pre-miRNA Information | |
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pre-miRNA | hsa-mir-4433a |
Genomic Coordinates | chr2: 64340759 - 64340839 |
Description | Homo sapiens miR-4433a stem-loop |
Comment | None |
RNA Secondary Structure | ![]() |
Mature miRNA Information | |||||||||||||
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Mature miRNA | hsa-miR-4433a-3p | ||||||||||||
Sequence | 51| ACAGGAGUGGGGGUGGGACAU |71 | ||||||||||||
Evidence | Experimental | ||||||||||||
Experiments | Illumina | ||||||||||||
SNPs in miRNA |
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Putative Targets |
miRNA Expression profile | |
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Human miRNA Tissue Atlas | |
Circulating MicroRNA Expression Profiling |
Gene Information | |||||||||||||||||||||
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Gene Symbol | SMAD7 | ||||||||||||||||||||
Synonyms | CRCS3, MADH7, MADH8 | ||||||||||||||||||||
Description | SMAD family member 7 | ||||||||||||||||||||
Transcript | NM_005904 | ||||||||||||||||||||
Expression | |||||||||||||||||||||
Putative miRNA Targets on SMAD7 | |||||||||||||||||||||
3'UTR of SMAD7 (miRNA target sites are highlighted) |
>SMAD7|NM_005904|3'UTR 1 CCGCGTGCGGAGGGGACAGAGCGTGAGCTGAGCAGGCCACACTTCAAACTACTTTGCTGCTAATATTTTCCTCCTGAGTG 81 CTTGCTTTTCATGCAAACTCTTTGGTCGTTTTTTTTTTGTTTGTTGGTTGGTTTTCTTCTTCTCGTCCTCGTTTGTGTTC 161 TGTTTTGTTTCGCTCTTTGAGAAATAGCTTATGAAAAGAATTGTTGGGGGTTTTTTTGGAAGAAGGGGCAGGTATGATCG 241 GCAGGACACCCTGATAGGAAGAGGGGAAGCAGAAATCCAAGCACCACCAAACACAGTGTATGAAGGGGGGCGGTCATCAT 321 TTCACTTGTCAGGAGTGTGTGTGAGTGTGAGTGTGCGGCTGTGTGTGCACGCGTGTGCAGGAGCGGCAGATGGGGAGACA 401 ACGTGCTCTTTGTTTTGTGTCTCTTATGGATGTCCCCAGCAGAGAGGTTTGCAGTCCCAAGCGGTGTCTCTCCTGCCCCT 481 TGGACACGCTCAGTGGGGCAGAGGCAGTACCTGGGCAAGCTGGCGGCTGGGGTCCCAGCAGCTGCCAGGAGCACGGCTCT 561 GTCCCCAGCCTGGGAAAGCCCCTGCCCCTCCTCTCCCTCATCAAGGACACGGGCCTGTCCACAGGCTTCTGAGCAGCGAG 641 CCTGCTAGTGGCCGAACCAGAACCAATTATTTTCATCCTTGTCTTATTCCCTTCCTGCCAGCCCCTGCCATTGTAGCGTC 721 TTTCTTTTTTGGCCATCTGCTCCTGGATCTCCCTGAGATGGGCTTCCCAAGGGCTGCCGGGGCAGCCCCCTCACAGTATT 801 GCTCACCCAGTGCCCTCTCCCCTCAGCCTCTCCCCTGCCTGCCCTGGTGACATCAGGTTTTTCCCGGACTTAGAAAACCA 881 GCTCAGCACTGCCTGCTCCCATCCTGTGTGTTAAGCTCTGCTATTAGGCCAGCAAGCGGGGATGTCCCTGGGAGGGACAT 961 GCTTAGCAGTCCCCTTCCCTCCAAGAAGGATTTGGTCCGTCATAACCCAAGGTACCATCCTAGGCTGACACCTAACTCTT 1041 CTTTCATTTCTTCTACAACTCATACACTCGTATGATACTTCGACACTGTTCTTAGCTCAATGAGCATGTTTAGACTTTAA 1121 CATAAGCTATTTTTCTAACTACAAAGGTTTAAATGAACAAGAGAAGCATTCTCATTGGAAATTTAGCATTGTAGTGCTTT 1201 GAGAGAGAAAGGACTCCTGAAAAAAAACCTGAGATTTATTAAAGAAAAAAATGTATTTTATGTTATATATAAATATATTA 1281 TTACTTGTAAATATAAAGACGTTTTATAAGCATCATTATTTATGTATTGTGCAATGTGTATAAACAAGAAAAATAAAGAA 1361 AAGATGCACTTTGCTTTAATATAAATGCAAATAACAAATGCCAAATTAAAAAAGATAAACACAAGATTGGTGTTTTTTTC 1441 TATGGGTGTTATCACCTAGCTGAATGTTTTTCTAAAGGAGTTTATGTTCCATTAAACGATTTTTAAAATGTACACTTGAA Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
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DRVs in gene 3'UTRs | |||||||||||||||||||||
SNPs in gene 3'UTRs |
Experimental Support 1 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control
PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control
PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection
... - Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell. |
Article |
- Hafner M; Landthaler M; Burger L; Khorshid et al. - Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
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Experimental Support 2 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Disease | 4092.0 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1
... - Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods. |
Article |
- Kishore S; Jaskiewicz L; Burger L; Hausser et al. - Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
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Experimental Support 3 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Disease | 4092.0 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine
"PAR-CLIP data was present in GSM1065668. RNA binding protein: AGO1. Condition:4-thiouridine
"PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine
... - Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature. |
Article |
- Memczak S; Jens M; Elefsinioti A; Torti F; et al. - Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
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Experimental Support 4 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | MCF7 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated
... - Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology. |
Article |
- Farazi TA; Ten Hoeve JJ; Brown M; et al. - Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
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CLIP-seq Support 1 for dataset GSM545212 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / Control |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCCUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 2 for dataset GSM545214 | |
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Method / RBP | PAR-CLIP / AGO3 |
