miRTarBase - #MIRT497641


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pre-miRNA Information
pre-miRNA hsa-mir-103b-1   
Genomic Coordinates chr5: 168560904 - 168560965
Description Homo sapiens miR-103b-1 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-103b-2   
Genomic Coordinates chr20: 3917502 - 3917563
Description Homo sapiens miR-103b-2 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-103b
Sequence 1| UCAUAGCCCUGUACAAUGCUGCU |23
Evidence Experimental
Experiments ChIP-seq
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN28198041 16 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369221403 4 dbSNP
rs1283132774 7 dbSNP
rs1222085747 10 dbSNP
rs572980521 14 dbSNP
rs748411363 15 dbSNP
rs769854452 23 dbSNP
Putative Targets

Gene Information
Gene Symbol GLDN   
Synonyms CLOM, COLM, CRG-L2, CRGL2, LCCS11, UNC-112
Description gliomedin
Transcript NM_181789   
Expression
Putative miRNA Targets on GLDN
3'UTR of GLDN
(miRNA target sites are highlighted)		 
>GLDN|NM_181789|3'UTR
   1 TGTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTTTTTT
  81 AACGTCAGCCAGATATTTAGAAAATAACCTCAAAAGTGTTTATATGGTCAGTGAGCCCCGCTTAGTGAAATAGCAACAGA
 161 TTGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTCCTTGGGCCTTAGT
 241 TTCCCCATTGGTAATCTGAATTGGCTAAGATGATTGGGGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGG
 321 CTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTTTTTTAGCCACATGCTGACCAAATTTACCTTTGAG
 401 TTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATATCTTGTTCTTTGAAAAAATGCATTGACTCTT
 481 TAAGACATCTAAAGTATCACATTATCCATAATTTATTGCTTTTCTTTGCATCTGCACCTGCCACCACAGAATAACCATTA
 561 CCCTCAGCTGCTGATTGGGCAGCTCTGAGATTAGCAAAAGCCAGGGACAGCTACATGTTCAGGTTTTTTTTTTTTTTTTT
 641 TTTTCAATAAGCTATTTTTTTTCTTTTCTTATTTTAAATAGAGAGAGAGTCTTGCTATGTTTCCCAGGCTGGTCTTGAAC
 721 TCCTGGGGCTCAAGTGATCCTCCTGCCTTGGCCTCCCAAAATGCTGGATTACAGGCATGTGTGCCTGGCCCAGGTTTCTT
 801 AATAAAACAGAATCATGATCTTCCAGGTTCCCCCCAGTTTCTGATCATGTTGATTTGTAGCTGTGGATCATGAACACTGA
 881 ATCCTCAGATCACTCTGACTTCTTATGCTTCTCCTGTGGATCCACTATCAAAGTACTAAATGCTGTGTAAGTAGACGTTA
 961 ATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCTCCATTTGTGGCTATTATGTAGAACTGGGCCA
1041 GAGCCAGTCCATTGCCTGTTTTTTTAAATAAGGTTTTACTGAGCACAGCCACACTCATTTGTTTATGCAGTACGGCCTGA
1121 CATTGCTTTTGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGTGCCTAAAATATTGACC
1201 AGCTACCCCTTTATGGAAAAAGATTGCTGACTCCTGATAAAGAATATAAAGTGAGCCTGATTCTTGAAAAAATCAGAACC
1281 AGAGCCTGTTTTGTTTTGTTCTAAACTAAGAAGCCGCATAGGATGTGACTTGCGTTTTGAGTAGAGGGGAAGGCTGATAA
1361 CGGCGTAAGATGAAGTGGCCCTCCACAAAGGCTGGTTAGGGGACAGTTCTTTCTCTAACATAGTTTTAAAGGATGTGATC
1441 TGGTCCCCTTGGATGCCAGGAGAGAATCCAGTTGAACTTGCTCCTAAATGCTCTTAAATATGCATATTTTCTGCCAACTC
1521 ACTTCTTTAAACATCTTTCAGCCCAGCGCTGCGGCCCCGGGAAGGGCCACTGCGAATAGAGAGGAAGCTGGAAAAGTTCC
1601 TGGGGCTCTGCAGCCAGGAAGGGGAACCAGGGCAAATCTTATGTAAAGATTTTTCAGCAACTTGTCCCAATTTGTGTGTA
1681 TTCTGAAACTTTCTCTTTGGGACCAAATTCATTCTCAATGGCCCTGAGTTCAATATATTATTAACAGCAGTATTTTAAAA
1761 CTTAGGGTTGAACTGGGCATGGTGGCACATAACTGCAATCCCAGCTACTTTGGAGGCAGGGATGGGAGGATCACTTGAGG
1841 CCAGGATCTCAGGACCAGCCTAGAGAGATCCCATCTCTAAAAAATAAAATATAAGAAAATAAAACTTAGGGGATATACAG
1921 ATTTAAATATTCAAATCTCCCTGCTCCCCTGAAAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTGTGTTCTCAATATG
2001 ATGGCTATTTGAAACTTCACCTACTTTTCATTAGATTGGTTGTACCATGTCACCTTAGCTTTTAAAAATACTCTTTTCAG
2081 ATTCACGTTCTCTAACAAAGAGTCTCATGTTCAAGATCAATATGTCTAATAAGTGCTGGTGTCCTTTTAAAGTATTTAAA
2161 TATATATGTTGCTGTTGCTGAATACAGGAGACCAGGTTAGGAATATAGTTTCATAATAATAGTACATACAATACTAATTG
2241 TATATAAGGTAGCAACCAAAAGAGGTTGTTAATTAGCACATATTCCTTTTAGAAAAATGTTTCAGAAACCTCAGTCTTGA
