miRTarBase - #MIRT496980


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pre-miRNA Information
pre-miRNA hsa-mir-4650-1   
Genomic Coordinates chr7: 67114322 - 67114397
Description Homo sapiens miR-4650-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4650-2   
Genomic Coordinates chr7: 72697903 - 72697978
Description Homo sapiens miR-4650-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4650-5p
Sequence 15| UCAGGCCUCUUUCUACCUU |33
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1332063492 8 dbSNP
rs914649075 9 dbSNP
rs1452034829 10 dbSNP
rs1489220537 15 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DNAJC27   
Synonyms RBJ, RabJS
Description DnaJ heat shock protein family (Hsp40) member C27
Transcript NM_016544   
Expression
Putative miRNA Targets on DNAJC27
3'UTR of DNAJC27
(miRNA target sites are highlighted)		 
>DNAJC27|NM_016544|3'UTR
   1 AAAGTACAGAAAAAAGCCACATGTGGGACTCAAATGCAAACAGACTTTCCCTAGAGGTGAAATAACCAACGTGGAGTTTT
  81 CCTTCCCAGAATCTCACTGCTCTTTTCATTCATGTGTTGTCATTTGTATATCAGTAATTCAGGTACCCATTTCATAGACA
 161 TTTTACTGAGAAATGACCTGCATTTGTATGAAGTGAACTGAGCGTCACACCCTGTACTTCATTTCATATTTCTAGATAAT
 241 TCTGAATTTTTTTCTCATTCGTCAGCTCTGTAATTATAGTATCACTTAGACATTTCACTTGGGGAAATCCACAAGGTTCC
 321 TGGAGGAGGGAAGAGAGGACAAGAGGACCCTTTCACTTTTTCTTTTTTACGGAATTCATCATCAGAGAAGAAAATAACAA
 401 AAATGGAAGCAAACAACATCAGAACCCCTGTAAGTTTGGTGTGACCTTACAGACAAGTTGCTGCTTTTACAATGAGTTCC
 481 TTAGGTGGTATTTTAACCCATCGATCTATAATGATGACTCTTGGCAGCCCTTTGGGAGTTTGTAAAATGAGGTGATACAG
 561 TTCTGAATTGAGCATTCCTTTATGATATTCACTCTGTTCCTCTTCTGCAGCCACCAGTGGGAGAGACAAGCCAGTCCTAA
 641 GAGAAAAGGTGGTGGCAGCCACAAATTCTAGGTACACTGGCTGCTGCCTATCCTGTCCCTGGATCTGAGGCCTTTCCCTT
 721 GCCATAGAAATGGTTGCTGGTAGCAGTAGAGAGCACTGTGCACCTGGGAATGAGGAATCAGGCCCCAAGACAGAAGTACT
 801 TGGAGGAGCCAGCTGCAGTAGTATCCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGGAGGATTGCTTAAGCCCAG
 881 GAGCTCAAGTCCCACCTGGGCAACATAGTAAGATCTTGTCTCTTAAAGAAAAAAAAAAAAGGTACTTAGAGGTCGCACTT
 961 AAAGATTATGCACATCAGCAGAGGAAAGGCCAGCCAAGCTTGGGGCAAGCTTGATGCAGTAGGAGAGACTCCTTATGAGG
1041 CTTAGCCCTTGTCTTACTGCCAGCCTTTGCCACAGGCAGGTGAGAAAGGCAGGGCCACTCCTCAGCAAAGTTGGCCTCTT
1121 CTACACTTCCTCACCAGTGTTGTTTCTTCCTTTTTTCCCCTCTTCCCCTTCCCGTCTTGTGTTTTTTCTGAACCCCACAT
1201 CTGCCATCATTTCTCTCCTCTAGAGTCCCTGGCTTCTGGCCACTGCCTCCTCCCTCTTCTAAGCCTTGGCCTGAATCTGG
1281 TTGATCAGAGGCAAGTGTGGATCCTTTGGGTGGCAGTCAGGGGAGATCTCAGGGCCTCTGTTGGGAGGAATCTCTGTAAT
1361 TCCTGCTTGGGCTCCAAATTTCTGAAGAGTAATATTTTTAAACTATAGCTTACAAAATACATTCTCTGACCACAGTCTCC
1441 TCCTTGATATACAAGGGATGGATGAAGTTCATGTATTAGGACTGGCACTCCTTACGGTGCTTATAGAACTAGTCTCACCA
1521 CTTGACTCATTACGTCGTCATTCTTGTTACATCACTCATACTTTTAGCTGCAACCACACTAATTCACATTTTTATATACT
1601 TTCAATTAGCTGTACTAATTGGGGCTTGAAAGTATATAAAATCTTCCTGTCCTGTGAATTTTAAAAAGCTATCCCATATC
1681 GATTGCCAAAGAGCATCTACCTTACCTCCTAAGAAGAAAAGCCACTTTCTTCCAATCCAAGCCCACTGCAGCCTTGTGGA
1761 TTTTCCACACAGCAGCTTTTCACTGTATGCCTGTACTTGGGCTGCACTGAGCTTGTCTTCAGGAAACCAGAGCGTTGCTT
1841 TATCATCGCACTTTTCATCTTGGTAATATCAAAACAACTTTTTAAATGAACTGATTGATATATGTTATTTCTTGCGAGGT
1921 TTTCCTCTGGCCTTTAACTGGCTTCTGAGGCTACAGAACTCCAACCCAGAGTTCTTCGGGACCTAAATTTTGCTTAAGGA
2001 AGGCCTTTATCATGCTGAAAGCACTCAGACATGTCTGTCCTCACAGCAGAATGTAGAAGTCATATGAATGAGGGATCGTG
2081 CACGGTAGCGTCAGCCCGAATTGACACGACAACTCTGAATGTGTGGCCCTCTATGAAAGCTGGTGCCAGTTTTCATCACT
2161 GTTATTAAATACTAGATTGGGAACCTCATTCAGCCGTATTGCACAGATGAGCAATTACAGCAGAGAAAATTCATTAGTGC
2241 TCCCACTCATATCCTTATGTGTGAGTTGGTGAAATTTAGCCTGAGCTTGATTCTTAGGTCTTGAGACTCAGTTTCCAACA
2321 CCTTCATTATTAATGTTAAGAATGGCCATATACCACTTCATTTACGTAAAAGGAATAAAATAAGCAAGTTAAGCTTCAGG
2401 GTCCTAGAATTTTTCTGATTTCTATAATCCTTCAGCAGAATATTAAGAAATAAAGCATGATCTGCAATGGAAAGGTTTTT
2481 TTGGCACTAACTTCATGCAGAATTTCACAGACATCTATGCATTAATTTAAATTCTTGGTGCAAATGTGTGCTTTGTAGTT
