pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GGA3   
Synonyms -
Description golgi associated, gamma adaptin ear containing, ARF binding protein 3
Transcript NM_001172703   
Other Transcripts NM_001172704 , NM_014001 , NM_138619   
Expression
Putative miRNA Targets on GGA3
3'UTR of GGA3
(miRNA target sites are highlighted)
>GGA3|NM_001172703|3'UTR
   1 CCCCAGAGGACGCTGTGATCTCCACCTTGAAGCCAGGCAGGCTGCCCTGAGACGAGGAGGGCTCTGGTCCCGTCACTCTC
  81 CATGCCCTGACAACAGTGCTTGTAGCTTTGATGTGGAACAGGGGCCCTGGGCATTTCTGCTGAGAACCAAACTGCTGCTG
 161 TGATAACCTCTCCTTTGGCCCCTAAAAGGACCTGTTTTTATCTACCTGTGTGACTTGAAGTGGCCATATGCTGTCAGGGG
 241 TGCGGAGTGGCCCCTGACTTCACTGCTGTCCCGGGAACATGGACCCCCAGGCTTGGCGTAGGTGTTTGCTTCCTTCTACT
 321 GGCATTCACTGAAGCCACTGGGGTGGGGGGTGGGGGGTGGGAGTCTCTAAAGAGAGACTGTCATGGGTCATTCCCCACAA
 401 GAGCCACATCCTCACACCTGACAGATGCACGGCCCAAGGGGCTGCAGCCCTGTTGCAATTCCATGCTTCCCCCGCCAACC
 481 AGCTCCTGCTGCCATCCCCAGGGAGGTGGCCCAGGAAGGTGCCTGGCCCAGAATAAGGAACTGGCATACTGCAAAGTCCC
 561 CAGCCCTGCCTCTGGTGGACAGCATCGTCCTGGAATGGCCACGGAGTGATGAGTTGTGTGCTTGTCCCTGGCAGTGGCAG
 641 GCTGTGTCCTATGGACATCTTGGCAGGACATGGAATTTGGCCTCATGACAGGCCCAACTAGGGATAGGAAGGAAAATGAA
 721 GAGAGCCAGTATTTCCCCTTCTCCAGAAGCAGGTACTCAGCTTTCTGGGAAAAGCGTGCCTCCAGCCGTGGGGACAGGCC
 801 ATCCTACTGACTACCTCTTGCTTGGCATGAAATAAACTGCTATCCTCCCCTTGGAATCTACCGCCACTCTACATCCTACT
 881 GCTTTGGCCTCCCTCTCCTCTCACCAGATGGCATGTGGTGTGGCACCTGTGGCTGGACACAGGAGGCCTCAGGATCACAA
 961 ATGTTACACTAGACATATGTCCTAATGTGCTGCCCAGAAACCTCAACTGTTCCCCAGCTACTGAGGGGCACTGTCAGCGA
1041 GATGTTGGGTCTGGAGGTGATGAGATCGGGCCACACTTGAGCTGAGTCACCAGACCCTATTGCTTCAACAGTGCTTGGCC
1121 CCCGCCAGCTTGTCCCAGCCACTCTAGCTGCTGGATGTGATCCTGGGACATGTACTCCAAGCCTCCGTCACAAAAAAAAA
1201 ATCACCAGCTGCCATAGACACGGGGGAAGCTTGCGGAGCCCAGGTGAACAAGCTCAGCAATCGGACATCTCTGGGGAAAG
1281 GAAGGTGGCACAGACCATGTTCCCTGGTTCCTCCCTGCCCCTTGCCAGGCTTCCTTATTCCTTACTATGGGAAGAGGTCA
1361 TATCCCTTCCCTGCCCCTCGCTGTCTTTAGCAAGCAGGTTTCACTGCTTCATTAGAAGAGGACAAGTCAAAAGTGAATCA
1441 TTTTTCACTACTTAAGGAATAAATCCAAGAGCTTTCCAGAGACTGGCTGCTGCAGCCCTGGGAATGTCTGTGGAATTACT
1521 ATGTGGAAATGGAACTTTGTGTTATGCTCTAGACATTACAGTTATTTGAGTGTTACTCGTTACTGTTGAGGTCAGTGCTT
1601 CGTGGCAAATGGCTGTACTGGATATCCCAGCTCTGCTGCCCTTGTTTTGCTGCATGTTAAATAAAACCATTTTCACTGTA
1681 CTTGGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuGAUAUGUUGGAGGAUGGAGu 5'
            | || | ||:  ||||||| 
Target 5' ggCCATCCTACTGACTACCTCt 3'
797 - 818 156.00 -13.60
2
miRNA  3' uugauauGUUGGAGGAUGGAGu 5'
                 ||:|  |||:|||| 