2321 TATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACCACTGGAGAAGCTTACACCGGGACTTTTTT
2401 TCTTTTTTCTTTTTTTTTTGCTATGACAGAGTAATGCTAACGTAAGGACAACTGAGTTTGATCAGTGTTTAATCGCAGTG
2481 GGTAATCTTATCTGATTGTCTTTAAAAGTGAAAAGGATTAAGATTTTATTCTTTCTTGTAAACATTACTTGATTTTTTAA
2561 AGAAGTTTTGGGCTCACTGCTAAAATAGAGTATACAACTGAATGTTTTTAAGTCAAGATACTGTTTTAGGAGTTTACCCT
2641 CTCATTTATAACCAAAGTTGCTCTAAAACACTTTCCAAATATCTGCACTTCTGATGTCAGAATCAAACCAGATAATTCTC
2721 TAATTCTTCTTTAATCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCC
2801 ACACTCTATTTCAAGGCATTTTCTTTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGTAT
2881 CGTTAAGCACAGGTGCTATGACAGAAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAA
2961 CAGTCACAAGGTGAAAAGTCAAATGAAACAGTACAATTCTTGATGAGTGAGGTGTCATCTTCCAACCACACAGAGGACGT
3041 TTTGGCTATGATCATCTGATGGCAAGTGAAGGAGAAATGAGTGATAGGGCTTTGCGTTTTCATCCAGATGCTGTGGCCCT
3121 GTGTTTCACAGCATTAAGAGCCATAATTTCCAACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTT
3201 GGTTGTAATTTAACAAGTCAAATAAAATAATCATTGCTGAGCACAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucGUC----GUAACAUGUCCCGAUACu 5'
            |||    |:|| |    ||||||| 
Target 5' caCAGAGGACGTTTT----GGCTATGa 3'
 3029 - 3051 145.00 -14.64
2 
miRNA  3' ucgUCGUAACA-----UGUCC-CGAUACu 5'
             ||:|| ||     ||||| |||||| 
Target 5' ccaAGTATCGTTAAGCACAGGTGCTATGa 3'
 2873 - 2901 140.00 -20.20
3 
miRNA  3' ucgUCGUAA--CA-UGUCCCGAUACu 5'
             || | |  || |:|||||| || 
Target 5' aggAGAAATGAGTGATAGGGCTTTGc 3'
 3070 - 3095 130.00 -14.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN22891242 8 COSMIC
COSN26977464 13 COSMIC
COSN30183406 17 COSMIC
COSN31520860 43 COSMIC
COSN30626547 59 COSMIC
COSN30174601 67 COSMIC
COSN30456716 67 COSMIC
COSN30474093 80 COSMIC
COSN26977467 81 COSMIC
COSN13626926 84 COSMIC
COSN508439 85 COSMIC
COSN31532556 110 COSMIC
COSN31533989 114 COSMIC
COSN7047757 119 COSMIC
COSN5865458 128 COSMIC
COSN30106205 226 COSMIC
COSN8174445 358 COSMIC
COSN24747792 470 COSMIC
COSN8389458 545 COSMIC
COSN6275214 564 COSMIC
COSN18772672 645 COSMIC
COSN28090998 645 COSMIC
COSN6275215 772 COSMIC
COSN6642000 827 COSMIC
COSN17535088 1113 COSMIC
COSN29208240 1350 COSMIC
COSN20112060 1536 COSMIC
COSN29259030 1536 COSMIC
COSN7047758 1990 COSMIC
COSN27879195 2172 COSMIC
COSN23243429 2197 COSMIC
COSN14957675 2348 COSMIC
COSN24911767 2393 COSMIC
COSN16741357 2488 COSMIC
COSN14908732 2754 COSMIC
COSN29085331 3160 COSMIC
COSN15160874 3186 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1200699834 3 dbSNP
rs1476049465 5 dbSNP
rs772141288 6 dbSNP
rs1440308280 11 dbSNP
rs775233035 13 dbSNP
rs529357071 14 dbSNP
rs1477464626 16 dbSNP
rs1482091067 18 dbSNP
rs1191336190 20 dbSNP
rs769756281 21 dbSNP
rs1204485116 26 dbSNP
rs756601978 34 dbSNP
rs551101379 35 dbSNP
rs1171745453 37 dbSNP
rs1020001549 38 dbSNP
rs775267783 39 dbSNP
rs1313911415 45 dbSNP
rs1401845614 46 dbSNP
rs967549958 48 dbSNP
rs1445312407 51 dbSNP
rs569026402 55 dbSNP
rs1377264378 56 dbSNP
rs1006536559 57 dbSNP
rs1435901993 58 dbSNP
rs1017957048 64 dbSNP
rs1318438645 67 dbSNP
rs1364452488 70 dbSNP
rs1368792325 72 dbSNP
rs1432817581 73 dbSNP
rs138167670 84 dbSNP
rs142511663 85 dbSNP
rs1218398026 88 dbSNP
rs918745060 94 dbSNP
rs1245719802 100 dbSNP
rs566637251 104 dbSNP
rs1207331431 108 dbSNP
rs1489772084 117 dbSNP
rs953082565 125 dbSNP
rs1244502115 126 dbSNP
rs190933926 128 dbSNP
rs1210739720 132 dbSNP
rs951610554 135 dbSNP
rs555060014 136 dbSNP
rs7168449 137 dbSNP
rs7168450 138 dbSNP
rs1036952134 140 dbSNP
rs1292923160 141 dbSNP
rs1456193150 145 dbSNP
rs1168814039 152 dbSNP
rs1248927402 153 dbSNP
rs919327364 155 dbSNP
rs930727018 160 dbSNP