2561 CAACCTTATTAAAAATTCTTCAGCCAGTTAGGATTTCAAAATACATTAGTGAGAGTAACAGCTAGCAGAATAATTACAAT
2641 GGCTAAAACGTTTTTATAGAGAATCTTGTTTTTCAAAAAAGAATAAAAAGTTTGAATAGCTATTATTAAAGAAAAGCCAT
2721 GTCTTCAACATCTGAGTCACCAAGAAGTAACACTTTTTAAACTTGTTAGAAATCCCTGGAGGCATTTCAAATTCATCTTC
2801 TAACCTACCTAAGCACTTTAAAATACAGCCTCCTTCTGTTCCTCTGTTCCCCTTCATGCCTCCTTTTGAATTGATATCTC
2881 AGCTGTCAATATTTCTTTGACTTCAGCATTGTTATTTTATTTCTCTATATCAATGTGTCCTTAGTTTTCTTAGCCTGTTA
2961 ATTTAAAAATCCAGACTTGGGGGTCATTGTGTTGCTACCCAAGAGAAAATGCTACAGTTTTATAGATTGCACATCATTCT
3041 TTAAGGCATACTTTTACCTCAGGAAACTTACTCTAGTATGTTCTCATATATTGAATTCTCAACTAAGTAACTATTTCTTT
3121 ATACCTATAAACTAGTACCTAATTCACTGTTAGTTAAATGAGCTATAGATAAGGCAGCTAAATTTCTGAAAGATAGCCAG
3201 AGTAAGTAAGCAGCCACTGCAAGCTCTGAATCAGTTTTTTAAAAAAAAGAAAAAAAAAAAAAAGGAGCTGTGCCCCATTG
3281 AACAATGACAACATCACAAGGGGAAGGGAGGGATTTTGCCAAAAGTTAGAAAGGTGGAGCTGTAAGCCATGTGCTTGTTG
3361 CCTTTGACAGTGACAGTGCGCGTCTTACAACTAATTCCACTAGGCATGGGAATGTCACCTCCTTTGCCACTGTACCCCAT
3441 CAAGCTTACTCTGAATCAAAGGTTTTGTAAAACTTTTGAAAATGAACTTAGCTGCAAAATATAGCTAACCACTTTCCATT
3521 GCAAGCTTTGCAAAGTGAAGAGAGGTTCGTACTTCTCATAATTGGTATTTAGCACAATTGTAAGATACAGTTTTACTGTT
3601 TGTACATCGTTTTTTTCCATTAAACTTTTCTAGAGAAGACAAAAGCTTACACTGGTGACATGGATAAGTGAGATGGTGTC
3681 TAACGAGCAGTGCAATATTAGGCGGTGCAATAGAGGCCCTGTTGGCAAGATGAGTTTTGCTGGAGAGCTGGACAGTGTTG
3761 GTTAGCTTCCTGCATTGATTGCCCCTGGGCGTTCTTCCCCCTTAACTGTGAAAGCAGAGTCTATAAATGAACTCTTTGCT
3841 CTTACAAGGTAATTTACATATTTTCTTTCTGTTGAAATAACTGAAAATGTTAAATCTACCAGTTTATGTCTTGTAAACAG
3921 AGTGTCATATGTATTTAAGTTGTGTATTTTTATAAAGTAAAGCCAAGTATCAAACACCGGAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuCCAUCUU-UCUCC-GGACu 5'
            |||: || ||||| |||| 
Target 5' gcGGTGCAATAGAGGCCCTGt 3'
 3702 - 3722 133.00 -16.20
2 
miRNA  3' uuccaucUUUC-UCCGGAcu 5'
                 ||:| ||||||  
Target 5' tttgcttAAGGAAGGCCTtt 3'
 1989 - 2008 128.00 -9.60
3 
miRNA  3' uuccAUCU-UUCUCCGGAcu 5'
              |:||   |||||||  
Target 5' tcccTGGATCTGAGGCCTtt 3'
 696 - 715 127.00 -12.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31554241 9 COSMIC
COSN30593403 10 COSMIC
COSN20680312 40 COSMIC
COSN30507572 59 COSMIC
COSN31613666 70 COSMIC
COSN30508410 113 COSMIC
COSN30493089 124 COSMIC
COSN31501409 134 COSMIC
COSN30173950 170 COSMIC
COSN20096381 324 COSMIC
COSN17122461 928 COSMIC
COSN27255154 928 COSMIC
COSN27234108 929 COSMIC
COSN24625698 1177 COSMIC
COSN20874935 1220 COSMIC
COSN21985431 1451 COSMIC
COSN14939791 1608 COSMIC
COSN9368356 1680 COSMIC
COSN14915295 1848 COSMIC
COSN26314551 1905 COSMIC
COSN28201642 2161 COSMIC
COSN30163806 2540 COSMIC
COSN6176860 2572 COSMIC
COSN31570556 2665 COSMIC
COSN30176163 2680 COSMIC
COSN18887509 2878 COSMIC
COSN30164524 3003 COSMIC
COSN31596048 3049 COSMIC
COSN16234984 3249 COSMIC
COSN28948653 3249 COSMIC
COSN17076295 3409 COSMIC
COSN192801 3560 COSMIC
COSN7801639 3790 COSMIC
COSN31530274 3835 COSMIC
rs74654316 1173 GWAS
rs1172294 1285 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1446595837 7 dbSNP
rs748227013 10 dbSNP
rs745572390 17 dbSNP
rs1283144060 21 dbSNP
rs779336428 23 dbSNP
rs756869075 29 dbSNP
rs754187199 30 dbSNP
rs1377464285 35 dbSNP
rs764471180 36 dbSNP
rs1490182794 40 dbSNP
rs1480175078 44 dbSNP
rs756662962 45 dbSNP
rs1197196585 53 dbSNP
rs1273513124 65 dbSNP
rs923256969 66 dbSNP
rs1480654547 67 dbSNP
rs1158191105 69 dbSNP
rs1406115825 70 dbSNP
rs139413975 71 dbSNP
rs368109312 81 dbSNP
rs530308500 81 dbSNP
rs964938619 85 dbSNP
rs1215209064 94 dbSNP
rs1054709322 102 dbSNP
rs1016901003 106 dbSNP
rs78940100 113 dbSNP
rs749720100 116 dbSNP
rs1460316817 122 dbSNP
rs1348181233 128 dbSNP
rs780401413 128 dbSNP
rs1000888539 142 dbSNP
rs1286023130 143 dbSNP
rs903149010 147 dbSNP
rs549971233 154 dbSNP
