miRTarBase - #MIRT495331


—
pre-miRNA Information
pre-miRNA hsa-mir-3940   
Genomic Coordinates chr19: 6416410 - 6416511
Description Homo sapiens miR-3940 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-3940-3p
Sequence 57| CAGCCCGGAUCCCAGCCCACUU |78
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN7451488 7 COSMIC
COSN8606686 12 COSMIC
COSN26556646 17 COSMIC
COSN32052209 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1038465553 2 dbSNP
rs779012242 3 dbSNP
rs753266822 4 dbSNP
rs766893050 6 dbSNP
rs1436139782 7 dbSNP
rs1402099476 8 dbSNP
rs1302859978 13 dbSNP
rs759153046 16 dbSNP
rs559739712 19 dbSNP
rs187508006 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MON1B   
Synonyms HSRG1, SAND2, SRG1
Description MON1 homolog B, secretory trafficking associated
Transcript NM_014940   
Expression
Putative miRNA Targets on MON1B
3'UTR of MON1B
(miRNA target sites are highlighted)		 
>MON1B|NM_014940|3'UTR
   1 TAGTTGGAGCTCCCAGACCAGGCAGTGCTGGGAGCAACCACCTTTGTTTTTTACCTTCTGTCTACCCTGGAAATGTGTGT
  81 GGGGGTGTGTCTGTGGCCAGTCATTGTCTCCCTAAGCAATGGGGCAAGGTCTGAGGGCCCACCGATGAGAGAGATGGTGG
 161 CAGCCGCCAGGCGAGCAGGCTGCTTTCCCTGCCCAGTCATGCACCTCCCCCTCTGGGGAAATCCTTAGGCCTCCCTCTCC
 241 CTTCCCTCTGTCTCATCTCCTCCACTTGGATGATGCTCTAGCCTCTGTCAGGGACTGTCCCCTCCAAACTTGCTTCCGTG
 321 GTCTGCCTCCTAGTTGAATCTCAGCCCTGAGTGTCCAGATCTGGCCAAGGTGTCTAGGGTGGCCCACGGGGGTGCTGGAA
 401 TTGGCACTTCAGGGCCAGGCTATGCTTGGGACTGGCCTGAGGGTATTTTAAAGAAAAAAACTACATAAAAGGCCTAAAAG
 481 TAAGACCCACAAGGATATTCCTTTGCCCTTCTTGTACTTTTTTCATCTTTACCCTGCCAGAAATGACCCGCCCTCAATGC
 561 TGGCTGCTGCTAACATTAATGAGAAGGTGGCCTTCAGTGTCCACCTGTGGAACCCAGGACACAGCACCTGACTGCACACA
 641 GTGGCTGAAATCCAGCATTTTTACATAGGAGATGCACTTAGCCTCTAAGCCTCGTTTTACTCATCTGTGAAACAGAGATA
 721 AGTAACCCTCTCTCATGAACTCTTTGATGAGGATTTGTAAACGAAAACAGACTCGAACTATTGTGTACCACCACATAGCA
 801 CATGCACGTCTGTCCCAGACTTTGACAACCTGCACAAGACAAGCAGCCTAAAGCAGGAGAGACCTCCCTAGGGTTTTGTG
 881 TGTGTGCACACTACCCTCACTCCCCAACTGGCCATTACCCTAGTTCTGCCCTTGTTTGTGGAGTTACAGCCTCAAGGTTG
 961 TAGCATGTGTGCTGGCAATCAGGGCCGCAGTGTGTTCTGCGCCTGCCCAGAGCTGACTCCTGATTTAACCGCTGGCGTAA
1041 CCGCGGGTTGCACGCATGCGTGCTGAAAAGCCTTTCACCCTCACGTGGTTTCTTTTTTAACCAGTCATCAAGCGAGGCTC
1121 GCGCGCAGGCCCCGCGTTGGAAAATGGCGGGGAAGCTGAAACCTCTGAATGTGGAGGCGCCAGAAGCTGCTGAGGAGGCT
1201 GAAGGTAGTGAGGGCAAGTGGGCTGCACTCCTTTCTCTCCAACCAGGGCAGAAAGGAGGGAGGATTCGTCCCATTACAAT
1281 AATGAAATAATGATATTCTAATTTTTTTAAATAAAATGTTAAGCCTTTTGTTATTGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuCACCCGACC-CUAGGCCCGac 5'
            ||| |||||  ||| ||||  
Target 5' atGTGTGCTGGCAATCAGGGCcg 3'
 965 - 987 124.00 -19.10
2 
miRNA  3' uucACCCG---ACCCUAGGCCCGAc 5'
             | |||   |  |: || |||| 
Target 5' gaaTTGGCACTTCAGGGCCAGGCTa 3'
 398 - 422 115.00 -10.40
3 
miRNA  3' uucaccCGACCCUA---G-GCCCGAc 5'
                ||||| :|   | ||||:| 
Target 5' ttaaccGCTGGCGTAACCGCGGGTTg 3'
 1025 - 1050 108.00 -18.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
684734 1166 ClinVar
COSN26984876 31 COSMIC
COSN30448473 31 COSMIC
COSN30457207 42 COSMIC
COSN20071994 53 COSMIC
COSN31613912 53 COSMIC
COSN30498613 61 COSMIC
COSN30452584 68 COSMIC
COSN30629220 98 COSMIC
COSN7272510 109 COSMIC
COSN30728652 126 COSMIC
COSN17889837 152 COSMIC
COSN26434386 168 COSMIC
COSN28914413 310 COSMIC
COSN23303863 321 COSMIC
COSN17260873 380 COSMIC
COSN5837253 419 COSMIC
COSN1709440 777 COSMIC
COSN20078627 873 COSMIC
COSN17045617 894 COSMIC
COSN28813896 903 COSMIC
COSN30582964 1051 COSMIC
COSN31561881 1054 COSMIC
COSN31603677 1085 COSMIC
COSN30121758 1093 COSMIC
COSN31522470 1109 COSMIC
COSN19771500 1121 COSMIC
COSN24305538 1124 COSMIC
COSN30127015 1126 COSMIC
COSN26728276 1134 COSMIC
COSM9273982 1149 COSMIC
COSM7534327 1152 COSMIC
COSM4129374 1154 COSMIC
COSM6581928 1175 COSMIC
COSM8535956 1180 COSMIC
COSN22316193 1221 COSMIC
COSN31524242 1265 COSMIC
COSN30534047 1269 COSMIC
COSN26434496 1310 COSMIC
COSN6094862 1642 COSMIC
COSN18882170 1927 COSMIC
COSN16170558 1951 COSMIC
COSN6647351 1984 COSMIC
COSN7272511 2316 COSMIC
COSN18915520 2453 COSMIC
COSN16138958 2959 COSMIC
COSN27072649 3025 COSMIC
COSN5412180 3191 COSMIC
COSN16607601 3506 COSMIC
COSN6094864 3879 COSMIC
COSN19030732 4049 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1181692696 2 dbSNP
rs1409342931 4 dbSNP
rs745860660 5 dbSNP
rs778358662 8 dbSNP
rs747630593 10 dbSNP
rs771919791 13 dbSNP
rs1314296003 14 dbSNP
rs200261417 19 dbSNP
rs746828724 20 dbSNP
rs770886579 21 dbSNP
rs776541685 22 dbSNP
rs763321414 25 dbSNP
rs940063153 27 dbSNP
rs768918558 28 dbSNP
rs1039020831 39 dbSNP
rs371690150 40 dbSNP
rs761893042 42 dbSNP
rs750970423 43 dbSNP
rs747667177 47 dbSNP
