miRTarBase - #MIRT502024


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pre-miRNA Information
pre-miRNA hsa-mir-3164   
Genomic Coordinates chr11: 69083176 - 69083258
Description Homo sapiens miR-3164 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3164
Sequence 10| UGUGACUUUAAGGGAAAUGGCG |31
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31563669 1 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs980934457 7 dbSNP
rs1481631209 9 dbSNP
rs926392675 14 dbSNP
rs1351752919 15 dbSNP
rs1196636270 17 dbSNP
rs1250002909 18 dbSNP
rs939035438 21 dbSNP
rs991811143 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LRIG2   
Synonyms LIG-2, LIG2, UFS2
Description leucine rich repeats and immunoglobulin like domains 2
Transcript NM_014813   
Expression
Putative miRNA Targets on LRIG2
3'UTR of LRIG2
(miRNA target sites are highlighted)		 
>LRIG2|NM_014813|3'UTR
   1 AACTCACTTCAGGATGAAATCTGGGCAGAGACTTATTAATTAATTTTGCATTTACTACCTCAGAGCTCAGAAGAAACTCC
  81 GAAGTCAGCATTTGCTTTACTCTTTCTTTATGATTGCATCTGACCGCACCAAGGTGGGCCATGCGTTGTTTGGTCTTATA
 161 CCTGATGAAGAAATGGCAACAGCTGACAGAAATGGGTACAGCTCATCAAAAATGTGCAGCACCGGCAGAGGGAAGATACG
 241 GGGCAAATGTGCTTCCTGATGCTTCCATGGGGATGTGCCCTGGTGTGCATCTGCTTGTCAGGAAGAGTCACATTGCTGCT
 321 TAACATGCTGGATTGCCCTAGTCTTCAGAATGGTCCTGAGAAAACATCACTACTTCGATGTTCTACTTTGCTTTCCAAGG
 401 AGCAAAAATAACTTTGGAGCCTTCTGGGAAGTGTGCCTGGGATTCTTCAGTGGTTTCAGGCAGATAGTTGAGACTGGGGC
 481 TTTGATATTCAAGGTCTTTGGCAAGAATCCCAGGCTTGACCAACTGGTACCAGGTCAAAGATTTTTGTATTCTTGTGAAT
 561 TTTTTTTTTTGTCCCTATTGCCCAGGGATGTCATTGTAAATATATGTGCATTTATAAATAATTTTTGTATTCATTGACCA
 641 TATGTGTTGGCTGCAATGTAAATATTTTTGATATGCCAAAATTATATGTAATATCCAGTTATAATATTGACAAGTAGCTT
 721 CTCAGATCACAGATTTTAAATAACTCAATTTAGTGAGATCTAAAAATTTTATTTAAAGTATAAAAACTGTGGCTCACACC
 801 TGTAATCCCAGCATTTTGAGAGGCTAAGGTGGGAGGATTGCTTGAGGCCAGGAATTTGAGACCAGGCTGGGCAACATGGT
 881 GAGACCCTGTGTCTGCAAAAAAATAAATTAAAAAAATAGGTGGACATTGTGGCATGCTGCTGTAGTCCTAGCTACTTGGG
 961 AGGCTGAGGTGGGAGGGTCACTTGAGCCCGGGAAATCAAGGCTGCAGTGAGCTGTGTGAAGCCACTGCATCCCAGCCTGG
1041 GTGACAGAGTGAGGCCCTGGCTCAAAAGTAAAATAAATAAATAAAAAGTTTTAAAAACTTAAAAAAAAAAAAAAAAAAAA
1121 AAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gcgGUAAAGGGA-A-----UUUCAGUGu 5'
             ||| | |:| |     |:|||||| 
Target 5' gtgCATCTGCTTGTCAGGAAGAGTCACa 3'
 285 - 312 135.00 -14.90
2 
miRNA  3' gcgguaaAGGGAAUUUCAGUgu 5'
                 |||   :||||||  
Target 5' aagaaacTCC---GAAGTCAgc 3'
 71 - 89 124.00 -7.60
3 
miRNA  3' gcgGUAAAGGGA---AUUUCAGUGu 5'
             || |   ||   |:||| ||| 
Target 5' ctgCAGTGAGCTGTGTGAAGCCACt 3'
 1002 - 1026 115.00 -6.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30114768 43 COSMIC
COSN30102148 82 COSMIC
COSN30528902 82 COSMIC
COSN31562361 124 COSMIC
COSN30114988 146 COSMIC
COSN31960283 205 COSMIC
COSN29928272 244 COSMIC
COSN16130531 377 COSMIC
COSN31582382 420 COSMIC
COSN31588201 450 COSMIC
COSN16128731 553 COSMIC
COSN1087228 571 COSMIC
COSN27206449 571 COSMIC
COSN22897708 904 COSMIC
COSN5730754 1575 COSMIC
COSN21402577 1734 COSMIC
COSN5999054 2375 COSMIC
COSN7172577 2408 COSMIC
COSN27673877 2540 COSMIC
COSN1087229 2776 COSMIC
COSN8887398 2828 COSMIC
COSN26762511 2872 COSMIC
COSN1401846 2973 COSMIC
COSN15023275 2990 COSMIC
COSN7172578 3257 COSMIC
COSN24332293 3469 COSMIC
COSN28943119 3482 COSMIC
COSN5353083 3498 COSMIC
COSN22080938 3591 COSMIC
COSN1401847 3868 COSMIC
COSN7172579 3963 COSMIC
COSN32123220 4815 COSMIC
COSN16407208 5071 COSMIC
COSN19552267 5351 COSMIC
COSN23366423 5450 COSMIC
COSN24763670 5809 COSMIC
COSN15903877 6192 COSMIC
COSN24933121 6526 COSMIC
COSN4743446 6771 COSMIC
COSN20842312 6855 COSMIC
COSN15282578 6948 COSMIC
COSN23270584 7364 COSMIC
COSN30654218 7494 COSMIC
COSN30723679 7495 COSMIC
COSN30642756 7575 COSMIC
COSN1087230 7594 COSMIC
COSN15665504 7734 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs773635499 13 dbSNP
