pre-miRNA Information | |
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pre-miRNA | hsa-mir-4781 |
Genomic Coordinates | chr1: 54054079 - 54054154 |
Description | Homo sapiens miR-4781 stem-loop |
Comment | None |
RNA Secondary Structure | ![]() |
Mature miRNA Information | |||||||||||||||||||||||||
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Mature miRNA | hsa-miR-4781-3p | ||||||||||||||||||||||||
Sequence | 46| AAUGUUGGAAUCCUCGCUAGAG |67 | ||||||||||||||||||||||||
Evidence | Experimental | ||||||||||||||||||||||||
Experiments | Illumina | ||||||||||||||||||||||||
SNPs in miRNA |
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Putative Targets |
Gene Information | |||||||||||||||||||||
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Gene Symbol | NFATC2IP | ||||||||||||||||||||
Synonyms | ESC2, NIP45, RAD60 | ||||||||||||||||||||
Description | nuclear factor of activated T-cells 2 interacting protein | ||||||||||||||||||||
Transcript | NM_032815 | ||||||||||||||||||||
Expression | |||||||||||||||||||||
Putative miRNA Targets on NFATC2IP | |||||||||||||||||||||
3'UTR of NFATC2IP (miRNA target sites are highlighted) |
>NFATC2IP|NM_032815|3'UTR 1 CACCCCACTCCCTGTTTGACGGCCCAGCCTGGACTTGGGGAGAATGACTTTCCCTTTTTTGCCCCATAAGGGCTAGCATA 81 AGCTGAGGTAGAACTTATCTTTAAGCTGCAGCAAAATCAAGGAGTGACTTTTGTCCCCTCTCCTGTTGACCCTGGTTTAG 161 AGCCGTTAACCACTTGGTGAGTTATGTGGGTGTTGTTGCCCTGGGTGGCCTGTGGCTCCGTCCACAAGTCATGCTGAGTT 241 TTGCAGCCTCTGTGACTTGGAGATGTCCCTTCACCCCTCCCCTTTCACCACCATCCTCTTTTCCTCATGGAAATGTCTGC 321 TTTATGAAACTATGCACATATTGAAAGTGAGTTGAAACAAATGAGGGTTGGGTAGGAGCTTCCAGGCCTGGGATTTACAC 401 CACGCCTAGCCCAGCAGAGGCCTTAGTCCCATTTGGGGCTTGGGAGTGACATTTGCTTGAGGCTTATACACTGGTGTGGT 481 TGCCTGGCTTGCAGGAAATGACCAAGCTCACACATGCTGGCTGAAGCGTAAGCAGACAACTGAGGTACTCTTTTGAAGGA 561 TGAAGGTGGTGGATTCTCAGCCCTGGGGGTCTTCCTCACCTGAGGACCCTTCAGAGCCACCCTTTCTAGTTTGCATTTCC 641 TGGTGCACACATTTAAGGCATAACAGCACATTCATCCCTTTGGTTTGGGATCTCAGGAATACAGTCCCATGCAAAGATTC 721 TCTGGTTTTATGGCTTTTTTCCCTTTCTTTACACCATCCTCTCCCATAAGCACCCATGTCTTTGAATATGAATGTATTTG 801 TAAAATACCACGTTTCATGTGTGAATATGTGCTTTTACTGTACATAGTGCTATTGTGCAATAGGTCTTATGCTGTTTTCA 881 CTCAATGTGTGCTAAGATCTAGCCCCATTGACTCTTCTAGAAATGCAGTATTGCTTTGACCTGCCATGTGGCACTCCACA 961 ATGTCAATTGCAGTTTACACACATTGCCTAAAGTGGGGGACACCTGGGTGCCCCTGACCCCTTGGCACCGGATACAGGCC 1041 ACGATAAACATCCTTTCGTGTGTTCCCTTCTGTGCTTGTGTGGCATGTGTACCCAGGATGGGCCTATAGGTCACAGAGGT 1121 CAGTTTCTCTTTGGTTTTCCAGATTTTCTTTAGAACGGTGACTGACCCTCCTACTTGAGGCCGCCCTTTTCTCCTTATCC 1201 TTGCCAGCACTTGTATTGCCAGACTACCTAATTTTTGCCAGTCTCATGGGTAGATAGTGGTGCAGTGCTTTAACATACAT 1281 TCATCTGATCAGCATTAATTTGGGGAATTTTTTCACTTAGCCTTTCTGGTTTCCCTTCCTGTGCATTGCCCATTTTCTCA 1361 TGGAGTTTCTTATCTTTTTTGGTTTATTCTCAGGAGTTGCTTGTACATTCTTGGGCAATTGCAGATAATTCCAAGAATGC 1441 ATATTTGGGCTGGGTATGGAGGTTCACTGGTAATCCCAGCACTTTGGGAGGCCCAGGCAGAAGGATCGCTGCAGCCCAGG 1521 AGTTCGAGACTAGCCTGGGCAACATAGCGAGACCTCGTCTCTACAAAAAAAAATTAAAAAGGGGGCTTTGGGAGGCCAAG 1601 GCGGGCAGATCATGAGGGCAGGAGATTGAGACCCTCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAATACAAAAAA 1681 TTAGCTGGGCATGGTGGCGCACACCTGTAGTCCCAGCTACTCTGGAGGCTGAGGCAGGGGAATCGCTTAAACCCAGGAGG 1761 CGGAGATTGCAGTGAGCCAAGGTTCCACCACTGCACTCCAGCCTGGCGACAGAGCAAGGCTCCACTCAAAAAAAAGATTT 1841 AAAGGGGAAAAAATTGAAATTTTCTTTGTATCTAGGGGTATCCGTCACTGAACAGAAATTCTTAATTTTGGCTAGGCGTG 1921 ATGGCTCAGGTCTGTAATCCCAGCACTTTCGGTGGCCGGGGTGGGTGGATCACTTGAGGCCAGGAGTTCAAGACCACCCT 2001 GACCAACTTGGTGAAATCCCATCTCTACTAAAAATACAAAAATTAGCTGGGTGCAGTGGCGCATGCTTGTAATCCCAGCT 2081 ACTCAGGAGGCAGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGCTGCAGTGAACAGAGACAGTGCCACTGCACAT 2161 CAGCCTGAGTGACAGAGAGACTTTGTCTCAAAAAAAAAAGAAAATTTTAATTTTAATGTAGACAGTATGAATTATCTTGT 2241 TCTGCAGTTGGTTGCTTTTTGATTGCTTATTTAATAGAGTTGTTAAGATATTTTACATCTTCTCCTGTTAGCTGTTCAGC 2321 TTTTCCTTTCATATTGAGAACACTACACAGTGCTGAAGTCCAGCTGGTACACACCGGGGTGACACCTTGGCTGCATCTGT 2401 TCTCAACAGTCAGACACTTCTTCTAATTGGTTGATGCTGGGCTGTACTGGTTGCTAAATATTGCACATCATTTTAAAACT 2481 ATTTGAGATGCACTTTTGTACTCAGGAGGCCAAGGCAGGAGGATTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAA 2561 CACAGCGAGACCTTGTCTCTTAAAAAAAAAAAAAAAAAAAAA Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
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DRVs in gene 3'UTRs | |||||||||||||||||||||
SNPs in gene 3'UTRs |
Experimental Support 1 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control
PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control
PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control
... - Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell. |
Article |
- Hafner M; Landthaler M; Burger L; Khorshid et al. - Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
