miRTarBase - #MIRT495216


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pre-miRNA Information
pre-miRNA hsa-mir-4471   
Genomic Coordinates chr8: 100382763 - 100382845
Description Homo sapiens miR-4471 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4471
Sequence 49| UGGGAACUUAGUAGAGGUUUAA |70
Evidence Experimental
Experiments Illumina
Putative Targets

Gene Information
Gene Symbol DSCR3   
Synonyms DCRA, DSCRA
Description DSCR3 arrestin fold containing
Transcript NM_006052   
Expression
Putative miRNA Targets on DSCR3
3'UTR of DSCR3
(miRNA target sites are highlighted)		 
>DSCR3|NM_006052|3'UTR
   1 CCCGGAGGAGGGAAGCATAGAGAACGGGAGTGGCCATCTGGAAATCCAGCTGGTTATCCAAATCCTAAGGGGAGCTACAG
  81 CCAGCGGCATATACTTGTTTTTGTGATTATTCTGTATCAGAAATGAAACAGACCCTCAAATTAACTTTCCTTCCTCATTT
 161 CTTGAGGCTTCTGCTTCCAACAGGCACCTCTAATCAGACCTTTTCTTTGAAATTCAACAAGATTTCTTAATGCTATTTGC
 241 CAAGACCATTTCACAGAAAACATTGACTGTGGCTCTTGCCTTATCTGTTCCTTTTTAGGTACAGTAAAACAATTGTGACA
 321 GCAGTTTGAGCTTGCTGGAGAGTGGCATCATGGGGACAAAAGGAAACCTCTGACTTGCTAATGGATGTAGCCAGGGACTC
 401 CCCATAGCAAAGGGTCTGTGGCCAGTTGACATCCAGGATGGCTGCAAGCGCACTTGATGGTCAGGAAGTTTGCAGATACT
 481 CGCCAAGGCAGAGCGCAAAGTGCTAGCCACTGGAAATGCATGACTTCCCTCCACCCCTACTCTATTCTGTAGTTTTTTGG
 561 TTTTGTTTCTGAGACGGAGTCTCAGTCTGTCACCCAGGCTGGAGTGATCTCAGCTCACTGCAACCTCCACCTCCCAGGTT
 641 CAAGCGACTCTCCTGCCTCAGCCTCCCGAGTAGTTGGGATTACAGGTGACTGCCACCGTGCCCGGCTAATGTTTGTATTT
 721 TTAGTAGAGACGGGGCTTCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGACCCACCCGCCTTGGCCTCCC
 801 AAAGTGCTGGGATTACAGGTGTGAGCCACCACACCCAGCCTCTGTAGTTCTTTTTACAACATTTTTCATTATAACTTTAA
 881 ATTTTTTAAGCAACTGGAAAAGTGTTCCTTGCTCTCTTGGGGGGATTTGGCTGGTGCCGAAGTGTTTCTGAAGTCTCAAG
 961 AACTGCCATAAAATCTCACGCTGCCATTTCCCTGAACAGATACATACATAGAGAGAGACAGTTTTCCAAACTGTGTCACG
1041 CAGGCTGAGTGCACTGGCAGGATCACAGCTCACGGCAGCCTCAACCTCCCTGGCTCAAGCGATCCCTCCCCTCAGCCTCC
1121 TGAGTAGCTGAGACTACAGGTGAGTGCCACCACACTCAGCTAATTTTCAAATTTTTTGTAGACAGGGTCTCCCTATGTTG
1201 CCCAGGCTGGTCTTGAACTCCTAGACTCAAGTGATCCTCCTGTCTTGGCCTCCCAAAGTGCTGAGATTACAGGTGTGAGC
1281 CACTGTGCCCAGCAGTTTCCCAGAATATATTTAAATGCAAAGTTACATGAGGGGAAAACATGTATGTTTGCTCCTGTTGT
1361 TACTGGGTAGGTTCTGAACAGCAGAAACCCATGTGCAGGGTGGGCTGGTGAAGGCCCCTCTCCGCAAGGTGGTAGCAGGA
1441 AAAGGTCCTTGACTTGATGAATTTGGTCTGCCTCTGAGCCACTGGAGGAAGCTGTTTTGAGCCAGGGTTTTTTGGCCTAA
1521 AGCCAGCATTTCCTCAGTCTCCCTTTGTGGTTCGAAGGATATGGACTATTGCAATACATTTCTTCCTTCAAATCCTGCCA
