pre-miRNA Information
pre-miRNA hsa-mir-4747   
Genomic Coordinates chr19: 4932687 - 4932740
Description Homo sapiens miR-4747 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4747-5p
Sequence 1| AGGGAAGGAGGCUUGGUCUUAG |22
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs560927363 4 dbSNP
rs1471226927 10 dbSNP
rs763137545 12 dbSNP
rs767337154 15 dbSNP
rs775298039 16 dbSNP
rs760472311 19 dbSNP
rs1207950315 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol AHCYL2   
Synonyms ADOHCYASE3, IRBIT2
Description adenosylhomocysteinase like 2
Transcript NM_001130720   
Other Transcripts NM_001130722 , NM_001130723 , NM_015328   
Expression
Putative miRNA Targets on AHCYL2
3'UTR of AHCYL2
(miRNA target sites are highlighted)
>AHCYL2|NM_001130720|3'UTR
   1 GTTCCTGTAACTCAAACCAGAATTTTTAAGGAATAGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGC
  81 AAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCACCCTGTGTGTTAGGTTATTTATTTATTAAAATCAAGAATCCTG
 161 TGCCTGTAGTGTTGGCCCAGAGTGTGGTTACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGA
 241 AATGGGGTTACTGCTCCCAGTGCATCATTTGCATCATTCCCCATTGACTGAATCCTCAGCAGTGGCCGTTTTTCCTCTTG
 321 TCCAGGCTCACGAGTTAGTCCAGGGATTCCATACTCCCTATTCCCTGGAGTTTTCTGGAATAAATTTTCAGCACCTGCTT
 401 TTCTCAGCTTGGCCCTTCCCCGGGTGAGGCCGTTTGGAATTAACATGGCCAGTGTTTCACACAAGATTGGGTTCCCAATC
 481 TTGACCATCACTATCACTGCCTTCTTTATATAAAGGCTAATAAGGAAGGAGTGTTATTTATGGCTTTGCCAAGCTACATC
 561 AAGAACTCAGCTGTGCTGTGCCTACCAGGGGTCTCCTTTCTTACCCAGGACTCCTTTCTTCTCCTTGAATATTTATGTCC
 641 ATTTTAACACTTCCTGGTTGCAAGAGGGATGTGCCTCCATTATTTCCTCCACAGTTTTGGTATTTGTCAGACATTTGTTC
 721 TGCTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTTTTACTTCCTTGTC
 801 ATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAGATTGGCACTATCTCAGAAAAGGAGAGCTTGTTGTGAAACACTGCT
 881 TCCTGAAACTTCCTGCTATTGCCTAAAGCTACGTCTGAAACTGAGTAGGGAAAGGCATACTTTTCCAGGGACTTAGGGGG
 961 ATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCC
1041 AGGAAGGCCATTGCAGTTTGACTGGCTGAGGGATACAGAGATGAAATTGTAAACTGTATCCAGATTATCAAAGCTAATTT
1121 GACTAGTTTGAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATCTGCAGTCTGATCTGTGG
1201 ACTTCTCTGCTGGCATATCTTTTATGATTTAACCTCTTCCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAA
1281 CTCCAGTGCTACAAAAAGAATTAGTAATGTGGTGTGGGCAGCGTGACATTTTATGTCCCACCCAAAAATTGGATTCCTTT
1361 TGGAGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGTTAGTCTGGACTGGCCCTAGGAAA
1441 CTTGAATTAAATAAGCCTCTTCCCCTTACCGATCCTTTTTAACACTCTCAGGTTTGTTTGTTTCCCACTTTTTTCCTATG
1521 CTGGTCTGCCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATCACCAAAACCTTCCCATCC
1601 TGATTCTCTTCTTCTACCTCTACCCTCTCCAACTTCTCCTGGTCTTCACATATACTCTCAAAGCTAGTCTGAAAGTGACC
1681 TTACTTTCGGAAGTAGGGAAGTGGAACTTTGGTAAATGACTGTTTGCCTCATTTAATAGTATACAGGCTCAGCCCATAGA
1761 CTACAGTTCTTCAGAGGCCATATGTCTCAGCAAGTACTGGTTATATTCTTTTTTTGTAAGGAAGATCATAAATGCTAAAA
1841 ATTCCACTAAGCCATTCAGTTCTTCCTTTTGCCTACCTAGTCCTGATTTTTGTATTAATTGGTTCCCTTTAGCAAGGGAT
1921 TCAGATCTTTGTACCTTATCTTATATCCAGAGCAGATTCCATTTGGCAGATAGATGGTCTCTAGCCTATTGTATTCTTAG
2001 ACCAAAAATCATAACCTGCTGTTTCTCAGCAAAGCCTTGCTCTCTGGAGCTTACTATGTGCTGGTACTTAAAGAGTACAT
2081 TCTGCCTTGCTGTAGTGAAGAGACCCACTCCAAATAAAAAAGGGGCCACACGGGGCTTCTAAGTTAGGTTGCCAGTGTTG
2161 CTGCCCATGATGAGTTATTTGCCTCTGAGTTTCAGATGACCTCTCTGTAGGGACACTGTGTTATCAACCATTAAGAAGAA
2241 AGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATCTGGTCATTATTCCCTCTACCCTTGGAATCAG
2321 AGCAATGTGTCTTCTTTCCTCCAACCTCTTACCTTAGATGCATCCTGGTTATCTGGAAGCATGGGAAAGAAGGCTACTTA
2401 TCTCTTTGTATGTGGCTCCAGTCTGTGAGGATACATAACATTTTCTCTACAATGAATCTGTGCTAATATTTTGCCTTCTT
2481 TCTTTCTTTTCTTTTCACCCTTAGAGACAGGGTTTCACTATGTTGCCCAGGCTGGTCTCAAACTCCTGGGCTCAAGCAAT
2561 CCTCCTGCCTCAGCTTCCTGAGTAGCTGGAACCACAGGTGTGTGCTACCGTGCCTGGCACTTTTTTGCCTTCTTAATGGA
2641 GATATTCAGTTTTCTTTTTTTCATTTAAACAAAGAAAAAAAATGTATCTACTCTACCTTCCCTCTGCTCTCCTCCCTCCC
2721 TATCCTACTTGCCCATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTTCGCTTTTCTCTA
2801 AACAGATCTGATATTGCTGCTCCTGTGGTTTTCTCAAAATTAACTTTGCCGTGGTTTTTAAAAAGGAATCAAAATGCATT