rs1049059514 182 dbSNP
rs1194960165 188 dbSNP
rs1190956782 191 dbSNP
rs1422696552 196 dbSNP
rs1458485808 203 dbSNP
rs905188999 204 dbSNP
rs947460569 205 dbSNP
rs1209812412 207 dbSNP
rs1487698862 215 dbSNP
rs368685811 235 dbSNP
rs1206094585 240 dbSNP
rs1341734491 242 dbSNP
rs1055705125 249 dbSNP
rs575402757 262 dbSNP
rs1331817977 266 dbSNP
rs895733625 267 dbSNP
rs1455150054 271 dbSNP
rs1327890293 278 dbSNP
rs999396313 279 dbSNP
rs1331585613 283 dbSNP
rs760359885 290 dbSNP
rs1050951774 296 dbSNP
rs1435568514 304 dbSNP
rs1428631908 319 dbSNP
rs1368304441 321 dbSNP
rs544264932 322 dbSNP
rs545974023 326 dbSNP
rs1014063674 336 dbSNP
rs891062120 348 dbSNP
rs1020537809 350 dbSNP
rs1198722316 353 dbSNP
rs902897137 358 dbSNP
rs1375166612 359 dbSNP
rs1000344850 364 dbSNP
rs1183375773 364 dbSNP
rs1032762349 365 dbSNP
rs1230473644 366 dbSNP
rs183132996 368 dbSNP
rs1017905109 374 dbSNP
rs749598232 377 dbSNP
rs985793811 379 dbSNP
rs1019120230 383 dbSNP
rs1206872570 387 dbSNP
rs1230922544 390 dbSNP
rs966697028 401 dbSNP
rs995654798 403 dbSNP
rs1408986947 411 dbSNP
rs1025419353 412 dbSNP
rs78300334 415 dbSNP
rs962226024 421 dbSNP
rs1396275475 423 dbSNP
rs972233128 425 dbSNP
rs763700298 427 dbSNP
rs528775874 431 dbSNP
rs930853492 438 dbSNP
rs540960089 440 dbSNP
rs951611230 445 dbSNP
rs754618253 449 dbSNP
rs1468649622 451 dbSNP
rs1414813361 462 dbSNP
rs1160633853 469 dbSNP
rs1245349595 471 dbSNP
rs1250122616 473 dbSNP
rs981650053 480 dbSNP
rs561892245 492 dbSNP
rs1473743992 493 dbSNP
rs926731040 494 dbSNP
rs937962377 495 dbSNP
rs1410728555 497 dbSNP
rs1471351634 503 dbSNP
rs1227762359 516 dbSNP
rs1056483054 520 dbSNP
rs1164479108 523 dbSNP
rs1391442571 524 dbSNP
rs1404697513 536 dbSNP
rs1212195884 537 dbSNP
rs1331861509 544 dbSNP
rs895711929 545 dbSNP
rs1321440286 546 dbSNP
rs991448982 551 dbSNP
rs778578128 552 dbSNP
rs1436635609 556 dbSNP
rs1388779479 557 dbSNP
rs1321779986 558 dbSNP
rs1372198857 569 dbSNP
rs914573903 581 dbSNP
rs1406186295 596 dbSNP
rs16964347 602 dbSNP
rs1041665661 605 dbSNP
rs1182021668 616 dbSNP
rs924744142 617 dbSNP
rs981687285 618 dbSNP
rs1207989759 619 dbSNP
rs1463495886 623 dbSNP
rs1230220250 624 dbSNP
rs1296266909 624 dbSNP
rs1365221917 624 dbSNP
rs1491566388 624 dbSNP
rs566908869 624 dbSNP
rs5812554 624 dbSNP
rs761424896 624 dbSNP
rs763933641 624 dbSNP
rs902997632 624 dbSNP
rs1226715940 625 dbSNP
rs1000025062 626 dbSNP
rs1357061958 627 dbSNP
rs74013211 628 dbSNP
rs562986111 629 dbSNP
rs1161853367 630 dbSNP
rs1451597370 630 dbSNP
rs891009997 631 dbSNP
rs942626660 631 dbSNP
rs1206284469 632 dbSNP
rs1248384283 633 dbSNP
rs1222261376 634 dbSNP
rs1450794901 636 dbSNP
rs1039627527 644 dbSNP
rs1250687936 644 dbSNP
rs1273208659 645 dbSNP
rs1342436666 645 dbSNP
rs1481864946 646 dbSNP
rs1189108273 647 dbSNP
rs1368551464 648 dbSNP
rs1472148011 652 dbSNP
rs1161420442 653 dbSNP
rs1277098336 654 dbSNP
rs1437836738 655 dbSNP
rs928905059 655 dbSNP
rs1301684912 657 dbSNP
rs377697973 664 dbSNP
rs371322577 669 dbSNP
rs1474361852 672 dbSNP
rs1370262756 677 dbSNP
rs533499676 679 dbSNP
rs1025791103 680 dbSNP
rs1477673569 680 dbSNP
rs995205668 680 dbSNP
rs1266422145 685 dbSNP
rs1336339462 686 dbSNP
rs1341166179 688 dbSNP
rs1032714851 691 dbSNP
rs185561404 698 dbSNP
rs1483293277 699 dbSNP
rs1313616079 708 dbSNP
rs1250609715 721 dbSNP
rs1202063759 724 dbSNP
rs1007139715 729 dbSNP
rs1313390758 730 dbSNP
rs1278751306 736 dbSNP
rs1018581862 739 dbSNP
rs1229690589 744 dbSNP
rs1281998914 745 dbSNP
rs1412063958 746 dbSNP
rs966289582 747 dbSNP
rs190719219 751 dbSNP
rs1026589085 754 dbSNP
rs952307329 756 dbSNP
rs753354580 763 dbSNP