rs1374431305 22 dbSNP
rs761081245 24 dbSNP
rs77848874 25 dbSNP
rs780244918 27 dbSNP
rs927853047 27 dbSNP
rs1230523517 29 dbSNP
rs754074916 31 dbSNP
rs747384728 35 dbSNP
rs755768387 36 dbSNP
rs1240366907 37 dbSNP
rs759843208 39 dbSNP
rs915029036 40 dbSNP
rs765613010 44 dbSNP
rs752818271 49 dbSNP
rs779396501 51 dbSNP
rs1369235896 58 dbSNP
rs1055198235 71 dbSNP
rs1192185018 75 dbSNP
rs916255351 76 dbSNP
rs746341683 81 dbSNP
rs947536989 85 dbSNP
rs1394805797 92 dbSNP
rs1435897234 94 dbSNP
rs1250901329 100 dbSNP
rs1176398510 101 dbSNP
rs1482071711 103 dbSNP
rs946429022 106 dbSNP
rs1043473922 113 dbSNP
rs942910744 116 dbSNP
rs574537774 118 dbSNP
rs1265087533 119 dbSNP
rs376195015 120 dbSNP
rs902295370 124 dbSNP
rs999632877 125 dbSNP
rs533921788 126 dbSNP
rs759016056 127 dbSNP
rs190780458 129 dbSNP
rs1317258062 130 dbSNP
rs576902980 139 dbSNP
rs1029375931 142 dbSNP
rs1409571699 143 dbSNP
rs952094079 145 dbSNP
rs143701113 146 dbSNP
rs1047165155 165 dbSNP
rs1006289547 170 dbSNP
rs1161111221 174 dbSNP
rs1455076944 178 dbSNP
rs1015000658 180 dbSNP
rs1364015566 183 dbSNP
rs1434273540 192 dbSNP
rs962152341 195 dbSNP
rs148144342 200 dbSNP
rs1199973773 201 dbSNP
rs1490537381 203 dbSNP
rs573401640 204 dbSNP
rs1208127813 205 dbSNP
rs1353155327 209 dbSNP
rs867304519 215 dbSNP
rs1228192596 216 dbSNP
rs990763394 223 dbSNP
rs916207405 224 dbSNP
rs956568481 225 dbSNP
rs987798311 227 dbSNP
rs540504768 240 dbSNP
rs1204599351 241 dbSNP
rs1268807218 251 dbSNP
rs1466439451 252 dbSNP
rs1043401328 260 dbSNP
rs1211994765 266 dbSNP
rs923684788 269 dbSNP
rs182630453 276 dbSNP
rs1431080331 278 dbSNP
rs1434112640 278 dbSNP
rs1176866594 279 dbSNP
rs985849318 291 dbSNP
rs188025838 303 dbSNP
rs1375826338 304 dbSNP
rs1196915840 308 dbSNP
rs1040479630 313 dbSNP
rs1262736226 317 dbSNP
rs1208276522 319 dbSNP
rs768362114 320 dbSNP
rs1201717030 326 dbSNP
rs902019185 337 dbSNP
rs996803544 347 dbSNP
rs1344973664 354 dbSNP
rs1050718691 360 dbSNP
rs192847776 378 dbSNP
rs1006215948 386 dbSNP
rs1014969515 387 dbSNP
rs922907665 390 dbSNP
rs1432520664 404 dbSNP
rs929948436 411 dbSNP
rs1047072467 415 dbSNP
rs1413674520 423 dbSNP
rs962120557 428 dbSNP
rs1169541346 429 dbSNP
rs1458505575 431 dbSNP
rs141929843 438 dbSNP
rs1187992383 446 dbSNP
rs1323399471 451 dbSNP
rs941393233 465 dbSNP
rs1002962501 467 dbSNP
rs751759740 468 dbSNP
rs1204768196 474 dbSNP
rs1442163122 474 dbSNP
rs1277123533 475 dbSNP
rs184624204 480 dbSNP
rs960588792 483 dbSNP
rs1296316482 489 dbSNP
rs1225500683 508 dbSNP
rs1384602559 511 dbSNP
rs1315247529 512 dbSNP
rs991081590 514 dbSNP
rs1330831522 537 dbSNP
rs1338418682 537 dbSNP
rs564192357 546 dbSNP
rs750038369 556 dbSNP
rs74885682 559 dbSNP
rs1003415087 560 dbSNP
rs1035338789 560 dbSNP
rs1369873088 560 dbSNP
rs1427880226 571 dbSNP
rs1387349781 574 dbSNP
rs1333938624 575 dbSNP
rs373622104 577 dbSNP
rs892357124 578 dbSNP
rs747901574 581 dbSNP
rs1236143753 584 dbSNP
rs1238178451 587 dbSNP
rs1438937747 588 dbSNP
rs967972392 596 dbSNP
rs1289079652 598 dbSNP
rs1009450813 604 dbSNP
rs979064082 619 dbSNP
rs1202431362 628 dbSNP
rs533009986 641 dbSNP
rs769462650 642 dbSNP
rs967688401 645 dbSNP
rs935046871 650 dbSNP
rs985839338 656 dbSNP
rs1489037464 664 dbSNP
rs1376504619 665 dbSNP
rs975871835 666 dbSNP
rs773106429 669 dbSNP
rs1211968468 674 dbSNP
rs1442626290 678 dbSNP
rs1349850445 682 dbSNP
rs923411525 686 dbSNP
rs552505084 687 dbSNP
rs1408083195 691 dbSNP
rs1051060575 692 dbSNP
rs1367465196 710 dbSNP
rs888029620 716 dbSNP
rs1405058044 720 dbSNP
rs1411856234 721 dbSNP
rs1160700670 723 dbSNP
rs1473092646 725 dbSNP
rs976970255 728 dbSNP
rs1180572104 731 dbSNP
rs942301228 733 dbSNP
rs1036326945 737 dbSNP
rs762702883 742 dbSNP
rs922779472 749 dbSNP
rs1183465843 754 dbSNP
rs187448647 759 dbSNP
rs1319597490 762 dbSNP
rs1473284682 766 dbSNP
rs770878841 767 dbSNP
rs983040875 776 dbSNP
rs1286394171 780 dbSNP
