pre-miRNA Information
pre-miRNA hsa-mir-2115   
Genomic Coordinates chr3: 48316360 - 48316459
Description Homo sapiens miR-2115 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-2115-3p
Sequence 58| CAUCAGAAUUCAUGGAGGCUAG |79
Evidence Experimental
Experiments 454
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31490809 22 COSMIC
COSN31579735 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs543123304 18 dbSNP
rs1450988157 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GALNT4   
Synonyms GALNAC-T4, GALNACT4
Description polypeptide N-acetylgalactosaminyltransferase 4
Transcript NM_003774   
Expression
Putative miRNA Targets on GALNT4
3'UTR of GALNT4
(miRNA target sites are highlighted)
>GALNT4|NM_003774|3'UTR
   1 AGCACAACAGCACTTTCGTCATGAGCTGACAGTAGTGTCAAGAAAGTCAAAGAGCCTTAAGAGCCTCAGTGAAGATTGTA
  81 TTTTATTTTATCAAAAGCCACCTAGCAGTCATCTGTGGAGCACTGGAAAGCTGGGGTTCATTTTGGTATATCACACTGAA
 161 ACTGGGTACCCAGAGTGCTGCTGTTTAATATTTCACAATGCCTTACTTATTGGTTGTTTTATATAAGAGTTTTGTCAATA
 241 TGGTCTCTTCTTAAAAGAAGTTGACTATGAATTGAAACACACAAAACATTTAAGTGCCAGACTTAATATTAAAGAATGTA
 321 AAGGTCCAAGTAAAATGAGGTATGATTTATGTTGATGTGTAAGTTCACCGCACATCCCACTTTTTAACAAAACTCATGAA
 401 TGTGCAGTTTGAGCCATTGCTATTTTGATTACATAGAATTTGTATTTCTTTTTTAGCCAGCACATTAAATTTTAGATTTT
 481 ATTTTTTAATCTAATTTTTTTCTAATCAAAAAGAAAATTGAGCTTAAGGCAAAAGGCCTGGTTTTAGAGATATGTGTAAT
 561 TGGAAGAGGGCATTTGTTTGAGTGTGAGTTTGGAGGCCTTTTTAACATGCAGACATACCCATATTTAAATGAAATGGGGA
 641 GATATTTACATTCCGTACTTTGTAAACTTGAGCTATTGGACTTCACTGATGTATATATTAATACCTCAGATTCCTCTGAT
 721 TTTGTAAGCTGTCTTCTCTGTGAACGTGTTTGTGTGTGTAGGGCATTTTCTGATTGCACTTCCTTAAGTTATGAATGTAC
 801 TAGAAAGGGACTCATCCAGAATACTATGCCTCCCTTTGTTAATGCTTAATCATTTAAAGTAAACACAATTGAAGCCTCTC
 881 TGAAGTTAAACCCAACTATGTTTATTAAAATGTGTGAAACTGAAAGTGGGCTAGGTTCTACCAAGGCTGTGGAACTCTCC
 961 TACGAGTTCTGCTGATCAGGAAATTTAAGAATTTATCTTAAAAATGCAAGGAAAAAAGACTGCCTTGGCAATTGTGAATG
1041 GTGCTTTCAATCTCCTAGCACCGAGCCTGGCACTTAGGCAGCTTTCAGTAAGTGGGTGAATGAATGACTGAATGAATGAA
1121 TGAATGGCTCAGCTGAGGAATGTAACTTTGGTCAAGTTATTATGATGTGTTTGGGCTTAGTTTTCTCATTGGTAAAATGT
1201 GGGTGCTGGATTGGATCTTAAAGATCCCTTCCAGCTCTGAAATGCTGATTGTACAGTATATTCTTCCCAGATTGACTCAC
1281 TGTGCAATCTTTACAATACTTTTTATCTTTTCACTTTTGACATAGGTAATGTTGTTGAGCAGTTGAGCAATGTTCAGTCC
1361 AGTTGTGAAGCTGGAGAAGAGAAATGGGTTTTAAAAATTAAGTGAGGGGAGGCCGGGTGCGGTGGCTCACGCATGTAATC
1441 CCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACGAGGTCAGGAGATCCAGACCATCCTGGCTAACATGGTGAAACCTCG
1521 TCTCTACTAAAAATACAAAAAATTAGCCAGCTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG
1601 AGAATGGCGTGAACCTGTGAGGCAGAGCTTACAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAA
1681 GACTCTGTCTCAAAAAAAAAAAATAATAATAAAATAAGTGAGCTGAACTCACCTGAAGTGGTTTACTTCTGTGGGTTAAG
1761 AAGTTCTAGTCAGTGTTCATAGTCGTTTCGTTTTGATAATTGTTGAACCAATTTTGTTTTTAAAACCTTTAGACTCTGAA
1841 AGTAATATTTTGACTAAGAATGTAAATATTTCCAAACTAAATTACTCGGGAAGTAAACGCTTTTTTTAAAAGTATTTTTA
1921 CTGGTTTTATACCAATATTATATGCAGAAATCACAGGATGAATTTAGAATTAAATCTCAATTAGTTCACTTTGGCCTAGA
2001 TTTATGAAAAATGCATGCCTCGTAAAGAGTCCACTGTATTCACGAGTAAAGTTGCTTTTAGTGTTCACTTGATGACTTGG
2081 AGAGTAGGAATTTTGCAAAATCTGAATTTAAGGAAATTCTTTAGGATAACCATTTCAAAAAATAAAATTGCTATGCAATC
2161 TTGAATATTTTCTCTTTTGCCTCGTAAAATGAAAATGCATTCACAGTTTCTGTAAATTATTTAGCAGCCTTAAAGTTTAT
2241 CAAAAAATTGTCCAGATTCCACGTGCAGCATGCTTGGCCCTGCATTTAATTTAAGAAGGATTAATAATAATGCTCTGAAT
2321 TTTTCGAAAGGGATTCTCCTAAACCCACCCACTTCTCTTGCCCAGGCTGCTTTTTAAAAATATTTTTTTATTTTTTACTT
2401 ATTTTTAAATTTTCTCTTTTTATTTATTTTTGGTTTTCTTGTTAGCCACCTGTTATATGGGAGAACGAAAATTGTTATAT
2481 TTTGAAAGTACTTATTACATTATTTTTATTTTAGTATCTTGATGCTCCTGTCAAAAGGGAAATGAGGCTTTTAAAAATAA
2561 AGTACCTTAATTCTTTATTGACTTTTTGCCCTAAATTGCTAGGTGTGACCCAGCAATCTTTTAGGAAGAGATTTTACAGT
2641 GGTGCTTTATTTATATCAATAATCCAGTATAGTTAGGCTGTTCATTCCTCATAATAGAGTACATAACAGAAAAGTGGGAC
2721 TTTCACATTTTCATATTTAGGCACGTTCCAATTTAATTCCAAAAATACTCTGTAATTCTACATCTAAAAAAACCGATTCC
2801 CTAATTCGAATTTATTGGTACCAAAGCTCTCTTTGGCTATAGACAATTAAGAGTTGACCTTTTAAGTTAATGTATATGCT
2881 TAAAAACAGTTTTAGGAAAATATTTGGTAGACAAAGAGTTTCAACTTTAAATGTTCACTATGTCATTTAGTGTCCAACTT
2961 TACGGATAGGTTGACTATCTAAATAGGCATTTTTAGTCATTAAAAAAAATCTAGTCACCAGGAGGATCCCTATAACTCAA
3041 AATAACTTGTTTGTAAAAGAAAATTTGTTTACTTACCCATTAGTAAGTTCCTGCATATTCATTATAAGATGGCAAATCAA
3121 ACTTTTCTAGGATGAAGACAGCTTATTTTTAAGTTGTATAGTCTTAGTTGGTTTAGGGTCTCAATTTTAATTAATAAAAT
3201 ACTTGGTTTTTATTTGCTTGTCCTTTTGAATTCCTGTTTTAATAATTTTAAAATGAGCACAAAGAACGTTGAAGTTCAGA
3281 TTAATCTCTTCTGAATGATGTTTTTTTCCTCTGTGATGAGTTGTTTCTGACTTTTTTCCTTTTGTATTTGTAATGTTGAT
3361 TAAGATGTAAAATAAAAAGTGTGCCTGATTATTTTTGCAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaUCGGA---GGUACU--UAAGACUAc 5'
            ||::|   |||| :  |||:|||| 
Target 5' gcAGTTTGAGCCATTGCTATTTTGATt 3'
404 - 430 142.00 -8.92
2
miRNA  3' gaucggagGUACUUAAGACUAc 5'
                  |||   ||||||| 
Target 5' gtgtagggCAT--TTTCTGATt 3'
756 - 775 142.00 -6.60
3
miRNA  3' gaucGGAGG---UACUU----AAGACUac 5'
              ||||:   ||||:    ||||||  
Target 5' ttttCCTCTGTGATGAGTTGTTTCTGAct 3'
3304 - 3332 136.00 -13.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN1153464 6 COSMIC
COSN30153815 92 COSMIC
COSN1592647 93 COSMIC
COSN18736868 119 COSMIC
COSN28881636 140 COSMIC
COSN30509913 150 COSMIC
COSN28184919 172 COSMIC
COSN31523699 695 COSMIC
COSN31545246 701 COSMIC
COSN28198261 807 COSMIC
COSN1592646 1060 COSMIC
COSN1592645 1163 COSMIC