rs1360922457 771 dbSNP
rs984967381 778 dbSNP
rs1035861870 785 dbSNP
rs926657236 786 dbSNP
rs991732661 787 dbSNP
rs879259849 790 dbSNP
rs1441381910 791 dbSNP
rs992132331 803 dbSNP
rs1021907683 811 dbSNP
rs756678086 813 dbSNP
rs969105698 821 dbSNP
rs1459645449 827 dbSNP
rs1450003946 834 dbSNP
rs977469380 837 dbSNP
rs1230820663 839 dbSNP
rs533806485 840 dbSNP
rs1306771654 858 dbSNP
rs1222209007 859 dbSNP
rs933430126 862 dbSNP
rs986559332 873 dbSNP
rs778417389 875 dbSNP
rs1447383155 876 dbSNP
rs1174567006 880 dbSNP
rs912395595 886 dbSNP
rs1457733825 888 dbSNP
rs1403154410 894 dbSNP
rs1410869526 896 dbSNP
rs182860916 908 dbSNP
rs1156682428 911 dbSNP
rs945420835 920 dbSNP
rs1042023366 925 dbSNP
rs924585418 942 dbSNP
rs1436480603 946 dbSNP
rs898428686 948 dbSNP
rs935801157 952 dbSNP
rs1211086394 953 dbSNP
rs371692647 957 dbSNP
rs1260449829 958 dbSNP
rs1054218800 975 dbSNP
rs888840157 979 dbSNP
rs1214076948 980 dbSNP
rs1007275384 990 dbSNP
rs1002620335 995 dbSNP
rs1245583256 996 dbSNP
rs1256281000 998 dbSNP
rs1040151619 1000 dbSNP
rs1299922940 1003 dbSNP
rs752005374 1004 dbSNP
rs755479228 1005 dbSNP
rs1384144418 1007 dbSNP
rs1287110442 1012 dbSNP
rs16964348 1013 dbSNP
rs867018733 1021 dbSNP
rs867691797 1024 dbSNP
rs1422400395 1027 dbSNP
rs1391410629 1037 dbSNP
rs1198299575 1038 dbSNP
rs1269485355 1043 dbSNP
rs748572895 1048 dbSNP
rs1185328771 1056 dbSNP
rs770037516 1057 dbSNP
rs1246074342 1059 dbSNP
rs1266436868 1059 dbSNP
rs1357570910 1059 dbSNP
rs1277105319 1060 dbSNP
rs1229223595 1066 dbSNP
rs567125930 1074 dbSNP
rs868715955 1082 dbSNP
rs866009153 1084 dbSNP
rs1325967770 1087 dbSNP
rs1293320732 1088 dbSNP
rs1026951493 1090 dbSNP
rs1388466463 1091 dbSNP
rs952278737 1094 dbSNP
rs1367996597 1095 dbSNP
rs1199285954 1096 dbSNP
rs1006371708 1097 dbSNP
rs796951215 1100 dbSNP
rs999230623 1102 dbSNP
rs1465733512 1107 dbSNP
rs1174470022 1109 dbSNP
rs777898305 1111 dbSNP
rs187930347 1114 dbSNP
rs1435430331 1124 dbSNP
rs59800137 1127 dbSNP
rs1268423035 1135 dbSNP
rs1199131816 1137 dbSNP
rs1489980733 1140 dbSNP
rs1320516212 1141 dbSNP
rs1254204994 1142 dbSNP
rs954750831 1146 dbSNP
rs1360468052 1148 dbSNP
rs1312718018 1150 dbSNP
rs369385593 1150 dbSNP
rs543456211 1151 dbSNP
rs967105620 1154 dbSNP
rs764629240 1155 dbSNP
rs770871146 1156 dbSNP
rs1308241014 1163 dbSNP
rs1221319594 1169 dbSNP
rs1393607428 1171 dbSNP
rs978125595 1174 dbSNP
rs578050268 1183 dbSNP
rs935937247 1184 dbSNP
rs1466154621 1185 dbSNP
rs1054187486 1186 dbSNP
rs146002400 1188 dbSNP
rs1207519593 1199 dbSNP
rs1176384061 1203 dbSNP
rs1479646818 1205 dbSNP
rs910371370 1206 dbSNP
rs1489420378 1210 dbSNP
rs1210285041 1216 dbSNP
rs35681301 1217 dbSNP
rs943226956 1218 dbSNP
rs1202239038 1236 dbSNP
rs1040521583 1248 dbSNP
rs577299590 1252 dbSNP
rs774589773 1257 dbSNP
rs993533131 1259 dbSNP
rs148628619 1268 dbSNP
rs1288784941 1276 dbSNP
rs1414420089 1286 dbSNP
rs1472985416 1287 dbSNP
rs1158509504 1293 dbSNP
rs1237809186 1297 dbSNP
rs1333606898 1297 dbSNP
rs888002306 1300 dbSNP
rs1006466810 1304 dbSNP
rs1344019462 1307 dbSNP
rs142103887 1315 dbSNP
rs1336589338 1316 dbSNP
rs938351248 1317 dbSNP
rs1391203391 1325 dbSNP
rs772204969 1332 dbSNP
rs775399868 1334 dbSNP
rs1013787904 1335 dbSNP
rs1025445967 1337 dbSNP
rs1242635574 1341 dbSNP
rs1201647019 1345 dbSNP
rs1350715553 1346 dbSNP
rs1466208820 1349 dbSNP
rs1227316667 1354 dbSNP
rs193140639 1360 dbSNP
rs540521090 1362 dbSNP
rs1043231788 1363 dbSNP
rs1245093641 1365 dbSNP
rs978473360 1366 dbSNP
rs150754568 1367 dbSNP
rs999107242 1368 dbSNP
rs763977552 1371 dbSNP
rs1367965019 1378 dbSNP
rs1032376624 1382 dbSNP
rs574046812 1393 dbSNP