Cell line / Condition | HEK293 / Control |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCC |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 3 for dataset GSM545216 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / miR-124 transfection |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCCU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 4 for dataset GSM714645 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / completeT1, repB |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCCUGA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21572407 / GSE28865 |
CLIP-seq Viewer | Link |
CLIP-seq Support 5 for dataset GSM1065667 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / 4-thiouridine, ML_MM_6 |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCCUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23446348 / GSE43573 |
CLIP-seq Viewer | Link |
CLIP-seq Support 6 for dataset GSM1065668 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / 4-thiouridine, ML_MM_7 |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23446348 / GSE43573 |
CLIP-seq Viewer | Link |
CLIP-seq Support 7 for dataset GSM1065669 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / 4-thiouridine, ML_MM_8 |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCCUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 23446348 / GSE43573 |
CLIP-seq Viewer | Link |
CLIP-seq Support 8 for dataset SRR1045082 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | MCF7 / Untreated |
Location of target site | ENST00000262158.2 | 3UTR | CCACACUUCAAACUACUUUGCUGCUAAUAUUUUCCUCCUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 24398324 / SRX388831 |
CLIP-seq Viewer | Link |
MiRNA-Target Expression Profile | |||||||
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MiRNA-Target Expression Profile (TCGA) | |||||||
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256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID![]() |
Target | Description | Validation methods |
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Strong evidence | Less strong evidence | |||||||||||
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MIRT088097 | SEPT2 | septin 2 | ![]() |
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2 | 2 | ||||||
MIRT143134 | MGRN1 | mahogunin ring finger 1 | ![]() |
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2 | 2 | ||||||
MIRT153912 | NCOA3 | nuclear receptor coactivator 3 | ![]() |
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2 | 2 | ||||||
MIRT154894 | GNAS | GNAS complex locus | ![]() |
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2 | 4 | ||||||
MIRT200996 | ZNF805 | zinc finger protein 805 | ![]() |
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2 | 2 | ||||||
MIRT215729 | C5ORF51 | chromosome 5 open reading frame 51 | ![]() |
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2 | 10 | ||||||
MIRT235593 | POFUT1 | protein O-fucosyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT263250 | SGPL1 | sphingosine-1-phosphate lyase 1 | ![]() |
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2 | 2 | ||||||
MIRT317951 | CDC5L | cell division cycle 5 like | ![]() |
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2 | 4 | ||||||
MIRT325572 | HIATL1 | major facilitator superfamily domain containing 14B | ![]() |
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2 | 4 | ||||||
MIRT354739 | LSM3 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | ![]() |
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2 | 2 | ||||||
MIRT444552 | UBE2D3 | ubiquitin conjugating enzyme E2 D3 | ![]() |
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2 | 4 | ||||||
MIRT446978 | SUSD5 | sushi domain containing 5 | ![]() |
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2 | 2 | ||||||
MIRT451036 | ZNF610 | zinc finger protein 610 | ![]() |
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2 | 2 | ||||||
MIRT451596 | TRPM7 | transient receptor potential cation channel subfamily M member 7 | ![]() |
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2 | 2 | ||||||
MIRT452025 | NLRP6 | NLR family pyrin domain containing 6 | ![]() |
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2 | 2 | ||||||
MIRT452594 | CA6 | carbonic anhydrase 6 | ![]() |
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2 | 2 | ||||||
MIRT452768 | TCEA3 | transcription elongation factor A3 | ![]() |
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2 | 4 | ||||||
MIRT452959 | ZNF844 | zinc finger protein 844 | ![]() |
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2 | 2 | ||||||
MIRT453191 | ACSF2 | acyl-CoA synthetase family member 2 | ![]() |
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2 | 2 | ||||||
MIRT453382 | RHD | Rh blood group D antigen | ![]() |
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2 | 2 | ||||||
MIRT453685 | CEBPD | CCAAT/enhancer binding protein delta | ![]() |
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2 | 2 | ||||||
MIRT455272 | DDX39B | DExD-box helicase 39B | ![]() |
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2 | 8 | ||||||