COSN25413639 1247 COSMIC
COSN31960822 1446 COSMIC
COSN5869944 1611 COSMIC
COSN21161007 1701 COSMIC
COSN20109934 1707 COSMIC
COSN20109932 1710 COSMIC
COSN4618992 1792 COSMIC
COSN17397541 1907 COSMIC
COSN29290144 2132 COSMIC
COSN9481777 2376 COSMIC
COSN20109928 3001 COSMIC
COSN31536582 3196 COSMIC
COSN1592644 3230 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs772956146 3 dbSNP
rs1395326050 5 dbSNP
rs1165733871 7 dbSNP
rs1250294964 11 dbSNP
rs1000403457 16 dbSNP
rs540349909 17 dbSNP
rs779143376 17 dbSNP
rs375374574 18 dbSNP
rs372315526 23 dbSNP
rs368332615 25 dbSNP
rs768622198 30 dbSNP
rs746000066 32 dbSNP
rs774490320 39 dbSNP
rs997114286 40 dbSNP
rs771072639 41 dbSNP
rs749556423 43 dbSNP
rs778114584 45 dbSNP
rs756598070 48 dbSNP
rs1041089839 50 dbSNP
rs1221970300 52 dbSNP
rs1306081393 52 dbSNP
rs1437819049 55 dbSNP
rs1317324603 57 dbSNP
rs1387101882 60 dbSNP
rs959928177 65 dbSNP
rs1277759388 66 dbSNP
rs746241512 67 dbSNP
rs1318307567 83 dbSNP
rs1004211360 90 dbSNP
rs1211052186 96 dbSNP
rs1390875942 99 dbSNP
rs887232577 110 dbSNP
rs1048963159 116 dbSNP
rs1484549987 120 dbSNP
rs1164617702 134 dbSNP
rs1343231245 135 dbSNP
rs1407841581 140 dbSNP
rs1440702978 141 dbSNP
rs931372835 147 dbSNP
rs192636409 148 dbSNP
rs573158401 150 dbSNP
rs1434332298 152 dbSNP
rs1384339847 162 dbSNP
rs371784931 164 dbSNP
rs1451190841 165 dbSNP
rs1440053908 169 dbSNP
rs1044182368 177 dbSNP
rs948669798 183 dbSNP
rs1377466217 188 dbSNP
rs550328256 198 dbSNP
rs1300964849 201 dbSNP
rs530074213 206 dbSNP
rs1219416961 209 dbSNP
rs1280190113 210 dbSNP
rs1305288139 211 dbSNP
rs1203125060 223 dbSNP
rs1452223333 227 dbSNP
rs1458596064 239 dbSNP
rs1180967086 240 dbSNP
rs561138708 242 dbSNP
rs114157238 243 dbSNP
rs924266917 245 dbSNP
rs1359001449 253 dbSNP
rs527978112 256 dbSNP
rs1173397027 264 dbSNP
rs1427482284 265 dbSNP
rs1031742185 266 dbSNP
rs1169762212 267 dbSNP
rs1401020838 279 dbSNP
rs1231048723 287 dbSNP
rs367966158 294 dbSNP
rs997997281 300 dbSNP
rs1360395516 303 dbSNP
rs1270091473 313 dbSNP
rs867735627 323 dbSNP
rs187846878 324 dbSNP
rs1276251020 328 dbSNP
rs1359357013 332 dbSNP
rs968467595 348 dbSNP
rs545185576 350 dbSNP
rs1258133371 356 dbSNP
rs576262550 358 dbSNP
rs1201045892 369 dbSNP
rs1028936677 370 dbSNP
rs975560266 371 dbSNP
rs562221685 372 dbSNP
rs1271766469 373 dbSNP
rs1468345603 374 dbSNP
rs542374201 377 dbSNP
rs1248688928 383 dbSNP
rs1474544448 390 dbSNP
rs183076143 392 dbSNP
rs1422295849 395 dbSNP
rs1424385769 404 dbSNP
rs888059260 413 dbSNP
rs1019868628 417 dbSNP
rs1364588653 428 dbSNP
rs778479113 433 dbSNP
rs1393552212 443 dbSNP
rs1049337385 448 dbSNP
rs1168900359 452 dbSNP