rs544601767 1396 dbSNP
rs990006103 1398 dbSNP
rs1489808948 1400 dbSNP
rs139028305 1407 dbSNP
rs943195861 1408 dbSNP
rs975945714 1416 dbSNP
rs753378713 1422 dbSNP
rs1181649791 1448 dbSNP
rs761539463 1453 dbSNP
rs975619531 1460 dbSNP
rs184037777 1469 dbSNP
rs929086033 1472 dbSNP
rs1291800900 1479 dbSNP
rs952693107 1482 dbSNP
rs1358297188 1489 dbSNP
rs982701598 1496 dbSNP
rs908487761 1508 dbSNP
rs1365348421 1523 dbSNP
rs1047965785 1525 dbSNP
rs1430673065 1528 dbSNP
rs551915061 1531 dbSNP
rs1491072268 1533 dbSNP
rs3078041 1534 dbSNP
rs5812555 1534 dbSNP
rs750911454 1534 dbSNP
rs941716982 1536 dbSNP
rs560045035 1537 dbSNP
rs1431680368 1542 dbSNP
rs948457589 1548 dbSNP
rs776297116 1549 dbSNP
rs149890842 1553 dbSNP
rs548973946 1554 dbSNP
rs567538679 1559 dbSNP
rs1014132525 1560 dbSNP
rs1206915623 1562 dbSNP
rs934856139 1565 dbSNP
rs1053347267 1566 dbSNP
rs764660342 1568 dbSNP
rs1025159330 1573 dbSNP
rs1277184958 1574 dbSNP
rs898135 1575 dbSNP
rs527479068 1580 dbSNP
rs755462870 1592 dbSNP
rs1275101138 1597 dbSNP
rs570947626 1600 dbSNP
rs900546016 1606 dbSNP
rs1355118572 1611 dbSNP
rs958027238 1628 dbSNP
rs781701833 1629 dbSNP
rs1177122578 1632 dbSNP
rs1479976859 1635 dbSNP
rs985458361 1643 dbSNP
rs1183847372 1644 dbSNP
rs1480757531 1662 dbSNP
rs952563745 1667 dbSNP
rs1201818509 1675 dbSNP
rs549325880 1681 dbSNP
rs1460776238 1691 dbSNP
rs1484300815 1696 dbSNP
rs1015496156 1711 dbSNP
rs549531531 1713 dbSNP
rs1323221126 1717 dbSNP
rs1281772928 1719 dbSNP
rs147945116 1720 dbSNP
rs1279263677 1731 dbSNP
rs976293337 1736 dbSNP
rs1361019269 1738 dbSNP
rs1337260360 1739 dbSNP
rs1469258317 1745 dbSNP
rs553833255 1747 dbSNP
rs923117308 1763 dbSNP
rs1161120476 1764 dbSNP
rs1243138294 1767 dbSNP
rs1443331897 1770 dbSNP
rs1201721533 1778 dbSNP
rs929155680 1783 dbSNP
rs550358122 1785 dbSNP
rs1391190971 1791 dbSNP
rs1243252454 1800 dbSNP
rs978514075 1809 dbSNP
rs1461272916 1811 dbSNP
rs1261873528 1819 dbSNP
rs1218375064 1821 dbSNP
rs1167926914 1831 dbSNP
rs141871477 1836 dbSNP
rs1283805321 1847 dbSNP
rs1222305945 1857 dbSNP
rs934824291 1884 dbSNP
rs1466152373 1892 dbSNP
rs762047242 1912 dbSNP
rs1301753153 1913 dbSNP
rs898134 1917 dbSNP
rs1322513180 1918 dbSNP
rs1454099966 1927 dbSNP
rs750470992 1940 dbSNP
rs944953585 1941 dbSNP
rs1406740588 1942 dbSNP
rs1385246817 1944 dbSNP
rs771286843 1945 dbSNP
rs1442311769 1947 dbSNP
rs1054798071 1958 dbSNP
rs1188853303 1960 dbSNP
rs187689853 1965 dbSNP
rs1241931464 1968 dbSNP
rs2470194 1972 dbSNP
rs544962172 1977 dbSNP
rs1211004004 1986 dbSNP
rs562369603 1989 dbSNP
rs562831537 1990 dbSNP
rs145520206 2000 dbSNP
rs113383081 2003 dbSNP
rs1297571729 2008 dbSNP
rs1032378678 2021 dbSNP
rs893897549 2022 dbSNP
rs1006824028 2027 dbSNP
rs1249152812 2035 dbSNP
rs1475319075 2046 dbSNP
rs868089111 2046 dbSNP
rs1286910287 2048 dbSNP
rs1438411528 2049 dbSNP
rs1365803141 2064 dbSNP
rs1185124090 2072 dbSNP
rs1015443779 2073 dbSNP
rs1018245991 2076 dbSNP
rs1426908903 2084 dbSNP
rs74013213 2088 dbSNP
rs976009287 2091 dbSNP
rs1030704421 2093 dbSNP
rs1261402363 2095 dbSNP
rs1185130328 2097 dbSNP
rs992738951 2097 dbSNP
rs192671199 2101 dbSNP
rs542789103 2105 dbSNP
rs950573516 2110 dbSNP
rs1403298115 2113 dbSNP
rs375450082 2118 dbSNP
rs1222051032 2121 dbSNP
rs143280463 2125 dbSNP
rs978855563 2138 dbSNP
rs766744354 2145 dbSNP
rs1227988784 2164 dbSNP
rs550326296 2166 dbSNP
rs925688393 2169 dbSNP
rs934415351 2183 dbSNP
rs151284278 2186 dbSNP
rs1345970583 2187 dbSNP
rs912059738 2194 dbSNP
rs1397931812 2243 dbSNP
rs990456188 2249 dbSNP
rs1039247931 2259 dbSNP
rs570861648 2260 dbSNP
rs1367970507 2265 dbSNP
rs930637311 2266 dbSNP