MIRT455346 | BAMBI | BMP and activin membrane bound inhibitor | ![]() |
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2 | 2 | ||||||
MIRT456494 | SERAC1 | serine active site containing 1 | ![]() |
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2 | 2 | ||||||
MIRT456585 | NID1 | nidogen 1 | ![]() |
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2 | 2 | ||||||
MIRT456888 | DDA1 | DET1 and DDB1 associated 1 | ![]() |
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2 | 2 | ||||||
MIRT457123 | APOLD1 | apolipoprotein L domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT457852 | ZNF324B | zinc finger protein 324B | ![]() |
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2 | 2 | ||||||
MIRT457987 | APAF1 | apoptotic peptidase activating factor 1 | ![]() |
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2 | 2 | ||||||
MIRT459278 | APOBEC3F | apolipoprotein B mRNA editing enzyme catalytic subunit 3F | ![]() |
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2 | 2 | ||||||
MIRT459625 | SLC25A33 | solute carrier family 25 member 33 | ![]() |
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2 | 2 | ||||||
MIRT459715 | SGK494 | uncharacterized serine/threonine-protein kinase SgK494 | ![]() |
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2 | 2 | ||||||
MIRT460057 | RPL22L1 | ribosomal protein L22 like 1 | ![]() |
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2 | 2 | ||||||
MIRT460182 | UNK | unkempt family zinc finger | ![]() |
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2 | 6 | ||||||
MIRT460288 | PDE11A | phosphodiesterase 11A | ![]() |
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2 | 2 | ||||||
MIRT460841 | EGF | epidermal growth factor | ![]() |
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2 | 4 | ||||||
MIRT460860 | TBC1D19 | TBC1 domain family member 19 | ![]() |
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2 | 2 | ||||||
MIRT461519 | EMC7 | ER membrane protein complex subunit 7 | ![]() |
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2 | 2 | ||||||
MIRT461729 | SLC27A1 | solute carrier family 27 member 1 | ![]() |
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2 | 4 | ||||||
MIRT461821 | SNAP23 | synaptosome associated protein 23 | ![]() |
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2 | 2 | ||||||
MIRT462066 | CCDC77 | coiled-coil domain containing 77 | ![]() |
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2 | 4 | ||||||
MIRT462084 | MSANTD2 | Myb/SANT DNA binding domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT462508 | MTFMT | mitochondrial methionyl-tRNA formyltransferase | ![]() |
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2 | 10 | ||||||
MIRT464239 | VCP | valosin containing protein | ![]() |
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2 | 2 | ||||||
MIRT465316 | TRAF5 | TNF receptor associated factor 5 | ![]() |
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2 | 2 | ||||||
MIRT466549 | TBL1XR1 | transducin beta like 1 X-linked receptor 1 | ![]() |
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2 | 2 | ||||||
MIRT467128 | SRGAP1 | SLIT-ROBO Rho GTPase activating protein 1 | ![]() |
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2 | 8 | ||||||
MIRT468091 | SHCBP1 | SHC binding and spindle associated 1 | ![]() |
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2 | 2 | ||||||
MIRT469630 | RAD21 | RAD21 cohesin complex component | ![]() |
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2 | 6 | ||||||
MIRT471097 | PIK3C2B | phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta | ![]() |
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2 | 2 | ||||||
MIRT472704 | MYBL1 | MYB proto-oncogene like 1 | ![]() |
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2 | 2 | ||||||
MIRT472830 | MTMR10 | myotubularin related protein 10 | ![]() |
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2 | 2 | ||||||
MIRT472872 | MTHFD2 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase | ![]() |
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2 | 2 | ||||||
MIRT472895 | MTDH | metadherin | ![]() |
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2 | 2 | ||||||
MIRT473728 | MAPK1 | mitogen-activated protein kinase 1 | ![]() |
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2 | 2 | ||||||
MIRT473859 | MAP2K4 | mitogen-activated protein kinase kinase 4 | ![]() |
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2 | 2 | ||||||
MIRT474047 | LONRF1 | LON peptidase N-terminal domain and ring finger 1 | ![]() |
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2 | 2 | ||||||
MIRT474297 | LAMC1 | laminin subunit gamma 1 | ![]() |
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2 | 2 | ||||||
MIRT474658 | KLF13 | Kruppel like factor 13 | ![]() |
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2 | 2 | ||||||
MIRT475234 | IKZF3 | IKAROS family zinc finger 3 | ![]() |
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2 | 2 | ||||||
MIRT475500 | HSP90B1 | heat shock protein 90 beta family member 1 | ![]() |