rs1035758047 787 dbSNP
rs1225333626 788 dbSNP
rs909846075 796 dbSNP
rs1367509097 797 dbSNP
rs1294233652 803 dbSNP
rs531807109 809 dbSNP
rs765943575 818 dbSNP
rs941382018 830 dbSNP
rs1320485695 833 dbSNP
rs1012073106 834 dbSNP
rs1045167577 839 dbSNP
rs905307207 848 dbSNP
rs1295091747 865 dbSNP
rs1023928963 868 dbSNP
rs1393991012 869 dbSNP
rs775491995 870 dbSNP
rs760749683 871 dbSNP
rs1190180801 872 dbSNP
rs1308552955 876 dbSNP
rs1243519571 877 dbSNP
rs967899205 886 dbSNP
rs1412987603 897 dbSNP
rs939165570 897 dbSNP
rs1266084952 899 dbSNP
rs1225084290 910 dbSNP
rs1324250927 912 dbSNP
rs764301689 929 dbSNP
rs1300441458 935 dbSNP
rs979324496 943 dbSNP
rs1030597295 946 dbSNP
rs192625547 949 dbSNP
rs1322589117 951 dbSNP
rs1272162623 953 dbSNP
rs568397442 957 dbSNP
rs976177272 958 dbSNP
rs1009398468 963 dbSNP
rs1319013070 964 dbSNP
rs1471148550 967 dbSNP
rs1360273118 970 dbSNP
rs1043663200 971 dbSNP
rs12143835 974 dbSNP
rs1421094393 977 dbSNP
rs1339073062 982 dbSNP
rs1448541977 983 dbSNP
rs1206585150 987 dbSNP
rs1245790572 990 dbSNP
rs931760805 990 dbSNP
rs1483779082 991 dbSNP
rs1255342731 993 dbSNP
rs1207866757 996 dbSNP
rs543797663 998 dbSNP
rs1185120912 1011 dbSNP
rs1007208403 1015 dbSNP
rs1017753829 1022 dbSNP
rs201521552 1023 dbSNP
rs986315741 1024 dbSNP
rs1380265807 1025 dbSNP
rs1424041853 1033 dbSNP
rs1166388372 1036 dbSNP
rs1302621156 1039 dbSNP
rs997688185 1041 dbSNP
rs1371194531 1057 dbSNP
rs184874839 1062 dbSNP
rs1428481969 1069 dbSNP
rs1184978104 1071 dbSNP
rs1387967122 1071 dbSNP
rs1169192676 1073 dbSNP
rs1301630953 1079 dbSNP
rs1424187133 1083 dbSNP
rs1372294144 1087 dbSNP
rs778461835 1103 dbSNP
rs1255286897 1104 dbSNP
rs951530212 1106 dbSNP
rs188463414 1110 dbSNP
rs117039516 1114 dbSNP
rs749956 1115 dbSNP
rs750846953 1120 dbSNP
rs180864140 1121 dbSNP
rs1322547758 1125 dbSNP
rs541645241 1131 dbSNP
rs1394630923 1139 dbSNP
rs894557741 1146 dbSNP
rs1277447929 1154 dbSNP
rs1346384015 1156 dbSNP
rs1408691236 1156 dbSNP
rs1210720591 1158 dbSNP
rs555728446 1159 dbSNP
rs758923440 1164 dbSNP
rs374111401 1166 dbSNP
rs1183292725 1174 dbSNP
rs572342628 1179 dbSNP
rs532007848 1180 dbSNP
rs1249794723 1181 dbSNP
rs755741529 1186 dbSNP
rs1488957436 1190 dbSNP
rs939416012 1193 dbSNP
rs1243105119 1198 dbSNP
rs1289535256 1204 dbSNP
rs541043192 1204 dbSNP
rs1056952815 1219 dbSNP
rs1000715453 1220 dbSNP
rs1391735990 1231 dbSNP
rs1030858154 1237 dbSNP
rs956651690 1247 dbSNP
rs184276899 1248 dbSNP
rs1389600520 1259 dbSNP
rs945243808 1259 dbSNP
rs1175195370 1271 dbSNP
rs1030452714 1283 dbSNP
rs532888264 1285 dbSNP
rs1412362942 1289 dbSNP
rs1158141199 1300 dbSNP
rs1471591406 1306 dbSNP
rs1007449045 1307 dbSNP
rs543549291 1310 dbSNP
rs189635263 1328 dbSNP
rs1433800525 1331 dbSNP
rs1287386662 1337 dbSNP
rs181165916 1350 dbSNP
rs1466410534 1353 dbSNP
rs748763951 1353 dbSNP
rs185962883 1354 dbSNP
rs200027446 1355 dbSNP
rs35747502 1355 dbSNP
rs552112086 1355 dbSNP
rs1369148862 1356 dbSNP
rs386368110 1358 dbSNP
rs199581412 1364 dbSNP
rs938971063 1368 dbSNP
rs1026524101 1370 dbSNP
rs951519052 1370 dbSNP
rs1388875884 1379 dbSNP
rs1319697591 1387 dbSNP
rs1455400514 1389 dbSNP
rs1004415565 1390 dbSNP
rs1017182464 1391 dbSNP
rs1478402537 1394 dbSNP
rs1302565930 1398 dbSNP
rs1377194190 1400 dbSNP
rs962934521 1420 dbSNP
rs981436375 1421 dbSNP
rs1211577177 1422 dbSNP
rs1057091804 1430 dbSNP
rs961029322 1441 dbSNP
rs1463796344 1442 dbSNP
rs1281353632 1444 dbSNP
rs754530908 1444 dbSNP
rs1201470508 1447 dbSNP
rs1344911957 1456 dbSNP
rs570755526 1459 dbSNP
rs1229944414 1467 dbSNP
rs1464177787 1474 dbSNP
rs1296364369 1479 dbSNP
rs568434163 1489 dbSNP
rs74986097 1495 dbSNP
rs1452336662 1499 dbSNP
rs1413902050 1504 dbSNP
rs1190603541 1509 dbSNP
rs747732924 1531 dbSNP
rs769523889 1536 dbSNP
rs904639931 1545 dbSNP
rs1431656477 1551 dbSNP
rs1391058306 1577 dbSNP
rs538183043 1581 dbSNP
