SF3B3 splicing factor 3b subunit 3 2 2
MIRT493055 MTFR1 mitochondrial fission regulator 1 2 2
MIRT504258 C1orf147 chromosome 1 open reading frame 147 2 4
MIRT504361 ARID1B AT-rich interaction domain 1B 2 4
MIRT505748 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506298 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT508442 ZNF608 zinc finger protein 608 2 4
MIRT512782 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT520447 TSPAN2 tetraspanin 2 2 4
MIRT522133 NRBF2 nuclear receptor binding factor 2 2 6
MIRT522395 MYADM myeloid associated differentiation marker 2 4
MIRT523397 GRIK3 glutamate ionotropic receptor kainate type subunit 3 2 4
MIRT523938 E2F8 E2F transcription factor 8 2 4
MIRT524349 CREB1 cAMP responsive element binding protein 1 2 2
MIRT524711 BRMS1L breast cancer metastasis-suppressor 1 like 2 4
MIRT525134 ZNF256 zinc finger protein 256 2 2
MIRT525710 DCAF12L2 DDB1 and CUL4 associated factor 12 like 2 2 2
MIRT531264 PPIL3 peptidylprolyl isomerase like 3 2 2
MIRT538844 BTG1 BTG anti-proliferation factor 1 2 2
MIRT541366 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT542093 KCNK10 potassium two pore domain channel subfamily K member 10 2 6
MIRT543770 RBM12B RNA binding motif protein 12B 2 4
MIRT543940 NCOA7 nuclear receptor coactivator 7 2 2
MIRT545150 GABRG1 gamma-aminobutyric acid type A receptor gamma1 subunit 2 2
MIRT545842 ZNF264 zinc finger protein 264 2 4
MIRT548057 GOLGA7 golgin A7 2 2
MIRT549242 ATXN1L ataxin 1 like 2 4
MIRT551829 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT552484 ZNF136 zinc finger protein 136 2 2
MIRT553663 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT554988 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555760 PCTP phosphatidylcholine transfer protein 2 2
MIRT556923 IRF2BP2 interferon regulatory factor 2 binding protein 2 2 4
MIRT564991 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT566458 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT566538 PANK3 pantothenate kinase 3 2 2
MIRT567732 DLX2 distal-less homeobox 2 2 2
MIRT570081 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 2
MIRT571735 RNF11 ring finger protein 11 2 2
MIRT573529 MDM2 MDM2 proto-oncogene 2 2
MIRT574459 RPS16 ribosomal protein S16 2 2
MIRT574992 Phka1 phosphorylase kinase alpha 1 2 3
MIRT576349 Pxdn peroxidasin 2 2
MIRT610196 CD99 CD99 molecule (Xg blood group) 2 4
MIRT612920 GPRIN3 GPRIN family member 3 2 2
MIRT615021 DUSP6 dual specificity phosphatase 6 2 2
MIRT623573 IRS1 insulin receptor substrate 1 2 2
MIRT624437 CASD1 CAS1 domain containing 1 2 2
MIRT628714 ZNF585A zinc finger protein 585A 2 2
MIRT639565 PCK1 phosphoenolpyruvate carboxykinase 1 2 4
MIRT641485 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT641657 PAPOLG poly(A) polymerase gamma 2 2
MIRT642210 RUVBL2 RuvB like AAA ATPase 2 2 2
MIRT653010 STX7 syntaxin 7 2 2
MIRT656130 MSH6 mutS homolog 6 2 2
MIRT656893 KIAA2018 upstream transcription factor family member 3 2 2
MIRT660130 BRPF3 bromodomain and PHD finger containing 3 2 2
MIRT660855 AFAP1 actin filament associated protein 1 2 2
MIRT676843 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 3
MIRT681473 DIP2A disco interacting protein 2 homolog A 2 2
MIRT682253 RS1 retinoschisin 1 2 2
MIRT694296 COPB2 coatomer protein complex subunit beta 2 2 2
MIRT694401 ALDH1A3 aldehyde dehydrogenase 1 family member A3 2 2
MIRT705277 BACH1 BTB domain and CNC homolog 1 2 2
MIRT720833 C1orf52 chromosome 1 open reading frame 52 2 2
MIRT735713 SIRT1 sirtuin 1 2 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-1185-1 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-1185-1 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-1185-1-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-1185-1-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-1185-1-3p Temozolomide 5394 NSC362856 approved resistant cell line (U251)
hsa-miR-1185-1-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-1185-1-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-1185-1-3p Palbociclib 5330286 NSC758247 approved resistant cell line (T47D)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-1185-1-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-1185-1-3p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-1185-1-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (BAS)
hsa-miR-1185-1-3p Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-1185-1-3p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-1185-1-3p Tamoxifen+Fulvestrant resistant cell line (LCC9)
hsa-miR-1185-1-3p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-1185-1-3p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-1185-1-3p Gemcitabine 60750 NSC613327 approved resistant cell line (MDA-231)
hsa-miR-1185-1-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-1185-1-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-1185-1-3p Cisplatin 5460033 NSC119875 approved resistant cell line (TOV-112D)

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