rs1271028258 155 dbSNP
rs2241838 156 dbSNP
rs1451939584 160 dbSNP
rs1041743748 161 dbSNP
rs868306668 166 dbSNP
rs756413405 180 dbSNP
rs1287654050 182 dbSNP
rs993871158 204 dbSNP
rs1471250372 206 dbSNP
rs1159475254 209 dbSNP
rs950089084 209 dbSNP
rs1430591913 214 dbSNP
rs917352572 215 dbSNP
rs1366777218 229 dbSNP
rs1391173517 230 dbSNP
rs970396553 232 dbSNP
rs1024580095 233 dbSNP
rs1055917413 236 dbSNP
rs1011845183 242 dbSNP
rs1337915176 254 dbSNP
rs1443874658 260 dbSNP
rs147389961 261 dbSNP
rs1054077618 282 dbSNP
rs1243188899 292 dbSNP
rs563813072 298 dbSNP
rs767160179 302 dbSNP
rs1293848768 303 dbSNP
rs756759886 304 dbSNP
rs1328273284 314 dbSNP
rs902340168 319 dbSNP
rs35963059 324 dbSNP
rs397811021 325 dbSNP
rs1394414091 327 dbSNP
rs139553812 327 dbSNP
rs113149177 331 dbSNP
rs112421843 332 dbSNP
rs1227827648 333 dbSNP
rs1242819881 346 dbSNP
rs1442827129 369 dbSNP
rs751061192 370 dbSNP
rs541911934 371 dbSNP
rs1461870372 381 dbSNP
rs923288286 390 dbSNP
rs1420962101 415 dbSNP
rs1039068684 416 dbSNP
rs943332327 426 dbSNP
rs1253459254 432 dbSNP
rs909471002 436 dbSNP
rs1449814403 442 dbSNP
rs1316455625 444 dbSNP
rs1340551684 453 dbSNP
rs985446601 461 dbSNP
rs879151173 467 dbSNP
rs954405460 471 dbSNP
rs1172295 472 dbSNP
rs996366964 473 dbSNP
rs115219957 475 dbSNP
rs972481617 483 dbSNP
rs1309367517 484 dbSNP
rs1000413059 487 dbSNP
rs970470348 488 dbSNP
rs1191637184 497 dbSNP
rs1293439962 503 dbSNP
rs1024650657 504 dbSNP
rs1478349151 517 dbSNP
rs1041712244 518 dbSNP
rs1467839641 525 dbSNP
rs764188757 541 dbSNP
rs1402236696 550 dbSNP
rs959258795 552 dbSNP
rs895844724 560 dbSNP
rs1032299364 562 dbSNP
rs1306171309 567 dbSNP
rs1055886498 573 dbSNP
rs1282334727 577 dbSNP
rs1391892330 584 dbSNP
rs575941298 588 dbSNP
rs937458938 590 dbSNP
rs1225529472 598 dbSNP
rs1256862846 611 dbSNP
rs898966333 616 dbSNP
rs1203536299 622 dbSNP
rs1264459613 623 dbSNP
rs1462123058 627 dbSNP
rs1199331766 631 dbSNP
rs1355790798 636 dbSNP
rs541424134 653 dbSNP
rs764860951 653 dbSNP
rs1481638870 656 dbSNP
rs1167690910 659 dbSNP
rs1037943976 674 dbSNP
rs1177767501 678 dbSNP
rs1001181282 686 dbSNP
rs1452426921 690 dbSNP
rs1395580929 694 dbSNP
rs1286674447 695 dbSNP
rs148254267 698 dbSNP
rs1400463517 702 dbSNP
rs1302506797 704 dbSNP
rs1343388402 711 dbSNP
rs1220778833 713 dbSNP
rs1302238807 717 dbSNP
rs144023805 722 dbSNP
rs997325279 724 dbSNP
rs987370455 730 dbSNP
rs1354535740 745 dbSNP
rs1222339872 750 dbSNP
rs1267444964 755 dbSNP
rs544001356 756 dbSNP
rs1039099869 759 dbSNP
rs932983801 760 dbSNP
rs576511165 762 dbSNP
rs1381583916 768 dbSNP
rs943425269 770 dbSNP
rs1419830436 775 dbSNP
rs1162818182 799 dbSNP
rs1178000818 800 dbSNP
rs909200043 803 dbSNP
rs1249747340 812 dbSNP
rs1372346991 815 dbSNP
rs1049348870 817 dbSNP
rs929529884 826 dbSNP
rs773466442 827 dbSNP
rs919487671 829 dbSNP
rs981589850 831 dbSNP
rs1349283025 838 dbSNP
rs766105495 847 dbSNP
rs974483813 849 dbSNP
rs1283060244 863 dbSNP
rs555140340 867 dbSNP
rs917669058 870 dbSNP
rs1251045335 886 dbSNP
rs990973403 887 dbSNP
rs1175068709 892 dbSNP
rs1239663521 896 dbSNP
rs959102055 899 dbSNP
rs536004081 904 dbSNP
rs762983083 905 dbSNP
rs979351446 907 dbSNP
rs1308088246 913 dbSNP
rs1391678356 923 dbSNP
rs1375069450 924 dbSNP
rs1295987219 928 dbSNP
rs979395425 929 dbSNP
rs1020530707 930 dbSNP
rs1165431707 934 dbSNP
rs1353652872 936 dbSNP
rs1014555307 941 dbSNP
rs1378016065 941 dbSNP
rs1460321987 941 dbSNP
rs967045130 941 dbSNP
rs185983906 943 dbSNP
rs1312943965 945 dbSNP
rs1020851303 946 dbSNP
rs1432711190 954 dbSNP
rs997354714 955 dbSNP
rs901676991 961 dbSNP
rs1159547563 964 dbSNP
rs1421173967 967 dbSNP
rs1259573397 969 dbSNP
rs1248646646 979 dbSNP
rs1181608598 981 dbSNP
rs1202642261 988 dbSNP