Target 5' aagtcccCAGC--CCTGCCTCt 3'
554 - 573 135.00 -14.30
3
miRNA  3' uugaUAUGUUGGAGGAU-GGAGu 5'
              | |:|| || ||| |||| 
Target 5' catgAAATAAACTGCTATCCTCc 3'
826 - 848 130.00 -10.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30457217 3 COSMIC
COSN31480968 17 COSMIC
COSN31554340 37 COSMIC
COSN30175983 53 COSMIC
COSN30506988 86 COSMIC
COSN26555448 180 COSMIC
COSN31595018 207 COSMIC
COSN24314522 217 COSMIC
COSN31522490 260 COSMIC
COSN1201221 338 COSMIC
COSN20114419 348 COSMIC
COSN6660710 348 COSMIC
COSN24297103 364 COSMIC
COSN24297098 365 COSMIC
COSN23250408 405 COSMIC
COSN31551006 700 COSMIC
COSN31490168 741 COSMIC
COSN15618845 766 COSMIC
COSN30689444 774 COSMIC
COSN15627999 775 COSMIC
COSN15644025 806 COSMIC
COSN31522496 888 COSMIC
COSN15139682 1048 COSMIC
COSN28946116 1192 COSMIC
COSN25714846 1333 COSMIC
COSN31540354 1456 COSMIC
COSN9673898 1456 COSMIC
COSN17075768 1512 COSMIC
COSN1728916 1632 COSMIC
COSN31540578 1638 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs764374595 5 dbSNP
rs1162476898 9 dbSNP
rs753894955 11 dbSNP
rs375369157 12 dbSNP
rs1178437518 13 dbSNP
rs376819047 15 dbSNP
rs751469722 22 dbSNP
rs766355601 30 dbSNP
rs1469224704 32 dbSNP
rs1275479316 33 dbSNP
rs762688999 35 dbSNP
rs750218619 36 dbSNP
rs764878757 38 dbSNP
rs900061058 39 dbSNP
rs761386535 40 dbSNP
rs373466563 41 dbSNP
rs760309497 47 dbSNP
rs1035844287 53 dbSNP
rs1410341767 54 dbSNP
rs893976890 58 dbSNP
rs1054637951 59 dbSNP
rs1351807948 61 dbSNP
rs1305603096 62 dbSNP
rs1447663314 64 dbSNP
rs140277054 69 dbSNP
rs1359433716 71 dbSNP
rs543385178 72 dbSNP
rs1379490356 76 dbSNP
rs1177753761 80 dbSNP
rs1023237586 81 dbSNP
rs1290269862 88 dbSNP
rs777476296 89 dbSNP
rs1183553590 92 dbSNP
rs1385789227 93 dbSNP
rs560414992 93 dbSNP
rs769869749 95 dbSNP
rs1249753538 111 dbSNP
rs772408365 115 dbSNP
rs574808654 116 dbSNP
rs1353458988 119 dbSNP
rs891246150 120 dbSNP
rs1262789163 122 dbSNP
rs1351661545 127 dbSNP
rs1437142442 139 dbSNP
rs776088333 147 dbSNP
rs1323663773 148 dbSNP
rs1460667037 150 dbSNP
rs1438410593 156 dbSNP
rs1237913917 160 dbSNP
rs761002913 163 dbSNP
rs1160829138 167 dbSNP
rs746174997 168 dbSNP
rs779156380 173 dbSNP
rs949975074 181 dbSNP
rs759485017 183 dbSNP
rs771388612 198 dbSNP
rs1161050550 201 dbSNP
rs1212279860 203 dbSNP
rs555278957 209 dbSNP
rs1468305837 213 dbSNP
rs749469952 217 dbSNP
rs1327172895 221 dbSNP
rs1376809504 222 dbSNP