2881 GTTGCATTAAGCTTTTTCAATAAAGGAAAATTACGGAAGGAAAATAGGCAACACCAGCAAATTATATGTGGACAGGTTCT
2961 AAACTCTATATATACATATATATATATATATCTATATATCTATATACGTAATCATCTAGTTCTGTCATCTTACTGAAAGG
3041 AATAACACTTCTAAAGATCACCATTTCTGAGAAGTTCTTGGAAATCTTTATGTCTAAGTGATTGTATTAGATCAGCAATA
3121 ATGACTATGTAATCTCAAAAAACAAATAAAATATTCTTAACATGGAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gauucUGGUUCGGA-GGAAGGGa 5'
               |:| | :|| ||||||| 
Target 5' aatgtATCTACTCTACCTTCCCt 3'
2681 - 2703 153.00 -16.10
2
miRNA  3' gauucuGGUUCGGA---GGAAGGGa 5'
                |: |||:|   ||||||| 
Target 5' gcttttCTCAGCTTGGCCCTTCCCc 3'
397 - 421 152.00 -16.30
3
miRNA  3' gauUCUGGUUCGGA-----------GGAAGGGa 5'
             |||||| || |           ||||||| 
Target 5' accAGACCACGCATGATCACCAAAACCTTCCCa 3'
1565 - 1597 151.00 -20.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30109127 59 COSMIC
COSN30452663 65 COSMIC
COSN26965530 86 COSMIC
COSN31612560 105 COSMIC
COSN31595770 110 COSMIC
COSN30767462 112 COSMIC
COSN30178131 122 COSMIC
COSN31602057 164 COSMIC
COSN30540845 176 COSMIC
COSN31495054 187 COSMIC
COSN31495026 188 COSMIC
COSN31486739 199 COSMIC
COSN31586356 248 COSMIC
COSN8515425 276 COSMIC
COSN30164435 475 COSMIC
COSN5647704 519 COSMIC
COSN30175918 639 COSMIC
COSN24979159 745 COSMIC
COSN28726002 871 COSMIC
COSN2201144 925 COSMIC
COSN20091690 1052 COSMIC
COSN2201145 1643 COSMIC
COSN5647705 1744 COSMIC
COSN16415609 2127 COSMIC
COSN5095835 2436 COSMIC
COSN31521261 2662 COSMIC
COSN31551616 2683 COSMIC
COSN31537491 2828 COSMIC
COSN31545079 2845 COSMIC
COSN26563369 2854 COSMIC
COSN23222514 2977 COSMIC
COSN23272732 2991 COSMIC
COSN31539335 2991 COSMIC
COSN15886473 3001 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs986331545 4 dbSNP
rs755046769 5 dbSNP
rs765858118 8 dbSNP
rs753302438 9 dbSNP
rs1347847820 13 dbSNP
rs758940203 14 dbSNP
rs1025040608 16 dbSNP
rs528333134 17 dbSNP
rs1321479965 19 dbSNP
rs969465582 31 dbSNP
rs184185024 35 dbSNP
rs1350147447 37 dbSNP
rs1203623737 42 dbSNP
rs1438307778 43 dbSNP
rs1396168451 45 dbSNP
rs1270756165 46 dbSNP
rs1376487054 47 dbSNP
rs1490470558 48 dbSNP
rs1327018670 50 dbSNP
rs974115367 57 dbSNP
rs572025369 63 dbSNP
rs1170212774 78 dbSNP
rs1476017141 80 dbSNP
rs981148464 94 dbSNP
rs763133675 100 dbSNP
rs1470011540 104 dbSNP
rs929977211 111 dbSNP
rs1397994762 112 dbSNP
rs1047091520 117 dbSNP
rs1270605550 118 dbSNP
rs1294961313 132 dbSNP
rs958530789 145 dbSNP
rs1216307808 156 dbSNP
rs4728164 168 dbSNP
rs914166286 170 dbSNP
rs1247045843 171 dbSNP
rs933464899 193 dbSNP
rs866284048 212 dbSNP
rs1051882880 216 dbSNP
rs912279340 223 dbSNP
rs1372738921 225 dbSNP
rs752082630 229 dbSNP
rs1303598361 234 dbSNP
rs560679300 236 dbSNP
rs1217849888 244 dbSNP
rs751579586 245 dbSNP
rs1331260627 248 dbSNP
rs942487177 253 dbSNP
rs1171863982 257 dbSNP
rs189033986 259 dbSNP
rs1395763374 263 dbSNP
rs1487604059 279 dbSNP
rs1039773026 292 dbSNP
rs1468775249 296 dbSNP
rs764751759 308 dbSNP
rs1011779210 309 dbSNP
rs543254583 310 dbSNP
rs1279443861 312 dbSNP
rs995816659 322 dbSNP
rs555737120 327 dbSNP
rs145308063 328 dbSNP
rs887042884 332 dbSNP
rs1188990579 333 dbSNP
rs1280398627 341 dbSNP
rs777485904 342 dbSNP
rs1443588901 345 dbSNP
rs1159028713 346 dbSNP
rs1362156725 355 dbSNP
rs1281666200 356 dbSNP
rs1443313279 376 dbSNP
rs1340403937 399 dbSNP
rs998893953 416 dbSNP
rs1030003424 420 dbSNP
rs375368015 422 dbSNP
rs111621509 423 dbSNP
rs1002334150 427 dbSNP
rs572612190 429 dbSNP
rs963163910 430 dbSNP
rs925704840 433 dbSNP
rs1256532186 460 dbSNP
rs1185784971 469 dbSNP
rs1486595587 470 dbSNP
rs1214402051 472 dbSNP
rs1280463757 472 dbSNP
rs532265278 479 dbSNP
rs1285835098 500 dbSNP
rs1223988728 510 dbSNP
rs746626468 511 dbSNP
rs1291796562 512 dbSNP
rs920004578 522 dbSNP
rs1402797356 539 dbSNP
rs1397883073 541 dbSNP
rs988563049 544 dbSNP
rs914114167 554 dbSNP
rs1310617633 561 dbSNP
rs757305251 563 dbSNP
rs983148639 588 dbSNP
rs374977605 591 dbSNP
rs987591105 592 dbSNP
rs1241077487 594 dbSNP
rs910758162 596 dbSNP
rs942424376 598 dbSNP
