pre-miRNA Information | |
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pre-miRNA | hsa-mir-103b-1 |
Genomic Coordinates | chr5: 168560904 - 168560965 |
Description | Homo sapiens miR-103b-1 stem-loop |
Comment | None |
RNA Secondary Structure | |
Associated Diseases | |
pre-miRNA | hsa-mir-103b-2 |
Genomic Coordinates | chr20: 3917502 - 3917563 |
Description | Homo sapiens miR-103b-2 stem-loop |
Comment | None |
RNA Secondary Structure | |
Associated Diseases |
Mature miRNA Information | ||||||||||||||||||||||
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Mature miRNA | hsa-miR-103b | |||||||||||||||||||||
Sequence | 1| UCAUAGCCCUGUACAAUGCUGCU |23 | |||||||||||||||||||||
Evidence | Experimental | |||||||||||||||||||||
Experiments | ChIP-seq | DRVs in miRNA |
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SNPs in miRNA |
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Putative Targets |
Gene Information | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Gene Symbol | IFFO2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synonyms | - | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | intermediate filament family orphan 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Transcript | NM_001136265 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Expression | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Putative miRNA Targets on IFFO2 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3'UTR of IFFO2 (miRNA target sites are highlighted) |
>IFFO2|NM_001136265|3'UTR 1 TGACTGAGGCCCTGCGAGCCTGGTGGTCTTGGTGATGGGGCCCTGCCACCTCTCCTCATGGGGCCAGGAAGGCCCCTCGG 81 AGTGGGGTTCGAAGCCACACCACACAGACTTTCTCTGCCCTCCCTTCTCTGGAGGCCCTGAGGGACTGCTGCTTCCTTCC 161 TTCCTTCCACACCACCAACGGGTGCCCCGTCTCCATCCCCCACCCACCCAAGGAATGGTGCTGTCAATTTCTATTGTTCT 241 CCACATTACAAATGCAGACTTCTGTGCGGACTTTGCAGTGTTAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAGCT 321 CCAAAGAATTATTCCTAGCAGGTGTTTTTATACAGAACTCTAAGCTGAGGGCCGGGCCAACCGGCCGTGGTGTAATGTGG 401 TTTCTGCCGTCCGTCCCACCTGCTCCTCTGATTGGCCATGGGCTATGCCCTCCCTTCCTCCTGAGCCAGCCCAGACTCGG 481 CCTGGAGCTTGGGGTGCTCTGCCAACCCCCAGGAAGGAGCCGCTTGCCTCTGTGAGCTTTCTAGGCCTGGGTAGGGACCA 