rs1351404939 231 dbSNP
rs1218172166 232 dbSNP
rs1016748075 237 dbSNP
rs540411879 238 dbSNP
rs951467488 239 dbSNP
rs988513513 242 dbSNP
rs1030094346 243 dbSNP
rs572645971 244 dbSNP
rs1373106057 245 dbSNP
rs969810089 251 dbSNP
rs1023567506 252 dbSNP
rs974177152 256 dbSNP
rs1422974657 258 dbSNP
rs1301153835 260 dbSNP
rs900092054 261 dbSNP
rs746804562 262 dbSNP
rs1160310695 266 dbSNP
rs1459303201 268 dbSNP
rs962934086 272 dbSNP
rs1461571098 273 dbSNP
rs750734228 273 dbSNP
rs1410458356 276 dbSNP
rs1400276474 278 dbSNP
rs1011145106 279 dbSNP
rs569644499 284 dbSNP
rs1460894806 287 dbSNP
rs1300379064 297 dbSNP
rs558874819 298 dbSNP
rs1395752707 299 dbSNP
rs1052587188 301 dbSNP
rs1469804712 304 dbSNP
rs1357589415 308 dbSNP
rs1234027162 316 dbSNP
rs1277606644 318 dbSNP
rs1305798084 323 dbSNP
rs1206563494 328 dbSNP
rs1180346104 341 dbSNP
rs1246080348 342 dbSNP
rs187990955 342 dbSNP
rs3835130 342 dbSNP
rs1461010805 344 dbSNP
rs1242329917 345 dbSNP
rs1475318548 345 dbSNP
rs113574403 348 dbSNP
rs1412934234 348 dbSNP
rs1007093236 349 dbSNP
rs1416815410 350 dbSNP
rs1240525391 351 dbSNP
rs1429727748 351 dbSNP
rs1465903332 352 dbSNP
rs1311415735 354 dbSNP
rs1377539939 355 dbSNP
rs1415659257 356 dbSNP
rs1297767053 358 dbSNP
rs1359970003 358 dbSNP
rs1216334692 360 dbSNP
rs1231873081 362 dbSNP
rs1282159436 362 dbSNP
rs1296296749 362 dbSNP
rs1311522055 362 dbSNP
rs1485855852 364 dbSNP
rs868379445 364 dbSNP
rs1215476816 370 dbSNP
rs1239948808 376 dbSNP
rs1486565847 378 dbSNP
rs1186578136 380 dbSNP
rs1420907415 383 dbSNP
rs902895375 396 dbSNP
rs1045818730 397 dbSNP
rs949757221 399 dbSNP
rs1397296063 402 dbSNP
rs79398753 405 dbSNP
rs1055660116 413 dbSNP
rs1297822925 417 dbSNP
rs1038890959 418 dbSNP
rs1433055683 418 dbSNP
rs1289502913 419 dbSNP
rs1366872725 423 dbSNP
rs941266850 424 dbSNP
rs569718997 427 dbSNP
rs763315486 428 dbSNP
rs114225819 430 dbSNP
rs982611676 431 dbSNP
rs1239080559 432 dbSNP
rs748250253 434 dbSNP
rs934365369 442 dbSNP
rs1245652377 444 dbSNP
rs1290311558 444 dbSNP
rs771725915 445 dbSNP
rs1192321521 450 dbSNP
rs922676218 455 dbSNP
rs981101662 456 dbSNP
rs1158342278 458 dbSNP
rs536217627 462 dbSNP
rs948483292 466 dbSNP
rs1176157013 468 dbSNP
rs865914516 469 dbSNP
rs915621492 471 dbSNP
rs535855815 473 dbSNP
rs1192279279 474 dbSNP
rs1454139059 486 dbSNP
rs868061170 488 dbSNP
rs964065205 496 dbSNP
rs1188603236 498 dbSNP
rs1485024664 502 dbSNP
rs1260296677 503 dbSNP
rs567132528 505 dbSNP