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2 | 2 | ||||||
MIRT475742 | HERPUD1 | homocysteine inducible ER protein with ubiquitin like domain 1 | ![]() |
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2 | 4 | ||||||
MIRT475793 | HDGF | heparin binding growth factor | ![]() |
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2 | 2 | ||||||
MIRT477254 | ERGIC2 | ERGIC and golgi 2 | ![]() |
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2 | 2 | ||||||
MIRT478228 | DDX52 | DExD-box helicase 52 | ![]() |
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2 | 2 | ||||||
MIRT478393 | DCTN5 | dynactin subunit 5 | ![]() |
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2 | 2 | ||||||
MIRT478754 | CS | citrate synthase | ![]() |
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2 | 2 | ||||||
MIRT478827 | CRKL | CRK like proto-oncogene, adaptor protein | ![]() |
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2 | 4 | ||||||
MIRT480234 | C9orf41 | carnosine N-methyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT480597 | BTRC | beta-transducin repeat containing E3 ubiquitin protein ligase | ![]() |
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2 | 2 | ||||||
MIRT484121 | C14orf142 | GON7, KEOPS complex subunit homolog | ![]() |
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2 | 2 | ||||||
MIRT484689 | PACSIN1 | protein kinase C and casein kinase substrate in neurons 1 | ![]() |
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2 | 2 | ||||||
MIRT486331 | C11orf54 | chromosome 11 open reading frame 54 | ![]() |
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2 | 4 | ||||||
MIRT488599 | FAM3C | family with sequence similarity 3 member C | ![]() |
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2 | 8 | ||||||
MIRT488833 | MRRF | mitochondrial ribosome recycling factor | ![]() |
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2 | 2 | ||||||
MIRT492523 | RAB15 | RAB15, member RAS oncogene family | ![]() |
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2 | 4 | ||||||
MIRT493632 | HIC2 | HIC ZBTB transcriptional repressor 2 | ![]() |
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2 | 2 | ||||||
MIRT500026 | ABCF2 | ATP binding cassette subfamily F member 2 | ![]() |
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2 | 8 | ||||||
MIRT501075 | SMAD7 | SMAD family member 7 | ![]() |
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2 | 8 | ||||||
MIRT503094 | BTG2 | BTG anti-proliferation factor 2 | ![]() |
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2 | 4 | ||||||
MIRT503336 | MMAB | methylmalonic aciduria (cobalamin deficiency) cblB type | ![]() |
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2 | 2 | ||||||
MIRT505465 | STMN1 | stathmin 1 | ![]() |
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2 | 4 | ||||||
MIRT505726 | SERTAD3 | SERTA domain containing 3 | ![]() |
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2 | 4 | ||||||
MIRT509333 | MS4A4A | membrane spanning 4-domains A4A | ![]() |
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2 | 2 | ||||||
MIRT509978 | KCNMB1 | potassium calcium-activated channel subfamily M regulatory beta subunit 1 | ![]() |
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2 | 4 | ||||||
MIRT513068 | CHST6 | carbohydrate sulfotransferase 6 | ![]() |
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2 | 2 | ||||||
MIRT513446 | EMP1 | epithelial membrane protein 1 | ![]() |
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2 | 6 | ||||||
MIRT513736 | PSD3 | pleckstrin and Sec7 domain containing 3 | ![]() |
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2 | 4 | ||||||
MIRT513996 | CENPQ | centromere protein Q | ![]() |
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2 | 4 | ||||||
MIRT516538 | MIXL1 | Mix paired-like homeobox | ![]() |
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2 | 2 | ||||||
MIRT517606 | SAV1 | salvador family WW domain containing protein 1 | ![]() |
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2 | 2 | ||||||
MIRT518064 | CEP89 | centrosomal protein 89 | ![]() |
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2 | 2 | ||||||
MIRT518119 | RNMTL1 | mitochondrial rRNA methyltransferase 3 | ![]() |
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2 | 2 | ||||||
MIRT518325 | WDR92 | WD repeat domain 92 | ![]() |
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2 | 2 | ||||||
MIRT519048 | ABCB11 | ATP binding cassette subfamily B member 11 | ![]() |
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2 | 2 | ||||||
MIRT520972 | SPPL2A | signal peptide peptidase like 2A | ![]() |
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2 | 4 | ||||||
MIRT521359 | RPL35A | ribosomal protein L35a | ![]() |
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2 | 2 | ||||||
MIRT523359 | GTF3C6 | general transcription factor IIIC subunit 6 | ![]() |
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2 | 2 | ||||||
MIRT523801 | FAM63A | MINDY lysine 48 deubiquitinase 1 | ![]() |
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2 | 2 | ||||||