rs1049532907 2273 dbSNP
rs886490101 2280 dbSNP
rs1481595138 2283 dbSNP
rs1430465318 2289 dbSNP
rs531999211 2299 dbSNP
rs1479586297 2300 dbSNP
rs140443069 2310 dbSNP
rs1321554892 2316 dbSNP
rs1210642589 2322 dbSNP
rs1196447230 2330 dbSNP
rs1480370657 2334 dbSNP
rs1056598958 2345 dbSNP
rs565751894 2347 dbSNP
rs895631502 2358 dbSNP
rs1282406430 2362 dbSNP
rs924219851 2364 dbSNP
rs1446920945 2369 dbSNP
rs1337150423 2377 dbSNP
rs1014123245 2378 dbSNP
rs1390283158 2385 dbSNP
rs1022867063 2389 dbSNP
rs935476496 2390 dbSNP
rs970384786 2391 dbSNP
rs1478535243 2394 dbSNP
rs1198282482 2395 dbSNP
rs1477280466 2395 dbSNP
rs1173213574 2396 dbSNP
rs1426734613 2396 dbSNP
rs1473315056 2401 dbSNP
rs28709225 2403 dbSNP
rs145639721 2405 dbSNP
rs28510344 2409 dbSNP
rs201889954 2410 dbSNP
rs28457769 2410 dbSNP
rs1461724886 2411 dbSNP
rs1262494218 2412 dbSNP
rs1398894017 2413 dbSNP
rs1352625549 2420 dbSNP
rs1325385846 2421 dbSNP
rs1260925792 2422 dbSNP
rs138088986 2424 dbSNP
rs1316552700 2425 dbSNP
rs1452804027 2428 dbSNP
rs1384174018 2432 dbSNP
rs1006917330 2442 dbSNP
rs1387623043 2443 dbSNP
rs1413097591 2443 dbSNP
rs1159328450 2455 dbSNP
rs1453332241 2460 dbSNP
rs1378498782 2462 dbSNP
rs1302824925 2472 dbSNP
rs567869558 2475 dbSNP
rs1424826360 2476 dbSNP
rs746984946 2477 dbSNP
rs538355120 2480 dbSNP
rs998628878 2497 dbSNP
rs556920270 2500 dbSNP
rs1448475763 2501 dbSNP
rs1262172162 2507 dbSNP
rs1204125109 2511 dbSNP
rs1348084062 2519 dbSNP
rs922167986 2529 dbSNP
rs776489513 2545 dbSNP
rs1349976791 2546 dbSNP
rs1293572264 2551 dbSNP
rs930898321 2553 dbSNP
rs950696217 2555 dbSNP
rs1004694971 2556 dbSNP
rs1292601514 2561 dbSNP
rs1358163851 2570 dbSNP
rs1452591873 2573 dbSNP
rs1328501782 2576 dbSNP
rs1446506346 2576 dbSNP
rs184051942 2578 dbSNP
rs1319411606 2594 dbSNP
rs1222187910 2603 dbSNP
rs1266405094 2604 dbSNP
rs1016117922 2606 dbSNP
rs1483830582 2607 dbSNP
rs1382076755 2609 dbSNP
rs1049352246 2613 dbSNP
rs1165751160 2622 dbSNP
rs963235419 2623 dbSNP
rs1362730892 2630 dbSNP
rs1384712842 2653 dbSNP
rs940693262 2658 dbSNP
rs1476358408 2663 dbSNP
rs78235613 2666 dbSNP
rs77457887 2668 dbSNP
rs990549509 2669 dbSNP
rs761366077 2675 dbSNP
rs1164971527 2676 dbSNP
rs1222795026 2694 dbSNP
rs764926039 2702 dbSNP
rs1288968616 2705 dbSNP
rs1227050781 2717 dbSNP
rs896593057 2719 dbSNP
rs1014059502 2726 dbSNP
rs970410176 2727 dbSNP
rs1044630241 2728 dbSNP
rs547081906 2733 dbSNP
rs982190601 2736 dbSNP
rs1161436689 2738 dbSNP
rs1405816095 2739 dbSNP
rs905732479 2744 dbSNP
rs373136670 2747 dbSNP
rs1411794095 2749 dbSNP
rs1411917669 2751 dbSNP
rs1167309492 2754 dbSNP
rs935600336 2761 dbSNP
rs1476688474 2768 dbSNP
rs34907383 2773 dbSNP
rs772688921 2776 dbSNP
rs1199612482 2787 dbSNP
rs1479915263 2793 dbSNP
rs1244684451 2794 dbSNP
rs1053996336 2800 dbSNP
rs1437947794 2806 dbSNP
rs762491627 2807 dbSNP
rs1198596649 2816 dbSNP
rs942913406 2817 dbSNP
rs1009871140 2818 dbSNP
rs572501795 2829 dbSNP
rs1345112318 2840 dbSNP
rs965770192 2863 dbSNP
rs974847331 2872 dbSNP
rs1355204398 2874 dbSNP
rs901262389 2877 dbSNP
rs542791955 2879 dbSNP
rs765905379 2882 dbSNP
rs1176871784 2883 dbSNP
rs377435408 2889 dbSNP
rs1422586744 2896 dbSNP
rs886329465 2897 dbSNP
rs1004789992 2900 dbSNP
rs952283504 2903 dbSNP
rs985427106 2910 dbSNP
rs1016211813 2914 dbSNP
rs1178496624 2917 dbSNP
rs1245789324 2921 dbSNP
rs963204720 2922 dbSNP
rs1312023668 2934 dbSNP
rs940641452 2934 dbSNP
rs1290052791 2935 dbSNP
rs992164854 2938 dbSNP
rs1205464106 2941 dbSNP
rs1225712223 2948 dbSNP
rs753096471 2949 dbSNP
rs948113011 2955 dbSNP
rs1045193402 2962 dbSNP
rs1384906092 2971 dbSNP
