miRTarBase - #MIRT495147


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pre-miRNA Information
pre-miRNA hsa-mir-4480   
Genomic Coordinates chr10: 12578753 - 12578823
Description Homo sapiens miR-4480 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4480
Sequence 44| AGCCAAGUGGAAGUUACUUUA |64
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 10 + 12578796 23291724, 27587585 MiREDiBase
A-to-I 12 10 + 12578807 23291724, 27587585 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs929437808 7 dbSNP
rs1454494557 9 dbSNP
rs1345041659 17 dbSNP
rs561601367 21 dbSNP
Putative Targets

Gene Information
Gene Symbol STAC2   
Synonyms 24b2, 24b2/STAC2
Description SH3 and cysteine rich domain 2
Transcript NM_198993   
Expression
Putative miRNA Targets on STAC2
3'UTR of STAC2
(miRNA target sites are highlighted)		 
>STAC2|NM_198993|3'UTR
   1 GAGGAGCCAAGGGAACCCAGATGACACCCTTGCCCATGCCTGGACCTTGCTTCTGGCCAGGGAGGGGATCAGGCCCCCTT
  81 GTCCACTCCATACCCTTCCTCCCTCTGTCCCTCTCCTAGGTGCCACTTACCGTGGCTTAGGAGCCTTTTGTACTGGGGAA
 161 GATTTTATTTCTTGGGTGGGGTGCCCTGAGTGGGTTGATCCTCTGGGACTTGGCGGGGATGGGGTGGGGTGGGAGGGAAT
 241 GAGGAAGCTACAGGTAGGTCCACCCAACGCCCAGGCACCCCAGTCTACTTGCTGGGCTGAGTCCAGCCCTGGGGAAGATT
 321 CCTGGGGAATTTATTTGCTGCTTCTCCCAGCCTTCCCCTGCCCACACCACCTGCGCATGCCTGGCACACCCCTCTCCCCA
 401 CAGAGCCTCTGCTTGGGTCTATGTGTGTGTGACCGTGCATCTGCTCCTTTGCAAGTGGGGTCTTGGGAGCAGGCCTTTTT
 481 GTGTCCTCGGCCCTCCACCCTTGGTGGGGAGGGGACCCAGGACCATAGGAAGGTCCTGAGTCCACCTCCTGGTCTCCACC
 561 TCTGTCATTCCGTCAATTCTCAGGAAAGTTTTGCAGGAATCTCTCCCGTTACTTGAAACCTGGGCGGACAGATGAGGGGA
 641 AGGCTGAGGTCCCTGGAAGGTGTAACAAATCAGAGACTATCTGTTCAAGTAGAAAACCCAAGAGCTGGCCAGGTGTGGTG
 721 GCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGC
 801 CAACATGGTGAAACCCCGTCTCTACTAAAAGTACGAAACTTAGCCAGGCATGATGGGGGTCTGCCTGTAATGCCAGCTAC
 881 TCCAGAGGCTGAGGCAAGAGAATCACTTGAACCCGGGAGGCGGAGGTTTCAGTGAGCCGAGATTGCACCATTGCACCCCA
 961 GCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAGAAAGAAAAGGAAACCCAAGAGCTGCCTGGACAC
1041 ACGGAAACCCAACTGAGAACAAAATCCTGGCCCGTGCTTGGTCAAAGCAAACCCATTTCACTGTCAGGACCCCCGGTCAC
1121 ACAGGAACCACCCGCCAGGGGAGCCTGTGACTGTCAGTTCCTGTCCCAGGCTTTGCCCGGCCGCCCCAGGAACCCAACCC
1201 TCTGGGCTGACCTTTCTCCTGCTTCTCTCCAGGCTCTGCAGGGGACAGGGCAGGTGCTGCAGGAGCCCCTTTGCTGGCTT
1281 TATCTGCTCCCTTGTTCTGGACACAGAGCCCTGGGAAAAAGAGGGGGTGGAAGACAGACAAGGAAGGTGGAATGTTCTGT
1361 TTTGGCCACCAGGAAATGGGGTGGGGTGGGCATACACAGAGAGGACCCCTCTCTTAATACAGCTGCTTTTCTCGGTGCCA
1441 ACCTCCCTCCCCCAAGCTCAGATCCTCCTCTTATGCCCTTGATTGTGCCAGCCCATGCCACCCCCATCCTGGGCACAGTT
1521 ACACCCTCCCATGCAGTGGGAGAAACACAGACCCTCGTACCCAAAGGCCCCTGCCCCACTTCTCCCCCACAAAGCGGGGT
1601 CTCAAGCCACACTGCCCTGTTTGCTGCCATGAGGCCCCCCCCCCCAGCAATATCCCAGGGGCGGGCCCAATGCCCACTGT
1681 ACATGAGGCTGCATGATGGGTCTGGGGCCTTGCTGATTCCCCAGACCCCTAATTAAATGTTTCTTGTCCCAGCCCAAAAA
1761 AAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' auUUCA--UUGAAGG---UGAACCGa 5'
            ::||  | | ||:   ||||||| 
Target 5' gtGGGTTGATCCTCTGGGACTTGGCg 3'
 190 - 215 145.00 -10.50
2 
miRNA  3' auuUCAUUGAAGGUGAACCga 5'
             || |:| ||::|||||  