561 CCCCAATTTTCTCACTCCCTGAAGGAGAGAAAGGTGGAAGGAAGGGAAGGAGGACACATTTTAATTTTTTGGGGGGATCG 641 AGTGGCAAAGTTGAAGGGACAAGGCACTGTGAGGGGAAGGCAGAGCCTCACTGTGTTTAAACTACTATGCAAAAAACAAA 721 ACAAACAACAAAAGCAGCTTGCCTTATATCATTGTGGAAGGCAGGACCTCTCCTGGGCTCCTGGCTTCCCCCTGGAGCTG 801 GGAGAGAGGCCGGGGTTAGGGTGATCTGTGTGGCAGCACTGACTGGGTAGTGTGGGTTTGGCCGAGGTTGGTCATGAGGC 881 TGGGGTTCCCGCAAGGCACTGGCCTCCCTGACCGCTTGCTTCCTTCCGGACCTCTGGGTTCAGGGCGGGGGCGGAGGGAT 961 CCTTGATTTCCCTGATAACTTGATGTTCTTCCCTCCCTCGCCAGCCAACAATAGAGGCTTAGAGATCTGTAATTTCTCTG 1041 TGAGAAAGTCTGAAGGGGCCAGGCCTGGTCTCTGCTCCCTTCTACCCGCCTTGGGTTAGGACTGTCCGGCAGTTGCCTGC 1121 TTTTGGCTGCTGGCAGGAGAGAAGCAGGGTGGGCTGCTGGCAGTGCAGGAGCTGGAGTGAGGGCCATCCTCTTTCTGCTC 1201 CTCGACACACGCAAGCCGCTCTCAGCAGTTCCCTCGACTGGCCAGTCGGGGTATTGATCTGAGCCAGCATCCCCCAAGAC 1281 TTGAATGGCTTGAGTGGGACTGCGTTGAAGGGCACTGTGTGGCCCCCTTCCAAATCTCAGCTTGGAGCCAGCTGAGCAGG 1361 CTTTGCTTTATTATTATTTTTTAAGCCTACTGCAGTGGGTCTGTTGCCAATTTTAATTTTTTATTGTCCCAGGAGCTCCC 1441 TCTAGTGGTCAAGGTAGCAAAATGTGCCCAAGGACTAGAACTTGGGTCCCTCTGCCTTGCCTGGAGGCAGAAGGAGGGGG 1521 CTCTGGGTTTGACTGGGATTGTGGTCCCCAGGGGTCCGTGGCCTTTAAGGCTCTTCTCTCTTTTCTGTTTCCCCCACCTG 1601 TGTTACAGTCTTAAAAATACTGTACATAAAAGATATATGTAGAGAGAGAGAGAGAGCGTGAGAATGTGTTAGTGACTATG 1681 TGTGATGTAATTTATCACGATTTGGTGGCCTTCGTCATGAGTTTTTTCCTTTGTTTTCTTTTGCTGGGGGCACCTCCCAC 1761 GGGTCCCCTGTGGCAGTCTGGCTGTGACACTTCCATAGTCAGCATCTCTTGTTAGCCAAACAGTTCCCTTTGACAGGTAC 1841 TTGGAGGGACAATGGTTTTGGAAGAGAGACGGCCCTTCTCTCTCCTCACTCACCCTTGTTCTAAAGGTTACAGGGTTCAA 1921 ACATACCTGATTCTTGTTGTTATTGTTGTTGAATTTTTATTTTAACCAAAGGTTATCAGAGCCAGTTGGGCTTGGACCTC 2001 AGCTGCTAAAAAGATTTTCCGTTTCCTCGAGGGCAGGAAAACATCCACCCTCGTGGGTCTCCTCCGTCCAGGGCCGAGGG 2081 AGGCATTGGACAATGTGGTATGGGAGTTTCGTGGGCAGCGTGGAAGCCGGCCCTGGGTTGTTCCCCAAGGTGGTGGGAGG 2161 GTGACAGATATATCTTTAGACTTAAGACTGTAAGGCAGCAGTGTTAGCATGGGAGTAACTAAGGTTACTGTGGTTATCGG 2241 TGTCCGGCGGTATTATTTTTACTTTCCTCCTTGTATACATAGGTCATTTGTCTTTGAGGACTAGGGTACTCTAGGGAGTT 2321 TGAAAACTGCAGGAGCCAGAAAGAGATCCTGGCCTGAGAGTCCCTTCTGGCTGGCTTTTAATATCTGCTCTCCTCTTGGG 2401 AGTGAGGACTTGGGGCAGGTGGGTAGGAGAGGGAAAGCCAGAGTGTGATGGGCCTGCCTCCTGGGCTGGTTCCTGGGTCC 2481 GGCCTGCCTGCCTGCCTGCCTGCCTCTCCACCACATGCTTTTTTCAGTTAATGTCAGTGGGCCCTGCTTGTCCCCTCACC 