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Experimental Support 2 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Disease | 84901.0 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1
"PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1
... - Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods. |
Article |
- Kishore S; Jaskiewicz L; Burger L; Hausser et al. - Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
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Experimental Support 3 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | hESCs (WA-09) |
Disease | 84901.0 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine
... - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development. |
Article |
- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al. - Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
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Experimental Support 4 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Disease | 84901.0 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine
"PAR-CLIP data was present in GSM1065668. RNA binding protein: AGO1. Condition:4-thiouridine
"PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine
... - Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature. |
Article |
- Memczak S; Jens M; Elefsinioti A; Torti F; et al. - Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
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Experimental Support 5 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
|
Conditions | MCF7 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated
... - Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology. |
Article |
- Farazi TA; Ten Hoeve JJ; Brown M; et al. - Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
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Experimental Support 6 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | Prostate Tissue |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in SRX1760641. RNA binding protein: AGO2. Condition:AGO-CLIP-LNCaP-MDV_B
PAR-CLIP data was present in SRX1760583. RNA binding protein: AGO2. Condition:AGO-CLIP-LNCaP_A
... - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.). |
Article |
- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al. - Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
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CLIP-seq Support 1 for dataset GSM4903828 | |
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Method / RBP | HITS-CLIP / AGO |
Cell line / Condition | Dermal fibroblasts / PID21_9124 |
Location of target site | NM_032815 | 3UTR | AGCCUGGGCAACAUAGCGAGACCUC |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Accession Series | GSE161237 |
CLIP-seq Viewer | Link |
CLIP-seq Support 2 for dataset GSM545212 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / Control |
Location of target site | ENST00000320805.4 | 3UTR | CUGGGCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 3 for dataset GSM545214 | |
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Method / RBP | PAR-CLIP / AGO3 |
Cell line / Condition | HEK293 / Control |
Location of target site | ENST00000320805.4 | 3UTR | UGGGCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 4 for dataset GSM545215 | |
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Method / RBP | PAR-CLIP / AGO4 |
Cell line / Condition | HEK293 / Control |
Location of target site | ENST00000320805.4 | 3UTR | UGGGCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 5 for dataset GSM714644 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / completeT1, repA |
Location of target site | ENST00000320805.4 | 3UTR | UAGCCUGGGCAACAUAGCGAGACCUCGUCUCUACA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21572407 / GSE28865 |
CLIP-seq Viewer | Link |
CLIP-seq Support 6 for dataset GSM714645 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / completeT1, repB |
Location of target site | ENST00000320805.4 | 3UTR | AGCCUGGGCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21572407 / GSE28865 |
CLIP-seq Viewer | Link |
CLIP-seq Support 7 for dataset SRR359787 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | hESCs (WA-09) / 4-thiouridine, RNase T1 |
Location of target site | ENST00000320805.4 | 3UTR | AGCCUGGGCAACAUAGCGAGACCUCGUCUCUAC |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 22012620 / SRX103431 |
CLIP-seq Viewer | Link |
CLIP-seq Support 8 for dataset GSM1065667 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / 4-thiouridine, ML_MM_6 |
Location of target site | ENST00000320805.4 | 3UTR | GCCUGGGCAACAUAGCGAGACCUCGUCUCUACA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23446348 / GSE43573 |