rs376933532 49 dbSNP
rs574875070 52 dbSNP
rs1024578342 53 dbSNP
rs898790538 56 dbSNP
rs1252149813 57 dbSNP
rs996980122 64 dbSNP
rs1414362806 67 dbSNP
rs1256036966 68 dbSNP
rs1316399505 69 dbSNP
rs1294185351 74 dbSNP
rs1265403884 79 dbSNP
rs1224591100 81 dbSNP
rs147383637 83 dbSNP
rs1331104381 85 dbSNP
rs1357389170 88 dbSNP
rs1298546083 100 dbSNP
rs560724718 101 dbSNP
rs1226687448 108 dbSNP
rs771990344 113 dbSNP
rs980435569 118 dbSNP
rs1218637055 120 dbSNP
rs1032921707 127 dbSNP
rs1008412404 130 dbSNP
rs957065432 140 dbSNP
rs1485572843 141 dbSNP
rs113966501 142 dbSNP
rs375891891 144 dbSNP
rs775192031 145 dbSNP
rs1176137938 147 dbSNP
rs1420921453 153 dbSNP
rs1238895945 155 dbSNP
rs1178198853 156 dbSNP
rs546110838 161 dbSNP
rs139586027 162 dbSNP
rs569720396 166 dbSNP
rs113523009 167 dbSNP
rs531217628 168 dbSNP
rs979875510 169 dbSNP
rs1316935427 170 dbSNP
rs1307910266 173 dbSNP
rs942872386 174 dbSNP
rs548158377 176 dbSNP
rs1377508913 180 dbSNP
rs1395284803 189 dbSNP
rs1399840148 193 dbSNP
rs1039062926 195 dbSNP
rs13335868 196 dbSNP
rs930009922 200 dbSNP
rs538386304 205 dbSNP
rs1380925545 208 dbSNP
rs1158196255 209 dbSNP
rs1438052578 210 dbSNP
rs188117951 211 dbSNP
rs554081468 212 dbSNP
rs898716921 212 dbSNP
rs1014090342 219 dbSNP
rs1284678114 226 dbSNP
rs1237395516 229 dbSNP
rs1023687275 230 dbSNP
rs1299881689 232 dbSNP
rs1243646596 240 dbSNP
rs765353973 241 dbSNP
rs891281142 243 dbSNP
rs1382706939 246 dbSNP
rs71394302 247 dbSNP
rs1297635013 251 dbSNP
rs1031834817 255 dbSNP
rs891545652 256 dbSNP
rs533129059 258 dbSNP
rs1001373490 263 dbSNP
rs550099870 265 dbSNP
rs1478425910 267 dbSNP
rs1263160290 268 dbSNP
rs565722219 271 dbSNP
rs988702988 277 dbSNP
rs1019963425 279 dbSNP
rs1451715216 280 dbSNP
rs954990322 288 dbSNP
rs986987070 290 dbSNP
rs376574193 292 dbSNP
rs774831523 293 dbSNP
rs1271701224 296 dbSNP
rs979968976 298 dbSNP
rs569923447 299 dbSNP
rs1339721300 307 dbSNP
rs974258024 310 dbSNP
rs1189345724 318 dbSNP
rs537901947 319 dbSNP
rs1324286033 321 dbSNP
rs1329431982 322 dbSNP
rs1388912387 324 dbSNP
rs930248806 325 dbSNP
rs1169982307 327 dbSNP
rs1035597542 328 dbSNP
rs1047266142 330 dbSNP
rs1423385408 335 dbSNP
rs1192060582 338 dbSNP
rs917926006 346 dbSNP
rs960134305 347 dbSNP
rs760073250 350 dbSNP
rs1045597775 359 dbSNP
rs530187298 362 dbSNP
rs908583736 365 dbSNP
rs1175299604 368 dbSNP
rs1449494056 369 dbSNP
rs1274729915 375 dbSNP
rs1388156929 378 dbSNP
rs905258221 379 dbSNP
rs554929530 386 dbSNP
rs1408427898 389 dbSNP
rs1255933883 391 dbSNP
rs1170059023 392 dbSNP
rs75457512 393 dbSNP
rs1275494778 395 dbSNP
rs974042498 397 dbSNP
rs548831800 398 dbSNP
rs1394719210 405 dbSNP
rs71396103 416 dbSNP
rs932663329 419 dbSNP
rs1370924089 421 dbSNP
rs181233706 430 dbSNP
rs1020204022 433 dbSNP
rs1426546767 454 dbSNP
rs912853132 461 dbSNP
rs1476733830 463 dbSNP
rs1234134594 464 dbSNP
rs545949970 471 dbSNP
rs1053298430 473 dbSNP
rs1236130769 474 dbSNP
rs1213600482 475 dbSNP
rs1007873612 480 dbSNP
rs1277876485 481 dbSNP
rs1217434073 484 dbSNP
rs891509895 485 dbSNP
rs1018471576 489 dbSNP
rs1311566093 502 dbSNP
rs1273294426 506 dbSNP
rs1308704467 507 dbSNP
rs1241147355 511 dbSNP
rs1011342212 518 dbSNP
rs1329699857 527 dbSNP
rs753340909 528 dbSNP
rs963844113 533 dbSNP
rs1334026945 534 dbSNP
rs973771657 538 dbSNP
rs377582962 540 dbSNP
rs72798545 542 dbSNP
rs1438676469 550 dbSNP
rs186324490 551 dbSNP
rs1186101827 554 dbSNP
rs866038324 556 dbSNP
rs1005091370 570 dbSNP
rs1236696098 571 dbSNP
rs1014774485 572 dbSNP
rs1448736479 578 dbSNP
rs1288242525 585 dbSNP
rs961738013 591 dbSNP
rs983030246 593 dbSNP
rs918166961 596 dbSNP
rs1411670770 597 dbSNP
rs1162860425 602 dbSNP
rs949438058 604 dbSNP
rs1380272393 605 dbSNP
rs147575188 608 dbSNP
rs1298246820 609 dbSNP
rs527257453 611 dbSNP
rs1358105882 613 dbSNP
rs1166406986 614 dbSNP
rs1424036230 615 dbSNP
rs912772590 615 dbSNP
rs926592899 616 dbSNP
rs1412799671 617 dbSNP
rs1179963872 621 dbSNP
rs936771940 623 dbSNP
rs981596789 624 dbSNP
rs944315189 628 dbSNP
rs1215846988 631 dbSNP
rs1462397835 637 dbSNP
rs1283988085 641 dbSNP
rs1223963631 642 dbSNP
rs1328572852 647 dbSNP
rs1053836259 650 dbSNP
rs1322621751 654 dbSNP
rs1324997033 659 dbSNP
rs893008055 667 dbSNP
rs1342898884 668 dbSNP
rs755750487 672 dbSNP
rs541139766 675 dbSNP
rs778633873 680 dbSNP
rs1053672017 684 dbSNP
rs866848687 687 dbSNP
rs564121427 692 dbSNP
rs891030256 694 dbSNP
rs1008535532 695 dbSNP
rs1162394722 703 dbSNP
rs191689686 704 dbSNP
rs1424101180 720 dbSNP
rs1192781007 728 dbSNP
rs964012223 729 dbSNP
rs1266190786 731 dbSNP
rs372388791 733 dbSNP
rs1446176432 735 dbSNP
rs377008997 736 dbSNP
rs1216246328 737 dbSNP