rs1486051356 1001 dbSNP
rs181132932 1005 dbSNP
rs1182350496 1011 dbSNP
rs1259655094 1018 dbSNP
rs1418768245 1019 dbSNP
rs1017738754 1027 dbSNP
rs1008044693 1035 dbSNP
rs887808377 1036 dbSNP
rs1344912045 1045 dbSNP
rs899266825 1046 dbSNP
rs1241588889 1051 dbSNP
rs1360917496 1057 dbSNP
rs1448911557 1062 dbSNP
rs1288791174 1065 dbSNP
rs775506053 1071 dbSNP
rs867789304 1075 dbSNP
rs1323309628 1079 dbSNP
rs538220362 1082 dbSNP
rs562620312 1090 dbSNP
rs1276122414 1105 dbSNP
rs571224505 1110 dbSNP
rs1051622511 1111 dbSNP
rs1241435611 1122 dbSNP
rs1487236613 1125 dbSNP
rs1195762414 1131 dbSNP
rs1400997392 1132 dbSNP
rs1480001195 1134 dbSNP
rs1314117531 1146 dbSNP
rs1045921400 1149 dbSNP
rs1427607442 1156 dbSNP
rs1412918634 1165 dbSNP
rs74654316 1173 dbSNP
rs765143183 1174 dbSNP
rs990611200 1179 dbSNP
rs3731621 1180 dbSNP
rs1455129295 1181 dbSNP
rs1345245396 1188 dbSNP
rs937737383 1191 dbSNP
rs1361794755 1195 dbSNP
rs1403529580 1200 dbSNP
rs1158742922 1203 dbSNP
rs925031878 1206 dbSNP
rs1475618297 1210 dbSNP
rs1346761218 1215 dbSNP
rs974830875 1217 dbSNP
rs773022165 1218 dbSNP
rs1282864015 1221 dbSNP
rs2891410 1222 dbSNP
rs925011091 1234 dbSNP
rs977892073 1255 dbSNP
rs966329941 1259 dbSNP
rs1020924860 1261 dbSNP
rs1248255725 1280 dbSNP
rs1478439533 1281 dbSNP
rs1158241617 1282 dbSNP
rs1172294 1285 dbSNP
rs965899335 1295 dbSNP
rs960282828 1317 dbSNP
rs1485116448 1328 dbSNP
rs7424166 1329 dbSNP
rs1159743492 1333 dbSNP
rs1034332937 1335 dbSNP
rs1017837457 1339 dbSNP
rs773343537 1345 dbSNP
rs899185822 1376 dbSNP
rs1004955561 1377 dbSNP
rs772314525 1389 dbSNP
rs760651274 1398 dbSNP
rs886237578 1406 dbSNP
rs1241738122 1416 dbSNP
rs887872871 1419 dbSNP
rs1230891197 1421 dbSNP
rs1339850091 1424 dbSNP
rs1296230882 1426 dbSNP
rs1291706877 1429 dbSNP
rs1451986341 1435 dbSNP
rs1383807265 1437 dbSNP
rs553976869 1452 dbSNP
rs1181332472 1453 dbSNP
rs1382513030 1458 dbSNP
rs993906983 1460 dbSNP
rs1462228602 1462 dbSNP
rs1179406801 1471 dbSNP
rs1384706428 1486 dbSNP
rs1472059597 1495 dbSNP
rs189899146 1496 dbSNP
rs1045996766 1507 dbSNP
rs547777983 1512 dbSNP
rs894668755 1520 dbSNP
rs559866248 1525 dbSNP
rs1472522747 1528 dbSNP
rs936152863 1529 dbSNP
rs925029055 1531 dbSNP
rs748232471 1533 dbSNP
rs945060720 1534 dbSNP
rs541450788 1536 dbSNP
rs774484810 1537 dbSNP
rs532507287 1538 dbSNP
rs976020205 1542 dbSNP
rs565573527 1544 dbSNP
rs965970843 1546 dbSNP
rs1247858038 1549 dbSNP
rs993015821 1553 dbSNP
rs1214700082 1557 dbSNP
rs1242571403 1560 dbSNP
rs533865428 1579 dbSNP
rs543806077 1589 dbSNP
rs980417136 1595 dbSNP
rs963698893 1597 dbSNP
rs1168905576 1598 dbSNP
rs1426236247 1599 dbSNP
rs1466826574 1602 dbSNP
rs1169163401 1603 dbSNP
rs576664475 1603 dbSNP
rs1004882067 1611 dbSNP
rs1207644994 1612 dbSNP
rs775588601 1617 dbSNP
rs554899063 1626 dbSNP
rs1229532785 1628 dbSNP
rs1341049057 1632 dbSNP
rs1028193225 1634 dbSNP
rs993534391 1645 dbSNP
rs997290604 1648 dbSNP
rs1362942109 1651 dbSNP
rs1296652652 1652 dbSNP
rs1441343058 1653 dbSNP
rs543182878 1654 dbSNP
rs1000824382 1656 dbSNP
rs1039360430 1656 dbSNP
rs962047507 1670 dbSNP
rs574626700 1673 dbSNP
rs553417712 1679 dbSNP
rs538259009 1680 dbSNP
rs894742249 1681 dbSNP
rs1169709285 1682 dbSNP
rs945085537 1691 dbSNP
rs1170787121 1694 dbSNP
rs1402304524 1695 dbSNP
rs374131955 1701 dbSNP
rs770177658 1706 dbSNP
rs185831312 1711 dbSNP
rs556122241 1713 dbSNP
rs1400427453 1723 dbSNP
rs1056257909 1724 dbSNP
rs77331528 1729 dbSNP
rs927516376 1736 dbSNP
rs1043897067 1737 dbSNP
rs1350072207 1741 dbSNP
rs945091841 1742 dbSNP
rs1455871272 1743 dbSNP
rs1251475850 1750 dbSNP
rs1199216395 1753 dbSNP
rs1265719819 1760 dbSNP
rs1431030422 1769 dbSNP
rs1200592535 1771 dbSNP