rs10494149 1587 dbSNP
rs1239640658 1592 dbSNP
rs1188675728 1597 dbSNP
rs866270553 1602 dbSNP
rs1254626806 1604 dbSNP
rs1039366767 1607 dbSNP
rs901508651 1611 dbSNP
rs747133698 1619 dbSNP
rs1342167256 1621 dbSNP
rs10494150 1622 dbSNP
rs1225793545 1623 dbSNP
rs1284605547 1625 dbSNP
rs1358017470 1625 dbSNP
rs1411272252 1626 dbSNP
rs1047462185 1630 dbSNP
rs997846901 1650 dbSNP
rs1029965906 1655 dbSNP
rs768767771 1655 dbSNP
rs1322798175 1657 dbSNP
rs539443518 1660 dbSNP
rs1411750204 1668 dbSNP
rs1371180297 1669 dbSNP
rs139038285 1678 dbSNP
rs1294670892 1680 dbSNP
rs1370400179 1684 dbSNP
rs1408500460 1688 dbSNP
rs1416198097 1695 dbSNP
rs1222514512 1713 dbSNP
rs1285930711 1714 dbSNP
rs1007248177 1725 dbSNP
rs1228701591 1727 dbSNP
rs1016007105 1728 dbSNP
rs1416340748 1728 dbSNP
rs570031189 1729 dbSNP
rs1184888671 1747 dbSNP
rs1483658574 1750 dbSNP
rs963156062 1755 dbSNP
rs972220862 1759 dbSNP
rs1453025092 1761 dbSNP
rs553370385 1766 dbSNP
rs1002455402 1774 dbSNP
rs1353918546 1780 dbSNP
rs1290152035 1782 dbSNP
rs919427688 1783 dbSNP
rs1177979820 1787 dbSNP
rs960285215 1794 dbSNP
rs960725803 1804 dbSNP
rs1440049877 1814 dbSNP
rs1351867185 1815 dbSNP
rs1324371167 1816 dbSNP
rs1405154294 1820 dbSNP
rs72988217 1825 dbSNP
rs992590700 1835 dbSNP
rs1161816615 1836 dbSNP
rs1473226582 1844 dbSNP
rs1411842755 1845 dbSNP
rs1175340991 1857 dbSNP
rs1020929511 1863 dbSNP
rs993500133 1871 dbSNP
rs1161705438 1873 dbSNP
rs966736348 1874 dbSNP
rs1415914922 1877 dbSNP
rs774267841 1880 dbSNP
rs1209089958 1891 dbSNP
rs1328417869 1900 dbSNP
rs1165954466 1902 dbSNP
rs979494528 1903 dbSNP
rs1222145165 1907 dbSNP
rs759531658 1922 dbSNP
rs1275494526 1925 dbSNP
rs796152001 1926 dbSNP
rs1392511857 1929 dbSNP
rs1307957512 1932 dbSNP
rs1043069337 1937 dbSNP
rs1388594403 1946 dbSNP
rs1349404409 1977 dbSNP
rs555567384 2003 dbSNP
rs1157478149 2005 dbSNP
rs1415699585 2006 dbSNP
rs116376840 2007 dbSNP
rs1190118389 2008 dbSNP
rs934786223 2011 dbSNP
rs1052181768 2015 dbSNP
rs892304044 2020 dbSNP
rs1249481611 2027 dbSNP
rs1189011378 2030 dbSNP
rs1353861872 2033 dbSNP
rs1464218253 2036 dbSNP
rs561770413 2039 dbSNP
rs932985120 2046 dbSNP
rs1212225189 2047 dbSNP
rs1312691622 2048 dbSNP
rs1279468363 2049 dbSNP
rs1410381077 2056 dbSNP
rs1218694922 2066 dbSNP
rs1290348720 2078 dbSNP
rs1047407591 2081 dbSNP
rs886122214 2083 dbSNP
rs1436287117 2085 dbSNP
rs541280361 2087 dbSNP
rs1287472457 2089 dbSNP
rs377136172 2090 dbSNP
rs190474711 2091 dbSNP
rs1203002795 2096 dbSNP
rs773823412 2109 dbSNP
rs577606746 2111 dbSNP
rs1483446041 2114 dbSNP
rs898663225 2119 dbSNP
rs1168771243 2120 dbSNP
rs1007222625 2125 dbSNP
rs1472598237 2127 dbSNP
rs1033924069 2131 dbSNP
rs1015975501 2134 dbSNP
rs1483564796 2142 dbSNP
rs1236779808 2147 dbSNP
rs776815601 2160 dbSNP
rs896702394 2161 dbSNP
rs898875823 2163 dbSNP
rs1277053572 2165 dbSNP
rs1229487093 2178 dbSNP
rs10494151 2195 dbSNP
rs1026454764 2208 dbSNP
rs960501150 2209 dbSNP
rs966689835 2216 dbSNP
rs1398137311 2220 dbSNP
rs979478070 2224 dbSNP
rs993036398 2226 dbSNP
rs779093857 2227 dbSNP
rs866541822 2230 dbSNP
rs1023626523 2238 dbSNP
rs964557032 2239 dbSNP
rs761672553 2240 dbSNP
rs1446919102 2248 dbSNP
rs1424133629 2262 dbSNP
rs923140188 2266 dbSNP
rs563423133 2271 dbSNP
rs528951926 2275 dbSNP
rs2840294 2276 dbSNP
rs868423943 2278 dbSNP
rs934714360 2285 dbSNP
rs1254155791 2290 dbSNP
rs1273601850 2306 dbSNP
rs1480459818 2306 dbSNP
rs1342811689 2310 dbSNP
rs527305285 2311 dbSNP
rs1276593383 2318 dbSNP
rs1322635886 2323 dbSNP
rs941718402 2329 dbSNP
rs1232067565 2332 dbSNP
rs1352834803 2335 dbSNP
rs1037438792 2336 dbSNP
rs1408634941 2347 dbSNP
rs1393916488 2349 dbSNP
rs913714130 2354 dbSNP
rs763411901 2357 dbSNP
rs1239409545 2373 dbSNP
rs527880131 2374 dbSNP
rs1473557483 2385 dbSNP
rs1051636799 2388 dbSNP
rs142244641 2402 dbSNP
rs1391121717 2405 dbSNP
rs1055678126 2407 dbSNP