rs1258073151 605 dbSNP
rs1185436997 637 dbSNP
rs538022281 642 dbSNP
rs1311728701 649 dbSNP
rs1352054154 651 dbSNP
rs182261295 654 dbSNP
rs1271695221 665 dbSNP
rs560258598 688 dbSNP
rs1336125589 689 dbSNP
rs1484495195 690 dbSNP
rs1213315785 726 dbSNP
rs894751408 733 dbSNP
rs1289498987 736 dbSNP
rs919685015 741 dbSNP
rs930970909 745 dbSNP
rs1047173612 781 dbSNP
rs757018721 784 dbSNP
rs1462762060 786 dbSNP
rs902897371 790 dbSNP
rs998636124 799 dbSNP
rs1426641480 800 dbSNP
rs1240652084 809 dbSNP
rs781556094 813 dbSNP
rs1186551525 816 dbSNP
rs1030384099 829 dbSNP
rs1250690656 834 dbSNP
rs879764667 836 dbSNP
rs886992371 836 dbSNP
rs1215946154 843 dbSNP
rs890115003 844 dbSNP
rs541702447 846 dbSNP
rs1017473161 849 dbSNP
rs1296416352 851 dbSNP
rs542018632 879 dbSNP
rs750903186 898 dbSNP
rs1417133663 906 dbSNP
rs376861527 913 dbSNP
rs147648646 914 dbSNP
rs1441899208 923 dbSNP
rs1391250865 926 dbSNP
rs1297365083 951 dbSNP
rs1026106223 952 dbSNP
rs1356156571 953 dbSNP
rs1002459257 954 dbSNP
rs1453197737 956 dbSNP
rs951521869 957 dbSNP
rs71579852 960 dbSNP
rs1334809885 975 dbSNP
rs376930483 995 dbSNP
rs775506971 1004 dbSNP
rs1163148663 1013 dbSNP
rs958363483 1015 dbSNP
rs1175801038 1016 dbSNP
rs1009536729 1023 dbSNP
rs1210798344 1023 dbSNP
rs1252339724 1023 dbSNP
rs1345890873 1027 dbSNP
rs1282538427 1028 dbSNP
rs1235353068 1031 dbSNP
rs1335358288 1035 dbSNP
rs370214963 1040 dbSNP
rs749277537 1044 dbSNP
rs960047856 1049 dbSNP
rs187134003 1055 dbSNP
rs916155985 1062 dbSNP
rs140280980 1071 dbSNP
rs1223599033 1078 dbSNP
rs1302363766 1080 dbSNP
rs192414742 1088 dbSNP
rs1043225659 1089 dbSNP
rs1157383009 1090 dbSNP
rs1231635753 1095 dbSNP
rs1421324266 1096 dbSNP
rs1252979148 1101 dbSNP
rs1187933291 1102 dbSNP
rs1484960360 1110 dbSNP
rs1017715346 1111 dbSNP
rs934856108 1127 dbSNP
rs1350244994 1129 dbSNP
rs1259116211 1135 dbSNP
rs1241446568 1137 dbSNP
rs964879036 1138 dbSNP
rs1288719276 1139 dbSNP
rs12112383 1140 dbSNP
rs144244717 1141 dbSNP
rs1314194864 1142 dbSNP
rs1396042842 1143 dbSNP
rs931066512 1148 dbSNP
rs535879131 1171 dbSNP
rs1239646473 1177 dbSNP
rs1479432033 1178 dbSNP
rs1413213427 1181 dbSNP
rs1176417874 1186 dbSNP
rs536750643 1188 dbSNP
rs1474526802 1189 dbSNP
rs1434677125 1194 dbSNP
rs1026075041 1211 dbSNP
rs180850541 1215 dbSNP
rs1046316268 1216 dbSNP
rs1259727160 1218 dbSNP
rs905125295 1225 dbSNP
rs1207163944 1226 dbSNP
rs950567019 1229 dbSNP
rs1268558752 1231 dbSNP
rs1428483147 1235 dbSNP
rs1003808230 1247 dbSNP
rs1035775275 1248 dbSNP
rs1295127979 1254 dbSNP
rs1245416649 1261 dbSNP
rs4731575 1262 dbSNP
rs1054034252 1267 dbSNP
rs185476772 1282 dbSNP
rs968931850 1284 dbSNP
rs1325664284 1286 dbSNP
rs978997751 1289 dbSNP
rs576989935 1292 dbSNP
rs199985318 1293 dbSNP
rs773323686 1294 dbSNP
rs1283251472 1295 dbSNP
rs1052399033 1305 dbSNP
rs760868134 1323 dbSNP
rs540944255 1324 dbSNP
rs559632883 1328 dbSNP
rs911612457 1341 dbSNP
rs1291738059 1342 dbSNP
rs190078949 1343 dbSNP
rs1338622969 1348 dbSNP
rs1228901719 1349 dbSNP
rs1267923537 1349 dbSNP
rs1274418611 1350 dbSNP
rs766649431 1364 dbSNP
rs769260132 1383 dbSNP
rs965334791 1388 dbSNP
rs1365477763 1391 dbSNP
rs751365635 1395 dbSNP
rs543088895 1405 dbSNP
rs1305420995 1408 dbSNP
rs147797270 1413 dbSNP
rs1028275026 1415 dbSNP
rs762247880 1415 dbSNP
rs563343637 1417 dbSNP
rs531802197 1421 dbSNP
rs1196983472 1422 dbSNP
rs1394903760 1442 dbSNP
rs140201150 1453 dbSNP
rs1268119320 1456 dbSNP
rs1478082448 1459 dbSNP
rs908196165 1463 dbSNP
rs1394548226 1470 dbSNP
rs113537738 1471 dbSNP
rs571722570 1472 dbSNP
rs1417393797 1490 dbSNP
rs1047616725 1493 dbSNP
rs1199245252 1516 dbSNP
rs1409436566 1537 dbSNP
rs757005225 1540 dbSNP
rs1165833974 1550 dbSNP
rs981774002 1553 dbSNP
rs1351803413 1557 dbSNP
rs1423155010 1559 dbSNP
rs1302883745 1561 dbSNP
rs532770778 1575 dbSNP
rs547757854 1576 dbSNP
rs950009619 1578 dbSNP
rs1372667200 1580 dbSNP
rs1275830834 1585 dbSNP
rs1441858682 1600 dbSNP
rs1331533786 1607 dbSNP
rs1334351146 1607 dbSNP