rs1324388174 454 dbSNP
rs1429554117 459 dbSNP
rs1278331770 461 dbSNP
rs368505050 463 dbSNP
rs1230881327 465 dbSNP
rs1431397149 472 dbSNP
rs1356194678 475 dbSNP
rs1210873547 488 dbSNP
rs930989870 492 dbSNP
rs1445540348 493 dbSNP
rs1216140755 494 dbSNP
rs1264114112 502 dbSNP
rs1478862892 507 dbSNP
rs1185820467 520 dbSNP
rs1417148689 528 dbSNP
rs918241647 529 dbSNP
rs1185808122 532 dbSNP
rs1478332390 536 dbSNP
rs1399846881 550 dbSNP
rs1248460655 553 dbSNP
rs1036669637 568 dbSNP
rs1004431935 570 dbSNP
rs1490222491 580 dbSNP
rs1311732678 585 dbSNP
rs887108071 589 dbSNP
rs565605848 591 dbSNP
rs928365742 591 dbSNP
rs1349016044 596 dbSNP
rs573540730 603 dbSNP
rs1026965871 607 dbSNP
rs1306102176 609 dbSNP
rs756909563 613 dbSNP
rs561161314 616 dbSNP
rs969909765 618 dbSNP
rs1208902550 626 dbSNP
rs1255513945 627 dbSNP
rs914530277 629 dbSNP
rs990009420 642 dbSNP
rs956070375 654 dbSNP
rs1438855666 655 dbSNP
rs1347763487 657 dbSNP
rs1031648850 660 dbSNP
rs3759319 661 dbSNP
rs1402539216 668 dbSNP
rs73194597 684 dbSNP
rs1244356477 685 dbSNP
rs577993530 687 dbSNP
rs1336758706 688 dbSNP
rs1411332951 692 dbSNP
rs1334439551 694 dbSNP
rs1008178664 695 dbSNP
rs755972742 697 dbSNP
rs1310440025 700 dbSNP
rs1352502558 714 dbSNP
rs115922709 715 dbSNP
rs1414912201 716 dbSNP
rs190539521 729 dbSNP
rs1255577429 731 dbSNP
rs1345843033 732 dbSNP
rs1202181235 737 dbSNP
rs569096701 745 dbSNP
rs550261234 746 dbSNP
rs561316428 748 dbSNP
rs1239741695 755 dbSNP
rs377561749 756 dbSNP
rs1174946645 758 dbSNP
rs1377805312 764 dbSNP
rs536355251 767 dbSNP
rs1184555637 771 dbSNP
rs575897346 772 dbSNP
rs773653479 774 dbSNP
rs1479800286 775 dbSNP
rs1232601917 780 dbSNP
rs1211285868 788 dbSNP
rs867921853 791 dbSNP
rs1261811177 792 dbSNP
rs1379603472 792 dbSNP
rs1439108273 794 dbSNP
rs1223484978 795 dbSNP
rs567601523 796 dbSNP
rs1235589996 807 dbSNP
rs1288460740 808 dbSNP
rs1249685963 809 dbSNP
rs1317263365 815 dbSNP
rs373043632 818 dbSNP
rs547471834 826 dbSNP
rs921019400 829 dbSNP
rs1190349166 830 dbSNP
rs1044150741 832 dbSNP
rs1370741808 833 dbSNP
rs1434536757 834 dbSNP
rs1297311050 837 dbSNP
rs536106477 840 dbSNP
rs948585377 841 dbSNP
rs1408073097 845 dbSNP
rs767377324 847 dbSNP
rs865914631 848 dbSNP
rs1469248141 851 dbSNP
rs527724811 859 dbSNP
rs1293292694 860 dbSNP
rs1391813146 864 dbSNP
rs76480421 868 dbSNP
rs951635082 876 dbSNP
rs955977429 884 dbSNP
rs1027430276 893 dbSNP
rs376103855 908 dbSNP
rs551685621 923 dbSNP
rs1280026341 926 dbSNP
rs905316337 928 dbSNP
rs1023668422 930 dbSNP
rs976521040 932 dbSNP
rs1265776116 938 dbSNP
rs1489283828 943 dbSNP
rs1473962974 954 dbSNP
rs1396084024 959 dbSNP
rs531756284 960 dbSNP