1601 CTGTTTTGTTGGCCCACAACTAATAGGACCTCAAAATAAGCCATGCTGCTTTGCACACACACTAGCCTTCTTTTGTACTT
1681 TTCATTCTGGATGGGCTTGGCCAAAACAGGCTCAGGCCAAAGACCTCCCAAGCTGTATGTACTTCCAGTATCCTGAAACA
1761 GTGTTTGGTGACATAATGCCAAGGGTAAACAAGCCTGATTTAGGCACTGCTTTATCCAGGGGCTTCACCCATGAAATTAA
1841 TAAAACTTATCTGAGTCACTTGAAACTTGGTTCCCAGAAAACACATTTCTGGTTTATAATCTCCTTTTATGCTCACCTGA
1921 CATTAATTATCTATCCTTGATGATGTGTTTAAACTGAGTAGCAGAAAACAGAGGCCACACTTTCTGGGAAATTTTAAAGG
2001 AAGAAACCATTTTTAATGAGATGAAAATATTTAACGAATTTAAAAAGCTAATGACAATTTTGAGAAAAGGTTTGGGATGT
2081 ATATTGCTATGTAATTTAATAAACTGATTTTATGGATAT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aaUUUGGAGA----UGAUUCAAGGGu 5'
            :|::| ||    ||| :|||||| 
Target 5' ctGAGTCACTTGAAACTTGGTTCCCa 3'
 1851 - 1876 142.00 -15.90
2 
miRNA  3' aaUUUGGAGAU---GAU--UCAAGGGu 5'
            :|:|| ||:   | |  ||||:|| 
Target 5' gtGAGCCACTGTGCCCAGCAGTTTCCc 3'
 1275 - 1301 134.00 -13.60
3 
miRNA  3' aauUUGGAGAUGAUUCAAGGGu 5'
             |:|||||::  |||||:: 
Target 5' cccAGCCTCTGT--AGTTCTTt 3'
 834 - 853 131.00 -15.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30488612 1 COSMIC
COSN30488592 2 COSMIC
COSN26974197 3 COSMIC
COSN26635936 16 COSMIC
COSN30495018 17 COSMIC
COSN30558367 32 COSMIC
COSN30447360 47 COSMIC
COSN26600973 75 COSMIC
COSN31553021 80 COSMIC
COSN30121437 98 COSMIC
COSN30184215 118 COSMIC
COSN22677509 400 COSMIC
COSN32062820 575 COSMIC
COSN20593483 730 COSMIC
COSN20593482 735 COSMIC
COSN25239506 859 COSMIC
COSN31779349 1009 COSMIC
COSN7145580 1015 COSMIC
COSN22149640 1499 COSMIC
COSN28078230 1502 COSMIC
COSN5453014 1510 COSMIC
COSN1892114 1512 COSMIC
COSN16617253 1594 COSMIC
COSN20116902 1684 COSMIC
COSN1892113 1690 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs771707513 1 dbSNP
rs774168614 3 dbSNP
rs770701531 4 dbSNP
rs936776798 6 dbSNP
rs749226839 9 dbSNP
rs777784405 15 dbSNP
rs769881592 18 dbSNP
rs1336184252 20 dbSNP
rs748186046 25 dbSNP
rs534369129 26 dbSNP
rs1248087296 32 dbSNP
rs1339117265 34 dbSNP
rs1276744912 44 dbSNP
rs755194884 45 dbSNP
rs1363922120 46 dbSNP
rs372301286 49 dbSNP
rs367651000 50 dbSNP
rs1274826509 58 dbSNP
rs1440371195 63 dbSNP
rs1202589728 65 dbSNP
rs1343249247 77 dbSNP
rs945402330 80 dbSNP
rs546759507 85 dbSNP
rs533469603 86 dbSNP
rs1168886556 95 dbSNP
rs1422031960 109 dbSNP
rs1339705027 114 dbSNP
rs1299540253 115 dbSNP
rs570840332 131 dbSNP
rs748104487 139 dbSNP