rs962838902 514 dbSNP
rs1367094793 519 dbSNP
rs1211773547 520 dbSNP
rs1277522488 521 dbSNP
rs1350129026 526 dbSNP
rs747643612 527 dbSNP
rs1224011166 528 dbSNP
rs1288631811 531 dbSNP
rs1011176085 535 dbSNP
rs958293312 544 dbSNP
rs983014067 546 dbSNP
rs1263894063 549 dbSNP
rs1326914180 552 dbSNP
rs1031592026 555 dbSNP
rs1297490794 566 dbSNP
rs758338436 570 dbSNP
rs1488031376 571 dbSNP
rs1469289002 576 dbSNP
rs1360917283 577 dbSNP
rs906688003 586 dbSNP
rs1285201791 587 dbSNP
rs1045494800 592 dbSNP
rs1030086196 599 dbSNP
rs1358119252 600 dbSNP
rs3179880 601 dbSNP
rs1416139288 602 dbSNP
rs1373063695 603 dbSNP
rs1172431853 606 dbSNP
rs996821105 607 dbSNP
rs547718507 608 dbSNP
rs1395177271 614 dbSNP
rs1409332534 617 dbSNP
rs1326710128 618 dbSNP
rs1356072283 620 dbSNP
rs527584198 627 dbSNP
rs1374077482 632 dbSNP
rs1172994894 634 dbSNP
rs1427107464 637 dbSNP
rs1261370433 638 dbSNP
rs1226153347 642 dbSNP
rs1486719621 651 dbSNP
rs571431195 652 dbSNP
rs1210192578 653 dbSNP
rs1340011759 655 dbSNP
rs1271435838 666 dbSNP
rs1439928387 672 dbSNP
rs1252997693 680 dbSNP
rs1225039537 681 dbSNP
rs1306678738 684 dbSNP
rs544132418 686 dbSNP
rs1055356950 687 dbSNP
rs1416276935 693 dbSNP
rs1353128546 698 dbSNP
rs1311757393 701 dbSNP
rs892954282 705 dbSNP
rs1397918914 711 dbSNP
rs1300402494 717 dbSNP
rs1397577518 721 dbSNP
rs532492324 725 dbSNP
rs999191549 726 dbSNP
rs1166060280 727 dbSNP
rs1476323762 730 dbSNP
rs907084265 732 dbSNP
rs1421566007 738 dbSNP
rs941299815 741 dbSNP
rs948410579 744 dbSNP
rs1388958213 745 dbSNP
rs909760553 746 dbSNP
rs1187392151 749 dbSNP
rs915691653 750 dbSNP
rs1363696059 753 dbSNP
rs1438450122 759 dbSNP
rs1252635975 767 dbSNP
rs1047345838 768 dbSNP
rs1480244925 770 dbSNP
rs929858845 771 dbSNP
rs563408277 772 dbSNP
rs79858696 775 dbSNP
rs1234841407 776 dbSNP
rs1332223552 778 dbSNP
rs183272376 779 dbSNP
rs763859928 780 dbSNP
rs1336993369 787 dbSNP
rs561122406 788 dbSNP
rs1390203399 789 dbSNP
rs1191096464 791 dbSNP
rs1400152419 794 dbSNP
rs922876815 796 dbSNP
rs975855261 797 dbSNP
rs1463284419 799 dbSNP
rs1392624181 802 dbSNP
rs775139723 804 dbSNP
rs1470574525 806 dbSNP
rs768076157 810 dbSNP
rs1179690013 811 dbSNP
rs1393062349 813 dbSNP
rs775978259 813 dbSNP
rs191619184 814 dbSNP
rs1215404638 815 dbSNP
rs1173886948 816 dbSNP
rs1466962267 817 dbSNP
rs1208997530 820 dbSNP
rs1272207379 824 dbSNP
rs1205322774 827 dbSNP
rs1339903460 837 dbSNP
rs964025543 837 dbSNP