rs1435621626 2982 dbSNP
rs756662307 2986 dbSNP
rs531404164 2988 dbSNP
rs567290569 3000 dbSNP
rs543282859 3001 dbSNP
rs1357237155 3006 dbSNP
rs1160793015 3013 dbSNP
rs564849808 3015 dbSNP
rs144746917 3018 dbSNP
rs1156299293 3025 dbSNP
rs1031073627 3027 dbSNP
rs891733226 3028 dbSNP
rs1245486972 3034 dbSNP
rs956398902 3036 dbSNP
rs1009818484 3039 dbSNP
rs1391810277 3040 dbSNP
rs1430124992 3050 dbSNP
rs1168758671 3056 dbSNP
rs1018573445 3057 dbSNP
rs1408339660 3060 dbSNP
rs547347530 3061 dbSNP
rs1317733571 3072 dbSNP
rs915528277 3073 dbSNP
rs995878030 3075 dbSNP
rs1238021445 3080 dbSNP
rs565585602 3082 dbSNP
rs1361749302 3084 dbSNP
rs1313504040 3090 dbSNP
rs1315591704 3094 dbSNP
rs1028763891 3096 dbSNP
rs188444558 3097 dbSNP
rs975989362 3110 dbSNP
rs1431286371 3118 dbSNP
rs952297230 3119 dbSNP
rs984988058 3130 dbSNP
rs1425953048 3134 dbSNP
rs1385348123 3138 dbSNP
rs1015554651 3139 dbSNP
rs922687301 3146 dbSNP
rs962299582 3156 dbSNP
rs992446650 3166 dbSNP
rs934081955 3174 dbSNP
rs1335295085 3178 dbSNP
rs1262717345 3179 dbSNP
rs1250465635 3180 dbSNP
rs547983954 3186 dbSNP
rs754174952 3187 dbSNP
rs1292600313 3189 dbSNP
rs1278725802 3194 dbSNP
rs1243902680 3199 dbSNP
rs1460448006 3201 dbSNP
rs1181713200 3203 dbSNP
rs948059758 3205 dbSNP
rs1297684705 3237 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL35
Disease MIMAT0007402
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020022. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucgucguaaCAUGUCC-CGAuacu 5'
                   | ||||| |||    
Target 5' -----uuaaGCACAGGUGCU---- 3'
 		1 - 15
Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_181789 | 3UTR | UGCUAUGACAGAAAAAGUUCUGGGGUGGAAGUUUUAAGAUGAGGAGUUCUGAUCUUAGGCAUCUUAACAGUCACAAGGUGAAAAGUCAAAUGAAACAGUACAAUUCUUGAUGAGUGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1020022
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL35 / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000335449.6 | 3UTR | UUAAGCACAGGUGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla -0.627 1.1e-2 -0.599 1.5e-2 13 Click to see details
GSE28544 Breast cancer 0.448 1.4e-2 0.020 4.6e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
53 hsa-miR-103b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT218386 E2F3 E2F transcription factor 3 2 2
MIRT404221 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT441502 SPG20 spartin 2 6
MIRT444124 ZNRF3 zinc and ring finger 3 2 2
MIRT454236 OSBPL10 oxysterol binding protein like 10 2 4
MIRT457919 ZNF212 zinc finger protein 212 2 2
MIRT462254 LAMA4 laminin subunit alpha 4 2 2
MIRT463176 ZNF281 zinc finger protein 281 2 2
MIRT472355 TSPAN1 tetraspanin 1 2 2
MIRT474133 LIN54 lin-54 DREAM MuvB core complex component 2 4
MIRT494946 IFFO2 intermediate filament family orphan 2 2 2
MIRT497403 NPY4R neuropeptide Y receptor Y4 2 2
MIRT497641 GLDN gliomedin 2 2
MIRT505340 TMEM245 transmembrane protein 245 2 6
MIRT505680 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT510706 SREK1IP1 SREK1 interacting protein 1 2 6
MIRT512198 C1orf43 chromosome 1 open reading frame 43 2 2
MIRT522089 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT525074 FRK fyn related Src family tyrosine kinase 2 2
MIRT531276 PPIL3 peptidylprolyl isomerase like 3 2 2
MIRT535119 PLXNA2 plexin A2 2 2
MIRT540836 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541018 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT545752 CA12 carbonic anhydrase 12 2 4
MIRT546404 SRP9 signal recognition particle 9 2 2
MIRT547991 HCFC2 host cell factor C2 2 4
MIRT554502 SAE1 SUMO1 activating enzyme subunit 1 2 2