rs1318597849 148 dbSNP
rs112664774 149 dbSNP
rs1431343065 159 dbSNP
rs1330392310 162 dbSNP
rs1271740794 164 dbSNP
rs565908214 168 dbSNP
rs1035957235 169 dbSNP
rs73397230 181 dbSNP
rs970277702 188 dbSNP
rs547599202 192 dbSNP
rs1325210760 193 dbSNP
rs1392935120 196 dbSNP
rs368365190 208 dbSNP
rs768034314 210 dbSNP
rs1294249333 221 dbSNP
rs1446954180 233 dbSNP
rs1023135712 249 dbSNP
rs1194445068 260 dbSNP
rs995252191 263 dbSNP
rs980226400 268 dbSNP
rs898260378 272 dbSNP
rs963172874 283 dbSNP
rs1176145835 284 dbSNP
rs201970365 286 dbSNP
rs200341307 287 dbSNP
rs1003853608 292 dbSNP
rs1156934716 298 dbSNP
rs950394913 299 dbSNP
rs891008645 304 dbSNP
rs542316634 312 dbSNP
rs1320133680 313 dbSNP
rs1051050077 315 dbSNP
rs1030247546 321 dbSNP
rs528558637 328 dbSNP
rs1404156912 332 dbSNP
rs1197332863 336 dbSNP
rs559608471 336 dbSNP
rs146425815 337 dbSNP
rs775212876 342 dbSNP
rs1347041127 350 dbSNP
rs1267421935 357 dbSNP
rs79135244 362 dbSNP
rs1259640130 367 dbSNP
rs563640923 368 dbSNP
rs1350682151 382 dbSNP
rs1017449281 392 dbSNP
rs1287029852 398 dbSNP
rs1382024826 405 dbSNP
rs769741016 419 dbSNP
rs1270003400 438 dbSNP
rs1001331695 440 dbSNP
rs1043957615 441 dbSNP
rs1363309306 444 dbSNP
rs947412314 447 dbSNP
rs1160347976 448 dbSNP
rs778535334 449 dbSNP
rs144124849 450 dbSNP
rs1303558408 451 dbSNP
rs988780579 452 dbSNP
rs745607457 458 dbSNP
rs1389326584 476 dbSNP
rs780825403 481 dbSNP
rs928860285 482 dbSNP
rs981759404 494 dbSNP
rs1281895170 496 dbSNP
rs1235299882 500 dbSNP
rs896530332 503 dbSNP
rs1056603258 505 dbSNP
rs770943159 509 dbSNP
rs970625374 520 dbSNP
rs1331671322 521 dbSNP
rs1292980801 532 dbSNP
rs1284000532 533 dbSNP
rs746917924 537 dbSNP
rs1368891369 542 dbSNP
rs974216386 547 dbSNP
rs1419858318 565 dbSNP
rs184273736 575 dbSNP
rs1015311737 576 dbSNP
rs1443944563 577 dbSNP
rs1164058718 585 dbSNP
rs1003821100 591 dbSNP
rs1460327886 595 dbSNP
rs1171250855 599 dbSNP
rs974287416 608 dbSNP
rs139457407 617 dbSNP
rs867249990 624 dbSNP
rs1334150615 626 dbSNP
rs1029984866 645 dbSNP
rs996740944 646 dbSNP
rs983235864 659 dbSNP
rs1180755153 661 dbSNP
rs1324002727 662 dbSNP
rs534428701 665 dbSNP
rs192712924 667 dbSNP
rs1251066892 668 dbSNP
rs899749423 683 dbSNP
rs1197712752 694 dbSNP
rs1043553423 697 dbSNP
rs946544510 698 dbSNP
rs374164472 702 dbSNP
rs558209863 703 dbSNP
rs539681542 704 dbSNP
rs1426632593 705 dbSNP
rs964675160 709 dbSNP