rs1352346987 838 dbSNP
rs1279697272 842 dbSNP
rs1277293110 844 dbSNP
rs1237637946 846 dbSNP
rs989444207 849 dbSNP
rs1376822475 851 dbSNP
rs958542252 853 dbSNP
rs1304785234 854 dbSNP
rs1256870824 859 dbSNP
rs112636593 860 dbSNP
rs141386369 861 dbSNP
rs572608394 862 dbSNP
rs1447608013 863 dbSNP
rs369916222 863 dbSNP
rs555365508 863 dbSNP
rs12453588 864 dbSNP
rs1192947824 866 dbSNP
rs1323257872 868 dbSNP
rs1401523981 872 dbSNP
rs1387339049 874 dbSNP
rs1156899678 875 dbSNP
rs1031515735 876 dbSNP
rs1455477089 886 dbSNP
rs763532268 888 dbSNP
rs1250395896 891 dbSNP
rs1451140133 897 dbSNP
rs1159885923 898 dbSNP
rs1385065010 901 dbSNP
rs998659207 903 dbSNP
rs1000184743 904 dbSNP
rs970942667 905 dbSNP
rs879094647 914 dbSNP
rs1025084407 916 dbSNP
rs1045642467 917 dbSNP
rs1013970028 920 dbSNP
rs376859604 935 dbSNP
rs1013021255 944 dbSNP
rs894202631 945 dbSNP
rs894164803 953 dbSNP
rs1037972756 961 dbSNP
rs763893179 971 dbSNP
rs1428089486 973 dbSNP
rs73998419 975 dbSNP
rs1469749020 977 dbSNP
rs1191601462 992 dbSNP
rs865975249 993 dbSNP
rs145627084 994 dbSNP
rs888101706 997 dbSNP
rs866688754 1001 dbSNP
rs922873625 1014 dbSNP
rs1364012048 1016 dbSNP
rs12453726 1017 dbSNP
rs576218803 1020 dbSNP
rs1174198774 1029 dbSNP
rs114736025 1032 dbSNP
rs1392966041 1036 dbSNP
rs554936268 1038 dbSNP
rs780523855 1039 dbSNP
rs756482320 1044 dbSNP
rs1396246874 1045 dbSNP
rs536352264 1048 dbSNP
rs567297036 1053 dbSNP
rs942767095 1056 dbSNP
rs1351329565 1057 dbSNP
rs1435540761 1058 dbSNP
rs750766183 1062 dbSNP
rs915256548 1067 dbSNP
rs911277706 1068 dbSNP
rs1336994951 1071 dbSNP
rs1222232106 1074 dbSNP
rs1250622175 1077 dbSNP
rs1479572052 1078 dbSNP
rs186782312 1082 dbSNP
rs1197318189 1090 dbSNP
rs767661329 1097 dbSNP
rs989558694 1107 dbSNP
rs956779075 1110 dbSNP
rs1185294948 1116 dbSNP
rs1200667515 1117 dbSNP
rs936726255 1119 dbSNP
rs1373006073 1121 dbSNP
rs111850304 1123 dbSNP
rs1300245285 1124 dbSNP
rs535219927 1124 dbSNP
rs1223473604 1125 dbSNP
rs977691693 1125 dbSNP
rs1357448077 1128 dbSNP
rs1228956324 1130 dbSNP
rs978394299 1135 dbSNP
rs889949475 1137 dbSNP
rs971356694 1140 dbSNP
rs865858821 1148 dbSNP
rs1025114110 1155 dbSNP
rs73356308 1164 dbSNP
rs1290730432 1168 dbSNP
rs1346818858 1174 dbSNP
rs958457088 1178 dbSNP
rs1440164449 1185 dbSNP
rs777527893 1186 dbSNP
rs571423840 1187 dbSNP
rs115350643 1193 dbSNP
rs75397982 1201 dbSNP
rs886893823 1202 dbSNP
rs888148878 1202 dbSNP
rs934175194 1202 dbSNP