rs182039049 2408 dbSNP
rs1211912862 2410 dbSNP
rs1488925291 2424 dbSNP
rs533393067 2426 dbSNP
rs1172247642 2429 dbSNP
rs1272984944 2437 dbSNP
rs1212186733 2454 dbSNP
rs1331868565 2463 dbSNP
rs1289479877 2464 dbSNP
rs567479017 2465 dbSNP
rs1037336441 2468 dbSNP
rs1013756235 2470 dbSNP
rs1333421192 2473 dbSNP
rs1399504717 2475 dbSNP
rs549880831 2483 dbSNP
rs1302750375 2487 dbSNP
rs570150490 2490 dbSNP
rs535911624 2491 dbSNP
rs1334444445 2501 dbSNP
rs1387061825 2509 dbSNP
rs1369747542 2539 dbSNP
rs898844738 2548 dbSNP
rs1432377568 2573 dbSNP
rs1458576758 2580 dbSNP
rs1296615190 2591 dbSNP
rs1042652609 2592 dbSNP
rs993221446 2603 dbSNP
rs1365567918 2611 dbSNP
rs878953682 2619 dbSNP
rs1000843665 2620 dbSNP
rs1201046247 2626 dbSNP
rs1434033221 2629 dbSNP
rs1252554701 2650 dbSNP
rs895596276 2652 dbSNP
rs1014830144 2657 dbSNP
rs1269339076 2668 dbSNP
rs1205119439 2669 dbSNP
rs1344463554 2670 dbSNP
rs1023172233 2673 dbSNP
rs1349156445 2689 dbSNP
rs1257287940 2692 dbSNP
rs1233319227 2695 dbSNP
rs1346735044 2704 dbSNP
rs965126691 2708 dbSNP
rs970676913 2709 dbSNP
rs1201078767 2716 dbSNP
rs996292103 2718 dbSNP
rs978993699 2729 dbSNP
rs1032948648 2736 dbSNP
rs549201473 2740 dbSNP
rs534400417 2749 dbSNP
rs954604512 2763 dbSNP
rs752098704 2765 dbSNP
rs966868651 2769 dbSNP
rs762641532 2771 dbSNP
rs922669584 2789 dbSNP
rs1171944934 2802 dbSNP
rs907817925 2803 dbSNP
rs934128439 2808 dbSNP
rs1249109412 2809 dbSNP
rs963027378 2810 dbSNP
rs1258816551 2821 dbSNP
rs1377525939 2826 dbSNP
rs1200570049 2836 dbSNP
rs973037002 2838 dbSNP
rs987668876 2842 dbSNP
rs910393262 2848 dbSNP
rs926997759 2855 dbSNP
rs1342392380 2867 dbSNP
rs145948371 2869 dbSNP
rs1269423986 2877 dbSNP
rs1224903849 2881 dbSNP
rs1342227519 2889 dbSNP
rs1478618360 2893 dbSNP
rs1415488770 2894 dbSNP
rs77952425 2896 dbSNP
rs1426589343 2899 dbSNP
rs1431906314 2902 dbSNP
rs1056890040 2920 dbSNP
rs577084946 2939 dbSNP
rs949593316 2940 dbSNP
rs1455319234 2941 dbSNP
rs1042600266 2951 dbSNP
rs902800256 2956 dbSNP
rs1319464616 2959 dbSNP
rs186275930 2971 dbSNP
rs766797065 2983 dbSNP
rs1483189618 3000 dbSNP
rs1271801298 3013 dbSNP
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rs538113485 6131 dbSNP
rs952469429 6134 dbSNP
rs1216459703 6136 dbSNP
rs1280016703 6143 dbSNP
rs1262397938 6148 dbSNP
rs1320882392 6159 dbSNP
rs983776999 6174 dbSNP
rs36107734 6179 dbSNP
rs1221880047 6182 dbSNP
rs1218878978 6185 dbSNP
rs769175793 6192 dbSNP
rs1286930783 6195 dbSNP
rs969124431 6200 dbSNP
rs1015765363 6214 dbSNP
rs1359502732 6222 dbSNP
rs981832534 6223 dbSNP
rs1481547756 6235 dbSNP
rs776064540 6238 dbSNP
rs1404072255 6242 dbSNP
rs1180266858 6252 dbSNP
rs1172833900 6261 dbSNP
rs1407793785 6270 dbSNP
rs1420031276 6271 dbSNP
rs1419014298 6274 dbSNP
rs552121236 6301 dbSNP
rs1184978624 6313 dbSNP
rs1474001428 6315 dbSNP
rs971353472 6316 dbSNP
rs1238410698 6318 dbSNP
rs1203653165 6326 dbSNP
rs761314018 6334 dbSNP
rs1227329693 6342 dbSNP
rs568873939 6350 dbSNP
rs556422779 6353 dbSNP
rs537903339 6355 dbSNP
rs989470296 6360 dbSNP
rs1348681983 6366 dbSNP
rs1198677358 6374 dbSNP
rs1306582169 6384 dbSNP
rs551197731 6391 dbSNP
rs1229645726 6395 dbSNP
rs1302004407 6397 dbSNP
rs567902403 6401 dbSNP
rs1283366891 6407 dbSNP
rs1450371660 6408 dbSNP
rs536829104 6410 dbSNP
rs1333472519 6415 dbSNP
rs989001793 6421 dbSNP
rs1365646348 6425 dbSNP
rs1406463643 6427 dbSNP
rs1353980430 6428 dbSNP
rs1168690175 6441 dbSNP
rs913511310 6444 dbSNP
rs966860853 6452 dbSNP
rs947639157 6453 dbSNP
rs1277378694 6459 dbSNP
rs1043037481 6460 dbSNP
rs1183302865 6485 dbSNP
rs1443357317 6496 dbSNP
rs1372411495 6500 dbSNP
rs1179785189 6504 dbSNP
rs977621204 6508 dbSNP
rs575055532 6519 dbSNP
rs1223388158 6522 dbSNP
rs1321884973 6524 dbSNP
rs942755728 6531 dbSNP
rs1041192518 6532 dbSNP
rs1308825069 6539 dbSNP
rs900991265 6544 dbSNP
rs1309938568 6554 dbSNP
rs1445949188 6566 dbSNP