rs1243688367 738 dbSNP
rs1265125482 740 dbSNP
rs758318991 751 dbSNP
rs1219684353 753 dbSNP
rs995227317 755 dbSNP
rs1476509027 763 dbSNP
rs1026684770 764 dbSNP
rs1218560120 765 dbSNP
rs549989810 766 dbSNP
rs951588602 767 dbSNP
rs982894668 769 dbSNP
rs1302739365 774 dbSNP
rs905657769 775 dbSNP
rs779852185 776 dbSNP
rs1475589459 781 dbSNP
rs569995144 783 dbSNP
rs1291384351 785 dbSNP
rs1448551961 788 dbSNP
rs1400670478 789 dbSNP
rs1169776689 794 dbSNP
rs1379346545 795 dbSNP
rs1167679834 797 dbSNP
rs1178288282 803 dbSNP
rs545144328 804 dbSNP
rs1001121038 805 dbSNP
rs1266787424 809 dbSNP
rs1191918796 814 dbSNP
rs1459313487 815 dbSNP
rs1383440862 817 dbSNP
rs971021394 820 dbSNP
rs1198469743 821 dbSNP
rs1239159739 821 dbSNP
rs1400430578 827 dbSNP
rs1456800579 830 dbSNP
rs1056736047 831 dbSNP
rs1311046827 833 dbSNP
rs777470215 834 dbSNP
rs748765438 841 dbSNP
rs1347385863 844 dbSNP
rs1241861008 845 dbSNP
rs1412505749 849 dbSNP
rs926651288 855 dbSNP
rs1377251437 860 dbSNP
rs1330394868 862 dbSNP
rs936647197 865 dbSNP
rs989601357 867 dbSNP
rs913967906 868 dbSNP
rs11640897 869 dbSNP
rs1277634873 870 dbSNP
rs1349851923 883 dbSNP
rs1465495417 886 dbSNP
rs1377073760 887 dbSNP
rs945889210 887 dbSNP
rs116855347 890 dbSNP
rs1441755296 891 dbSNP
rs963230357 894 dbSNP
rs890933302 895 dbSNP
rs1178292245 899 dbSNP
rs1436387426 900 dbSNP
rs943973714 907 dbSNP
rs1039995682 908 dbSNP
rs111615388 915 dbSNP
rs145600976 919 dbSNP
rs985429325 920 dbSNP
rs1237537170 927 dbSNP
rs148882587 933 dbSNP
rs1313163616 939 dbSNP
rs886846334 944 dbSNP
rs1395371017 948 dbSNP
rs1400044403 952 dbSNP
rs1311111955 953 dbSNP
rs1003894573 958 dbSNP
rs1361277217 962 dbSNP
rs1158218630 963 dbSNP
rs11640619 964 dbSNP
rs971268336 967 dbSNP
rs375185057 971 dbSNP
rs1256067884 973 dbSNP
rs913506131 976 dbSNP
rs1202929760 981 dbSNP
rs570238995 981 dbSNP
rs1410591599 984 dbSNP
rs183542732 985 dbSNP
rs749575341 987 dbSNP
rs989465981 988 dbSNP
rs927014480 989 dbSNP
rs937106290 990 dbSNP
rs913873268 994 dbSNP
rs186695481 1000 dbSNP
rs774461393 1001 dbSNP
rs1341142617 1003 dbSNP
rs576698148 1011 dbSNP
rs1297740963 1018 dbSNP
rs895465627 1019 dbSNP
rs113908772 1020 dbSNP
rs912407344 1021 dbSNP
rs943863132 1024 dbSNP
rs1457680617 1026 dbSNP
rs28676830 1031 dbSNP
rs1173383080 1032 dbSNP
rs1478436496 1033 dbSNP
rs561643410 1034 dbSNP
rs899120741 1036 dbSNP
rs1281230884 1037 dbSNP
rs1452945002 1042 dbSNP
rs572007822 1043 dbSNP
rs1028843016 1045 dbSNP
rs1233297347 1046 dbSNP
rs931008892 1048 dbSNP
rs1317286470 1051 dbSNP
rs1301422463 1054 dbSNP
rs540626387 1055 dbSNP
rs1315781469 1057 dbSNP
rs1332934459 1057 dbSNP
rs1324387686 1058 dbSNP
rs564208768 1061 dbSNP
rs1279808437 1067 dbSNP
rs886735129 1072 dbSNP
rs1003925793 1073 dbSNP
rs1025136002 1075 dbSNP
rs772486821 1077 dbSNP
rs1166696545 1078 dbSNP
rs906740660 1081 dbSNP
rs1020144577 1083 dbSNP
rs1002763653 1085 dbSNP
rs1437368517 1086 dbSNP
rs1033963396 1088 dbSNP
rs367810281 1093 dbSNP
rs1233745969 1095 dbSNP
rs989255565 1097 dbSNP
rs1457237397 1100 dbSNP
rs1020493882 1102 dbSNP
rs1481832586 1107 dbSNP
rs1011141686 1108 dbSNP
rs1376277050 1109 dbSNP
rs1347142774 1113 dbSNP
rs1020972362 1114 dbSNP
rs754198233 1115 dbSNP
rs1454313027 1117 dbSNP
rs1175036087 1121 dbSNP
rs533039786 1122 dbSNP
rs966668005 1123 dbSNP
rs114764479 1125 dbSNP
rs11544784 1126 dbSNP
rs937536329 1128 dbSNP
rs1330557676 1129 dbSNP
rs1371703786 1130 dbSNP
rs757888203 1131 dbSNP
rs1305810658 1132 dbSNP
rs1342971073 1133 dbSNP
rs8398 1134 dbSNP
rs111823947 1135 dbSNP
rs921068696 1136 dbSNP
rs1309598208 1137 dbSNP
rs931232480 1138 dbSNP
rs770974432 1141 dbSNP
rs1469358304 1142 dbSNP
rs570203837 1147 dbSNP
rs1196059082 1148 dbSNP
rs369924114 1149 dbSNP
rs908248831 1150 dbSNP
rs1168096720 1151 dbSNP
rs1345859108 1153 dbSNP
rs988281089 1154 dbSNP
rs1421261428 1156 dbSNP
rs745591157 1157 dbSNP
rs1046168724 1158 dbSNP
rs1036440947 1159 dbSNP
rs899053487 1161 dbSNP
rs756075235 1163 dbSNP
rs1462892430 1164 dbSNP
rs112674196 1166 dbSNP
rs532227355 1168 dbSNP
rs761911708 1170 dbSNP
rs1435895157 1171 dbSNP
rs1158811038 1172 dbSNP
rs1418718934 1175 dbSNP
rs1055717836 1179 dbSNP
rs1342674159 1180 dbSNP
rs1217177613 1181 dbSNP
rs893942225 1183 dbSNP
rs1335925780 1184 dbSNP
rs1011172908 1187 dbSNP
rs772245220 1189 dbSNP
rs4888607 1190 dbSNP
rs966741546 1192 dbSNP
rs1243476206 1195 dbSNP
rs761238363 1196 dbSNP
rs77430739 1198 dbSNP
rs1282572535 1199 dbSNP
rs1418237257 1201 dbSNP
rs754218754 1203 dbSNP
rs552313156 1204 dbSNP
rs199890788 1205 dbSNP
rs965171145 1209 dbSNP
rs974831608 1211 dbSNP
rs1404822923 1213 dbSNP
rs1319136572 1214 dbSNP