CLIP-seq Viewer | Link |
CLIP-seq Support 9 for dataset GSM1065668 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / 4-thiouridine, ML_MM_7 |
Location of target site | ENST00000320805.4 | 3UTR | CUGGGCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23446348 / GSE43573 |
CLIP-seq Viewer | Link |
CLIP-seq Support 10 for dataset GSM1065669 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / 4-thiouridine, ML_MM_8 |
Location of target site | ENST00000320805.4 | 3UTR | GCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23446348 / GSE43573 |
CLIP-seq Viewer | Link |
CLIP-seq Support 11 for dataset SRR1045082 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | MCF7 / Untreated |
Location of target site | ENST00000320805.4 | 3UTR | AGCCUGGGCAACAUAGCGAGACCUCGUCUCUA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 24398324 / SRX388831 |
CLIP-seq Viewer | Link |
MiRNA-Target Expression Profile | |||||||
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MiRNA-Target Expression Profile (TCGA) | |||||||
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ID![]() |
Target | Description | Validation methods |
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Strong evidence | Less strong evidence | |||||||||||
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MIRT071728 | CCNK | cyclin K | ![]() |
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2 | 2 | ||||||
MIRT184858 | FLVCR1 | feline leukemia virus subgroup C cellular receptor 1 | ![]() |
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2 | 2 | ||||||
MIRT205881 | TNRC6B | trinucleotide repeat containing 6B | ![]() |
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2 | 2 | ||||||
MIRT218699 | ANKS1A | ankyrin repeat and sterile alpha motif domain containing 1A | ![]() |
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2 | 2 | ||||||
MIRT223783 | OXR1 | oxidation resistance 1 | ![]() |
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2 | 2 | ||||||
MIRT242435 | GAN | gigaxonin | ![]() |
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2 | 2 | ||||||
MIRT306825 | NCBP2 | nuclear cap binding protein subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT334170 | CCND1 | cyclin D1 | ![]() |
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2 | 6 | ||||||
MIRT339617 | TMPO | thymopoietin | ![]() |
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2 | 2 | ||||||
MIRT400371 | C2ORF68 | chromosome 2 open reading frame 68 | ![]() |
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2 | 2 | ||||||
MIRT445533 | KIF1B | kinesin family member 1B | ![]() |
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2 | 4 | ||||||
MIRT450273 | F2RL2 | coagulation factor II thrombin receptor like 2 | ![]() |
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2 | 2 | ||||||
MIRT450701 | RORA | RAR related orphan receptor A | ![]() |
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2 | 2 | ||||||
MIRT451160 | C19orf53 | chromosome 19 open reading frame 53 | ![]() |
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2 | 2 | ||||||
MIRT453775 | NUCB1 | nucleobindin 1 | ![]() |
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2 | 10 | ||||||
MIRT453884 | IFRD1 | interferon related developmental regulator 1 | ![]() |
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2 | 12 | ||||||
MIRT454238 | OSBPL10 | oxysterol binding protein like 10 | ![]() |
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2 | 9 | ||||||
MIRT458661 | PAGR1 | PAXIP1 associated glutamate rich protein 1 | ![]() |
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2 | 12 | ||||||
MIRT466948 | STAU1 | staufen double-stranded RNA binding protein 1 | ![]() |
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2 | 2 | ||||||
MIRT470278 | PRKAA1 | protein kinase AMP-activated catalytic subunit alpha 1 | ![]() |
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2 | 2 | ||||||
MIRT471144 | PHF19 | PHD finger protein 19 | ![]() |
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2 | 2 | ||||||
MIRT471873 | NUFIP2 | NUFIP2, FMR1 interacting protein 2 | ![]() |
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2 | 2 | ||||||
MIRT476739 | FOXN2 | forkhead box N2 | ![]() |
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2 | 2 | ||||||
MIRT480453 | C16orf72 | chromosome 16 open reading frame 72 | ![]() |
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2 | 6 | ||||||
MIRT482107 | AKT3 | AKT serine/threonine kinase 3 | ![]() |
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2 | 4 | ||||||
MIRT483374 | CYP4A22 | cytochrome P450 family 4 subfamily A member 22 | ![]() |