MIRT524622 | C7orf73 | short transmembrane mitochondrial protein 1 | ![]() |
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2 | 2 | ||||||
MIRT525550 | PHB2 | prohibitin 2 | ![]() |
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2 | 4 | ||||||
MIRT529709 | ZBTB49 | zinc finger and BTB domain containing 49 | ![]() |
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2 | 2 | ||||||
MIRT531605 | PLEKHA6 | pleckstrin homology domain containing A6 | ![]() |
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2 | 2 | ||||||
MIRT532387 | UMPS | uridine monophosphate synthetase | ![]() |
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2 | 2 | ||||||
MIRT534468 | SCD | stearoyl-CoA desaturase | ![]() |
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2 | 4 | ||||||
MIRT537546 | ETNK1 | ethanolamine kinase 1 | ![]() |
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2 | 2 | ||||||
MIRT541619 | C11orf31 | selenoprotein H | ![]() |
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2 | 2 | ||||||
MIRT548380 | ENPP5 | ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) | ![]() |
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2 | 4 | ||||||
MIRT549523 | HDDC2 | HD domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT549774 | SOD2 | superoxide dismutase 2 | ![]() |
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2 | 2 | ||||||
MIRT550578 | SLC2A5 | solute carrier family 2 member 5 | ![]() |
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2 | 2 | ||||||
MIRT551498 | CENPN | centromere protein N | ![]() |
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2 | 4 | ||||||
MIRT552301 | ITGA3 | integrin subunit alpha 3 | ![]() |
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2 | 2 | ||||||
MIRT555400 | PPM1L | protein phosphatase, Mg2+/Mn2+ dependent 1L | ![]() |
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2 | 2 | ||||||
MIRT556399 | LUC7L | LUC7 like | ![]() |
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2 | 2 | ||||||
MIRT557047 | HOXB3 | homeobox B3 | ![]() |
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2 | 2 | ||||||
MIRT558072 | ERO1L | endoplasmic reticulum oxidoreductase 1 alpha | ![]() |
1 | 2 | |||||||
MIRT559659 | AHCYL2 | adenosylhomocysteinase like 2 | ![]() |
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2 | 2 | ||||||
MIRT561239 | ZNF354B | zinc finger protein 354B | ![]() |
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2 | 2 | ||||||
MIRT566899 | LRIG2 | leucine rich repeats and immunoglobulin like domains 2 | ![]() |
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2 | 2 | ||||||
MIRT568786 | FAM120B | family with sequence similarity 120B | ![]() |
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2 | 2 | ||||||
MIRT574014 | MRPL12 | mitochondrial ribosomal protein L12 | ![]() |
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2 | 2 | ||||||
MIRT574885 | Dnajc6 | DnaJ heat shock protein family (Hsp40) member C6 | ![]() |
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2 | 2 | ||||||
MIRT575243 | Serping1 | serine (or cysteine) peptidase inhibitor, clade G, member 1 | ![]() |
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2 | 2 | ||||||
MIRT576194 | Vsig2 | V-set and immunoglobulin domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT576309 | Acbd7 | acyl-Coenzyme A binding domain containing 7 | ![]() |
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2 | 2 | ||||||
MIRT576484 | Lhx4 | LIM homeobox protein 4 | ![]() |
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2 | 3 | ||||||
MIRT576646 | Mill2 | MHC I like leukocyte 2 | ![]() |
1 | 1 | |||||||
MIRT576708 | Kras | Kirsten rat sarcoma viral oncogene homolog | ![]() |
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2 | 2 | ||||||
MIRT576855 | Socs6 | suppressor of cytokine signaling 6 | ![]() |
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2 | 2 | ||||||
MIRT576950 | Aldoa | aldolase A, fructose-bisphosphate | ![]() |
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2 | 2 | ||||||
MIRT617133 | ZNF556 | zinc finger protein 556 | ![]() |
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2 | 4 | ||||||
MIRT617928 | ZNF783 | zinc finger family member 783 | ![]() |
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2 | 2 | ||||||
MIRT618981 | MRPS16 | mitochondrial ribosomal protein S16 | ![]() |
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2 | 2 | ||||||
MIRT621100 | SIX3 | SIX homeobox 3 | ![]() |
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2 | 2 | ||||||
MIRT624537 | BROX | BRO1 domain and CAAX motif containing | ![]() |
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2 | 2 | ||||||
MIRT625663 | C2orf48 | chromosome 2 open reading frame 48 | ![]() |
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2 | 2 | ||||||
MIRT627059 | DCTN6 | dynactin subunit 6 | ![]() |
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2 | 2 | ||||||
MIRT628319 | CLPB | ClpB homolog, mitochondrial AAA ATPase chaperonin | ![]() |
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2 | 2 | ||||||