rs1362541858 1215 dbSNP
rs1398320575 1216 dbSNP
rs1277827947 1217 dbSNP
rs1356457143 1218 dbSNP
rs1034593868 1223 dbSNP
rs958858422 1224 dbSNP
rs539529755 1226 dbSNP
rs1356334179 1228 dbSNP
rs1365522747 1229 dbSNP
rs752430911 1232 dbSNP
rs952540401 1236 dbSNP
rs1416916040 1237 dbSNP
rs1487032780 1238 dbSNP
rs962114381 1240 dbSNP
rs11544783 1241 dbSNP
rs1257829378 1251 dbSNP
rs79760539 1252 dbSNP
rs777479812 1255 dbSNP
rs1461998604 1256 dbSNP
rs373375255 1259 dbSNP
rs1224075035 1265 dbSNP
rs1193111337 1269 dbSNP
rs939729932 1271 dbSNP
rs1391730961 1274 dbSNP
rs535625150 1280 dbSNP
rs145052441 1284 dbSNP
rs1278250509 1291 dbSNP
rs1460831590 1292 dbSNP
rs1381198809 1302 dbSNP
rs1294865265 1309 dbSNP
rs572639117 1309 dbSNP
rs76154891 1310 dbSNP
rs775165602 1316 dbSNP
rs557773263 1323 dbSNP
rs927625931 1325 dbSNP
rs1040616072 1327 dbSNP
rs117687745 1331 dbSNP
rs1054849137 1335 dbSNP
rs1169698860 1339 dbSNP
rs1417473223 1348 dbSNP
rs894013950 1348 dbSNP
rs1011078003 1349 dbSNP
rs1041809331 1350 dbSNP
rs1042686093 1359 dbSNP
rs1212261456 1361 dbSNP
rs537786854 1362 dbSNP
rs1259222351 1363 dbSNP
rs1305190371 1366 dbSNP
rs1280135614 1373 dbSNP
rs1302860470 1374 dbSNP
rs868466395 1375 dbSNP
rs1369855794 1384 dbSNP
rs563325510 1387 dbSNP
rs751569005 1389 dbSNP
rs1034564539 1394 dbSNP
rs573788823 1397 dbSNP
rs996698742 1400 dbSNP
rs1014391178 1402 dbSNP
rs1027691791 1403 dbSNP
rs952570111 1405 dbSNP
rs367877599 1411 dbSNP
rs183352586 1413 dbSNP
rs1178396198 1420 dbSNP
rs983904011 1427 dbSNP
rs370319057 1428 dbSNP
rs920375567 1432 dbSNP
rs961608100 1434 dbSNP
rs1479978146 1443 dbSNP
rs1195452156 1444 dbSNP
rs951687935 1445 dbSNP
rs1346570541 1446 dbSNP
rs1414994345 1446 dbSNP
rs1300748756 1449 dbSNP
rs982009994 1453 dbSNP
rs1377274626 1457 dbSNP
rs927629928 1458 dbSNP
rs1306104506 1461 dbSNP
rs937686082 1464 dbSNP
rs1474607250 1465 dbSNP
rs528352318 1466 dbSNP
rs910434956 1467 dbSNP
rs1374949847 1468 dbSNP
rs1171938126 1471 dbSNP
rs1419950423 1482 dbSNP
rs1364727998 1483 dbSNP
rs944635901 1487 dbSNP
rs1451290179 1488 dbSNP
rs1040187050 1491 dbSNP
rs914977692 1492 dbSNP
rs946897235 1496 dbSNP
rs1277574322 1497 dbSNP
rs1385491272 1498 dbSNP
rs1042592814 1504 dbSNP
rs902658503 1506 dbSNP
rs944957128 1507 dbSNP
rs945260205 1510 dbSNP
rs1300304144 1513 dbSNP
rs1041776977 1514 dbSNP
rs904656183 1518 dbSNP
rs1311202882 1519 dbSNP
rs1402056631 1524 dbSNP
rs1232752660 1528 dbSNP
rs1158244285 1529 dbSNP
rs1452023317 1530 dbSNP
rs1040621061 1532 dbSNP
rs1166193836 1533 dbSNP
rs781002276 1544 dbSNP
rs201098769 1545 dbSNP
rs1195272058 1551 dbSNP
rs1237610465 1553 dbSNP
rs894702062 1555 dbSNP
rs1260556030 1558 dbSNP
rs996115405 1560 dbSNP
rs1489306475 1562 dbSNP
rs112115473 1570 dbSNP
rs1254999446 1573 dbSNP
rs1485021041 1575 dbSNP
rs1291481597 1577 dbSNP
rs1332651194 1577 dbSNP
rs897979946 1578 dbSNP
rs1317836170 1581 dbSNP
rs141392869 1588 dbSNP
rs1004896846 1589 dbSNP
rs533125720 1590 dbSNP
rs1415409088 1591 dbSNP
rs1416384883 1598 dbSNP
rs1173492013 1605 dbSNP
rs951780798 1614 dbSNP
rs1417237242 1619 dbSNP
rs1015382241 1623 dbSNP
rs985763110 1625 dbSNP
rs961201427 1629 dbSNP
rs1253374534 1634 dbSNP
rs771162891 1643 dbSNP
rs1034944499 1646 dbSNP
rs1212882054 1647 dbSNP
rs1466996530 1651 dbSNP
rs1364108893 1659 dbSNP
rs959324485 1665 dbSNP
rs115643058 1666 dbSNP
rs1269740802 1670 dbSNP
rs1160608411 1671 dbSNP
rs965766092 1673 dbSNP
rs1373526045 1674 dbSNP
rs914881685 1676 dbSNP
rs1440576351 1683 dbSNP
rs913856364 1686 dbSNP
rs186938400 1690 dbSNP
rs150487070 1691 dbSNP
rs977798343 1694 dbSNP
rs1165701502 1698 dbSNP
rs979239197 1700 dbSNP
rs140696158 1701 dbSNP
rs71715172 1701 dbSNP
rs751826422 1701 dbSNP
rs199746893 1702 dbSNP
rs200669937 1703 dbSNP
rs549306616 1704 dbSNP
rs1452280715 1705 dbSNP
rs1390148176 1712 dbSNP
rs1306944719 1718 dbSNP
rs1182437441 1721 dbSNP
rs1317855678 1722 dbSNP
rs1055829531 1723 dbSNP
rs1041050104 1724 dbSNP
rs1046400368 1728 dbSNP
rs566398186 1728 dbSNP
rs950112832 1728 dbSNP
rs1277682847 1733 dbSNP
rs1369149191 1736 dbSNP
rs145742043 1736 dbSNP
rs900740338 1737 dbSNP
rs1443534750 1746 dbSNP
rs536973504 1747 dbSNP
rs932204857 1752 dbSNP
rs1335728844 1753 dbSNP
rs1211245410 1762 dbSNP
rs535355382 1763 dbSNP
rs1479383037 1768 dbSNP
rs1049067265 1769 dbSNP
rs1172561715 1770 dbSNP
rs887739362 1772 dbSNP
rs368722818 1773 dbSNP
rs1251156090 1774 dbSNP
rs1004929414 1776 dbSNP
rs1231061979 1777 dbSNP
rs1189561470 1778 dbSNP
rs1191502325 1785 dbSNP
rs1036442845 1786 dbSNP
rs542353878 1789 dbSNP
rs966093760 1790 dbSNP
rs138310665 1791 dbSNP
rs1346052191 1795 dbSNP
rs745950849 1796 dbSNP