Target 5' cacAG-AGCCTCTGCTTGGgt 3'
 399 - 418 125.00 -11.10
3 
miRNA  3' auUUCAUUGAAGGUGAACcga 5'
            ||| :| |  ||||||   
Target 5' gcAAGAGAAT--CACTTGaac 3'
 894 - 912 115.00 -6.62
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30178435 27 COSMIC
COSN26997126 33 COSMIC
COSN26442094 46 COSMIC
COSN28189816 50 COSMIC
COSN28837055 103 COSMIC
COSN30696869 121 COSMIC
COSN28889529 131 COSMIC
COSN25152415 374 COSMIC
COSN22832274 439 COSMIC
COSN28815176 483 COSMIC
COSN28201361 535 COSMIC
COSN31486150 539 COSMIC
COSN27050073 570 COSMIC
COSN30542111 662 COSMIC
COSN8603074 707 COSMIC
COSN8603073 708 COSMIC
COSN4622518 800 COSMIC
COSN22675132 890 COSMIC
COSN24658377 989 COSMIC
COSN27038867 1227 COSMIC
COSN6103500 1351 COSMIC
COSN31520054 1544 COSMIC
COSN20113879 1606 COSMIC
COSN31480097 1631 COSMIC
COSN20113877 1634 COSMIC
COSN20113878 1635 COSMIC
COSN31528580 1743 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs375181928 1 dbSNP
rs16546 3 dbSNP
rs550924851 7 dbSNP
rs777503375 10 dbSNP
rs369092458 12 dbSNP
rs1266092770 16 dbSNP
rs753955911 18 dbSNP
rs375792224 19 dbSNP
rs756374902 21 dbSNP
rs1236504902 25 dbSNP
rs750575522 27 dbSNP
rs767806370 28 dbSNP
rs1410949910 29 dbSNP
rs943847781 32 dbSNP
rs1352887562 33 dbSNP
rs1301302910 35 dbSNP
rs1386300492 37 dbSNP
rs1391621529 38 dbSNP
rs1295501526 43 dbSNP
rs762028319 44 dbSNP
rs1410926401 45 dbSNP
rs911982869 55 dbSNP
rs537871551 64 dbSNP
rs573856502 67 dbSNP
rs966774498 69 dbSNP
rs555407061 71 dbSNP
rs1055988173 73 dbSNP
rs1237448085 77 dbSNP
rs1273012430 79 dbSNP
rs913930548 81 dbSNP
rs533964524 82 dbSNP
rs958567393 85 dbSNP
rs1291593803 86 dbSNP
rs1033901198 94 dbSNP
rs1002785424 103 dbSNP
rs3025221 108 dbSNP
rs1192341788 111 dbSNP
rs1260368568 118 dbSNP
rs749121283 120 dbSNP
rs752784435 130 dbSNP
rs16545 131 dbSNP
rs557987726 132 dbSNP
rs1164722726 144 dbSNP
rs1322363487 146 dbSNP
rs1391759089 148 dbSNP
rs1435538249 158 dbSNP
rs1419292236 171 dbSNP
rs886839738 181 dbSNP
rs984669335 184 dbSNP
rs1401217166 185 dbSNP
rs1293216849 189 dbSNP
rs1339164848 191 dbSNP
rs1459332728 200 dbSNP
rs1247476298 204 dbSNP
rs1351715248 208 dbSNP
rs1165529065 211 dbSNP
rs953347928 214 dbSNP
rs1215414503 215 dbSNP
rs1283338003 219 dbSNP
rs1444305663 220 dbSNP
rs1339517888 221 dbSNP
rs1216619796 225 dbSNP
rs1255408444 225 dbSNP
rs879724369 225 dbSNP
rs72823355 227 dbSNP
rs917250373 230 dbSNP
rs988737068 234 dbSNP
rs372686052 235 dbSNP
rs1450498435 238 dbSNP
rs1362619878 258 dbSNP
rs997438402 266 dbSNP
rs1302286334 268 dbSNP
rs1400733645 269 dbSNP
rs549284800 273 dbSNP
rs995150306 276 dbSNP
rs899751010 278 dbSNP
rs1019662686 280 dbSNP
rs1239071068 282 dbSNP
rs771413840 284 dbSNP
rs1355338304 294 dbSNP
rs943882770 301 dbSNP
rs1240272119 308 dbSNP
rs1254869955 312 dbSNP
rs1482262639 314 dbSNP
rs1202090289 320 dbSNP
rs890996190 325 dbSNP
rs1041556980 326 dbSNP
rs149720679 347 dbSNP
rs1382422829 351 dbSNP
rs1043545774 356 dbSNP
rs207476398 357 dbSNP
rs945485203 365 dbSNP
rs1356912452 371 dbSNP
rs913981072 374 dbSNP
rs550523731 375 dbSNP