rs1377653027 1772 dbSNP
rs1196309205 1800 dbSNP
rs909180568 1801 dbSNP
rs983429338 1802 dbSNP
rs1197004233 1804 dbSNP
rs1292674386 1806 dbSNP
rs1340034288 1828 dbSNP
rs1365265530 1832 dbSNP
rs1273861302 1833 dbSNP
rs538278435 1834 dbSNP
rs569152600 1845 dbSNP
rs1238142746 1847 dbSNP
rs548935292 1848 dbSNP
rs1354974860 1857 dbSNP
rs1040076167 1859 dbSNP
rs138145968 1862 dbSNP
rs1264009241 1864 dbSNP
rs1489686859 1866 dbSNP
rs964894196 1869 dbSNP
rs780759952 1872 dbSNP
rs1336572619 1875 dbSNP
rs1267663692 1879 dbSNP
rs1438536259 1887 dbSNP
rs1017446089 1888 dbSNP
rs910463937 1892 dbSNP
rs986062191 1901 dbSNP
rs1347880294 1904 dbSNP
rs1459284847 1908 dbSNP
rs566185467 1915 dbSNP
rs547862665 1916 dbSNP
rs1437047264 1918 dbSNP
rs1444854264 1919 dbSNP
rs1393670179 1921 dbSNP
rs1377788644 1924 dbSNP
rs1311274340 1932 dbSNP
rs1172343435 1936 dbSNP
rs1323850621 1936 dbSNP
rs370484041 1943 dbSNP
rs557903895 1943 dbSNP
rs1265650530 1945 dbSNP
rs1020605932 1952 dbSNP
rs1453426717 1954 dbSNP
rs1196376292 1958 dbSNP
rs201244420 1963 dbSNP
rs1457861636 1964 dbSNP
rs972144270 1965 dbSNP
rs1481807123 1972 dbSNP
rs1250345078 1978 dbSNP
rs962118152 1980 dbSNP
rs552278178 1996 dbSNP
rs145509182 2002 dbSNP
rs756924445 2004 dbSNP
rs1024313421 2005 dbSNP
rs1401098907 2006 dbSNP
rs17046751 2008 dbSNP
rs543784508 2012 dbSNP
rs1229409960 2013 dbSNP
rs1044585837 2016 dbSNP
rs777431285 2023 dbSNP
rs1216387373 2026 dbSNP
rs757928266 2027 dbSNP
rs1307561285 2030 dbSNP
rs1035051277 2031 dbSNP
rs1000441176 2032 dbSNP
rs904715706 2033 dbSNP
rs1235253881 2038 dbSNP
rs1484154663 2046 dbSNP
rs1041927077 2047 dbSNP
rs1182406368 2048 dbSNP
rs1262145962 2066 dbSNP
rs566737157 2077 dbSNP
rs892229690 2078 dbSNP
rs1413964172 2079 dbSNP
rs765233140 2083 dbSNP
rs73920628 2084 dbSNP
rs1255660596 2087 dbSNP
rs546745563 2088 dbSNP
rs11886240 2089 dbSNP
rs767698230 2090 dbSNP
rs1279684907 2092 dbSNP
rs1159945097 2093 dbSNP
rs964828916 2097 dbSNP
rs1050800508 2098 dbSNP
rs552500362 2098 dbSNP
rs542829557 2100 dbSNP
rs1319729199 2101 dbSNP
rs1188043895 2106 dbSNP
rs75112641 2107 dbSNP
rs971882704 2108 dbSNP
rs1242502216 2109 dbSNP
rs1477784619 2111 dbSNP
rs1189728038 2115 dbSNP
rs1427326413 2116 dbSNP
rs1415147848 2120 dbSNP
rs1158569521 2125 dbSNP
rs1359249581 2130 dbSNP
rs150441011 2130 dbSNP
rs1299109082 2131 dbSNP
rs1447395296 2133 dbSNP
rs1009519116 2135 dbSNP
rs1272770999 2139 dbSNP
rs1369064165 2155 dbSNP
rs774500023 2165 dbSNP
rs1285998623 2166 dbSNP
rs1351343651 2170 dbSNP
rs1034686042 2178 dbSNP
rs1284650005 2190 dbSNP
rs376382857 2195 dbSNP
rs373186522 2196 dbSNP
rs555923064 2203 dbSNP
rs77112774 2204 dbSNP
rs1454753244 2206 dbSNP
rs1178035440 2211 dbSNP
rs1378551082 2218 dbSNP
rs1038555689 2220 dbSNP
rs1159806169 2232 dbSNP
rs573876535 2233 dbSNP
rs555593490 2243 dbSNP
rs1432030000 2253 dbSNP
rs1047959734 2263 dbSNP
rs1441203225 2272 dbSNP
rs969011292 2273 dbSNP
rs923236200 2276 dbSNP
rs1318942362 2278 dbSNP
rs762981861 2280 dbSNP
rs749737032 2292 dbSNP
rs1280105159 2298 dbSNP
rs1020514553 2303 dbSNP
rs1387413367 2318 dbSNP
rs1165073100 2326 dbSNP
rs976129162 2333 dbSNP
rs533977630 2343 dbSNP
rs943420851 2346 dbSNP
rs1291779263 2347 dbSNP
rs1469020933 2365 dbSNP
rs566717855 2366 dbSNP
rs1459181513 2386 dbSNP
rs140485746 2387 dbSNP
rs1475665786 2388 dbSNP
rs1472009049 2389 dbSNP
rs151308563 2392 dbSNP
rs571691391 2399 dbSNP
rs1461606382 2401 dbSNP
rs1330296014 2406 dbSNP
rs888803193 2424 dbSNP
rs1050114650 2428 dbSNP
rs531366311 2429 dbSNP
rs1464656399 2440 dbSNP
rs899087653 2446 dbSNP
rs559446692 2454 dbSNP
rs1445733741 2456 dbSNP
rs1285691982 2459 dbSNP
rs1335259912 2460 dbSNP
rs549928113 2466 dbSNP
rs1034655008 2471 dbSNP