MIRT558360 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT558863 CD2AP CD2 associated protein 2 2
MIRT559939 ZNF567 zinc finger protein 567 2 2
MIRT566300 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT567490 FOXK1 forkhead box K1 2 2
MIRT617139 ZNF556 zinc finger protein 556 2 2
MIRT625400 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 2 2
MIRT626491 CEP89 centrosomal protein 89 2 2
MIRT629487 GSN gelsolin 2 4
MIRT638456 PLXDC2 plexin domain containing 2 2 2
MIRT648498 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT654845 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT664587 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT664977 TDRD1 tudor domain containing 1 2 2
MIRT665028 ELK1 ELK1, ETS transcription factor 2 2
MIRT666043 STON2 stonin 2 2 2
MIRT668863 CRY2 cryptochrome circadian clock 2 2 2
MIRT669297 C17orf85 nuclear cap binding subunit 3 2 2
MIRT680975 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682267 RS1 retinoschisin 1 2 2
MIRT685283 KIAA1143 KIAA1143 2 2
MIRT693375 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT701785 MSL1 male specific lethal 1 homolog 2 2
MIRT709373 SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 2 2
MIRT715154 IL12B interleukin 12B 2 2
MIRT734499 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-1 Anthocyanin NULL 145858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Caffeic acid NULL 689043 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Ferulic acid NULL 445858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Hesperidin NULL 10621 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-1 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Quantitative real-time PCR myocardial differentiation of mouse ES cells 19521018 2009 down-regulated
miR-1 Sulfonyl-hydrazone-1 (SHZ) NULL NULL Quantitative real-time PCR Murine broblast-derived Induced pluripotent stem cells 21445862 2011 up-regulated
miR-1 Cocaine NULL 446220 Next-generation sequencing ventral striatum 21708909 2011 up-regulated
miR-1 Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 down-regualted
miR-1 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-1 Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 Palmitic acid approved 985 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-1 Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-1 Hydrogen peroxide (H2O2) NULL 784 Quantitative real-time PCR Human umbilical vein endothelial cells 21527937 2011 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-1 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-1 Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR cardia 22889704 2012 up-regulated
miR-1 Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-1 Quinidine approved 441074 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 up-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 down-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR post-infarction rat cardiomyocytes 21220930 2011 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-1 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-103b Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (BGC823)
hsa-miR-103b Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-103b Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-103b Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-103b Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-103b Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-103b Cisplatin 5460033 NSC119875 approved resistant cell line (BGC-823)

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