rs1053623716 1619 dbSNP
rs1402338703 1620 dbSNP
rs1268924722 1623 dbSNP
rs893652567 1624 dbSNP
rs1171806901 1631 dbSNP
rs1436845148 1635 dbSNP
rs1426068333 1636 dbSNP
rs566073944 1641 dbSNP
rs1469495952 1643 dbSNP
rs1230946452 1660 dbSNP
rs1184316062 1665 dbSNP
rs1483321878 1671 dbSNP
rs1256232268 1675 dbSNP
rs1208036303 1676 dbSNP
rs182685639 1689 dbSNP
rs1278801563 1690 dbSNP
rs1042424604 1694 dbSNP
rs890559199 1703 dbSNP
rs753245112 1704 dbSNP
rs1008814819 1715 dbSNP
rs1361087008 1717 dbSNP
rs1355333675 1718 dbSNP
rs895879247 1721 dbSNP
rs1018029876 1728 dbSNP
rs1359808008 1735 dbSNP
rs900748379 1738 dbSNP
rs995538770 1741 dbSNP
rs1290673654 1742 dbSNP
rs1027805732 1751 dbSNP
rs1161055826 1755 dbSNP
rs950978799 1759 dbSNP
rs1005071352 1765 dbSNP
rs1472889858 1781 dbSNP
rs1417001669 1782 dbSNP
rs1488582950 1783 dbSNP
rs1483982030 1784 dbSNP
rs571607012 1784 dbSNP
rs1378754022 1787 dbSNP
rs1240279061 1789 dbSNP
rs1444884662 1798 dbSNP
rs554098086 1806 dbSNP
rs1270448983 1809 dbSNP
rs763593358 1810 dbSNP
rs1229335816 1811 dbSNP
rs569325918 1812 dbSNP
rs1334774827 1818 dbSNP
rs763673371 1819 dbSNP
rs1292054837 1834 dbSNP
rs1475148758 1835 dbSNP
rs1230511475 1842 dbSNP
rs1380040196 1848 dbSNP
rs1269635421 1852 dbSNP
rs1428919911 1870 dbSNP
rs1394490080 1871 dbSNP
rs1391044800 1875 dbSNP
rs981763938 1881 dbSNP
rs1031915370 1887 dbSNP
rs1416270663 1891 dbSNP
rs1425456326 1894 dbSNP
rs926321085 1895 dbSNP
rs1185381898 1896 dbSNP
rs1474232751 1897 dbSNP
rs956499577 1899 dbSNP
rs1442938058 1913 dbSNP
rs1163359058 1918 dbSNP
rs987619229 1922 dbSNP
rs1224476327 1927 dbSNP
rs959300543 1935 dbSNP
rs1272404216 1944 dbSNP
rs1361641539 1945 dbSNP
rs1421903536 1951 dbSNP
rs943092782 1953 dbSNP
rs1298696274 1957 dbSNP
rs150235131 1962 dbSNP
rs974450434 1967 dbSNP
rs1291534295 1989 dbSNP
rs915175029 1991 dbSNP
rs558645657 2001 dbSNP
rs1169143627 2003 dbSNP
rs73721732 2016 dbSNP
rs568565016 2019 dbSNP
rs529358744 2020 dbSNP
rs1391471614 2022 dbSNP
rs868800356 2025 dbSNP
rs751135879 2028 dbSNP
rs1251553221 2031 dbSNP
rs911943243 2033 dbSNP
rs71579854 2035 dbSNP
rs1039034489 2043 dbSNP
rs552986988 2049 dbSNP
rs995088110 2058 dbSNP
rs1275409787 2082 dbSNP
rs1665105 2093 dbSNP
rs542152499 2097 dbSNP
rs1388233416 2104 dbSNP
rs559290780 2106 dbSNP
rs1005018950 2117 dbSNP
rs1297601196 2130 dbSNP
rs113622377 2131 dbSNP
rs970461175 2132 dbSNP
rs531761584 2133 dbSNP
rs1375511523 2134 dbSNP
rs1003317587 2142 dbSNP
rs956291852 2152 dbSNP
rs1434183096 2154 dbSNP
rs1250239025 2156 dbSNP
rs1176027919 2164 dbSNP
rs1484300416 2165 dbSNP
rs115592206 2168 dbSNP
rs1183288997 2171 dbSNP
rs1019222320 2183 dbSNP
rs1258059091 2187 dbSNP
rs1381115717 2197 dbSNP
rs959268706 2200 dbSNP
rs145880615 2204 dbSNP
rs920336780 2207 dbSNP
rs1226527109 2208 dbSNP
rs1352198493 2215 dbSNP
rs1308119465 2217 dbSNP
rs915105206 2226 dbSNP
rs1399427342 2233 dbSNP
rs1304284488 2237 dbSNP
rs966606908 2246 dbSNP
rs930402612 2253 dbSNP
rs532588987 2263 dbSNP
rs983098564 2267 dbSNP
rs1157139708 2288 dbSNP
rs1157337661 2298 dbSNP
rs977887623 2302 dbSNP
rs1187860811 2303 dbSNP
rs74521957 2304 dbSNP
rs944777002 2320 dbSNP
rs1056767925 2337 dbSNP
rs565938416 2339 dbSNP
rs1201289179 2345 dbSNP
rs1407738584 2349 dbSNP
rs895103142 2354 dbSNP
rs1206523289 2368 dbSNP
rs1446314 2369 dbSNP
rs1288985700 2373 dbSNP
rs922055685 2388 dbSNP
rs551628242 2397 dbSNP
rs548492200 2402 dbSNP
rs1314200146 2405 dbSNP
rs1396274389 2410 dbSNP
rs904570553 2411 dbSNP
rs1318968496 2415 dbSNP
rs886680329 2416 dbSNP
rs879446356 2419 dbSNP
rs1164895239 2424 dbSNP
rs569287092 2430 dbSNP
rs777785081 2441 dbSNP
rs1005175884 2446 dbSNP
rs1472080214 2449 dbSNP
rs1045913662 2450 dbSNP
rs907398772 2452 dbSNP
rs1370299088 2457 dbSNP
rs780246454 2461 dbSNP
rs1188273830 2463 dbSNP
rs1053096748 2468 dbSNP
rs1246341196 2476 dbSNP
rs1190747883 2483 dbSNP
rs1355677837 2483 dbSNP
rs749425297 2486 dbSNP
rs539116358 2487 dbSNP
rs1264920248 2491 dbSNP
rs1321555978 2498 dbSNP
rs1213032954 2499 dbSNP