rs1400128144 380 dbSNP
rs1055854337 383 dbSNP
rs1333733132 384 dbSNP
rs11657409 389 dbSNP
rs567962667 391 dbSNP
rs549222402 394 dbSNP
rs1234699221 399 dbSNP
rs563536803 401 dbSNP
rs971374448 403 dbSNP
rs940337637 415 dbSNP
rs1196560143 421 dbSNP
rs908849294 422 dbSNP
rs527880273 424 dbSNP
rs1458423470 427 dbSNP
rs1368182177 432 dbSNP
rs1025122049 433 dbSNP
rs867305114 434 dbSNP
rs560357689 435 dbSNP
rs1176814535 439 dbSNP
rs953118873 458 dbSNP
rs1464487662 460 dbSNP
rs951166931 461 dbSNP
rs1363732565 472 dbSNP
rs147645935 474 dbSNP
rs1430601577 476 dbSNP
rs533280710 481 dbSNP
rs965992323 488 dbSNP
rs562816158 489 dbSNP
rs899469216 493 dbSNP
rs544611501 498 dbSNP
rs746529878 502 dbSNP
rs1259817747 506 dbSNP
rs1268662620 508 dbSNP
rs891048545 513 dbSNP
rs1199244680 514 dbSNP
rs1263919030 525 dbSNP
rs1021584885 526 dbSNP
rs1489644939 548 dbSNP
rs1477159739 557 dbSNP
rs753641632 566 dbSNP
rs573912277 569 dbSNP
rs555638479 572 dbSNP
rs945830208 576 dbSNP
rs1347788975 581 dbSNP
rs1459093252 584 dbSNP
rs1249449536 586 dbSNP
rs1034518804 597 dbSNP
rs1002978058 603 dbSNP
rs80341052 608 dbSNP
rs1280023798 613 dbSNP
rs1053850015 626 dbSNP
rs1300524171 629 dbSNP
rs1310268214 638 dbSNP
rs1323776799 648 dbSNP
rs1223480504 655 dbSNP
rs936677714 656 dbSNP
rs573165256 658 dbSNP
rs184491757 662 dbSNP
rs1427865469 666 dbSNP
rs940930523 683 dbSNP
rs926671017 689 dbSNP
rs1472732993 694 dbSNP
rs887444540 705 dbSNP
rs550003501 708 dbSNP
rs1425248999 709 dbSNP
rs1163825185 716 dbSNP
rs563843355 717 dbSNP
rs374461344 731 dbSNP
rs1379236853 757 dbSNP
rs1410721247 760 dbSNP
rs1417338361 763 dbSNP
rs1299448346 767 dbSNP
rs1345751784 772 dbSNP
rs1447164239 775 dbSNP
rs1300920877 785 dbSNP
rs191937046 799 dbSNP
rs1048691835 806 dbSNP
rs949701617 815 dbSNP
rs868190025 817 dbSNP
rs11657506 818 dbSNP
rs1242443225 821 dbSNP
rs951527707 834 dbSNP
rs1026704514 835 dbSNP
rs745516038 837 dbSNP
rs1462049714 843 dbSNP
rs973878725 844 dbSNP
rs778740314 846 dbSNP
rs1237212988 867 dbSNP
rs757060622 878 dbSNP
rs978414515 880 dbSNP
rs139433407 888 dbSNP
rs147361710 893 dbSNP
rs1176362530 894 dbSNP
rs777605745 900 dbSNP
rs1253393668 905 dbSNP
rs868859988 914 dbSNP
rs781284480 915 dbSNP
rs1360765810 919 dbSNP
rs142109399 921 dbSNP
rs1020172797 922 dbSNP
rs1436919927 924 dbSNP
rs1449249747 928 dbSNP
rs990162988 930 dbSNP
rs1344394338 934 dbSNP
rs528015638 938 dbSNP
rs1247989438 939 dbSNP
rs958805175 945 dbSNP
rs1201763351 951 dbSNP
rs964590608 955 dbSNP
rs1345484539 957 dbSNP
rs1236702043 958 dbSNP
rs1262239171 958 dbSNP
rs1183527520 959 dbSNP
rs1010090861 961 dbSNP
rs1221656065 967 dbSNP
rs1331107471 970 dbSNP
rs1427217328 973 dbSNP
rs892944317 976 dbSNP
rs1397831082 981 dbSNP
rs1467442447 982 dbSNP
rs1329796791 983 dbSNP
rs1229079820 984 dbSNP
rs1335177809 985 dbSNP
rs1327117478 986 dbSNP
rs1397954036 987 dbSNP
rs1403394959 988 dbSNP
rs1336446241 989 dbSNP
rs397960577 990 dbSNP
rs1414813359 998 dbSNP
rs1034383245 1000 dbSNP
rs1002884706 1001 dbSNP
rs1469196142 1002 dbSNP
rs1273294737 1003 dbSNP