rs959289518 1799 dbSNP
rs9925950 1800 dbSNP
rs979206558 1801 dbSNP
rs1460558264 1802 dbSNP
rs1278236417 1805 dbSNP
rs1417169359 1806 dbSNP
rs11860971 1807 dbSNP
rs1374711948 1812 dbSNP
rs937873598 1816 dbSNP
rs1449730875 1820 dbSNP
rs1301704350 1821 dbSNP
rs967673127 1822 dbSNP
rs1159417156 1824 dbSNP
rs991525396 1828 dbSNP
rs1405534625 1830 dbSNP
rs1293750164 1843 dbSNP
rs557061891 1847 dbSNP
rs573654472 1850 dbSNP
rs1484750458 1851 dbSNP
rs1280331163 1852 dbSNP
rs1446719332 1854 dbSNP
rs966640329 1857 dbSNP
rs1282682481 1858 dbSNP
rs542838092 1865 dbSNP
rs1292095648 1869 dbSNP
rs1230879319 1873 dbSNP
rs1305185837 1877 dbSNP
rs1289025335 1878 dbSNP
rs898042069 1881 dbSNP
rs1343209557 1883 dbSNP
rs200130343 1885 dbSNP
rs929561272 1886 dbSNP
rs1251443311 1891 dbSNP
rs1417028218 1893 dbSNP
rs976289627 1895 dbSNP
rs1422075142 1901 dbSNP
rs1459031325 1901 dbSNP
rs773612822 1901 dbSNP
rs1049366170 1903 dbSNP
rs1215982497 1903 dbSNP
rs1240701849 1903 dbSNP
rs1191709034 1905 dbSNP
rs1469211634 1907 dbSNP
rs1212378651 1913 dbSNP
rs1273048081 1913 dbSNP
rs750643348 1915 dbSNP
rs1359493311 1917 dbSNP
rs1491045724 1917 dbSNP
rs200853495 1917 dbSNP
rs200431614 1918 dbSNP
rs1441302586 1919 dbSNP
rs922069124 1920 dbSNP
rs1393475296 1921 dbSNP
rs1323731411 1923 dbSNP
rs1356340224 1925 dbSNP
rs1388512487 1925 dbSNP
rs1454937365 1925 dbSNP
rs71134799 1925 dbSNP
rs770435335 1925 dbSNP
rs932235935 1925 dbSNP
rs1454568141 1926 dbSNP
rs112267102 1927 dbSNP
rs559265049 1928 dbSNP
rs909249918 1929 dbSNP
rs940694466 1931 dbSNP
rs1234573485 1933 dbSNP
rs1426753049 1933 dbSNP
rs71382655 1935 dbSNP
rs887933672 1935 dbSNP
rs11647601 1937 dbSNP
rs28506974 1939 dbSNP
rs72227887 1939 dbSNP
rs1175690480 1941 dbSNP
rs1368809510 1941 dbSNP
rs1461505660 1941 dbSNP
rs374280104 1941 dbSNP
rs1401213473 1943 dbSNP
rs1251809553 1945 dbSNP
rs1421366234 1945 dbSNP
rs28447585 1945 dbSNP
rs759418378 1945 dbSNP
rs1003340977 1946 dbSNP
rs1467617743 1947 dbSNP
rs71382656 1947 dbSNP
rs1211138188 1949 dbSNP
rs1240875086 1949 dbSNP
rs12926892 1949 dbSNP
rs1317325772 1949 dbSNP
rs1389612160 1951 dbSNP
rs866160412 1951 dbSNP
rs1348707142 1953 dbSNP
rs1324531822 1955 dbSNP
rs1301341182 1957 dbSNP
rs1375113333 1957 dbSNP
rs1415605518 1957 dbSNP
rs1455616170 1958 dbSNP
rs1188090914 1959 dbSNP
rs1338050632 1959 dbSNP
rs1485074840 1959 dbSNP
rs199897111 1959 dbSNP
rs1253590868 1960 dbSNP
rs1226485519 1961 dbSNP
rs1336922220 1961 dbSNP
rs1486035550 1961 dbSNP
rs200885029 1961 dbSNP
rs1273001153 1963 dbSNP
rs1456079797 1963 dbSNP
rs28677883 1963 dbSNP
rs572664959 1964 dbSNP
rs59443317 1964 dbSNP
rs67856642 1964 dbSNP
rs1194877062 1965 dbSNP
rs1333107439 1965 dbSNP
rs1366210458 1965 dbSNP
rs1428809995 1965 dbSNP
rs8051654 1965 dbSNP
rs1229854135 1967 dbSNP
rs1254014728 1967 dbSNP
rs1282554913 1967 dbSNP
rs28520605 1967 dbSNP
rs1327285575 1968 dbSNP
rs866821276 1969 dbSNP
rs868611599 1971 dbSNP
rs1373669762 1972 dbSNP
rs1437632080 1973 dbSNP
rs564788279 1974 dbSNP
rs1461442951 1975 dbSNP
rs1006134523 1976 dbSNP
rs1169196014 1977 dbSNP
rs199892824 1978 dbSNP
rs1372103429 1979 dbSNP
rs1022921680 1980 dbSNP
rs1164094469 1980 dbSNP
rs1213696165 1981 dbSNP
rs200790093 1982 dbSNP
rs368366287 1982 dbSNP
rs1386314738 1984 dbSNP
rs1399482606 1984 dbSNP
rs74442590 1984 dbSNP
rs868812477 1986 dbSNP
rs1476195111 1987 dbSNP
rs1418672015 1988 dbSNP
rs1319443646 1990 dbSNP
rs1211688058 1991 dbSNP
rs1272506455 1993 dbSNP
rs1468702101 1997 dbSNP
rs1223511826 2001 dbSNP
rs1244161471 2002 dbSNP
rs2161716 2006 dbSNP
rs1464743999 2007 dbSNP
rs1485015704 2008 dbSNP
rs1266713159 2012 dbSNP
rs1334917698 2016 dbSNP
rs1288603151 2019 dbSNP
rs1226238683 2020 dbSNP
rs1363691435 2025 dbSNP
rs543401589 2027 dbSNP
rs1424403575 2032 dbSNP
rs561156986 2035 dbSNP
rs763074949 2038 dbSNP
rs1039194150 2043 dbSNP
rs1164218537 2045 dbSNP
rs1163316281 2046 dbSNP
rs1403705338 2057 dbSNP
rs1417784982 2059 dbSNP
rs563851130 2068 dbSNP
rs1325935790 2069 dbSNP
rs529346665 2070 dbSNP
rs1246641804 2076 dbSNP
rs1429566584 2077 dbSNP
rs1012179728 2080 dbSNP
rs1196041150 2082 dbSNP
rs549423760 2087 dbSNP
rs1245596540 2089 dbSNP
rs759972473 2093 dbSNP
rs1341793776 2094 dbSNP
rs1308772720 2096 dbSNP
rs1273201449 2100 dbSNP
rs966576327 2101 dbSNP
rs566165737 2102 dbSNP
rs1339801967 2105 dbSNP
rs1230928334 2113 dbSNP
rs1000723677 2115 dbSNP
rs1356949397 2116 dbSNP
rs1441504771 2117 dbSNP
rs1366771023 2121 dbSNP
rs1032253806 2125 dbSNP
rs1230030006 2136 dbSNP
rs959195996 2148 dbSNP
rs1281848192 2149 dbSNP
rs1429419933 2158 dbSNP
rs528650365 2159 dbSNP
rs1205666825 2160 dbSNP