rs1001722407 2501 dbSNP
rs1008920852 2505 dbSNP
rs1244798033 2513 dbSNP
rs1325345533 2520 dbSNP
rs1295026438 2532 dbSNP
rs1436807681 2534 dbSNP
rs1019609337 2537 dbSNP
rs1180120668 2540 dbSNP
rs1033823026 2551 dbSNP
rs1232610143 2570 dbSNP
rs964965831 2579 dbSNP
rs1478554784 2590 dbSNP
rs894898293 2598 dbSNP
rs1427779926 2601 dbSNP
rs747127497 2603 dbSNP
rs770991967 2610 dbSNP
rs776926360 2611 dbSNP
rs1388387809 2621 dbSNP
rs951770651 2621 dbSNP
rs1392712501 2623 dbSNP
rs1450290882 2628 dbSNP
rs571488836 2632 dbSNP
rs1197831744 2633 dbSNP
rs978004937 2638 dbSNP
rs112482754 2645 dbSNP
rs965823363 2646 dbSNP
rs1210350261 2647 dbSNP
rs1436891569 2654 dbSNP
rs1285164976 2671 dbSNP
rs907641692 2675 dbSNP
rs960650876 2675 dbSNP
rs536819599 2683 dbSNP
rs1303143795 2685 dbSNP
rs1434674677 2687 dbSNP
rs1333182454 2691 dbSNP
rs375116131 2694 dbSNP
rs1324847695 2696 dbSNP
rs921975837 2698 dbSNP
rs916469573 2700 dbSNP
rs1368833354 2705 dbSNP
rs1258723374 2723 dbSNP
rs570571570 2725 dbSNP
rs930777927 2729 dbSNP
rs947956158 2731 dbSNP
rs1043556691 2737 dbSNP
rs1194357148 2738 dbSNP
rs1272559684 2740 dbSNP
rs985191473 2745 dbSNP
rs1476952446 2746 dbSNP
rs1379135615 2748 dbSNP
rs1202015660 2750 dbSNP
rs1482666711 2751 dbSNP
rs534419966 2755 dbSNP
rs1206602936 2765 dbSNP
rs1277554892 2769 dbSNP
rs907896813 2770 dbSNP
rs1347637888 2775 dbSNP
rs1275776921 2776 dbSNP
rs925119685 2777 dbSNP
rs940909134 2786 dbSNP
rs553161129 2788 dbSNP
rs1373204781 2790 dbSNP
rs1045985599 2791 dbSNP
rs1332502965 2804 dbSNP
rs907470970 2804 dbSNP
rs144987824 2812 dbSNP
rs1427050069 2820 dbSNP
rs550384752 2822 dbSNP
rs148313959 2826 dbSNP
rs770192843 2842 dbSNP
rs1409574160 2844 dbSNP
rs191642620 2851 dbSNP
rs1010696150 2852 dbSNP
rs1021900703 2861 dbSNP
rs576492304 2865 dbSNP
rs1207633884 2871 dbSNP
rs569770429 2871 dbSNP
rs1443747404 2875 dbSNP
rs1279809104 2878 dbSNP
rs1363640042 2884 dbSNP
rs1327522301 2885 dbSNP
rs1290815077 2889 dbSNP
rs902219562 2891 dbSNP
rs900723152 2901 dbSNP
rs996402112 2904 dbSNP
rs141476088 2915 dbSNP
rs1225296038 2916 dbSNP
rs1334567499 2917 dbSNP
rs1018795451 2921 dbSNP
rs780542970 2922 dbSNP
rs1161342939 2926 dbSNP
rs974971929 2959 dbSNP
rs183793611 2967 dbSNP
rs960497479 2969 dbSNP
rs992197500 2971 dbSNP
rs952207920 2973 dbSNP
rs1209940930 2976 dbSNP
rs553787950 2976 dbSNP
rs773873805 2976 dbSNP
rs368282301 2977 dbSNP
rs1321596276 2979 dbSNP
rs969266001 2983 dbSNP
rs1297212786 2985 dbSNP
rs979329525 2985 dbSNP
rs984921079 2985 dbSNP
rs907971475 2987 dbSNP
rs1362815484 2988 dbSNP
rs577222851 2989 dbSNP
rs202010366 2991 dbSNP
rs913273604 2991 dbSNP
rs1162595107 2993 dbSNP
rs188676975 2993 dbSNP
rs1040328477 2995 dbSNP
rs900523043 2995 dbSNP
rs1167620696 2999 dbSNP
rs1447247578 3001 dbSNP
rs1250318032 3007 dbSNP
rs928839261 3008 dbSNP
rs932008434 3009 dbSNP
rs937643631 3013 dbSNP
rs1049299576 3016 dbSNP
rs888070208 3017 dbSNP
rs1224404909 3022 dbSNP
rs763503915 3023 dbSNP
rs1273968629 3025 dbSNP
rs193297939 3031 dbSNP
rs1299559533 3048 dbSNP
rs946448397 3050 dbSNP
rs769275516 3054 dbSNP
rs1165258717 3057 dbSNP
rs1366627700 3087 dbSNP
rs1291766394 3089 dbSNP
rs888525321 3093 dbSNP
rs896203178 3096 dbSNP
rs559492144 3097 dbSNP
rs183586671 3098 dbSNP
rs999110045 3099 dbSNP
rs1040048721 3113 dbSNP
rs1380629689 3116 dbSNP
rs1391566464 3125 dbSNP
rs901753153 3129 dbSNP
rs1168829967 3144 dbSNP
rs1317681542 3155 dbSNP
rs761396141 3163 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BAC
Disease MIMAT0019882
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020023. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gauucugguUCGGAGGAAGGGa 5'
                   :||  ||||||| 
Target 5' -------uuGGC--CCUUCCCc 3'
1 - 13
Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM1020023
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BAC / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000325006.3 | 3UTR | UUGGCCCUUCCCCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