rs1025704560 1205 dbSNP
rs994117041 1208 dbSNP
rs901050558 1215 dbSNP
rs1377487214 1219 dbSNP
rs1040908884 1221 dbSNP
rs1288331293 1222 dbSNP
rs1469246999 1224 dbSNP
rs942546760 1226 dbSNP
rs942937077 1230 dbSNP
rs1346889328 1231 dbSNP
rs1231804440 1232 dbSNP
rs552077976 1234 dbSNP
rs989520061 1235 dbSNP
rs372842419 1243 dbSNP
rs568690298 1244 dbSNP
rs1187823092 1249 dbSNP
rs1258472280 1255 dbSNP
rs181717134 1262 dbSNP
rs530127737 1263 dbSNP
rs923977133 1264 dbSNP
rs1454152069 1265 dbSNP
rs1203486508 1267 dbSNP
rs763123801 1272 dbSNP
rs566210270 1277 dbSNP
rs118038890 1285 dbSNP
rs1158593751 1289 dbSNP
rs991243873 1291 dbSNP
rs541019603 1301 dbSNP
rs958657035 1302 dbSNP
rs1321215634 1307 dbSNP
rs1370142536 1314 dbSNP
rs1187787389 1319 dbSNP
rs1438507505 1324 dbSNP
rs949638619 1327 dbSNP
rs1222878738 1330 dbSNP
rs918134299 1333 dbSNP
rs1350058249 1344 dbSNP
rs1005206228 1345 dbSNP
rs766320099 1346 dbSNP
rs528008534 1348 dbSNP
rs1284784842 1357 dbSNP
rs1269373056 1362 dbSNP
rs1468402148 1364 dbSNP
rs886758108 1369 dbSNP
rs1025707648 1370 dbSNP
rs760428393 1377 dbSNP
rs1176840594 1378 dbSNP
rs1336289714 1379 dbSNP
rs1406056986 1381 dbSNP
rs565542076 1393 dbSNP
rs1159975346 1395 dbSNP
rs1389088496 1402 dbSNP
rs1459841007 1403 dbSNP
rs1039874882 1410 dbSNP
rs1325393669 1414 dbSNP
rs1350271183 1418 dbSNP
rs1441197346 1419 dbSNP
rs1277465584 1420 dbSNP
rs1375037021 1422 dbSNP
rs1228511858 1426 dbSNP
rs942842563 1434 dbSNP
rs894095605 1435 dbSNP
rs1054026361 1440 dbSNP
rs138513923 1441 dbSNP
rs923979020 1442 dbSNP
rs1204251897 1448 dbSNP
rs1231444273 1451 dbSNP
rs1383660386 1455 dbSNP
rs140202245 1459 dbSNP
rs1473481481 1465 dbSNP
rs1474236455 1466 dbSNP
rs1164939078 1472 dbSNP
rs576735612 1474 dbSNP
rs1414423911 1476 dbSNP
rs1409203251 1486 dbSNP
rs1383043547 1489 dbSNP
rs1355008289 1490 dbSNP
rs878862444 1498 dbSNP
rs1372132127 1500 dbSNP
rs150865785 1502 dbSNP
rs949500381 1506 dbSNP
rs1311835174 1510 dbSNP
rs1353026320 1510 dbSNP
rs1449576955 1513 dbSNP
rs1182592000 1518 dbSNP
rs1450543443 1521 dbSNP
rs542757381 1522 dbSNP
rs1214392549 1529 dbSNP
rs1271366245 1536 dbSNP
rs1344701660 1538 dbSNP
rs1206160587 1539 dbSNP
rs1250223911 1549 dbSNP
rs1214277617 1550 dbSNP
rs1257001284 1552 dbSNP
rs916651362 1554 dbSNP
rs983901503 1557 dbSNP
rs1189676370 1561 dbSNP
rs573610247 1564 dbSNP
rs991317668 1566 dbSNP
rs1238019984 1569 dbSNP
rs1475059617 1570 dbSNP