rs1261966935 963 dbSNP
rs1013590808 964 dbSNP
rs1195137225 968 dbSNP
rs774017644 971 dbSNP
rs1056863802 975 dbSNP
rs934600376 978 dbSNP
rs1164566537 981 dbSNP
rs562752158 994 dbSNP
rs1459725227 995 dbSNP
rs1296620725 999 dbSNP
rs1360065575 1009 dbSNP
rs1400707518 1014 dbSNP
rs542662442 1025 dbSNP
rs1300104581 1027 dbSNP
rs752634111 1031 dbSNP
rs3864928 1041 dbSNP
rs1227649710 1055 dbSNP
rs1465747098 1057 dbSNP
rs370354854 1062 dbSNP
rs993625955 1066 dbSNP
rs920894666 1069 dbSNP
rs370187978 1079 dbSNP
rs1488405032 1083 dbSNP
rs1305727112 1087 dbSNP
rs1314680909 1089 dbSNP
rs146030630 1101 dbSNP
rs114108949 1106 dbSNP
rs982959563 1108 dbSNP
rs1425934394 1109 dbSNP
rs951743640 1112 dbSNP
rs1384660327 1116 dbSNP
rs577745539 1116 dbSNP
rs558058196 1119 dbSNP
rs1160581832 1120 dbSNP
rs1312690002 1127 dbSNP
rs1431414481 1127 dbSNP
rs974515357 1130 dbSNP
rs1451746562 1151 dbSNP
rs1389305886 1155 dbSNP
rs776833475 1160 dbSNP
rs1044569176 1161 dbSNP
rs1023553883 1164 dbSNP
rs1013643152 1167 dbSNP
rs1451722826 1171 dbSNP
rs948487507 1186 dbSNP
rs892866656 1189 dbSNP
rs544532033 1205 dbSNP
rs1354023649 1206 dbSNP
rs56337321 1209 dbSNP
rs768899367 1215 dbSNP
rs1311137140 1216 dbSNP
rs934484540 1220 dbSNP
rs1484519431 1222 dbSNP
rs1177237003 1223 dbSNP
rs186930561 1226 dbSNP
rs1183378733 1231 dbSNP
rs1450541700 1232 dbSNP
rs1423241300 1234 dbSNP
rs1413990234 1244 dbSNP
rs924559862 1250 dbSNP
rs747094009 1254 dbSNP
rs998696589 1258 dbSNP
rs142319209 1260 dbSNP
rs1042985089 1261 dbSNP
rs1448669837 1270 dbSNP
rs1011865822 1272 dbSNP
rs114534886 1276 dbSNP
rs986512960 1279 dbSNP
rs539197188 1285 dbSNP
rs1361158096 1287 dbSNP
rs578228606 1289 dbSNP
rs1244959290 1296 dbSNP
rs1257928721 1302 dbSNP
rs1458495553 1303 dbSNP
rs972260100 1304 dbSNP
rs1245261224 1313 dbSNP
rs746177246 1313 dbSNP
rs1191886296 1314 dbSNP
rs1427329450 1314 dbSNP
rs1035705271 1320 dbSNP
rs553067126 1321 dbSNP
rs1297601524 1322 dbSNP
rs1467007384 1325 dbSNP
rs571329022 1327 dbSNP
rs1380511380 1332 dbSNP
rs551618753 1337 dbSNP
rs1361303727 1341 dbSNP
rs1276199969 1347 dbSNP
rs1337813428 1350 dbSNP
rs1047720853 1353 dbSNP
rs748978029 1359 dbSNP
rs1278132362 1365 dbSNP
rs1319193052 1366 dbSNP
rs905416012 1370 dbSNP
rs930154718 1401 dbSNP
rs1363925916 1404 dbSNP
rs1451301274 1406 dbSNP
rs571690521 1414 dbSNP
rs920054660 1415 dbSNP
rs551828831 1417 dbSNP
rs549302595 1420 dbSNP
rs777432527 1421 dbSNP
rs1192974088 1423 dbSNP
rs1424322916 1425 dbSNP
rs1478761359 1426 dbSNP
rs1161288988 1428 dbSNP
rs974354696 1430 dbSNP
rs969589750 1431 dbSNP
rs1012499274 1433 dbSNP
rs1398911776 1440 dbSNP
rs916609037 1443 dbSNP
rs563108610 1451 dbSNP