215 hsa-miR-4747-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061689 BTG2 BTG anti-proliferation factor 2 2 2
MIRT062834 BCL7A BCL tumor suppressor 7A 2 2
MIRT079371 CCDC137 coiled-coil domain containing 137 2 2
MIRT081190 MIDN midnolin 2 4
MIRT081724 ZNF507 zinc finger protein 507 2 2
MIRT110565 ZMYND11 zinc finger MYND-type containing 11 2 2
MIRT133724 SKI SKI proto-oncogene 2 4
MIRT146689 MINK1 misshapen like kinase 1 2 2
MIRT150676 SLC27A1 solute carrier family 27 member 1 2 2
MIRT159196 NRBP1 nuclear receptor binding protein 1 2 2
MIRT180865 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT190659 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT196111 MPRIP myosin phosphatase Rho interacting protein 2 2
MIRT232390 SP1 Sp1 transcription factor 2 2
MIRT331070 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 4
MIRT338632 SHMT2 serine hydroxymethyltransferase 2 2 2
MIRT407441 CTDSP1 CTD small phosphatase 1 2 2
MIRT444276 NKX6-1 NK6 homeobox 1 2 2
MIRT444834 PDE6D phosphodiesterase 6D 2 2
MIRT445452 EXT1 exostosin glycosyltransferase 1 2 2
MIRT445644 NPY4R neuropeptide Y receptor Y4 2 2
MIRT446157 RPL12 ribosomal protein L12 2 2
MIRT446608 HIP1 huntingtin interacting protein 1 2 2
MIRT447108 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT449314 MRO maestro 2 2
MIRT450305 DRAXIN dorsal inhibitory axon guidance protein 2 2
MIRT451245 ZNF444 zinc finger protein 444 2 2
MIRT451714 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT451908 ILK integrin linked kinase 2 2
MIRT452183 KIAA1456 KIAA1456 2 2
MIRT452610 REPIN1 replication initiator 1 2 2
MIRT453422 GLG1 golgi glycoprotein 1 2 2
MIRT454006 ALKBH5 alkB homolog 5, RNA demethylase 2 2
MIRT455072 ARHGAP39 Rho GTPase activating protein 39 2 2
MIRT455319 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT455357 KDM5C lysine demethylase 5C 2 2
MIRT455589 TAF12 TATA-box binding protein associated factor 12 2 2
MIRT455711 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT455860 TMEM254 transmembrane protein 254 2 2
MIRT455919 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 2
MIRT455946 CYP4A22 cytochrome P450 family 4 subfamily A member 22 2 2
MIRT456935 LRP10 LDL receptor related protein 10 2 2
MIRT457223 AP3D1 adaptor related protein complex 3 delta 1 subunit 2 2
MIRT457431 NOL10 nucleolar protein 10 2 2
MIRT457470 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457907 ZNF212 zinc finger protein 212 2 2
MIRT458046 TSEN54 tRNA splicing endonuclease subunit 54 2 2
MIRT458073 RNLS renalase, FAD dependent amine oxidase 2 2
MIRT458234 NXPH3 neurexophilin 3 2 2
MIRT458307 TNFAIP8L3 TNF alpha induced protein 8 like 3 2 2
MIRT458378 ITM2C integral membrane protein 2C 2 2
MIRT458967 ZNF436 zinc finger protein 436 2 2
MIRT459099 CYP4A11 cytochrome P450 family 4 subfamily A member 11 2 2
MIRT459446 TMEM37 transmembrane protein 37 2 2
MIRT459671 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT460727 ASXL3 additional sex combs like 3, transcriptional regulator 2 2
MIRT460744 SRP14 signal recognition particle 14 2 2
MIRT461531 C14orf1 ergosterol biosynthesis 28 homolog 2 2
MIRT461752 DDX11 DEAD/H-box helicase 11 2 2
MIRT461837 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT462019 RIF1 replication timing regulatory factor 1 2 2
MIRT462631 PHF5A PHD finger protein 5A 2 2
MIRT462772 ZNF8 zinc finger protein 8 2 2
MIRT463032 ZNF689 zinc finger protein 689 2 2
MIRT463886 WNT7B Wnt family member 7B 2 2
MIRT463995 WDTC1 WD and tetratricopeptide repeats 1 2 2
MIRT464371 URM1 ubiquitin related modifier 1 2 2
MIRT465342 TPM3 tropomyosin 3 2 4
MIRT465515 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465602 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT465697 TNPO2 transportin 2 2 10
MIRT466988 SSRP1 structure specific recognition protein 1 2 4
MIRT467630 SLC7A5 solute carrier family 7 member 5 2 2
MIRT468132 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT468322 SF3B3 splicing factor 3b subunit 3 2 2