rs201362172 1003 dbSNP
rs531724503 1003 dbSNP
rs5820281 1003 dbSNP
rs1361513117 1004 dbSNP
rs1189232056 1005 dbSNP
rs201963278 1006 dbSNP
rs377040602 1006 dbSNP
rs777306550 1006 dbSNP
rs1242352143 1007 dbSNP
rs1168235479 1009 dbSNP
rs755082747 1015 dbSNP
rs1054680587 1016 dbSNP
rs56282124 1018 dbSNP
rs1000981171 1023 dbSNP
rs1015007672 1031 dbSNP
rs1366264849 1033 dbSNP
rs187897172 1042 dbSNP
rs752773514 1043 dbSNP
rs1223085330 1057 dbSNP
rs1342879308 1070 dbSNP
rs1350074336 1071 dbSNP
rs375751771 1073 dbSNP
rs1355264959 1074 dbSNP
rs931650807 1075 dbSNP
rs949352546 1083 dbSNP
rs1490371778 1085 dbSNP
rs900285002 1087 dbSNP
rs1040151460 1094 dbSNP
rs561023818 1102 dbSNP
rs918188209 1109 dbSNP
rs1047276808 1110 dbSNP
rs923785270 1111 dbSNP
rs1471968193 1112 dbSNP
rs930216043 1114 dbSNP
rs1386026092 1115 dbSNP
rs1450903565 1120 dbSNP
rs920130921 1129 dbSNP
rs974647252 1131 dbSNP
rs963864921 1133 dbSNP
rs1382196733 1134 dbSNP
rs910930138 1138 dbSNP
rs977940570 1140 dbSNP
rs551582266 1150 dbSNP
rs1247354569 1152 dbSNP
rs986487654 1153 dbSNP
rs954999874 1165 dbSNP
rs990590619 1170 dbSNP
rs1020224761 1171 dbSNP
rs1010184138 1178 dbSNP
rs533332524 1179 dbSNP
rs116226311 1182 dbSNP
rs1032884109 1183 dbSNP
rs1001767318 1192 dbSNP
rs1185145432 1194 dbSNP
rs905282821 1198 dbSNP
rs751814972 1199 dbSNP
rs529386652 1200 dbSNP
rs1365592229 1204 dbSNP
rs1454823636 1218 dbSNP
rs1172509410 1219 dbSNP
rs896520570 1233 dbSNP
rs1400620537 1236 dbSNP
rs1027896671 1242 dbSNP
rs1047033757 1244 dbSNP
rs1337759935 1251 dbSNP
rs1383126674 1254 dbSNP
rs182990699 1256 dbSNP
rs920167262 1261 dbSNP
rs1445179113 1272 dbSNP
rs1282303193 1277 dbSNP
rs1038544428 1285 dbSNP
rs942825612 1292 dbSNP
rs910990075 1293 dbSNP
rs1239061821 1298 dbSNP
rs1255358695 1300 dbSNP
rs986517536 1302 dbSNP
rs1040035912 1308 dbSNP
rs1263499542 1309 dbSNP
rs1367840551 1325 dbSNP
rs1176997203 1330 dbSNP
rs562105562 1335 dbSNP
rs521397 1339 dbSNP
rs1419760973 1345 dbSNP
rs1198191568 1346 dbSNP
rs192388104 1347 dbSNP
rs988472513 1348 dbSNP
rs1471225620 1349 dbSNP
rs957343638 1350 dbSNP
rs1177667783 1376 dbSNP
rs1400014376 1377 dbSNP
rs1325187082 1387 dbSNP
rs1464842741 1391 dbSNP
rs1296103086 1401 dbSNP
rs1325030555 1406 dbSNP
rs1042655107 1407 dbSNP
rs946563803 1409 dbSNP
rs76407749 1413 dbSNP
rs1225252293 1421 dbSNP
rs765683723 1426 dbSNP
rs927310837 1432 dbSNP
rs1364342688 1433 dbSNP
rs866744127 1434 dbSNP
rs1431211069 1438 dbSNP
rs376143541 1440 dbSNP
rs1481740372 1442 dbSNP
rs1200781615 1452 dbSNP
rs372215150 1456 dbSNP
rs762358592 1456 dbSNP
rs1477056514 1464 dbSNP
rs896572802 1467 dbSNP
rs1025636278 1474 dbSNP
rs1172932402 1478 dbSNP
rs1248377606 1484 dbSNP
rs1199400441 1488 dbSNP
rs984058055 1491 dbSNP
rs1363162133 1495 dbSNP
rs187761602 1497 dbSNP
rs1303702603 1499 dbSNP
rs557020463 1503 dbSNP
rs1212621119 1504 dbSNP
rs866446825 1509 dbSNP
rs868399436 1516 dbSNP
rs1297417271 1526 dbSNP
rs1308354125 1530 dbSNP
rs1244319848 1533 dbSNP
rs898752050 1534 dbSNP
rs1220595206 1535 dbSNP
rs1344561513 1543 dbSNP