rs992100434 1460 dbSNP
rs1230230768 1461 dbSNP
rs1282893447 1466 dbSNP
rs1356131657 1470 dbSNP
rs892897786 1473 dbSNP
rs779609950 1474 dbSNP
rs960816489 1475 dbSNP
rs1031036711 1477 dbSNP
rs1216071981 1482 dbSNP
rs1263965757 1483 dbSNP
rs999982176 1488 dbSNP
rs528582053 1491 dbSNP
rs903001682 1493 dbSNP
rs1040581805 1495 dbSNP
rs1342584191 1502 dbSNP
rs1164764072 1507 dbSNP
rs1252881298 1508 dbSNP
rs1021852438 1510 dbSNP
rs1378169279 1514 dbSNP
rs534742317 1517 dbSNP
rs899739229 1518 dbSNP
rs1301962959 1519 dbSNP
rs1158776302 1520 dbSNP
rs559972526 1524 dbSNP
rs752162194 1525 dbSNP
rs910421332 1527 dbSNP
rs1393750141 1528 dbSNP
rs1332777177 1543 dbSNP
rs1340334269 1545 dbSNP
rs986138337 1548 dbSNP
rs1017979165 1552 dbSNP
rs1007897811 1557 dbSNP
rs540348529 1560 dbSNP
rs377705111 1561 dbSNP
rs544252943 1564 dbSNP
rs929675585 1569 dbSNP
rs898683329 1570 dbSNP
rs1277899338 1571 dbSNP
rs1038916428 1575 dbSNP
rs1442929920 1582 dbSNP
rs972125899 1584 dbSNP
rs948330237 1585 dbSNP
rs1461871576 1587 dbSNP
rs916826867 1590 dbSNP
rs544469152 1591 dbSNP
rs1365112391 1592 dbSNP
rs1464118460 1599 dbSNP
rs1171471470 1602 dbSNP
rs754934008 1608 dbSNP
rs1481114719 1609 dbSNP
rs1426662157 1611 dbSNP
rs982666400 1614 dbSNP
rs1198183507 1628 dbSNP
rs1310275510 1631 dbSNP
rs1438081152 1634 dbSNP
rs923896007 1635 dbSNP
rs865870414 1640 dbSNP
rs137896014 1641 dbSNP
rs1021485508 1646 dbSNP
rs555673149 1647 dbSNP
rs989965848 1653 dbSNP
rs541642932 1657 dbSNP
rs957015679 1666 dbSNP
rs866846577 1670 dbSNP
rs1252302368 1671 dbSNP
rs1321442504 1678 dbSNP
rs1282762828 1679 dbSNP
rs1229170523 1681 dbSNP
rs1431094573 1683 dbSNP
rs1337765584 1686 dbSNP
rs1327174253 1690 dbSNP
rs1391174830 1691 dbSNP
rs1403406442 1692 dbSNP
rs1339243938 1694 dbSNP
rs1032750670 1697 dbSNP
rs183227431 1701 dbSNP
rs1179211989 1703 dbSNP
rs10745507 1704 dbSNP
rs1332449692 1704 dbSNP
rs1398662453 1704 dbSNP
rs1385284148 1705 dbSNP
rs1403219062 1705 dbSNP
rs1323086092 1706 dbSNP
rs902907435 1706 dbSNP
rs71454159 1707 dbSNP
rs749981375 1708 dbSNP
rs763515094 1708 dbSNP
rs1317212678 1709 dbSNP
rs1365174570 1709 dbSNP
rs10858895 1710 dbSNP
rs371047480 1711 dbSNP
rs755730595 1711 dbSNP
rs879060380 1711 dbSNP
rs1267568607 1712 dbSNP
rs879183047 1712 dbSNP
rs1190856596 1713 dbSNP
rs1422187749 1715 dbSNP
rs1477761275 1715 dbSNP
rs201411448 1715 dbSNP
rs1293164225 1716 dbSNP
rs145770216 1716 dbSNP
rs1366366061 1717 dbSNP
rs1406908094 1728 dbSNP
rs752365691 1736 dbSNP
rs767273468 1745 dbSNP
rs1400514311 1749 dbSNP
rs890798485 1751 dbSNP
rs1459928417 1755 dbSNP
rs1319741320 1759 dbSNP
rs1243718577 1764 dbSNP
rs1025709314 1766 dbSNP