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2 | 2 | ||||||
MIRT484063 | CYP4A11 | cytochrome P450 family 4 subfamily A member 11 | ![]() |
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2 | 2 | ||||||
MIRT496329 | SH3BGRL | SH3 domain binding glutamate rich protein like | ![]() |
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2 | 2 | ||||||
MIRT498659 | AP3B2 | adaptor related protein complex 3 beta 2 subunit | ![]() |
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2 | 4 | ||||||
MIRT498711 | PGAM5 | PGAM family member 5, mitochondrial serine/threonine protein phosphatase | ![]() |
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2 | 10 | ||||||
MIRT499322 | ZNF485 | zinc finger protein 485 | ![]() |
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2 | 6 | ||||||
MIRT499711 | NFATC2IP | nuclear factor of activated T-cells 2 interacting protein | ![]() |
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2 | 10 | ||||||
MIRT499767 | CIRH1A | UTP4, small subunit processome component | ![]() |
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2 | 6 | ||||||
MIRT499912 | PIGO | phosphatidylinositol glycan anchor biosynthesis class O | ![]() |
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2 | 8 | ||||||
MIRT504946 | ZSWIM6 | zinc finger SWIM-type containing 6 | ![]() |
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2 | 4 | ||||||
MIRT505377 | TMEM154 | transmembrane protein 154 | ![]() |
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2 | 4 | ||||||
MIRT508778 | GSG1 | germ cell associated 1 | ![]() |
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2 | 2 | ||||||
MIRT509793 | CHAF1B | chromatin assembly factor 1 subunit B | ![]() |
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2 | 4 | ||||||
MIRT512421 | LAYN | layilin | ![]() |
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2 | 4 | ||||||
MIRT513321 | SCUBE3 | signal peptide, CUB domain and EGF like domain containing 3 | ![]() |
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2 | 2 | ||||||
MIRT513592 | DCTN6 | dynactin subunit 6 | ![]() |
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2 | 2 | ||||||
MIRT514785 | RBM4B | RNA binding motif protein 4B | ![]() |
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2 | 2 | ||||||
MIRT514859 | PTPLAD2 | 3-hydroxyacyl-CoA dehydratase 4 | ![]() |
1 | 2 | |||||||
MIRT515122 | LMOD3 | leiomodin 3 | ![]() |
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2 | 2 | ||||||
MIRT515271 | CSNK1E | casein kinase 1 epsilon | ![]() |
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2 | 2 | ||||||
MIRT515594 | FBXL13 | F-box and leucine rich repeat protein 13 | ![]() |
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2 | 2 | ||||||
MIRT515880 | PLXDC2 | plexin domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT515908 | AGTPBP1 | ATP/GTP binding protein 1 | ![]() |
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2 | 2 | ||||||
MIRT515960 | C9orf156 | tRNA methyltransferase O | ![]() |
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2 | 2 | ||||||
MIRT517210 | OTUD6A | OTU deubiquitinase 6A | ![]() |
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2 | 2 | ||||||
MIRT517330 | ZNF347 | zinc finger protein 347 | ![]() |
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2 | 2 | ||||||
MIRT517480 | PEX26 | peroxisomal biogenesis factor 26 | ![]() |
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2 | 2 | ||||||
MIRT517594 | ZNF579 | zinc finger protein 579 | ![]() |
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2 | 4 | ||||||
MIRT517676 | TRIM72 | tripartite motif containing 72 | ![]() |
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2 | 2 | ||||||
MIRT518215 | TRMT10B | tRNA methyltransferase 10B | ![]() |
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2 | 2 | ||||||
MIRT518583 | ATP8B1 | ATPase phospholipid transporting 8B1 | ![]() |
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2 | 2 | ||||||
MIRT518777 | ZFP14 | ZFP14 zinc finger protein | ![]() |
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2 | 2 | ||||||
MIRT519094 | SLC4A1 | solute carrier family 4 member 1 (Diego blood group) | ![]() |
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2 | 4 | ||||||
MIRT519112 | ALG1 | ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase | ![]() |
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2 | 2 | ||||||
MIRT519400 | DNASE2 | deoxyribonuclease 2, lysosomal | ![]() |
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2 | 4 | ||||||
MIRT519446 | GLA | galactosidase alpha | ![]() |
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2 | 2 | ||||||