rs1263829630 1550 dbSNP
rs1490863230 1553 dbSNP
rs1039004519 1556 dbSNP
rs519512 1557 dbSNP
rs889978512 1558 dbSNP
rs1051244252 1560 dbSNP
rs933765790 1566 dbSNP
rs376741133 1567 dbSNP
rs1487574349 1570 dbSNP
rs1188705267 1582 dbSNP
rs3025220 1584 dbSNP
rs1277136542 1587 dbSNP
rs964946989 1588 dbSNP
rs1163802863 1590 dbSNP
rs1383214977 1594 dbSNP
rs1426448922 1595 dbSNP
rs1303729668 1596 dbSNP
rs1359305154 1598 dbSNP
rs16544 1599 dbSNP
rs1008565612 1603 dbSNP
rs935625893 1614 dbSNP
rs1395158628 1616 dbSNP
rs902296059 1617 dbSNP
rs1362096092 1631 dbSNP
rs925910226 1634 dbSNP
rs756685506 1636 dbSNP
rs893659125 1636 dbSNP
rs969983084 1637 dbSNP
rs746539402 1638 dbSNP
rs927865340 1638 dbSNP
rs1241003749 1639 dbSNP
rs992614160 1639 dbSNP
rs1164077056 1641 dbSNP
rs950045309 1641 dbSNP
rs542362488 1642 dbSNP
rs983556580 1642 dbSNP
rs114255428 1643 dbSNP
rs974890898 1643 dbSNP
rs966405362 1644 dbSNP
rs994149316 1644 dbSNP
rs898460801 1645 dbSNP
rs1173745737 1646 dbSNP
rs1491034035 1646 dbSNP
rs35966204 1646 dbSNP
rs763615911 1646 dbSNP
rs878967481 1646 dbSNP
rs1010668485 1647 dbSNP
rs1016920142 1649 dbSNP
rs534294343 1658 dbSNP
rs1331083996 1661 dbSNP
rs1444954612 1662 dbSNP
rs1426932548 1665 dbSNP
rs1280678937 1668 dbSNP
rs893532864 1670 dbSNP
rs890039662 1676 dbSNP
rs1051299063 1680 dbSNP
rs566841887 1687 dbSNP
rs1324527766 1689 dbSNP
rs1268336721 1709 dbSNP
rs1198313807 1714 dbSNP
rs866401222 1717 dbSNP
rs1435903135 1721 dbSNP
rs1033496226 1727 dbSNP
rs1001988054 1737 dbSNP
rs906492401 1743 dbSNP
rs1479787630 1744 dbSNP
rs576558266 1745 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BAC-D2
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1133252. RNA binding protein: AGO2. Condition:Untreated ...

- Majoros WH; Lekprasert P; Mukherjee N; et al., 2013, Nature methods.

Article - Majoros WH; Lekprasert P; Mukherjee N; et al.
- Nature methods, 2013
High-throughput sequencing has opened numerous possibilities for the identification of regulatory RNA-binding events. Cross-linking and immunoprecipitation of Argonaute proteins can pinpoint a microRNA (miRNA) target site within tens of bases but leaves the identity of the miRNA unresolved. A flexible computational framework, microMUMMIE, integrates sequence with cross-linking features and reliably identifies the miRNA family involved in each binding event. It considerably outperforms sequence-only approaches and quantifies the prevalence of noncanonical binding modes.
LinkOut: [PMID: 23708386]
CLIP-seq Support 1 for dataset GSM1133252
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BAC-D2 / Untreated
Location of target site ENST00000333461.5 | 3UTR | UUGGCGGGGAUGGGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23708386 / GSE46611
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
117 hsa-miR-4480 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056040 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT091259 FXR1 FMR1 autosomal homolog 1 2 4