rs557728760 1767 dbSNP
rs993945795 1777 dbSNP
rs537891190 1778 dbSNP
rs569436063 1784 dbSNP
rs948215078 1785 dbSNP
rs374493343 1788 dbSNP
rs1187647422 1789 dbSNP
rs1050331810 1790 dbSNP
rs895283581 1793 dbSNP
rs930654380 1805 dbSNP
rs1386173132 1808 dbSNP
rs1426754167 1809 dbSNP
rs1238664753 1816 dbSNP
rs751383220 1838 dbSNP
rs1317653017 1845 dbSNP
rs1360009148 1853 dbSNP
rs766329665 1854 dbSNP
rs1454342297 1855 dbSNP
rs1290570622 1874 dbSNP
rs1451014406 1875 dbSNP
rs923977150 1877 dbSNP
rs940806323 1883 dbSNP
rs1382718918 1884 dbSNP
rs978483084 1887 dbSNP
rs946847195 1888 dbSNP
rs982312522 1890 dbSNP
rs1400750325 1898 dbSNP
rs969955097 1899 dbSNP
rs1263077037 1900 dbSNP
rs1482561027 1901 dbSNP
rs549681003 1907 dbSNP
rs1446776444 1908 dbSNP
rs1452645492 1908 dbSNP
rs915309873 1911 dbSNP
rs989676183 1920 dbSNP
rs1401413808 1922 dbSNP
rs1161368127 1928 dbSNP
rs990019555 1930 dbSNP
rs1465463421 1931 dbSNP
rs963883629 1935 dbSNP
rs1018080882 1939 dbSNP
rs986734590 1940 dbSNP
rs762098289 1945 dbSNP
rs1308095231 1948 dbSNP
rs529441273 1952 dbSNP
rs74678599 1959 dbSNP
rs1008770477 1960 dbSNP
rs1210061797 1967 dbSNP
rs888929242 1980 dbSNP
rs546335954 1985 dbSNP
rs566217955 1987 dbSNP
rs1237870592 1989 dbSNP
rs1470615457 1993 dbSNP
rs1011912289 1995 dbSNP
rs1204738225 2000 dbSNP
rs1423178318 2013 dbSNP
rs895334170 2021 dbSNP
rs564214448 2022 dbSNP
rs1431273882 2023 dbSNP
rs544216244 2038 dbSNP
rs1036368099 2043 dbSNP
rs1003778296 2044 dbSNP
rs149280902 2045 dbSNP
rs1291384098 2057 dbSNP
rs928106704 2060 dbSNP
rs1433524024 2062 dbSNP
rs1223526979 2064 dbSNP
rs1284504800 2067 dbSNP
rs1327635710 2069 dbSNP
rs1042432147 2084 dbSNP
rs1315617344 2087 dbSNP
rs1381243675 2102 dbSNP
rs1365795323 2113 dbSNP
rs1438700599 2115 dbSNP
rs1245131904 2119 dbSNP
rs764248974 2122 dbSNP
rs1422483679 2126 dbSNP
rs915214259 2129 dbSNP
rs1039142277 2130 dbSNP
rs943411186 2136 dbSNP
rs1046897307 2142 dbSNP
rs1168377203 2144 dbSNP
rs1419993892 2145 dbSNP
rs1411412149 2149 dbSNP
rs1476371461 2153 dbSNP
rs1162266920 2158 dbSNP
rs911071344 2183 dbSNP
rs986619067 2184 dbSNP
rs759380154 2186 dbSNP
rs955342515 2209 dbSNP
rs1347984166 2216 dbSNP
rs918491608 2229 dbSNP
rs1240366584 2232 dbSNP
rs1340503759 2239 dbSNP
rs916759466 2241 dbSNP
rs1192582904 2246 dbSNP
rs1358990103 2252 dbSNP
rs972641463 2253 dbSNP
rs561811694 2260 dbSNP
rs567229569 2262 dbSNP
rs1220596962 2263 dbSNP
rs1359104669 2266 dbSNP
rs1476281486 2270 dbSNP
rs1011962827 2274 dbSNP
rs1274182414 2275 dbSNP
rs959099880 2277 dbSNP
rs977147448 2279 dbSNP
rs1035172677 2282 dbSNP
rs967445429 2284 dbSNP
rs1004119079 2295 dbSNP
rs1358082161 2305 dbSNP