MIRT519476 | SPTLC2 | serine palmitoyltransferase long chain base subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT519711 | ZNF584 | zinc finger protein 584 | ![]() |
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2 | 4 | ||||||
MIRT521409 | RDH11 | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | ![]() |
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2 | 2 | ||||||
MIRT521522 | QSOX1 | quiescin sulfhydryl oxidase 1 | ![]() |
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2 | 2 | ||||||
MIRT522652 | MANEAL | mannosidase endo-alpha like | ![]() |
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2 | 2 | ||||||
MIRT523505 | GMPS | guanine monophosphate synthase | ![]() |
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2 | 4 | ||||||
MIRT523795 | FAM63B | MINDY lysine 48 deubiquitinase 2 | ![]() |
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2 | 2 | ||||||
MIRT524062 | DNAJC8 | DnaJ heat shock protein family (Hsp40) member C8 | ![]() |
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2 | 2 | ||||||
MIRT524136 | DMXL1 | Dmx like 1 | ![]() |
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2 | 2 | ||||||
MIRT524192 | DENND4C | DENN domain containing 4C | ![]() |
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2 | 4 | ||||||
MIRT525925 | KIAA0391 | KIAA0391 | ![]() |
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2 | 2 | ||||||
MIRT528021 | ACOT9 | acyl-CoA thioesterase 9 | ![]() |
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2 | 2 | ||||||
MIRT528685 | CEP57L1 | centrosomal protein 57 like 1 | ![]() |
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2 | 2 | ||||||
MIRT528769 | CD1D | CD1d molecule | ![]() |
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2 | 2 | ||||||
MIRT529373 | YWHAB | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta | ![]() |
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2 | 4 | ||||||
MIRT529469 | ZNF546 | zinc finger protein 546 | ![]() |
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2 | 2 | ||||||
MIRT529641 | ZNF621 | zinc finger protein 621 | ![]() |
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2 | 2 | ||||||
MIRT530681 | CHRNB1 | cholinergic receptor nicotinic beta 1 subunit | ![]() |
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2 | 4 | ||||||
MIRT530752 | GPR82 | G protein-coupled receptor 82 | ![]() |
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2 | 2 | ||||||
MIRT531628 | TM4SF5 | transmembrane 4 L six family member 5 | ![]() |
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2 | 4 | ||||||
MIRT531649 | C19orf52 | translocase of inner mitochondrial membrane 29 | ![]() |
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2 | 4 | ||||||
MIRT532179 | SEC14L5 | SEC14 like lipid binding 5 | ![]() |
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2 | 4 | ||||||
MIRT532219 | CCDC117 | coiled-coil domain containing 117 | ![]() |
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2 | 2 | ||||||
MIRT534238 | SLC25A16 | solute carrier family 25 member 16 | ![]() |
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2 | 4 | ||||||
MIRT539952 | SLC30A5 | solute carrier family 30 member 5 | ![]() |
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2 | 2 | ||||||
MIRT540179 | MB21D1 | Mab-21 domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT540466 | ZNF71 | zinc finger protein 71 | ![]() |
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2 | 2 | ||||||
MIRT540560 | PPIC | peptidylprolyl isomerase C | ![]() |
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2 | 2 | ||||||
MIRT543265 | ZNF662 | zinc finger protein 662 | ![]() |
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2 | 2 | ||||||
MIRT543596 | KIAA1549 | KIAA1549 | ![]() |
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2 | 2 | ||||||
MIRT543971 | RNF20 | ring finger protein 20 | ![]() |
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2 | 2 | ||||||
MIRT544053 | C9orf64 | chromosome 9 open reading frame 64 | ![]() |
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2 | 2 | ||||||
MIRT544605 | DCAF5 | DDB1 and CUL4 associated factor 5 | ![]() |
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2 | 2 | ||||||
MIRT544679 | AP1S1 | adaptor related protein complex 1 sigma 1 subunit | ![]() |
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2 | 2 | ||||||
MIRT547627 | LCOR | ligand dependent nuclear receptor corepressor | ![]() |
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2 | 2 | ||||||
MIRT550668 | TRAF1 | TNF receptor associated factor 1 | ![]() |
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2 | 2 | ||||||