rs1372774455 6574 dbSNP
rs1245080491 6583 dbSNP
rs924479533 6585 dbSNP
rs1438888312 6587 dbSNP
rs1350649101 6590 dbSNP
rs1350241427 6591 dbSNP
rs943927049 6594 dbSNP
rs1423181986 6595 dbSNP
rs1382518229 6601 dbSNP
rs1292665131 6605 dbSNP
rs994030514 6607 dbSNP
rs1203347632 6608 dbSNP
rs1247818494 6616 dbSNP
rs1192360119 6623 dbSNP
rs1488617096 6624 dbSNP
rs1047351048 6639 dbSNP
rs1219761395 6652 dbSNP
rs1040963138 6654 dbSNP
rs921209847 6656 dbSNP
rs1481061123 6666 dbSNP
rs1355672215 6669 dbSNP
rs1179326943 6676 dbSNP
rs1238263933 6681 dbSNP
rs1314990483 6682 dbSNP
rs888347411 6683 dbSNP
rs1005885018 6692 dbSNP
rs1346202579 6698 dbSNP
rs142283779 6699 dbSNP
rs750072864 6706 dbSNP
rs762557909 6710 dbSNP
rs573458770 6711 dbSNP
rs1164768467 6712 dbSNP
rs1362523452 6715 dbSNP
rs1385360798 6720 dbSNP
rs1425979976 6730 dbSNP
rs1326225160 6735 dbSNP
rs1433307214 6735 dbSNP
rs538674745 6752 dbSNP
rs1353591485 6754 dbSNP
rs1489036188 6754 dbSNP
rs1442397126 6756 dbSNP
rs888153700 6759 dbSNP
rs1299678546 6763 dbSNP
rs1003244666 6777 dbSNP
rs1484867471 6783 dbSNP
rs1380285928 6784 dbSNP
rs1245235762 6791 dbSNP
rs1003974191 6800 dbSNP
rs1037578149 6801 dbSNP
rs906720374 6802 dbSNP
rs1221923461 6803 dbSNP
rs1315602755 6804 dbSNP
rs1296778502 6818 dbSNP
rs1361449543 6824 dbSNP
rs1382064563 6829 dbSNP
rs1383223879 6831 dbSNP
rs115020498 6832 dbSNP
rs1470581720 6835 dbSNP
rs1272299584 6840 dbSNP
rs1404745001 6852 dbSNP
rs575653740 6859 dbSNP
rs1033880884 6862 dbSNP
rs11446387 6865 dbSNP
rs141604285 6866 dbSNP
rs66951963 6866 dbSNP
rs140112826 6867 dbSNP
rs959651308 6874 dbSNP
rs1258002419 6875 dbSNP
rs1201019958 6879 dbSNP
rs1461124308 6881 dbSNP
rs138539097 6882 dbSNP
rs1201807587 6884 dbSNP
rs1320296119 6893 dbSNP
rs1271033785 6894 dbSNP
rs1245537213 6911 dbSNP
rs769637166 6916 dbSNP
rs141127480 6917 dbSNP
rs967165854 6927 dbSNP
rs1334150422 6929 dbSNP
rs978217053 6934 dbSNP
rs911984610 6942 dbSNP
rs766166313 6945 dbSNP
rs1396548506 6949 dbSNP
rs150748257 6952 dbSNP
rs976613969 6956 dbSNP
rs1369991479 6970 dbSNP
rs559933601 6975 dbSNP
rs922652822 6977 dbSNP
rs560208600 6979 dbSNP
rs139114229 6980 dbSNP
rs1046856216 6981 dbSNP
rs551893147 6988 dbSNP
rs1273788905 6990 dbSNP
rs888284326 6994 dbSNP
rs149482694 6995 dbSNP
rs572066422 6996 dbSNP
rs1247115332 6999 dbSNP
rs1359149645 7001 dbSNP
rs904849626 7010 dbSNP
rs1036764793 7022 dbSNP
rs1335888968 7023 dbSNP
rs906305089 7025 dbSNP
rs375643505 7027 dbSNP
rs561250808 7027 dbSNP
rs1003660572 7028 dbSNP
rs1216588798 7030 dbSNP
rs752750442 7034 dbSNP
rs1423821961 7035 dbSNP
rs895365084 7050 dbSNP
rs1009731661 7053 dbSNP
rs531204660 7070 dbSNP
rs1265312927 7102 dbSNP
rs1445786501 7105 dbSNP
rs1193081888 7110 dbSNP
rs1011122668 7113 dbSNP
rs1475394237 7127 dbSNP
rs969333726 7137 dbSNP
rs1269800959 7138 dbSNP
rs1475436279 7149 dbSNP
rs1187945506 7153 dbSNP
rs1223468806 7155 dbSNP
rs548344171 7156 dbSNP
rs1490306994 7157 dbSNP
rs1290025003 7158 dbSNP
rs568141690 7161 dbSNP
rs1242963481 7170 dbSNP
rs1194589496 7176 dbSNP
rs1022690769 7181 dbSNP
rs979021239 7184 dbSNP
rs1426812750 7199 dbSNP
rs911508356 7210 dbSNP
rs757400411 7224 dbSNP
rs536861970 7226 dbSNP
rs976726734 7232 dbSNP
rs778908796 7237 dbSNP
rs147199256 7248 dbSNP
rs1019018761 7253 dbSNP
rs1401252662 7255 dbSNP
rs567063476 7258 dbSNP
rs1156724101 7266 dbSNP
rs1468706999 7268 dbSNP
rs539274571 7269 dbSNP
rs909712967 7270 dbSNP
rs1490230040 7280 dbSNP
rs770700394 7293 dbSNP
rs1028167503 7295 dbSNP
rs774204667 7296 dbSNP
rs1267214894 7299 dbSNP
rs1327151812 7299 dbSNP
rs1448103225 7307 dbSNP
rs1284236139 7308 dbSNP
rs953914379 7313 dbSNP
rs1203867020 7322 dbSNP
rs182860786 7326 dbSNP
rs1283306520 7328 dbSNP
rs1281410177 7344 dbSNP
rs1345121777 7387 dbSNP
rs1224291649 7407 dbSNP
rs1222530837 7415 dbSNP
rs1343213040 7425 dbSNP
rs1279888381 7427 dbSNP
rs1044975664 7430 dbSNP