MIRT468502 SESN2 sestrin 2 2 2
MIRT468881 RREB1 ras responsive element binding protein 1 2 2
MIRT469322 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT469562 RARA retinoic acid receptor alpha 2 2
MIRT469898 PTRF caveolae associated protein 1 2 2
MIRT470045 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT470068 PTGES2 prostaglandin E synthase 2 2 2
MIRT470238 PRRC2A proline rich coiled-coil 2A 2 2
MIRT470390 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT470500 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT470689 POLR2D RNA polymerase II subunit D 2 2
MIRT470704 POGK pogo transposable element derived with KRAB domain 2 2
MIRT471083 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472482 NACC2 NACC family member 2 2 2
MIRT473583 MAT2A methionine adenosyltransferase 2A 2 2
MIRT474554 KLHDC3 kelch domain containing 3 2 2
MIRT474651 KLF13 Kruppel like factor 13 2 2
MIRT474843 KHSRP KH-type splicing regulatory protein 2 2
MIRT474934 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT475573 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT476045 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT476080 GRB2 growth factor receptor bound protein 2 2 2
MIRT476440 GBA2 glucosylceramidase beta 2 2 2
MIRT476764 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT478785 CRTC2 CREB regulated transcription coactivator 2 2 2
MIRT479287 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT479505 CDH6 cadherin 6 2 2
MIRT479732 CCND1 cyclin D1 2 6
MIRT480352 C5orf24 chromosome 5 open reading frame 24 2 2
MIRT480407 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT480859 BHLHB9 basic helix-loop-helix family member b9 2 2
MIRT481445 ARRB2 arrestin beta 2 2 2
MIRT481732 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT481824 AP2M1 adaptor related protein complex 2 mu 1 subunit 2 2
MIRT482566 ABHD2 abhydrolase domain containing 2 2 2
MIRT482607 ABHD14B abhydrolase domain containing 14B 2 2
MIRT483144 SYCE1L synaptonemal complex central element protein 1 like 2 2
MIRT483214 APOA1 apolipoprotein A1 2 6
MIRT483878 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT483917 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 2
MIRT483939 LENG8 leukocyte receptor cluster member 8 2 4
MIRT484420 SNX19 sorting nexin 19 2 2
MIRT484489 SLC9A1 solute carrier family 9 member A1 2 2
MIRT484612 SIX3 SIX homeobox 3 2 6
MIRT484705 RNF11 ring finger protein 11 2 2
MIRT485107 SHISA6 shisa family member 6 2 2
MIRT485354 MYO1C myosin IC 2 4
MIRT485609 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT487311 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT487417 CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 2 2
MIRT487695 CDK14 cyclin dependent kinase 14 2 2
MIRT487791 GPR20 G protein-coupled receptor 20 2 4
MIRT488042 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT488058 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT488237 DNLZ DNL-type zinc finger 2 4
MIRT488764 FXYD1 FXYD domain containing ion transport regulator 1 2 2
MIRT489401 TUBB2A tubulin beta 2A class IIa 2 2
MIRT489777 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT490099 FN3K fructosamine 3 kinase 2 2
MIRT490290 ISL2 ISL LIM homeobox 2 2 2
MIRT490378 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT491329 GFER growth factor, augmenter of liver regeneration 2 2
MIRT491435 MSX2 msh homeobox 2 2 2
MIRT491769 ZNF385A zinc finger protein 385A 2 2
MIRT491922 WNK2 WNK lysine deficient protein kinase 2 2 2
MIRT491983 UNK unkempt family zinc finger 2 2
MIRT492228 SLC48A1 solute carrier family 48 member 1 2 2
MIRT492404 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT492767 PDGFB platelet derived growth factor subunit B 2 2
MIRT492966 NCS1 neuronal calcium sensor 1 2 2
MIRT493295 LLGL2 LLGL2, scribble cell polarity complex component 2 2
MIRT493650 HDLBP high density lipoprotein binding protein 2 2
MIRT493913 FAM127B retrotransposon Gag like 8A 2 4