MIRT630859 | ENTPD5 | ectonucleoside triphosphate diphosphohydrolase 5 | ![]() |
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2 | 2 | ||||||
MIRT632295 | TMEM65 | transmembrane protein 65 | ![]() |
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2 | 2 | ||||||
MIRT634115 | ZNF207 | zinc finger protein 207 | ![]() |
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2 | 2 | ||||||
MIRT634736 | CYP20A1 | cytochrome P450 family 20 subfamily A member 1 | ![]() |
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2 | 2 | ||||||
MIRT635655 | NDST3 | N-deacetylase and N-sulfotransferase 3 | ![]() |
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2 | 2 | ||||||
MIRT635772 | PDCL3 | phosducin like 3 | ![]() |
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2 | 2 | ||||||
MIRT635911 | LILRA2 | leukocyte immunoglobulin like receptor A2 | ![]() |
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2 | 2 | ||||||
MIRT636365 | OGFRL1 | opioid growth factor receptor like 1 | ![]() |
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2 | 4 | ||||||
MIRT637251 | GLRX2 | glutaredoxin 2 | ![]() |
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2 | 2 | ||||||
MIRT638705 | FZD4 | frizzled class receptor 4 | ![]() |
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2 | 2 | ||||||
MIRT639640 | PREX2 | phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 | ![]() |
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2 | 2 | ||||||
MIRT639676 | PPEF2 | protein phosphatase with EF-hand domain 2 | ![]() |
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2 | 4 | ||||||
MIRT642267 | SMIM17 | small integral membrane protein 17 | ![]() |
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2 | 2 | ||||||
MIRT642372 | ZNF581 | zinc finger protein 581 | ![]() |
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2 | 2 | ||||||
MIRT643545 | SLC25A17 | solute carrier family 25 member 17 | ![]() |
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2 | 2 | ||||||
MIRT647994 | PDE12 | phosphodiesterase 12 | ![]() |
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2 | 2 | ||||||
MIRT649094 | NOM1 | nucleolar protein with MIF4G domain 1 | ![]() |
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2 | 2 | ||||||
MIRT650993 | ZNF770 | zinc finger protein 770 | ![]() |
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2 | 2 | ||||||
MIRT651956 | UBE2N | ubiquitin conjugating enzyme E2 N | ![]() |
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2 | 2 | ||||||
MIRT652977 | SUN2 | Sad1 and UNC84 domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT654389 | RBM12B | RNA binding motif protein 12B | ![]() |
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2 | 2 | ||||||
MIRT655637 | OLFML2A | olfactomedin like 2A | ![]() |
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2 | 2 | ||||||
MIRT655729 | NRXN3 | neurexin 3 | ![]() |
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2 | 2 | ||||||
MIRT658171 | FCHSD1 | FCH and double SH3 domains 1 | ![]() |
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2 | 2 | ||||||
MIRT660937 | ACOX1 | acyl-CoA oxidase 1 | ![]() |
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2 | 2 | ||||||
MIRT662112 | CERKL | ceramide kinase like | ![]() |
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2 | 2 | ||||||
MIRT662302 | MPV17L | MPV17 mitochondrial inner membrane protein like | ![]() |
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2 | 2 | ||||||
MIRT662993 | TMEM59 | transmembrane protein 59 | ![]() |
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2 | 2 | ||||||
MIRT663071 | SFR1 | SWI5 dependent homologous recombination repair protein 1 | ![]() |
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2 | 2 | ||||||
MIRT663704 | ABHD17B | abhydrolase domain containing 17B | ![]() |
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2 | 2 | ||||||
MIRT663864 | MUC20 | mucin 20, cell surface associated | ![]() |
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2 | 2 | ||||||
MIRT665185 | HAUS5 | HAUS augmin like complex subunit 5 | ![]() |
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2 | 4 | ||||||
MIRT665402 | WEE1 | WEE1 G2 checkpoint kinase | ![]() |
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2 | 2 | ||||||
MIRT665688 | TNPO3 | transportin 3 | ![]() |
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2 | 2 | ||||||
MIRT665795 | TMEM170A | transmembrane protein 170A | ![]() |
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2 | 2 | ||||||
MIRT665847 | TIAL1 | TIA1 cytotoxic granule associated RNA binding protein like 1 | ![]() |
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2 | 2 | ||||||
MIRT666999 | PDPN | podoplanin | ![]() |
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2 | 2 | ||||||
MIRT667598 | LIPC | lipase C, hepatic type | ![]() |
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2 | 2 | ||||||
MIRT668576 | ELMSAN1 | ELM2 and Myb/SANT domain containing 1 | ![]() |
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2 | 4 | ||||||