rs1285647237 7435 dbSNP
rs1344357074 7444 dbSNP
rs909813590 7457 dbSNP
rs939690515 7458 dbSNP
rs1416085835 7463 dbSNP
rs1205098586 7476 dbSNP
rs1177155462 7477 dbSNP
rs1285543401 7488 dbSNP
rs939287832 7488 dbSNP
rs1188480989 7489 dbSNP
rs1475968116 7494 dbSNP
rs569276030 7500 dbSNP
rs927734020 7507 dbSNP
rs1241879714 7514 dbSNP
rs1056016306 7519 dbSNP
rs1462994645 7522 dbSNP
rs188809024 7525 dbSNP
rs1202435037 7548 dbSNP
rs1320775634 7556 dbSNP
rs1009318621 7557 dbSNP
rs1055189175 7559 dbSNP
rs895334029 7561 dbSNP
rs946948431 7573 dbSNP
rs1022489761 7574 dbSNP
rs554670577 7577 dbSNP
rs1383382422 7579 dbSNP
rs746072361 7580 dbSNP
rs902796390 7586 dbSNP
rs1199694274 7601 dbSNP
rs574562897 7623 dbSNP
rs115202314 7624 dbSNP
rs1157733147 7626 dbSNP
rs1172891158 7627 dbSNP
rs1019365342 7628 dbSNP
rs901892982 7642 dbSNP
rs1402306325 7644 dbSNP
rs996274811 7646 dbSNP
rs1185103790 7652 dbSNP
rs1028136465 7654 dbSNP
rs1244350828 7676 dbSNP
rs113437985 7678 dbSNP
rs754697902 7685 dbSNP
rs1459646460 7695 dbSNP
rs953840510 7696 dbSNP
rs984390212 7698 dbSNP
rs1234105629 7700 dbSNP
rs1405848113 7700 dbSNP
rs1306487410 7701 dbSNP
rs113868220 7702 dbSNP
rs1165439396 7702 dbSNP
rs1177233801 7702 dbSNP
rs1224211665 7702 dbSNP
rs1230868788 7702 dbSNP
rs1270657795 7702 dbSNP
rs1354108745 7702 dbSNP
rs1386250124 7702 dbSNP
rs1409531412 7702 dbSNP
rs1443256328 7702 dbSNP
rs1480117790 7702 dbSNP
rs56809946 7702 dbSNP
rs60598615 7702 dbSNP
rs71087156 7702 dbSNP
rs71809486 7702 dbSNP
rs767469924 7702 dbSNP
rs773742058 7702 dbSNP
rs767625751 7703 dbSNP
rs1490471182 7704 dbSNP
rs753900357 7705 dbSNP
rs1290743156 7712 dbSNP
rs375900922 7714 dbSNP
rs1238803889 7718 dbSNP
rs1280440469 7723 dbSNP
rs1318611095 7729 dbSNP
rs1309270886 7730 dbSNP
rs145371924 7734 dbSNP
rs1224455851 7736 dbSNP
rs760437278 7739 dbSNP
rs774693296 7739 dbSNP
rs1372665919 7743 dbSNP
rs1296736537 7749 dbSNP
rs1406985474 7753 dbSNP
rs1366600901 7755 dbSNP
rs1302851374 7763 dbSNP
rs1423325542 7766 dbSNP
rs1366005837 7782 dbSNP
rs1160436322 7784 dbSNP
rs1418041403 7802 dbSNP
rs1405157246 7812 dbSNP
rs1016844756 7821 dbSNP
rs1244410478 7823 dbSNP
rs1267956876 7824 dbSNP
rs1289047198 7826 dbSNP
rs977010827 7846 dbSNP
rs1261286313 7853 dbSNP
rs961630775 7877 dbSNP
rs1316475770 7901 dbSNP
rs1029659763 7910 dbSNP
rs1346340270 7915 dbSNP
rs972388722 7919 dbSNP
rs1283066257 7923 dbSNP
rs1661 7927 dbSNP
rs982868031 7929 dbSNP
rs79783713 7933 dbSNP
rs1453655612 7944 dbSNP
rs142039150 7946 dbSNP
rs1180825317 7955 dbSNP
rs1470015967 7958 dbSNP
rs193217435 7959 dbSNP
rs562629783 7961 dbSNP
rs1364101186 7968 dbSNP
rs1441529148 7975 dbSNP
rs1196799408 7989 dbSNP
rs747389336 7998 dbSNP
rs1262155457 7999 dbSNP
rs564243853 7999 dbSNP
rs1484816795 8005 dbSNP
rs926459111 8018 dbSNP
rs1425352569 8024 dbSNP
rs1324344812 8026 dbSNP
rs769087766 8033 dbSNP
rs774893643 8035 dbSNP
rs1328617634 8052 dbSNP
rs764885386 8053 dbSNP
rs1056348441 8065 dbSNP
rs1382187626 8071 dbSNP
rs1394639820 8072 dbSNP
rs531367149 8073 dbSNP
rs541821183 8074 dbSNP
rs1404721520 8077 dbSNP
rs1330043040 8083 dbSNP
rs1173886458 8086 dbSNP
rs1044321123 8097 dbSNP
rs777115149 8101 dbSNP
rs762360436 8113 dbSNP
rs561784477 8117 dbSNP
rs199841490 8121 dbSNP
rs1007313318 8135 dbSNP
rs562803585 8138 dbSNP
rs527342984 8152 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gcgguaaagggaaUUUCAGUGu 5'
                       |:|||||| 
Target 5' -------ucaggaAGAGUCACa 3'
 		1 - 15
Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
CLIP-seq Support 1 for dataset SRR1045082
Method / RBP PAR-CLIP / AGO2
Cell line / Condition MCF7 / Untreated
Location of target site ENST00000361127.5 | 3UTR | UCAGGAAGAGUCACAUUGCUGCUUAACAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24398324 / SRX388831
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
Click to see details