MIRT551533 | EMB | embigin | ![]() |
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2 | 2 | ||||||
MIRT552443 | ZNF449 | zinc finger protein 449 | ![]() |
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2 | 2 | ||||||
MIRT559265 | BAG4 | BCL2 associated athanogene 4 | ![]() |
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2 | 4 | ||||||
MIRT562479 | CHORDC1 | cysteine and histidine rich domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT564211 | SDE2 | SDE2 telomere maintenance homolog | ![]() |
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2 | 2 | ||||||
MIRT565973 | RPP14 | ribonuclease P/MRP subunit p14 | ![]() |
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2 | 2 | ||||||
MIRT570524 | SHH | sonic hedgehog | ![]() |
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2 | 2 | ||||||
MIRT575307 | Osbpl10 | oxysterol binding protein-like 10 | ![]() |
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2 | 6 | ||||||
MIRT618212 | C22orf39 | chromosome 22 open reading frame 39 | ![]() |
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2 | 2 | ||||||
MIRT620115 | HARBI1 | harbinger transposase derived 1 | ![]() |
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2 | 2 | ||||||
MIRT624062 | EIF4E | eukaryotic translation initiation factor 4E | ![]() |
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2 | 2 | ||||||
MIRT626083 | CWF19L1 | CWF19 like 1, cell cycle control (S. pombe) | ![]() |
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2 | 2 | ||||||
MIRT629868 | GATAD1 | GATA zinc finger domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT630750 | COG6 | component of oligomeric golgi complex 6 | ![]() |
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2 | 2 | ||||||
MIRT631002 | ZNF573 | zinc finger protein 573 | ![]() |
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2 | 2 | ||||||
MIRT631100 | UQCRB | ubiquinol-cytochrome c reductase binding protein | ![]() |
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2 | 2 | ||||||
MIRT631290 | SGSM1 | small G protein signaling modulator 1 | ![]() |
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2 | 2 | ||||||
MIRT631337 | CD300E | CD300e molecule | ![]() |
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2 | 2 | ||||||
MIRT631532 | MYO6 | myosin VI | ![]() |
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2 | 2 | ||||||
MIRT631644 | WDR91 | WD repeat domain 91 | ![]() |
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2 | 4 | ||||||
MIRT632788 | LZIC | leucine zipper and CTNNBIP1 domain containing | ![]() |
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2 | 2 | ||||||
MIRT633282 | FGFR1OP2 | FGFR1 oncogene partner 2 | ![]() |
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2 | 2 | ||||||
MIRT633593 | ABRACL | ABRA C-terminal like | ![]() |
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2 | 2 | ||||||
MIRT634074 | PLIN3 | perilipin 3 | ![]() |
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2 | 2 | ||||||
MIRT634163 | YME1L1 | YME1 like 1 ATPase | ![]() |
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2 | 2 | ||||||
MIRT634257 | TIAL1 | TIA1 cytotoxic granule associated RNA binding protein like 1 | ![]() |
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2 | 2 | ||||||
MIRT634679 | GDE1 | glycerophosphodiester phosphodiesterase 1 | ![]() |
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2 | 2 | ||||||
MIRT638384 | RABL3 | RAB, member of RAS oncogene family like 3 | ![]() |
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2 | 2 | ||||||
MIRT638687 | GCLM | glutamate-cysteine ligase modifier subunit | ![]() |
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2 | 2 | ||||||
MIRT640311 | PRR13 | proline rich 13 | ![]() |
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2 | 2 | ||||||
MIRT641132 | NPHP3 | nephrocystin 3 | ![]() |
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2 | 2 | ||||||
MIRT642315 | FPR1 | formyl peptide receptor 1 | ![]() |
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2 | 2 | ||||||
MIRT643703 | KIAA0586 | KIAA0586 | ![]() |
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2 | 2 | ||||||
MIRT644322 | NFKBID | NFKB inhibitor delta | ![]() |
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2 | 2 | ||||||
MIRT645741 | POLR3A | RNA polymerase III subunit A | ![]() |
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2 | 2 | ||||||
MIRT646975 | CYP2W1 | cytochrome P450 family 2 subfamily W member 1 | ![]() |
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2 | 2 | ||||||