rs538559894 723 dbSNP
rs188148345 731 dbSNP
rs1345554886 732 dbSNP
rs144542577 735 dbSNP
rs1404899086 741 dbSNP
rs1452810570 751 dbSNP
rs903730533 761 dbSNP
rs749317126 762 dbSNP
rs948961426 763 dbSNP
rs1380974131 766 dbSNP
rs1295324078 770 dbSNP
rs1308378332 774 dbSNP
rs1220844562 776 dbSNP
rs916168571 777 dbSNP
rs568455714 782 dbSNP
rs183493166 787 dbSNP
rs539774679 788 dbSNP
rs1204431497 793 dbSNP
rs1015279261 794 dbSNP
rs1245004068 802 dbSNP
rs1484866690 804 dbSNP
rs758351781 821 dbSNP
rs1262176007 823 dbSNP
rs955308597 827 dbSNP
rs1009609431 835 dbSNP
rs1416532812 837 dbSNP
rs752925593 838 dbSNP
rs1159116431 850 dbSNP
rs896457051 854 dbSNP
rs35853581 856 dbSNP
rs1056405321 861 dbSNP
rs149752329 871 dbSNP
rs996933952 882 dbSNP
rs899717586 893 dbSNP
rs1452266373 894 dbSNP
rs1177339702 900 dbSNP
rs905426498 903 dbSNP
rs569586083 908 dbSNP
rs1281740072 912 dbSNP
rs1345151040 916 dbSNP
rs1224306406 920 dbSNP
rs866984205 921 dbSNP
rs1280844845 930 dbSNP
rs1315139263 931 dbSNP
rs1215155895 935 dbSNP
rs941532515 938 dbSNP
rs113482038 939 dbSNP
rs1220011251 943 dbSNP
rs1267850850 944 dbSNP
rs79315103 947 dbSNP
rs1053187373 948 dbSNP
rs1405336961 955 dbSNP
rs1267305011 956 dbSNP
rs1418060971 960 dbSNP
rs1159165822 963 dbSNP
rs929051985 975 dbSNP
rs1206715142 977 dbSNP
rs998919028 979 dbSNP
rs563293526 980 dbSNP
rs1365278815 984 dbSNP
rs543709830 996 dbSNP
rs1224411371 997 dbSNP
rs907285202 1005 dbSNP
rs1371445450 1009 dbSNP
rs1223343107 1013 dbSNP
rs574612687 1017 dbSNP
rs1355791397 1018 dbSNP
rs1282668069 1019 dbSNP
rs948744485 1021 dbSNP
rs964759780 1021 dbSNP
rs910461838 1029 dbSNP
rs916151547 1031 dbSNP
rs1383952512 1037 dbSNP
rs1320366271 1039 dbSNP
rs560963443 1040 dbSNP
rs71332564 1042 dbSNP
rs867961665 1047 dbSNP
rs967815774 1049 dbSNP
rs1442100849 1052 dbSNP
rs908682215 1058 dbSNP
rs1020752854 1060 dbSNP
rs1385157544 1062 dbSNP
rs1009579981 1068 dbSNP
rs549790496 1074 dbSNP
rs1325921003 1076 dbSNP
rs982915674 1089 dbSNP
rs1441679008 1091 dbSNP
rs1035539185 1092 dbSNP
rs571695788 1100 dbSNP
rs922355672 1101 dbSNP
rs975091740 1102 dbSNP
rs1360037063 1107 dbSNP
rs1229861913 1111 dbSNP
rs1404262263 1130 dbSNP
rs1204711319 1143 dbSNP
rs766646541 1150 dbSNP
rs1239473625 1153 dbSNP
rs1038615922 1156 dbSNP
rs1128922 1168 dbSNP
rs113127651 1169 dbSNP
rs1022215983 1173 dbSNP
rs535538607 1177 dbSNP
rs1409610458 1178 dbSNP