MIRT117347 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT234960 ZNF439 zinc finger protein 439 2 4
MIRT441356 ZNF75A zinc finger protein 75a 2 2
MIRT441426 STXBP2 syntaxin binding protein 2 2 2
MIRT441455 ZNF488 zinc finger protein 488 2 4
MIRT441524 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT441576 EXOC5 exocyst complex component 5 2 2
MIRT441597 ABCB5 ATP binding cassette subfamily B member 5 2 6
MIRT441610 ATP13A4 ATPase 13A4 2 2
MIRT441698 CIT citron rho-interacting serine/threonine kinase 2 2
MIRT441714 FGF9 fibroblast growth factor 9 2 2
MIRT441784 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441795 EXOSC2 exosome component 2 2 2
MIRT441868 RNASEL ribonuclease L 2 2
MIRT441900 SLC9A8 solute carrier family 9 member A8 2 6
MIRT441919 FAM217B family with sequence similarity 217 member B 2 2
MIRT441928 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT441938 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT442157 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442172 AZF1 azoospermia factor 1 2 2
MIRT442208 IRS1 insulin receptor substrate 1 2 2
MIRT442237 DDX19A DEAD-box helicase 19A 2 2
MIRT442366 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442572 SDC1 syndecan 1 2 2
MIRT442604 ZNF391 zinc finger protein 391 2 2
MIRT442609 MRC1 mannose receptor C-type 1 2 2
MIRT442647 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT442658 OIP5 Opa interacting protein 5 2 6
MIRT442686 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT442773 JAG1 jagged 1 2 2
MIRT442785 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT442895 PLCB3 phospholipase C beta 3 2 2
MIRT442941 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT442959 SGCD sarcoglycan delta 2 2
MIRT442998 EDAR ectodysplasin A receptor 2 2
MIRT443017 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443064 CASP5 caspase 5 2 2
MIRT443069 ABLIM1 actin binding LIM protein 1 2 2
MIRT443208 VPS36 vacuolar protein sorting 36 homolog 2 2
MIRT443237 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443253 A1CF APOBEC1 complementation factor 2 2
MIRT443329 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT443333 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443349 STX7 syntaxin 7 2 2
MIRT443452 CLIC5 chloride intracellular channel 5 2 2
MIRT443547 GPR35 G protein-coupled receptor 35 2 2
MIRT443616 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT443626 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT443730 ALPK3 alpha kinase 3 2 2
MIRT443786 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443852 RGS6 regulator of G protein signaling 6 2 2
MIRT445483 KLF5 Kruppel like factor 5 2 2
MIRT471105 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472329 NETO2 neuropilin and tolloid like 2 2 4
MIRT472391 NDRG3 NDRG family member 3 2 2
MIRT473522 MAX MYC associated factor X 2 2
MIRT473874 MAFK MAF bZIP transcription factor K 2 6
MIRT476021 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT478320 DDN dendrin 2 2
MIRT492049 TNFSF9 TNF superfamily member 9 2 2