MIRT648064 | TRMT10C | tRNA methyltransferase 10C, mitochondrial RNase P subunit | ![]() |
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2 | 2 | ||||||
MIRT648536 | CHCHD4 | coiled-coil-helix-coiled-coil-helix domain containing 4 | ![]() |
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2 | 2 | ||||||
MIRT649294 | NEK8 | NIMA related kinase 8 | ![]() |
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2 | 2 | ||||||
MIRT650014 | KLB | klotho beta | ![]() |
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2 | 2 | ||||||
MIRT650551 | YIPF4 | Yip1 domain family member 4 | ![]() |
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2 | 2 | ||||||
MIRT651796 | UTP6 | UTP6, small subunit processome component | ![]() |
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2 | 2 | ||||||
MIRT652647 | TIMM10 | translocase of inner mitochondrial membrane 10 | ![]() |
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2 | 2 | ||||||
MIRT653548 | SLC38A7 | solute carrier family 38 member 7 | ![]() |
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2 | 2 | ||||||
MIRT653895 | SGK3 | serum/glucocorticoid regulated kinase family member 3 | ![]() |
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2 | 2 | ||||||
MIRT655470 | PAK3 | p21 (RAC1) activated kinase 3 | ![]() |
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2 | 2 | ||||||
MIRT657764 | GMEB1 | glucocorticoid modulatory element binding protein 1 | ![]() |
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2 | 2 | ||||||
MIRT659118 | DENND6A | DENN domain containing 6A | ![]() |
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2 | 2 | ||||||
MIRT659377 | CREG2 | cellular repressor of E1A stimulated genes 2 | ![]() |
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2 | 2 | ||||||
MIRT659836 | CARHSP1 | calcium regulated heat stable protein 1 | ![]() |
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2 | 2 | ||||||
MIRT659954 | C8orf44-SGK3 | C8orf44-SGK3 readthrough | ![]() |
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2 | 2 | ||||||
MIRT660258 | BLOC1S6 | biogenesis of lysosomal organelles complex 1 subunit 6 | ![]() |
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2 | 2 | ||||||
MIRT663268 | ATP1A2 | ATPase Na+/K+ transporting subunit alpha 2 | ![]() |
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2 | 2 | ||||||
MIRT663766 | ZNF285 | zinc finger protein 285 | ![]() |
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2 | 2 | ||||||
MIRT666198 | SMCR8 | Smith-Magenis syndrome chromosome region, candidate 8 | ![]() |
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2 | 2 | ||||||
MIRT669763 | ZNF101 | zinc finger protein 101 | ![]() |
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2 | 4 | ||||||
MIRT669933 | LRPAP1 | LDL receptor related protein associated protein 1 | ![]() |
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2 | 2 | ||||||
MIRT670007 | GPR156 | G protein-coupled receptor 156 | ![]() |
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2 | 4 | ||||||
MIRT670465 | RSBN1L | round spermatid basic protein 1 like | ![]() |
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2 | 2 | ||||||
MIRT670868 | IFNAR1 | interferon alpha and beta receptor subunit 1 | ![]() |
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2 | 4 | ||||||
MIRT671313 | RABGAP1L | RAB GTPase activating protein 1 like | ![]() |
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2 | 2 | ||||||
MIRT671959 | SPPL3 | signal peptide peptidase like 3 | ![]() |
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2 | 2 | ||||||
MIRT672281 | SHE | Src homology 2 domain containing E | ![]() |
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2 | 2 | ||||||
MIRT673654 | CYCS | cytochrome c, somatic | ![]() |
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2 | 2 | ||||||
MIRT674063 | ATXN3 | ataxin 3 | ![]() |
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2 | 2 | ||||||
MIRT674423 | IPP | intracisternal A particle-promoted polypeptide | ![]() |
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2 | 2 | ||||||
MIRT674438 | MIOX | myo-inositol oxygenase | ![]() |
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2 | 4 | ||||||
MIRT674483 | BCL2L15 | BCL2 like 15 | ![]() |
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2 | 2 | ||||||
MIRT675478 | NUBPL | nucleotide binding protein like | ![]() |
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2 | 2 | ||||||
MIRT675648 | TTPAL | alpha tocopherol transfer protein like | ![]() |
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2 | 2 | ||||||
MIRT675981 | FAM126B | family with sequence similarity 126 member B | ![]() |