MIRT670960 | UGGT1 | UDP-glucose glycoprotein glucosyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT671187 | ZNF891 | zinc finger protein 891 | ![]() |
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2 | 2 | ||||||
MIRT671739 | ZNF451 | zinc finger protein 451 | ![]() |
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2 | 2 | ||||||
MIRT672745 | ZNF585B | zinc finger protein 585B | ![]() |
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2 | 4 | ||||||
MIRT673446 | ZNF583 | zinc finger protein 583 | ![]() |
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2 | 2 | ||||||
MIRT679843 | GPR75 | G protein-coupled receptor 75 | ![]() |
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2 | 2 | ||||||
MIRT680556 | ZNF584 | zinc finger protein 584 | ![]() |
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2 | 2 | ||||||
MIRT680661 | C1orf210 | chromosome 1 open reading frame 210 | ![]() |
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2 | 2 | ||||||
MIRT681285 | RFC2 | replication factor C subunit 2 | ![]() |
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2 | 2 | ||||||
MIRT683264 | ZNF329 | zinc finger protein 329 | ![]() |
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2 | 2 | ||||||
MIRT684519 | C1orf174 | chromosome 1 open reading frame 174 | ![]() |
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2 | 2 | ||||||
MIRT685065 | GEMIN4 | gem nuclear organelle associated protein 4 | ![]() |
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2 | 2 | ||||||
MIRT685157 | DTWD2 | DTW domain containing 2 | ![]() |
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2 | 2 | ||||||
MIRT685168 | ERCC1 | ERCC excision repair 1, endonuclease non-catalytic subunit | ![]() |
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2 | 2 | ||||||
MIRT685470 | CACNG8 | calcium voltage-gated channel auxiliary subunit gamma 8 | ![]() |
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2 | 2 | ||||||
MIRT686001 | NEK4 | NIMA related kinase 4 | ![]() |
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2 | 2 | ||||||
MIRT687027 | RNF24 | ring finger protein 24 | ![]() |
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2 | 2 | ||||||
MIRT687543 | MOB1B | MOB kinase activator 1B | ![]() |
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2 | 2 | ||||||
MIRT687592 | MANEAL | mannosidase endo-alpha like | ![]() |
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2 | 2 | ||||||
MIRT687753 | KIAA1328 | KIAA1328 | ![]() |
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2 | 2 | ||||||
MIRT688050 | GLUL | glutamate-ammonia ligase | ![]() |
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2 | 2 | ||||||
MIRT688374 | ENPP1 | ectonucleotide pyrophosphatase/phosphodiesterase 1 | ![]() |
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2 | 2 | ||||||
MIRT688802 | CBFA2T3 | CBFA2/RUNX1 translocation partner 3 | ![]() |
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2 | 2 | ||||||
MIRT688957 | ATXN3 | ataxin 3 | ![]() |
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2 | 2 | ||||||
MIRT689281 | C5AR2 | complement component 5a receptor 2 | ![]() |
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2 | 2 | ||||||
MIRT689988 | NNMT | nicotinamide N-methyltransferase | ![]() |
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2 | 2 | ||||||
MIRT689997 | MMP17 | matrix metallopeptidase 17 | ![]() |
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2 | 2 | ||||||
MIRT690014 | LUZP2 | leucine zipper protein 2 | ![]() |
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2 | 2 | ||||||
MIRT690161 | ELP3 | elongator acetyltransferase complex subunit 3 | ![]() |
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2 | 2 | ||||||
MIRT690379 | ZSWIM7 | zinc finger SWIM-type containing 7 | ![]() |
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2 | 2 | ||||||
MIRT690563 | MICA | MHC class I polypeptide-related sequence A | ![]() |
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2 | 2 | ||||||
MIRT691891 | EVC | EvC ciliary complex subunit 1 | ![]() |
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2 | 2 | ||||||
MIRT693107 | SCNM1 | sodium channel modifier 1 | ![]() |
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2 | 2 | ||||||
MIRT693832 | ZFP64 | ZFP64 zinc finger protein | ![]() |
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2 | 2 | ||||||
MIRT694105 | ZNF446 | zinc finger protein 446 | ![]() |
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2 | 2 | ||||||
MIRT694179 | ZNF486 | zinc finger protein 486 | ![]() |
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2 | 2 | ||||||
MIRT694475 | LRTOMT | leucine rich transmembrane and O-methyltransferase domain containing | ![]() |
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2 | 2 | ||||||
MIRT694998 | GGA2 | golgi associated, gamma adaptin ear containing, ARF binding protein 2 | ![]() |
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2 | 2 | ||||||
MIRT695031 | ALG10B | ALG10B, alpha-1,2-glucosyltransferase | ![]() |
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2 | 2 | ||||||