rs1417738291 1178 dbSNP
rs1047278346 1187 dbSNP
rs1402710644 1188 dbSNP
rs956619197 1188 dbSNP
rs577374910 1189 dbSNP
rs1383479641 1193 dbSNP
rs923000232 1203 dbSNP
rs1268213358 1209 dbSNP
rs1338433513 1214 dbSNP
rs1214938241 1218 dbSNP
rs1040561020 1219 dbSNP
rs763661726 1225 dbSNP
rs1466146073 1231 dbSNP
rs1248583529 1234 dbSNP
rs910210918 1236 dbSNP
rs139751206 1237 dbSNP
rs1475324058 1245 dbSNP
rs868817420 1255 dbSNP
rs570031454 1256 dbSNP
rs894519994 1261 dbSNP
rs1175826392 1263 dbSNP
rs1038341060 1270 dbSNP
rs987916530 1271 dbSNP
rs1416108432 1275 dbSNP
rs960558091 1279 dbSNP
rs1035104796 1284 dbSNP
rs1002741026 1301 dbSNP
rs767744012 1314 dbSNP
rs370312577 1318 dbSNP
rs941577180 1334 dbSNP
rs969379031 1341 dbSNP
rs1491166822 1342 dbSNP
rs762511357 1344 dbSNP
rs1346588113 1348 dbSNP
rs1017358282 1354 dbSNP
rs376899646 1356 dbSNP
rs1282825622 1357 dbSNP
rs1047198328 1359 dbSNP
rs1217846251 1379 dbSNP
rs1802535 1382 dbSNP
rs568543904 1388 dbSNP
rs922357437 1392 dbSNP
rs1198887708 1399 dbSNP
rs1378420941 1408 dbSNP
rs975605086 1409 dbSNP
rs537768338 1417 dbSNP
rs963737324 1418 dbSNP
rs914878435 1419 dbSNP
rs989151863 1421 dbSNP
rs568686885 1423 dbSNP
rs548882984 1424 dbSNP
rs548422872 1435 dbSNP
rs981955676 1436 dbSNP
rs970992567 1440 dbSNP
rs1347585571 1441 dbSNP
rs1040084840 1453 dbSNP
rs1236301766 1454 dbSNP
rs1325016022 1459 dbSNP
rs1024391227 1461 dbSNP
rs192022084 1467 dbSNP
rs1350616681 1470 dbSNP
rs910191791 1473 dbSNP
rs1043803845 1493 dbSNP
rs1489981568 1494 dbSNP
rs1222201360 1498 dbSNP
rs1268381773 1510 dbSNP
rs1179791871 1514 dbSNP
rs946409549 1514 dbSNP
rs373486976 1517 dbSNP
rs894567147 1535 dbSNP
rs545840751 1537 dbSNP
rs187872006 1541 dbSNP
rs1005520541 1543 dbSNP
rs939186462 1545 dbSNP
rs757516106 1553 dbSNP
rs1047784791 1554 dbSNP
rs1423816465 1555 dbSNP
rs934170999 1561 dbSNP
rs980847532 1562 dbSNP
rs1487493996 1564 dbSNP
rs969894274 1582 dbSNP
rs1017040714 1596 dbSNP
rs901370080 1606 dbSNP
rs1245044992 1611 dbSNP
rs1039882962 1614 dbSNP
rs1312181174 1615 dbSNP
rs1357881851 1616 dbSNP
rs1245759625 1622 dbSNP
rs183228622 1623 dbSNP
rs1358773938 1630 dbSNP
rs1490556866 1632 dbSNP
rs189875877 1634 dbSNP
rs556429547 1636 dbSNP
rs1180556456 1641 dbSNP
rs1241255857 1642 dbSNP
rs1443878437 1644 dbSNP
rs1165259917 1645 dbSNP
rs769617268 1646 dbSNP
rs759231567 1647 dbSNP
rs923863348 1653 dbSNP