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2 | 2 | ||||||
MIRT676251 | PARP2 | poly(ADP-ribose) polymerase 2 | ![]() |
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2 | 2 | ||||||
MIRT677652 | HAUS2 | HAUS augmin like complex subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT682718 | KIAA1456 | KIAA1456 | ![]() |
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2 | 2 | ||||||
MIRT687545 | MOB1B | MOB kinase activator 1B | ![]() |
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2 | 2 | ||||||
MIRT689620 | AKAP6 | A-kinase anchoring protein 6 | ![]() |
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2 | 2 | ||||||
MIRT690035 | CCDC90B | coiled-coil domain containing 90B | ![]() |
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2 | 2 | ||||||
MIRT691449 | CXorf36 | chromosome X open reading frame 36 | ![]() |
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2 | 2 | ||||||
MIRT691549 | FLYWCH2 | FLYWCH family member 2 | ![]() |
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2 | 2 | ||||||
MIRT691737 | LARS | leucyl-tRNA synthetase | ![]() |
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2 | 2 | ||||||
MIRT692638 | SUSD1 | sushi domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT693866 | IYD | iodotyrosine deiodinase | ![]() |
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2 | 2 | ||||||
MIRT693979 | ZNF70 | zinc finger protein 70 | ![]() |
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2 | 2 | ||||||
MIRT694150 | CYP27C1 | cytochrome P450 family 27 subfamily C member 1 | ![]() |
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2 | 2 | ||||||
MIRT695492 | TRAT1 | T-cell receptor associated transmembrane adaptor 1 | ![]() |
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2 | 2 | ||||||
MIRT695547 | MAP4K2 | mitogen-activated protein kinase kinase kinase kinase 2 | ![]() |
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2 | 2 | ||||||
MIRT696023 | TYRO3 | TYRO3 protein tyrosine kinase | ![]() |
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2 | 2 | ||||||
MIRT696402 | CORO7 | coronin 7 | ![]() |
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2 | 2 | ||||||
MIRT703028 | HEATR5A | HEAT repeat containing 5A | ![]() |
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2 | 2 | ||||||
MIRT703559 | FKBP14 | FK506 binding protein 14 | ![]() |
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2 | 2 | ||||||
MIRT705036 | CACUL1 | CDK2 associated cullin domain 1 | ![]() |
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2 | 2 | ||||||
MIRT705120 | C4orf29 | abhydrolase domain containing 18 | ![]() |
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2 | 2 | ||||||
MIRT706611 | CYB5B | cytochrome b5 type B | ![]() |
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2 | 2 | ||||||
MIRT706635 | PNPT1 | polyribonucleotide nucleotidyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT706730 | RFK | riboflavin kinase | ![]() |
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2 | 2 | ||||||
MIRT706868 | MAFF | MAF bZIP transcription factor F | ![]() |
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2 | 2 | ||||||
MIRT707020 | RRP36 | ribosomal RNA processing 36 | ![]() |
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2 | 2 | ||||||
MIRT707036 | ACTR5 | ARP5 actin related protein 5 homolog | ![]() |
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2 | 2 | ||||||
MIRT707125 | ZNF154 | zinc finger protein 154 | ![]() |
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2 | 2 | ||||||
MIRT707390 | SLC35F6 | solute carrier family 35 member F6 | ![]() |
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2 | 2 | ||||||
MIRT708664 | LYRM7 | LYR motif containing 7 | ![]() |
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2 | 2 | ||||||
MIRT713010 | BBX | BBX, HMG-box containing | ![]() |
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2 | 2 | ||||||
MIRT717314 | TRAF3IP1 | TRAF3 interacting protein 1 | ![]() |
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2 | 2 | ||||||
MIRT721912 | C6orf201 | chromosome 6 open reading frame 201 | ![]() |
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2 | 2 | ||||||
MIRT723050 | YTHDC1 | YTH domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT725038 | NDUFAF7 | NADH:ubiquinone oxidoreductase complex assembly factor 7 | ![]() |
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2 | 2 | ||||||
MIRT755316 | SMAD5 | SMAD family member 5 | 4 | 1 |
miRNA-Drug Resistance Associations | ||||||||||||||||||||||||||||||||||||||||||||||||||
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