MIRT695163 | TCTN2 | tectonic family member 2 | ![]() |
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2 | 2 | ||||||
MIRT695525 | SLC25A34 | solute carrier family 25 member 34 | ![]() |
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2 | 2 | ||||||
MIRT696067 | ZNF264 | zinc finger protein 264 | ![]() |
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2 | 2 | ||||||
MIRT696616 | CRIPT | CXXC repeat containing interactor of PDZ3 domain | ![]() |
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2 | 2 | ||||||
MIRT696661 | AGXT2 | alanine--glyoxylate aminotransferase 2 | ![]() |
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2 | 2 | ||||||
MIRT696705 | PNPO | pyridoxamine 5'-phosphate oxidase | ![]() |
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2 | 2 | ||||||
MIRT697173 | INMT | indolethylamine N-methyltransferase | ![]() |
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2 | 2 | ||||||
MIRT697303 | ZNF652 | zinc finger protein 652 | ![]() |
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2 | 2 | ||||||
MIRT697491 | ZBTB8B | zinc finger and BTB domain containing 8B | ![]() |
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2 | 2 | ||||||
MIRT698657 | TERF2 | telomeric repeat binding factor 2 | ![]() |
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2 | 2 | ||||||
MIRT699042 | SOAT1 | sterol O-acyltransferase 1 | ![]() |
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2 | 2 | ||||||
MIRT699185 | SLX4IP | SLX4 interacting protein | ![]() |
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2 | 2 | ||||||
MIRT699598 | SHOC2 | SHOC2, leucine rich repeat scaffold protein | ![]() |
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2 | 2 | ||||||
MIRT700150 | RNF115 | ring finger protein 115 | ![]() |
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2 | 2 | ||||||
MIRT700720 | PNO1 | partner of NOB1 homolog | ![]() |
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2 | 2 | ||||||
MIRT700870 | PER2 | period circadian clock 2 | ![]() |
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2 | 2 | ||||||
MIRT700912 | PDXK | pyridoxal kinase | ![]() |
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2 | 2 | ||||||
MIRT701095 | PAPOLG | poly(A) polymerase gamma | ![]() |
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2 | 2 | ||||||
MIRT701194 | OTUD3 | OTU deubiquitinase 3 | ![]() |
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2 | 2 | ||||||
MIRT702203 | LPP | LIM domain containing preferred translocation partner in lipoma | ![]() |
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2 | 2 | ||||||
MIRT702272 | LHX4 | LIM homeobox 4 | ![]() |
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2 | 3 | ||||||
MIRT703125 | GPRC5A | G protein-coupled receptor class C group 5 member A | ![]() |
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2 | 2 | ||||||
MIRT703252 | GNS | glucosamine (N-acetyl)-6-sulfatase | ![]() |
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2 | 2 | ||||||
MIRT703262 | GNL3L | G protein nucleolar 3 like | ![]() |
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2 | 2 | ||||||
MIRT703440 | FYTTD1 | forty-two-three domain containing 1 | ![]() |
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2 | 2 | ||||||
MIRT704321 | DCUN1D5 | defective in cullin neddylation 1 domain containing 5 | ![]() |
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2 | 2 | ||||||
MIRT704393 | CTSS | cathepsin S | ![]() |
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2 | 2 | ||||||
MIRT704483 | CPT1A | carnitine palmitoyltransferase 1A | ![]() |
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2 | 2 | ||||||
MIRT704880 | CCSER2 | coiled-coil serine rich protein 2 | ![]() |
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2 | 2 | ||||||
MIRT704926 | CCDC36 | coiled-coil domain containing 36 | ![]() |
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2 | 2 | ||||||
MIRT705175 | BZW1 | basic leucine zipper and W2 domains 1 | ![]() |
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2 | 2 | ||||||
MIRT706561 | EIF2AK2 | eukaryotic translation initiation factor 2 alpha kinase 2 | ![]() |
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2 | 2 | ||||||
MIRT707048 | TRPV2 | transient receptor potential cation channel subfamily V member 2 | ![]() |
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2 | 2 | ||||||
MIRT711497 | PGD | phosphogluconate dehydrogenase | ![]() |
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2 | 2 | ||||||
MIRT716644 | EPGN | epithelial mitogen | ![]() |
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2 | 2 | ||||||
MIRT720083 | TNRC6B | trinucleotide repeat containing 6B | ![]() |
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2 | 2 | ||||||
MIRT722288 | PMPCA | peptidase, mitochondrial processing alpha subunit | ![]() |
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2 | 2 | ||||||
MIRT725468 | GRAP2 | GRB2-related adaptor protein 2 | ![]() |
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2 | 2 |
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