rs575078104 2161 dbSNP
rs377494425 2162 dbSNP
rs971518122 2164 dbSNP
rs981823858 2170 dbSNP
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rs1406178080 2179 dbSNP
rs1400521784 2182 dbSNP
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rs1225458378 2187 dbSNP
rs1311742213 2189 dbSNP
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rs1450103406 2196 dbSNP
rs1308769581 2198 dbSNP
rs1277730817 2202 dbSNP
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rs1315040763 2209 dbSNP
rs1466820224 2212 dbSNP
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rs1356114587 2219 dbSNP
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rs1254084383 2243 dbSNP
rs567387355 2249 dbSNP
rs535978218 2258 dbSNP
rs868750369 2267 dbSNP
rs1231677828 2269 dbSNP
rs1227812685 2270 dbSNP
rs1469896035 2280 dbSNP
rs901561755 2282 dbSNP
rs1382624981 2292 dbSNP
rs1432448911 2294 dbSNP
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rs553002122 2305 dbSNP
rs572701225 2306 dbSNP
rs1159090472 2307 dbSNP
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rs368447139 2312 dbSNP
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rs1253785045 2317 dbSNP
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rs756511600 2322 dbSNP
rs1000526196 2324 dbSNP
rs1245767403 2326 dbSNP
rs1032180331 2332 dbSNP
rs1310871566 2336 dbSNP
rs1384218623 2337 dbSNP
rs1326699867 2338 dbSNP
rs1366383000 2340 dbSNP
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rs988227421 2360 dbSNP
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rs1024826043 2373 dbSNP
rs191254659 2385 dbSNP
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rs543804025 2390 dbSNP
rs1268006237 2391 dbSNP
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rs112020272 2400 dbSNP
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rs60164979 2439 dbSNP
rs1305811278 2441 dbSNP
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rs776344828 2516 dbSNP
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rs572000155 2528 dbSNP
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rs950786432 2583 dbSNP
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rs1303877441 2995 dbSNP
rs1309491702 2999 dbSNP
rs972378553 3008 dbSNP
rs202111403 3010 dbSNP
rs954755281 3010 dbSNP
rs1036352277 3016 dbSNP
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rs1308950493 3020 dbSNP
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rs568010698 3044 dbSNP
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rs1222314569 3064 dbSNP
rs780076423 3069 dbSNP
rs978804195 3079 dbSNP
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rs925172728 3085 dbSNP
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rs1427356303 3101 dbSNP
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rs1441343632 3114 dbSNP
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rs1444507546 3120 dbSNP
rs927602194 3123 dbSNP
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rs1047007014 3131 dbSNP
rs1269531611 3139 dbSNP
rs1423339394 3139 dbSNP
rs909801779 3140 dbSNP
rs551829214 3141 dbSNP
rs941138244 3144 dbSNP
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rs1449869029 3150 dbSNP
rs1340911339 3158 dbSNP
rs933225502 3170 dbSNP
rs1361008837 3171 dbSNP
rs1464501521 3172 dbSNP
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rs372653843 3184 dbSNP
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rs1426418952 3191 dbSNP
rs1407456010 3193 dbSNP
rs1157052985 3195 dbSNP
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rs1369470229 3206 dbSNP
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rs1449475854 3211 dbSNP
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rs1250466248 3215 dbSNP
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rs1050072583 3216 dbSNP
rs1323412746 3223 dbSNP
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rs1356758798 3234 dbSNP
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rs1217891821 3264 dbSNP
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rs1366552817 3270 dbSNP
rs1163281310 3275 dbSNP
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rs184843520 3283 dbSNP
rs1239910925 3288 dbSNP
rs1024242624 3289 dbSNP
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rs1427298964 3316 dbSNP
rs960586415 3317 dbSNP
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rs1013135906 3330 dbSNP
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rs539265570 3339 dbSNP
rs1366362752 3341 dbSNP
rs146499878 3347 dbSNP
rs1423122203 3349 dbSNP
rs1163121416 3353 dbSNP
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rs1349708764 3359 dbSNP