2561 ATGAGCCCACAGCTTGCCAAGAAAGACCCCAACGCTCGCTGGGGCAGCACCAGTCCTAGCTGGGACGAATTGGTCCATCC 2641 TTTGTAAAGCTGTAAATACTTAATTTTGACTTTCTATTTCTAAGCCCAGTGTCATATTGACACTGGTATTTTAGAATTTT 2721 CTCAGATGGGCTCTCCTGCGCTGCCCTCTGTCTCCTGTTTTTGGGGGTTTTATACAAACAGAGGATTGGGGAGGGATAGG 2801 AAGACTAGCATCCTTTTGGCTCCCTGGTTGGTTGTGAAATACACACACACACACACACACACACACACACACTCGCACTC 2881 CTCTGAGACTCCGAACAGAGAAAAAAATTATTGGCAAATCAACACATTTTTCTTTCTCGTCTTGAGAAAATGTCTTGAGG 2961 TCCCTGAAGGGCCAAATCCATCGTGGACTAACTCTGTGGGTAGAGCTCAGATGACCTAGGGAGAATTAAACCACTTAAGC 3041 TTGGAGTGGGAGGAGAGGGGGTGGGGTGGGGGAGAATATAAGATGTAACTTAAGCTAAATGTAATCTATTTATAAAGCAA 3121 GAGACTCTCATCTATTTTTATGAAAGGAAGGGTTTTTTAATCTAGGGTAGGCAGTTGTGGTAGCCCAGCATTTTCCTGTG 3201 GACGAGACATGGTGCATGTTGTTGCTGGATTGAATGGAACCCATTCCTGTCCCCCGGCCTCGTCTTCTGTCCTCACTTTT 3281 GGTCATCCACACCCATGAGCAGCTTCAGCAGAGTGTAGGTCCCACTTCACCCCATTCTCCTCTCCTCTGACCCCTCAGCT 3361 CCTTGGAAGTCTTGGGGTGGGGATCTGAGGGGGTGGGTGGGCTGCAGGAAATTCAGAAATGTGGTGGGTGGGGGAAGGGA 3441 CAAGGCGCATTAGGGAGGGAACAAGCTGGGCTCTGGGGATAGGCTCTGATTAATTAGTTACTCTGACTCTGGTCTGCCGA 3521 GATCCATTTCCAACCCAGTTGCGTTGGGAGAGGGTTGGGAGGCAGCAGAGCATGGGTGACAGTGGGAGCACACGACTTCC 3601 TTGGAGCCTGGGCCTTTGCGGGTCCCAGGTGGTCAGGCAGCTGGAGCAGAAGTGGAAATGGCTTAAGATGCTCATAGCCC 3681 AGCCCCGGCTGTGTCTACTCCAGGCCAAGCCTGGGCTGCAGTCCTTGCTATGTTCCCCCCAGGGCCCTGGGGGGAGGGAT 3761 CAGGGTGCTGGGGGTTTCCTAGGACAGGGGTCTTCCCCCTTGAGACACCAAGCTCTGGCTCTAGAAGAGCTCTCTCCTGG 3841 AGTGGGGAGTCTGGAGGGGACTGGGTGGGTGCAGGTAAAGCCAGATTCTCTCTGGAAGGGAATTTTCTATGAATGGATGA 3921 TTTCCAGGCTCAGGGTGGGCTGTGTGTTAGTTCTGAGCAAATCCCTCACCAAGACCCTTCCCTCCCAAGCCCTCAAAGAA 4001 ATGAGGCAAAGCCCTTCCCTGCAAGACCCCTTGTGGATGTTTTTGCATCTACCTGATTTTTAGCCCCACCCAGGGAGACT 4081 TTATACCCCATGATCCTGCCCCACCGTTGCTGTTGTCTGCCAGCTGGGTCTAGCATCACAGGGAAGGGGGGGATTTATAC 4161 TCATGGAAAGACTACTGATCCTACCGGAAACCAACCTGTTTACTGTACTGTTGTAAATATCATGCCCTTTATATCCTGTA 4241 TATTGGCTTCTTTTAAATAAAGTGAAATGTCTTAGAACTGA Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
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DRVs in gene 3'UTRs |
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SNPs in gene 3'UTRs |
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