MIRT495601 NKX2-5 NK2 homeobox 5 2 2
MIRT496875 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT498514 MYH14 myosin heavy chain 14 2 2
MIRT499178 RBPJL recombination signal binding protein for immunoglobulin kappa J region like 2 2
MIRT502143 KIF5B kinesin family member 5B 2 8
MIRT502692 CSNK1G1 casein kinase 1 gamma 1 2 4
MIRT508460 HOXB6 homeobox B6 2 4
MIRT510430 ZNF207 zinc finger protein 207 2 6
MIRT511837 GPATCH8 G-patch domain containing 8 2 4
MIRT512368 CPM carboxypeptidase M 2 2
MIRT512506 BTBD19 BTB domain containing 19 2 2
MIRT513065 ANKRD45 ankyrin repeat domain 45 2 2
MIRT513267 SCUBE1 signal peptide, CUB domain and EGF like domain containing 1 2 4
MIRT513575 EVX1 even-skipped homeobox 1 2 2
MIRT515051 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515790 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT521657 PRKD3 protein kinase D3 2 2
MIRT522679 LUZP1 leucine zipper protein 1 2 6
MIRT528845 RAB32 RAB32, member RAS oncogene family 2 2
MIRT533569 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT543738 DHCR7 7-dehydrocholesterol reductase 2 2
MIRT544295 TSPYL1 TSPY like 1 2 2
MIRT544857 MYH2 myosin heavy chain 2 2 4
MIRT557323 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT560522 TMEM98 transmembrane protein 98 2 2
MIRT561565 SLC6A9 solute carrier family 6 member 9 2 2
MIRT562374 ERI2 ERI1 exoribonuclease family member 2 2 2
MIRT565780 SEMA6D semaphorin 6D 2 2
MIRT569548 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT569944 PRRT2 proline rich transmembrane protein 2 2 2
MIRT570016 COL1A2 collagen type I alpha 2 chain 2 2
MIRT572163 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT572322 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT573495 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT574139 MARVELD1 MARVEL domain containing 1 2 2
MIRT609449 CCDC149 coiled-coil domain containing 149 2 2
MIRT610619 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT623355 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT629854 ACOX1 acyl-CoA oxidase 1 2 2
MIRT630516 CDC73 cell division cycle 73 2 2
MIRT632535 PSMB2 proteasome subunit beta 2 2 2
MIRT633975 SLC35E2 solute carrier family 35 member E2 2 2
MIRT636408 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT641722 LTBR lymphotoxin beta receptor 2 2
MIRT642661 RGS6 regulator of G protein signaling 6 2 2
MIRT649649 MAST3 microtubule associated serine/threonine kinase 3 2 2
MIRT650367 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT651355 ZBTB40 zinc finger and BTB domain containing 40 2 2
MIRT664840 HUS1 HUS1 checkpoint clamp component 2 2
MIRT667322 MYH9 myosin heavy chain 9 2 2
MIRT670680 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT674922 TRPM6 transient receptor potential cation channel subfamily M member 6 2 2
MIRT675919 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT676493 GJD3 gap junction protein delta 3 2 2
MIRT680162 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT688008 GSN gelsolin 2 2
MIRT688997 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT700337 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT701344 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT703519 FKBP15 FK506 binding protein 15 2 2
MIRT703901 EPT1 selenoprotein I 2 2
MIRT705565 ARHGEF18 Rho/Rac guanine nucleotide exchange factor 18 2 2
MIRT709709 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT713108 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT718426 ZNF85 zinc finger protein 85 2 2
MIRT719236 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719326 STAC SH3 and cysteine rich domain 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4747 Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4747-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-4747-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4747-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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