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rs1398861156 3378 dbSNP
rs988395127 3379 dbSNP
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rs1203700436 3389 dbSNP
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rs530398315 3395 dbSNP
rs1220949076 3399 dbSNP
rs1050271762 3411 dbSNP
rs910251807 3412 dbSNP
rs757403570 3414 dbSNP
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rs1282866108 3425 dbSNP
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rs559731867 3434 dbSNP
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rs749523816 3466 dbSNP
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rs1176365618 3473 dbSNP
rs1239123706 3475 dbSNP
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rs1052401972 3476 dbSNP
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rs534838821 3478 dbSNP
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rs1057484220 3484 dbSNP
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rs1479073491 3488 dbSNP
rs1331424184 3498 dbSNP
rs1307995061 3499 dbSNP
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rs1371717162 3502 dbSNP
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rs1013206347 3506 dbSNP
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rs1023218559 3517 dbSNP
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rs568925354 3530 dbSNP
rs1000183280 3531 dbSNP
rs774281513 3535 dbSNP
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rs780224763 3538 dbSNP
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rs1034732130 3540 dbSNP
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rs1315484047 3585 dbSNP
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rs113289370 3642 dbSNP
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rs1262579514 3652 dbSNP
rs1204744822 3654 dbSNP
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rs1294253342 3656 dbSNP
rs975725982 3658 dbSNP
rs1186001028 3661 dbSNP
rs921228802 3665 dbSNP
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rs544049810 3671 dbSNP
rs1294183620 3682 dbSNP
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rs2042424 3692 dbSNP
rs187150885 3704 dbSNP
rs986050458 3709 dbSNP
rs566873126 3711 dbSNP
rs577477110 3719 dbSNP
rs1158887139 3724 dbSNP
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rs1192503706 3728 dbSNP
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rs1361821412 3742 dbSNP
rs538141899 3744 dbSNP
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rs1333372888 3748 dbSNP
rs1359647015 3758 dbSNP
rs973496049 3761 dbSNP
rs918890121 3766 dbSNP
rs538990690 3768 dbSNP
rs559132476 3775 dbSNP
rs575689149 3778 dbSNP
rs1325149699 3782 dbSNP
rs769516720 3795 dbSNP
rs1404007355 3800 dbSNP
rs1343380774 3805 dbSNP
rs1044695811 3806 dbSNP
rs1391785094 3807 dbSNP
rs866557383 3809 dbSNP
rs904791379 3815 dbSNP
rs1000427595 3819 dbSNP
rs1395618979 3822 dbSNP
rs1032094071 3825 dbSNP
rs1310309053 3827 dbSNP
rs772990743 3828 dbSNP
rs891763930 3830 dbSNP
rs1460514769 3833 dbSNP
rs1431598033 3839 dbSNP
rs887296958 3844 dbSNP
rs998710622 3845 dbSNP
rs1003949380 3847 dbSNP
rs1016724321 3848 dbSNP
rs1029744990 3849 dbSNP
rs190591636 3850 dbSNP
rs146806312 3851 dbSNP
rs368467296 3852 dbSNP
rs955332854 3863 dbSNP
rs986575459 3866 dbSNP
rs1439475569 3870 dbSNP
rs1239421059 3873 dbSNP
rs1646 3876 dbSNP
rs765796115 3881 dbSNP
rs1454548680 3887 dbSNP
rs574900472 3890 dbSNP
rs1171448480 3895 dbSNP
rs764474624 3899 dbSNP
rs918951582 3905 dbSNP
rs540529888 3913 dbSNP
rs946671015 3919 dbSNP
rs1329239118 3922 dbSNP
rs1045084589 3926 dbSNP
rs1399229173 3929 dbSNP
rs1180249111 3930 dbSNP
rs926843015 3934 dbSNP
rs1244319522 3940 dbSNP
rs1333180267 3944 dbSNP
rs1459599089 3949 dbSNP
rs560375683 3951 dbSNP
rs1349640042 3954 dbSNP
rs1129679 3956 dbSNP
rs948421440 3957 dbSNP
rs1178036536 3959 dbSNP
rs756919594 3961 dbSNP
rs1274321276 3963 dbSNP
rs1056760318 3965 dbSNP
rs1044604240 3971 dbSNP
rs1314298327 3986 dbSNP
rs1452000434 3988 dbSNP
rs1357557695 3992 dbSNP
rs1320509866 3994 dbSNP
rs545393128 4002 dbSNP
rs181944828 4006 dbSNP
rs1256750207 4020 dbSNP
rs1384565113 4023 dbSNP
rs1157144761 4037 dbSNP
rs1457558960 4041 dbSNP
rs1199638512 4047 dbSNP
rs1386335720 4051 dbSNP
rs936261129 4053 dbSNP
rs1243382171 4055 dbSNP
rs1193315095 4056 dbSNP
rs1446012210 4057 dbSNP
rs1129680 4060 dbSNP
rs369620687 4062 dbSNP
rs1359971239 4073 dbSNP
rs1290928607 4077 dbSNP
rs1243749577 4080 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BAC-D2
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1133252. RNA binding protein: AGO2. Condition:Untreated ...