rs1460163609 1654 dbSNP
rs1167021756 1660 dbSNP
rs759539285 1665 dbSNP
rs1400567669 1666 dbSNP
rs1296801410 1668 dbSNP
rs1219141257 1669 dbSNP
rs1381250218 1670 dbSNP
rs1366195511 1673 dbSNP
rs1395913389 1683 dbSNP
rs200354618 1684 dbSNP
rs35044643 1685 dbSNP
rs774404316 1685 dbSNP
rs982476676 1686 dbSNP
rs879370060 1687 dbSNP
rs185994439 1688 dbSNP
rs1369504002 1690 dbSNP
rs34872273 1691 dbSNP
rs901307420 1710 dbSNP
rs1305833256 1711 dbSNP
rs1431295991 1716 dbSNP
rs1354877519 1718 dbSNP
rs1175169006 1720 dbSNP
rs1460820599 1724 dbSNP
rs1182319412 1726 dbSNP
rs1018871054 1737 dbSNP
rs529879310 1742 dbSNP
rs776557499 1745 dbSNP
rs1007287361 1748 dbSNP
rs888844263 1760 dbSNP
rs1404629662 1762 dbSNP
rs7278252 1780 dbSNP
rs74337174 1783 dbSNP
rs1017002619 1788 dbSNP
rs1180256979 1793 dbSNP
rs1380936566 1805 dbSNP
rs527335221 1807 dbSNP
rs1277910941 1815 dbSNP
rs1481773193 1820 dbSNP
rs746980668 1821 dbSNP
rs1311738107 1828 dbSNP
rs887146581 1850 dbSNP
rs1257728423 1859 dbSNP
rs369952559 1866 dbSNP
rs762927400 1869 dbSNP
rs1484839063 1885 dbSNP
rs150633047 1899 dbSNP
rs1210782471 1905 dbSNP
rs1263577368 1905 dbSNP
rs1209858781 1907 dbSNP
rs927792749 1909 dbSNP
rs1310897203 1911 dbSNP
rs980993347 1914 dbSNP
rs1428165540 1921 dbSNP
rs3165 1933 dbSNP
rs1223550593 1936 dbSNP
rs1177580020 1939 dbSNP
rs1349304767 1945 dbSNP
rs1285970125 1947 dbSNP
rs1379905412 1949 dbSNP
rs1411264381 1955 dbSNP
rs909948101 1962 dbSNP
rs901430327 1964 dbSNP
rs1452215041 1972 dbSNP
rs763503337 1974 dbSNP
rs1361507254 1977 dbSNP
rs1402227122 1980 dbSNP
rs984242225 1999 dbSNP
rs1040255004 2000 dbSNP
rs1367132839 2007 dbSNP
rs576026664 2029 dbSNP
rs1219937321 2032 dbSNP
rs1464372560 2035 dbSNP
rs772174575 2036 dbSNP
rs748180801 2050 dbSNP
rs1286486262 2076 dbSNP
rs1177026957 2084 dbSNP
rs1025657761 2088 dbSNP
rs976973151 2089 dbSNP
rs556200069 2093 dbSNP
rs1411310724 2107 dbSNP
rs374265179 2118 dbSNP
rs1018552077 2119 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BAC-D2
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1133252. RNA binding protein: AGO2. Condition:Untreated ...

- Majoros WH; Lekprasert P; Mukherjee N; et al., 2013, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aauuuggagaugAUUCAAGGGu 5'
                      | :|||||| 
Target 5' ------------UUGGUUCCCa 3'
 		1 - 10
Article - Majoros WH; Lekprasert P; Mukherjee N; et al.