rs1256441409 2478 dbSNP
rs1320091445 2494 dbSNP
rs1036196285 2495 dbSNP
rs1255577116 2505 dbSNP
rs1274069549 2508 dbSNP
rs534679408 2510 dbSNP
rs969483640 2514 dbSNP
rs531695648 2517 dbSNP
rs1016681143 2521 dbSNP
rs142411584 2527 dbSNP
rs1167920473 2531 dbSNP
rs1400909788 2534 dbSNP
rs180899285 2545 dbSNP
rs992898648 2546 dbSNP
rs937462172 2548 dbSNP
rs527976989 2549 dbSNP
rs1172293 2565 dbSNP
rs190222039 2578 dbSNP
rs1434794225 2580 dbSNP
rs978795520 2599 dbSNP
rs969085993 2608 dbSNP
rs1372119273 2641 dbSNP
rs902118255 2644 dbSNP
rs577693841 2649 dbSNP
rs1342994081 2650 dbSNP
rs943369385 2651 dbSNP
rs1281719984 2656 dbSNP
rs376951036 2657 dbSNP
rs1191877404 2658 dbSNP
rs543882813 2659 dbSNP
rs1429880271 2665 dbSNP
rs1193483495 2676 dbSNP
rs1376551634 2681 dbSNP
rs1464138646 2683 dbSNP
rs1175432051 2689 dbSNP
rs946794004 2690 dbSNP
rs1419035752 2694 dbSNP
rs1296044794 2702 dbSNP
rs1386908242 2706 dbSNP
rs1410526948 2718 dbSNP
rs1019773011 2720 dbSNP
rs1300910472 2721 dbSNP
rs987993088 2724 dbSNP
rs1007443321 2730 dbSNP
rs771138840 2736 dbSNP
rs1186545267 2748 dbSNP
rs1353528683 2764 dbSNP
rs746692285 2766 dbSNP
rs960554616 2776 dbSNP
rs927853132 2785 dbSNP
rs888884509 2790 dbSNP
rs981131979 2812 dbSNP
rs769278564 2819 dbSNP
rs1205320506 2825 dbSNP
rs1253327882 2838 dbSNP
rs969078691 2838 dbSNP
rs185644756 2841 dbSNP
rs1194897117 2853 dbSNP
rs1395164914 2853 dbSNP
rs1438963867 2854 dbSNP
rs78554489 2861 dbSNP
rs1365305043 2882 dbSNP
rs1017013509 2887 dbSNP
rs1487620595 2889 dbSNP
rs1005267271 2904 dbSNP
rs1293157637 2904 dbSNP
rs1443380238 2916 dbSNP
rs951147083 2921 dbSNP
rs1376277143 2923 dbSNP
rs573530701 2927 dbSNP
rs1246270886 2930 dbSNP
rs756691083 2932 dbSNP
rs555396160 2934 dbSNP
rs1445114343 2935 dbSNP
rs1317891170 2936 dbSNP
rs1244589648 2939 dbSNP
rs994514015 2946 dbSNP
rs1264068171 2949 dbSNP
rs1487263820 2950 dbSNP
rs1215212005 2952 dbSNP
rs1026416543 2954 dbSNP
rs545931812 2969 dbSNP
rs1309832616 2971 dbSNP
rs1410162240 2980 dbSNP
rs1036266682 2985 dbSNP
rs573158826 3009 dbSNP
rs902046424 3013 dbSNP
rs940594822 3014 dbSNP
rs1273131367 3022 dbSNP
rs1366526233 3035 dbSNP
rs895714494 3036 dbSNP
rs777524640 3046 dbSNP
rs1399599525 3058 dbSNP
rs781745626 3060 dbSNP
rs889090847 3064 dbSNP
rs558010972 3073 dbSNP
rs1349343898 3075 dbSNP
rs927405181 3083 dbSNP
rs1043534781 3086 dbSNP
rs1337433287 3088 dbSNP
rs1234728413 3090 dbSNP
rs1388206204 3092 dbSNP
rs1316746518 3102 dbSNP
rs947445453 3117 dbSNP
rs913221092 3124 dbSNP
rs1480894035 3125 dbSNP
rs989084613 3127 dbSNP
rs1253788025 3132 dbSNP
rs866199311 3135 dbSNP
rs1423251708 3137 dbSNP
rs965635436 3143 dbSNP
rs142491128 3145 dbSNP
rs147748312 3146 dbSNP
rs969717884 3148 dbSNP
rs1301658307 3149 dbSNP
rs1357729769 3152 dbSNP
rs1415858335 3158 dbSNP
rs1428969216 3159 dbSNP
rs1293516328 3192 dbSNP
rs1339384284 3194 dbSNP
rs1212472351 3198 dbSNP
rs1395519507 3201 dbSNP
rs1274434831 3204 dbSNP
rs1307618149 3206 dbSNP
rs550209303 3216 dbSNP
rs1177963484 3218 dbSNP
rs1278191015 3226 dbSNP
rs1431702721 3233 dbSNP
rs954314645 3234 dbSNP
rs1424700417 3239 dbSNP
rs983769590 3240 dbSNP
rs951074180 3241 dbSNP
rs145654874 3243 dbSNP
rs1420288563 3248 dbSNP
rs1174576597 3249 dbSNP
rs373733107 3249 dbSNP
rs1205093269 3250 dbSNP
rs1486275282 3252 dbSNP
rs976503352 3252 dbSNP
rs1435902488 3263 dbSNP
rs1359049472 3264 dbSNP
rs527583605 3264 dbSNP
rs567099232 3264 dbSNP
rs1282993018 3267 dbSNP
rs994983918 3273 dbSNP
rs192683025 3275 dbSNP
rs1014562899 3277 dbSNP
rs1300207542 3288 dbSNP
rs1004476004 3291 dbSNP
rs1007783912 3294 dbSNP
rs895747428 3303 dbSNP
rs1057400707 3313 dbSNP
rs1001416261 3318 dbSNP
rs1375962686 3333 dbSNP
rs905686017 3334 dbSNP
rs1043174955 3337 dbSNP