53 hsa-miR-3164 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058547 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT108711 XIAP X-linked inhibitor of apoptosis 2 2
MIRT251550 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT333466 SLC25A44 solute carrier family 25 member 44 2 2
MIRT441660 COCH cochlin 2 2
MIRT446514 PLSCR1 phospholipid scramblase 1 2 2
MIRT447498 TEX261 testis expressed 261 2 2
MIRT447787 NUPL2 nucleoporin like 2 2 2
MIRT447947 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT450182 TMEM9B TMEM9 domain family member B 2 2
MIRT450508 USP37 ubiquitin specific peptidase 37 2 2
MIRT456957 SPAM1 sperm adhesion molecule 1 2 2
MIRT463316 ZFP1 ZFP1 zinc finger protein 2 2
MIRT465137 TSC22D2 TSC22 domain family member 2 2 2
MIRT481204 ATXN7L3B ataxin 7 like 3B 2 2
MIRT489315 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT499198 TJAP1 tight junction associated protein 1 2 2
MIRT502024 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT503624 POLR2F RNA polymerase II subunit F 2 4
MIRT510310 CA12 carbonic anhydrase 12 2 4
MIRT515969 C9orf156 tRNA methyltransferase O 2 4
MIRT520425 TUBG1 tubulin gamma 1 2 2
MIRT530293 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT530893 FAT3 FAT atypical cadherin 3 2 2
MIRT546121 USP13 ubiquitin specific peptidase 13 2 2
MIRT549592 TMEM101 transmembrane protein 101 2 2
MIRT552591 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT554976 RAB5C RAB5C, member RAS oncogene family 2 4
MIRT562535 CCNG1 cyclin G1 2 2
MIRT564574 ZXDA zinc finger, X-linked, duplicated A 2 2
MIRT564909 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 2
MIRT576553 Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 2 2
MIRT612805 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT614932 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT624204 DCP2 decapping mRNA 2 2 4
MIRT624711 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 2
MIRT625553 GABRB2 gamma-aminobutyric acid type A receptor beta2 subunit 2 2
MIRT626026 POT1 protection of telomeres 1 2 2
MIRT627559 SMAD6 SMAD family member 6 2 2
MIRT667617 LIMCH1 LIM and calponin homology domains 1 2 2
MIRT667631 LHFPL2 LHFPL tetraspan subfamily member 2 2 2
MIRT669722 A1CF APOBEC1 complementation factor 2 2
MIRT695124 PRY2 PTPN13-like, Y-linked 2 2 2
MIRT695141 PRY PTPN13-like, Y-linked 2 2
MIRT695498 ALPI alkaline phosphatase, intestinal 2 2
MIRT696076 MAST3 microtubule associated serine/threonine kinase 3 2 2
MIRT702739 IL6ST interleukin 6 signal transducer 2 2
MIRT710439 BTNL3 butyrophilin like 3 2 2
MIRT711341 FMNL2 formin like 2 2 2
MIRT715117 PANK3 pantothenate kinase 3 2 2
MIRT716008 ASB11 ankyrin repeat and SOCS box containing 11 2 2
MIRT717227 SH2D5 SH2 domain containing 5 2 2
MIRT723983 SOX17 SRY-box 17 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3164 Paclitaxel 36314 NSC125973 approved sensitive High Laryngeal Cancer cell line (Hep2)
hsa-miR-3164 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-3164 Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-3164 Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-3164 Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (mitochondrial RNA)
hsa-miR-3164 Palbociclib 5330286 NSC758247 approved sensitive cell line (T47D)
hsa-miR-3164 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3164 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-3164 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-3164 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-3164 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3164 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-3164 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (100 ng/ml)
hsa-miR-3164 Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)

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