- Majoros WH; Lekprasert P; Mukherjee N; et al., 2013, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uucacccGACCCUAGGCCCGAc 5'
                 :|||   ||||||| 
Target 5' -------UUGG---CCGGGCUu 3'
 		1 - 12
Article - Majoros WH; Lekprasert P; Mukherjee N; et al.
- Nature methods, 2013
High-throughput sequencing has opened numerous possibilities for the identification of regulatory RNA-binding events. Cross-linking and immunoprecipitation of Argonaute proteins can pinpoint a microRNA (miRNA) target site within tens of bases but leaves the identity of the miRNA unresolved. A flexible computational framework, microMUMMIE, integrates sequence with cross-linking features and reliably identifies the miRNA family involved in each binding event. It considerably outperforms sequence-only approaches and quantifies the prevalence of noncanonical binding modes.
LinkOut: [PMID: 23708386]
CLIP-seq Support 1 for dataset GSM1133252
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BAC-D2 / Untreated
Location of target site ENST00000248248.3 | 3UTR | UUGGCCGGGCUUGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23708386 / GSE46611
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KICH -0.634 0.01 -0.336 0.14 12 Click to see details
ESCA 0.834 0.08 0.800 0.1 4 Click to see details
LUSC -0.259 0.1 -0.296 0.07 26 Click to see details
CHOL -0.762 0.12 -0.800 0.1 4 Click to see details
LUAD -0.438 0.14 -0.833 0.01 8 Click to see details
KIRC -0.238 0.16 -0.140 0.28 19 Click to see details
LIHC -0.109 0.26 -0.146 0.19 38 Click to see details
HNSC 0.167 0.26 0.252 0.16 17 Click to see details
BLCA 0.238 0.29 -0.071 0.43 8 Click to see details
THCA 0.072 0.32 0.037 0.41 43 Click to see details
PRAD 0.18 0.37 0.486 0.16 6 Click to see details
BRCA 0.055 0.38 -0.093 0.3 33 Click to see details
UCEC 0.045 0.45 0.191 0.29 11 Click to see details
KIRP -0.02 0.47 0.165 0.3 13 Click to see details
STAD -0.008 0.49 0.033 0.47 9 Click to see details
STAD -0.008 0.49 0.033 0.47 9 Click to see details
STAD -0.008 0.49 0.033 0.47 9 Click to see details
STAD -0.008 0.49 0.033 0.47 9 Click to see details
STAD -0.008 0.49 0.033 0.47 9 Click to see details
42 hsa-miR-3940-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT118010 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 6
MIRT268170 POU2F1 POU class 2 homeobox 1 2 2
MIRT289461 BIRC5 baculoviral IAP repeat containing 5 2 4
MIRT409766 HRH2 histamine receptor H2 2 2
MIRT452070 ZNF585B zinc finger protein 585B 2 8
MIRT458519 GSG2 histone H3 associated protein kinase 2 6
MIRT458657 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT465898 TMEM41B transmembrane protein 41B 2 2
MIRT469877 PURB purine rich element binding protein B 2 4
MIRT470462 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT481439 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT482643 RPL18A ribosomal protein L18a 2 2
MIRT486034 CYTH1 cytohesin 1 2 2
MIRT486423 RXRA retinoid X receptor alpha 2 2
MIRT490254 MFI2 melanotransferrin 2 2
MIRT491213 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT492849 NRGN neurogranin 2 2
MIRT492995 NAV1 neuron navigator 1 2 2
MIRT493423 KDM6B lysine demethylase 6B 2 2
MIRT495331 MON1B MON1 homolog B, secretory trafficking associated 2 2
MIRT496865 C21orf2 chromosome 21 open reading frame 2 2 2
MIRT498435 EHD4 EH domain containing 4 2 2
MIRT514977 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT525668 KXD1 KxDL motif containing 1 2 2
MIRT564349 AKR1B10 aldo-keto reductase family 1 member B10 2 2
MIRT565241 TRAF6 TNF receptor associated factor 6 2 2
MIRT573209 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT635215 ZNF286A zinc finger protein 286A 2 4
MIRT638282 SH2B3 SH2B adaptor protein 3 2 2
MIRT650230 SIGLEC9 sialic acid binding Ig like lectin 9 2 2
MIRT665256 ZNF286B zinc finger protein 286B 2 2
MIRT665833 TIMELESS timeless circadian clock 2 2
MIRT666891 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667161 NRXN3 neurexin 3 2 2
MIRT679853 GPR75 G protein-coupled receptor 75 2 2
MIRT680747 CA5B carbonic anhydrase 5B 2 2
MIRT682071 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT695801 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT705465 ATG9A autophagy related 9A 2 2
MIRT714270 LTBP2 latent transforming growth factor beta binding protein 2 2 2
MIRT716392 NPAS1 neuronal PAS domain protein 1 2 2
MIRT718443 RAB11B RAB11B, member RAS oncogene family 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3940-3p Hydroxycamptothecin (HCPT) NULL 97226 Microarray human Tenon's fibroblasts (HTFs) 24681041 2014 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3940 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-miR-3940-3p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-3940-3p Fluorouracil 3385 NSC19893 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-3940-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3940-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-3940-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CP20)
hsa-miR-3940-3p Fluorouracil 3385 NSC19893 approved resistant cell line (HCT15)
hsa-miR-3940-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-3940-3p Platinum 23939 sensitive tissue (non-small cell lung cancer)
hsa-miR-3940-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3940-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-3940-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-3940-3p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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