rs1488192871 3340 dbSNP
rs947433267 3346 dbSNP
rs913294497 3350 dbSNP
rs1022571443 3353 dbSNP
rs1376813589 3354 dbSNP
rs1160106146 3355 dbSNP
rs1455046346 3357 dbSNP
rs1158620970 3368 dbSNP
rs1010899623 3374 dbSNP
rs1402875453 3375 dbSNP
rs1053119912 3379 dbSNP
rs548956689 3380 dbSNP
rs189014318 3381 dbSNP
rs139507282 3382 dbSNP
rs1323264530 3388 dbSNP
rs986113326 3393 dbSNP
rs1372570717 3397 dbSNP
rs1258842516 3401 dbSNP
rs1199207334 3406 dbSNP
rs954269629 3412 dbSNP
rs906332584 3428 dbSNP
rs1225314287 3430 dbSNP
rs1045314036 3438 dbSNP
rs754937286 3439 dbSNP
rs184601460 3445 dbSNP
rs1212076209 3449 dbSNP
rs947972211 3452 dbSNP
rs1209030502 3462 dbSNP
rs909770941 3469 dbSNP
rs1178561891 3478 dbSNP
rs1285962549 3488 dbSNP
rs963112244 3492 dbSNP
rs1471449563 3495 dbSNP
rs984029931 3497 dbSNP
rs540381625 3501 dbSNP
rs1014593908 3502 dbSNP
rs1314805940 3518 dbSNP
rs1004510544 3524 dbSNP
rs1395993542 3526 dbSNP
rs1441091519 3531 dbSNP
rs1394146914 3540 dbSNP
rs1401246134 3541 dbSNP
rs533538495 3545 dbSNP
rs747886916 3545 dbSNP
rs1333854904 3548 dbSNP
rs1289213700 3549 dbSNP
rs959698638 3557 dbSNP
rs1355437438 3558 dbSNP
rs1035648076 3562 dbSNP
rs1275353166 3567 dbSNP
rs575961236 3580 dbSNP
rs753650156 3588 dbSNP
rs1462050293 3596 dbSNP
rs1270977458 3599 dbSNP
rs1370201657 3601 dbSNP
rs1183193901 3602 dbSNP
rs1186069015 3607 dbSNP
rs1237243511 3608 dbSNP
rs1001846142 3609 dbSNP
rs1423730896 3610 dbSNP
rs1262951455 3623 dbSNP
rs535943143 3628 dbSNP
rs1461654580 3629 dbSNP
rs1166742045 3638 dbSNP
rs1393737537 3640 dbSNP
rs1411567934 3645 dbSNP
rs976429887 3650 dbSNP
rs1339648176 3660 dbSNP
rs1412762136 3665 dbSNP
rs1294916366 3668 dbSNP
rs1356259942 3669 dbSNP
rs1218284116 3673 dbSNP
rs965517130 3684 dbSNP
rs766209784 3685 dbSNP
rs1190877842 3687 dbSNP
rs1341621900 3690 dbSNP
rs1466016711 3703 dbSNP
rs147346699 3704 dbSNP
rs1278621420 3705 dbSNP
rs111759308 3710 dbSNP
rs528969365 3711 dbSNP
rs139523732 3715 dbSNP
rs1022547261 3718 dbSNP
rs1266631253 3729 dbSNP
rs764271989 3739 dbSNP
rs1370807175 3751 dbSNP
rs1476144199 3754 dbSNP
rs1168409825 3763 dbSNP
rs1339800112 3767 dbSNP
rs1296074254 3768 dbSNP
rs1011203704 3769 dbSNP
rs892432874 3770 dbSNP
rs1375858877 3774 dbSNP
rs1399608876 3785 dbSNP
rs1436978425 3787 dbSNP
rs34922018 3790 dbSNP
rs763071831 3791 dbSNP
rs1328272089 3820 dbSNP
rs1228322089 3823 dbSNP
rs891112684 3832 dbSNP
rs1274353634 3836 dbSNP
rs191683185 3838 dbSNP
rs1362704635 3840 dbSNP
rs1050035094 3841 dbSNP
rs775537102 3845 dbSNP
rs1281437875 3851 dbSNP
rs758708433 3855 dbSNP
rs1488189245 3858 dbSNP
rs1204178717 3861 dbSNP
rs932915950 3866 dbSNP
rs920162057 3875 dbSNP
rs1462111603 3906 dbSNP
rs1448381320 3921 dbSNP
rs906627679 3923 dbSNP
rs1393044975 3944 dbSNP
rs1455933991 3954 dbSNP
rs1175493531 3958 dbSNP
rs1452876645 3969 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BAC
Disease MIMAT0019713
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020023. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuccaucuuucuCCGGACu 5'
                      |||||| 
Target 5' ----------uuGGCCUGa 3'
 		1 - 9
Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_016544 | 3UTR | CUGGCUUCUGGCCACUGCCUCCUCCCUCUUCUAAGCCUUGGCCUGAAUCUGGUUGAUCAGAGGCAAGUGUGGAUCCUUUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_016544 | 3UTR | GGCUUCUGGCCACUGCCUCCUCCCUCUUCUAAGCCUUGGCCUGAAUCUGGUUGAUCAGAGGCAAGUGUGGAUCCUUUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1020023
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BAC / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000264711.2 | 3UTR | UUGGCCUGAAUCUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