MIRT494851 ANKRD24 ankyrin repeat domain 24 2 2
MIRT494991 TSSC1 EARP complex and GARP complex interacting protein 1 2 2
MIRT495034 RASSF2 Ras association domain family member 2 2 2
MIRT495111 NOL10 nucleolar protein 10 2 2
MIRT495113 TRADD TNFRSF1A associated via death domain 2 2
MIRT495131 METTL24 methyltransferase like 24 2 2
MIRT495147 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT495297 NUP54 nucleoporin 54 2 2
MIRT495341 RTN2 reticulon 2 2 2
MIRT495347 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT496682 DUSP18 dual specificity phosphatase 18 2 2
MIRT496743 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT496841 KCNIP2 potassium voltage-gated channel interacting protein 2 2 2
MIRT496852 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496889 FOXP1 forkhead box P1 2 2
MIRT496922 CLMN calmin 2 2
MIRT496990 TMEM231 transmembrane protein 231 2 2
MIRT497002 SNAP25 synaptosome associated protein 25 2 2
MIRT497058 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT500529 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 6
MIRT506048 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT512163 CD164 CD164 molecule 2 6
MIRT527051 RDH13 retinol dehydrogenase 13 2 2
MIRT532282 TNFSF14 TNF superfamily member 14 2 2
MIRT534083 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534605 RNASEH1 ribonuclease H1 2 4
MIRT539509 ACSS3 acyl-CoA synthetase short chain family member 3 2 2
MIRT543069 ARID4B AT-rich interaction domain 4B 2 2
MIRT544233 CCBL2 kynurenine aminotransferase 3 2 2
MIRT544686 ZNF224 zinc finger protein 224 2 4
MIRT546269 TMEM30A transmembrane protein 30A 2 4
MIRT559069 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT562768 RMI2 RecQ mediated genome instability 2 2 2
MIRT563974 HCFC1 host cell factor C1 2 2
MIRT564086 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT564525 PDXP pyridoxal phosphatase 2 2
MIRT564613 ZNF703 zinc finger protein 703 2 2
MIRT566252 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT614420 ZNF440 zinc finger protein 440 2 2
MIRT618789 MTHFR methylenetetrahydrofolate reductase 2 2
MIRT619160 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT641778 ZDHHC7 zinc finger DHHC-type containing 7 2 4
MIRT653680 SLC25A36 solute carrier family 25 member 36 2 2
MIRT657861 GJD2 gap junction protein delta 2 2 2
MIRT660879 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT668781 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT688559 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT695393 WDR41 WD repeat domain 41 2 2
MIRT698680 TCEA1 transcription elongation factor A1 2 2
MIRT700974 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT705055 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705864 AFF1 AF4/FMR2 family member 1 2 2
MIRT710586 CDCA4 cell division cycle associated 4 2 2
MIRT713904 IGF2R insulin like growth factor 2 receptor 2 2
MIRT717133 SKI SKI proto-oncogene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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