- Nature methods, 2013
High-throughput sequencing has opened numerous possibilities for the identification of regulatory RNA-binding events. Cross-linking and immunoprecipitation of Argonaute proteins can pinpoint a microRNA (miRNA) target site within tens of bases but leaves the identity of the miRNA unresolved. A flexible computational framework, microMUMMIE, integrates sequence with cross-linking features and reliably identifies the miRNA family involved in each binding event. It considerably outperforms sequence-only approaches and quantifies the prevalence of noncanonical binding modes.
LinkOut: [PMID: 23708386]
CLIP-seq Support 1 for dataset GSM1133252
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BAC-D2 / Untreated
Location of target site ENST00000309117.6 | 3UTR | UUGGUUCCCAGAAAACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23708386 / GSE46611
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
51 hsa-miR-4471 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT082398 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 4
MIRT295740 KIF3B kinesin family member 3B 2 2
MIRT453005 CCDC115 coiled-coil domain containing 115 2 16
MIRT456180 ZDHHC6 zinc finger DHHC-type containing 6 2 2
MIRT457455 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT464992 TUBB2A tubulin beta 2A class IIa 2 10
MIRT467615 SLC7A5 solute carrier family 7 member 5 2 2
MIRT468602 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT470070 PTGES2 prostaglandin E synthase 2 2 2
MIRT470562 POU2F1 POU class 2 homeobox 1 2 2
MIRT472274 NFIB nuclear factor I B 2 2
MIRT473471 MCFD2 multiple coagulation factor deficiency 2 2 2
MIRT477892 DVL3 dishevelled segment polarity protein 3 2 4
MIRT486345 TACC2 transforming acidic coiled-coil containing protein 2 2 6
MIRT487190 NFASC neurofascin 2 4
MIRT488690 NAT9 N-acetyltransferase 9 (putative) 2 2
MIRT492106 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT495216 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT495666 TUBAL3 tubulin alpha like 3 2 2
MIRT501833 NCOA2 nuclear receptor coactivator 2 2 2
MIRT507147 GATAD2B GATA zinc finger domain containing 2B 2 4
MIRT508522 GDI1 GDP dissociation inhibitor 1 2 2
MIRT513839 KCTD15 potassium channel tetramerization domain containing 15 2 4
MIRT513883 GTF2IRD2 GTF2I repeat domain containing 2 2 4
MIRT527336 COL18A1 collagen type XVIII alpha 1 chain 2 2
MIRT537390 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT538879 BTBD1 BTB domain containing 1 2 2
MIRT539044 ATXN1L ataxin 1 like 2 4
MIRT554387 SERTAD3 SERTA domain containing 3 2 2
MIRT554936 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT567517 FOXC1 forkhead box C1 2 2
MIRT573598 CERS1 ceramide synthase 1 2 2
MIRT642417 CILP2 cartilage intermediate layer protein 2 2 2
MIRT643296 PHKG1 phosphorylase kinase catalytic subunit gamma 1 2 2
MIRT652883 SYVN1 synoviolin 1 2 2
MIRT657928 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT660302 BHLHE40 basic helix-loop-helix family member e40 2 2
MIRT664717 SLC7A6OS solute carrier family 7 member 6 opposite strand 2 2
MIRT698889 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT702007 MIDN midnolin 2 2
MIRT706808 APOL4 apolipoprotein L4 2 2
MIRT708330 DERL2 derlin 2 2 2
MIRT709885 ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase 2 2
MIRT711887 INSIG2 insulin induced gene 2 2 2
MIRT711956 CYP27B1 cytochrome P450 family 27 subfamily B member 1 2 2
MIRT715081 PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 2 2
MIRT716218 TRIM17 tripartite motif containing 17 2 2
MIRT718124 CHST4 carbohydrate sulfotransferase 4 2 2
MIRT718725 VWA9 integrator complex subunit 14 2 2
MIRT719450 APBA1 amyloid beta precursor protein binding family A member 1 2 2
MIRT725666 ABI2 abl interactor 2 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4471 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4471 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-4471 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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