62 hsa-miR-4650-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT064263 KIAA1804 mitogen-activated protein kinase kinase kinase 21 2 2
MIRT082508 CALM3 calmodulin 3 2 10
MIRT456061 SLC25A28 solute carrier family 25 member 28 2 2
MIRT463521 ZBTB7B zinc finger and BTB domain containing 7B 2 2
MIRT465449 TP53 tumor protein p53 2 2
MIRT469517 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470967 PKM pyruvate kinase, muscle 2 2
MIRT471902 NUAK2 NUAK family kinase 2 2 2
MIRT479924 CBX5 chromobox 5 2 2
MIRT483045 C15orf52 chromosome 15 open reading frame 52 2 13
MIRT493184 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT496615 IKZF2 IKAROS family zinc finger 2 2 2
MIRT496980 DNAJC27 DnaJ heat shock protein family (Hsp40) member C27 2 2
MIRT522489 MFSD9 major facilitator superfamily domain containing 9 2 2
MIRT527859 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT528540 TTC22 tetratricopeptide repeat domain 22 2 2
MIRT528860 PKP1 plakophilin 1 2 2
MIRT529389 NSFL1C NSFL1 cofactor 2 2
MIRT533523 TRIM13 tripartite motif containing 13 2 2
MIRT538056 DNAH3 dynein axonemal heavy chain 3 2 2
MIRT541480 ARF3 ADP ribosylation factor 3 2 6
MIRT576737 Wars tryptophanyl-tRNA synthetase 2 2
MIRT610462 SYNPO2L synaptopodin 2 like 2 4
MIRT614189 GGT7 gamma-glutamyltransferase 7 2 2
MIRT626341 PCSK7 proprotein convertase subtilisin/kexin type 7 2 2
MIRT627547 SNIP1 Smad nuclear interacting protein 1 2 2
MIRT628605 TMEM251 transmembrane protein 251 2 2
MIRT630827 YTHDC1 YTH domain containing 1 2 4
MIRT633419 TMEM120B transmembrane protein 120B 2 2
MIRT635354 CSMD2 CUB and Sushi multiple domains 2 2 2
MIRT636418 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT637031 SPTLC3 serine palmitoyltransferase long chain base subunit 3 2 2
MIRT638032 TMEM109 transmembrane protein 109 2 2
MIRT642847 ZBTB7C zinc finger and BTB domain containing 7C 2 2
MIRT644389 CD59 CD59 molecule (CD59 blood group) 2 2
MIRT645167 NOL9 nucleolar protein 9 2 2
MIRT645601 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT649169 IQSEC1 IQ motif and Sec7 domain 1 2 2
MIRT659166 DCTN5 dynactin subunit 5 2 4
MIRT660814 AHCY adenosylhomocysteinase 2 2
MIRT663640 HM13 histocompatibility minor 13 2 2
MIRT663848 TRIM72 tripartite motif containing 72 2 2
MIRT666535 RNF157 ring finger protein 157 2 2
MIRT667885 IP6K1 inositol hexakisphosphate kinase 1 2 2
MIRT671613 C6orf25 megakaryocyte and platelet inhibitory receptor G6b 2 2
MIRT673800 MALL mal, T-cell differentiation protein like 2 2
MIRT676281 ZNF260 zinc finger protein 260 2 2
MIRT687008 RPL35 ribosomal protein L35 2 2
MIRT689090 ACVR1 activin A receptor type 1 2 2
MIRT689259 WDR83OS WD repeat domain 83 opposite strand 2 2
MIRT697458 ZC3H4 zinc finger CCCH-type containing 4 2 2
MIRT699223 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT710222 JMJD4 jumonji domain containing 4 2 2
MIRT710935 ING5 inhibitor of growth family member 5 2 2
MIRT715830 ZNF598 zinc finger protein 598 2 2
MIRT716134 THOC5 THO complex 5 2 2
MIRT717518 HRNR hornerin 2 2
MIRT717918 LRRC15 leucine rich repeat containing 15 2 2
MIRT718307 XPOT exportin for tRNA 2 2
MIRT721350 LIF LIF, interleukin 6 family cytokine 2 2
MIRT724503 MSMO1 methylsterol monooxygenase 1 2 2
MIRT724993 FSTL3 follistatin like 3 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4650 Gemcitabine 60750 NSC613327 approved resistant Low Pancreatic Cancer cell line (SW1990)
hsa-miR-4650 Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (SW1990)
hsa-miR-4650-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (SW1990)
hsa-miR-4650-5p Tripterygium wilfordii Hook F resistant tissue

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