rs1290703690 1572 dbSNP
rs141520291 1576 dbSNP
rs952545965 1577 dbSNP
rs1025311542 1578 dbSNP
rs1172699586 1579 dbSNP
rs994207272 1579 dbSNP
rs1397319484 1585 dbSNP
rs1334213986 1586 dbSNP
rs773020438 1590 dbSNP
rs1229345310 1592 dbSNP
rs909828627 1593 dbSNP
rs1365669169 1594 dbSNP
rs1271675285 1595 dbSNP
rs1428581811 1599 dbSNP
rs984019976 1602 dbSNP
rs1345950053 1610 dbSNP
rs533521271 1618 dbSNP
rs1279445208 1619 dbSNP
rs965036874 1620 dbSNP
rs148361492 1622 dbSNP
rs557659244 1623 dbSNP
rs1006795734 1641 dbSNP
rs1426078251 1645 dbSNP
rs1449910511 1647 dbSNP
rs1363154650 1651 dbSNP
rs889650452 1654 dbSNP
rs1192749926 1666 dbSNP
rs1392923823 1666 dbSNP
rs752476800 1667 dbSNP
rs1162551377 1668 dbSNP
rs1467290264 1669 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uuGAUAUGUUGGAGGAUGGAGu 5'
            | || | ||:  ||||||| 
Target 5' --CCAUCCUACUGACUACCUCu 3'
1 - 20
Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
CLIP-seq Support 1 for dataset SRR1045082
Method / RBP PAR-CLIP / AGO2
Cell line / Condition MCF7 / Untreated
Location of target site ENST00000351904.7 | 3UTR | ccauccuacugacuaccucuug
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24398324 / SRX388831
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LIHC -0.334 0.01 -0.268 0.03 49 Click to see details
STAD -0.32 0.04 -0.442 0.01 32 Click to see details
KICH -0.336 0.05 -0.316 0.06 25 Click to see details
KIRP -0.237 0.1 -0.271 0.07 32 Click to see details
CHOL -0.42 0.13 -0.200 0.3 9 Click to see details
PAAD -0.716 0.14 -0.200 0.4 4 Click to see details
HNSC -0.16 0.16 -0.093 0.28 42 Click to see details
BRCA -0.103 0.18 -0.082 0.23 84 Click to see details
LUAD -0.27 0.2 0.105 0.37 12 Click to see details
LUSC 0.134 0.21 0.214 0.1 38 Click to see details
UCEC 0.186 0.22 0.209 0.2 19 Click to see details
PRAD 0.11 0.22 0.001 0.5 50 Click to see details
KIRC -0.079 0.26 -0.086 0.24 68 Click to see details
COAD -0.116 0.39 0.143 0.37 8 Click to see details
BLCA -0.051 0.42 -0.160 0.26 18 Click to see details
THCA 0.004 0.49 -0.080 0.27 59 Click to see details
PCPG 0.035 0.49 0.500 0.33 3 Click to see details
CESC -0.029 0.49 -0.500 0.33 3 Click to see details
ESCA 0.007 0.49 -0.064 0.43 11 Click to see details
ESCA 0.007 0.49 -0.064 0.43 11 Click to see details
ESCA 0.007 0.49 -0.064 0.43 11 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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