rs1418519512 2307 dbSNP
rs902800631 2325 dbSNP
rs548749074 2326 dbSNP
rs10858894 2329 dbSNP
rs1382381712 2330 dbSNP
rs1028850848 2338 dbSNP
rs1304561254 2345 dbSNP
rs1350699010 2351 dbSNP
rs371206002 2353 dbSNP
rs994634605 2355 dbSNP
rs529466600 2363 dbSNP
rs1284924241 2368 dbSNP
rs1364693468 2383 dbSNP
rs1185222362 2390 dbSNP
rs1242319937 2397 dbSNP
rs1444947617 2406 dbSNP
rs1039025210 2411 dbSNP
rs1014843689 2418 dbSNP
rs11834233 2419 dbSNP
rs1158608609 2432 dbSNP
rs1386397303 2433 dbSNP
rs1402939328 2441 dbSNP
rs7306772 2448 dbSNP
rs1050947666 2450 dbSNP
rs1317452003 2452 dbSNP
rs1431564510 2452 dbSNP
rs867642279 2466 dbSNP
rs1280201187 2467 dbSNP
rs1352861802 2470 dbSNP
rs1198669326 2475 dbSNP
rs948152711 2480 dbSNP
rs918386735 2488 dbSNP
rs1207046369 2489 dbSNP
rs1205306671 2491 dbSNP
rs973078952 2493 dbSNP
rs1053896050 2494 dbSNP
rs1436858484 2498 dbSNP
rs1436498536 2499 dbSNP
rs936828646 2502 dbSNP
rs1476716665 2507 dbSNP
rs1171368114 2508 dbSNP
rs1224718312 2513 dbSNP
rs1323560080 2520 dbSNP
rs1470534029 2522 dbSNP
rs760021384 2524 dbSNP
rs557865831 2525 dbSNP
rs1398457817 2527 dbSNP
rs1284682866 2542 dbSNP
rs537829876 2543 dbSNP
rs1329716013 2546 dbSNP
rs1337646417 2562 dbSNP
rs1231102986 2564 dbSNP
rs1282619011 2565 dbSNP
rs12815434 2566 dbSNP
rs1279833175 2570 dbSNP
rs1002595159 2587 dbSNP
rs1255904106 2593 dbSNP
rs1338441755 2594 dbSNP
rs1196019854 2597 dbSNP
rs1252177645 2610 dbSNP
rs1444108564 2618 dbSNP
rs1449399076 2625 dbSNP
rs1198038469 2627 dbSNP
rs555753702 2641 dbSNP
rs536158941 2665 dbSNP
rs1268845219 2666 dbSNP
rs3168593 2668 dbSNP
rs1481045186 2670 dbSNP
rs138267474 2681 dbSNP
rs1328039790 2689 dbSNP
rs1371709159 2692 dbSNP
rs959153233 2702 dbSNP
rs1034726194 2703 dbSNP
rs1398882516 2704 dbSNP
rs987114602 2720 dbSNP
rs1302623221 2725 dbSNP
rs771242821 2733 dbSNP
rs953125673 2733 dbSNP
rs776715413 2744 dbSNP
rs1392874357 2745 dbSNP
rs973259784 2761 dbSNP
rs963186813 2774 dbSNP
rs547209918 2778 dbSNP
rs749675337 2780 dbSNP
rs1014878943 2786 dbSNP
rs540077902 2789 dbSNP
rs1005217503 2790 dbSNP
rs560640712 2793 dbSNP
rs74344051 2794 dbSNP
rs1202269411 2804 dbSNP
rs1012221850 2807 dbSNP
rs895263928 2808 dbSNP
rs1194312054 2812 dbSNP
rs1163699993 2814 dbSNP
rs777348158 2817 dbSNP
rs967285177 2818 dbSNP
rs1163107952 2822 dbSNP
rs1366279208 2826 dbSNP
rs1468904749 2829 dbSNP
rs1426583175 2836 dbSNP
rs1287069058 2837 dbSNP
rs1021102312 2843 dbSNP
rs1053781102 2844 dbSNP
rs1338392568 2853 dbSNP
rs1244802408 2870 dbSNP
rs1011588982 2871 dbSNP
rs550723367 2874 dbSNP
rs1213802921 2876 dbSNP
rs1017642343 2880 dbSNP
rs1042526309 2884 dbSNP
rs1264402386 2887 dbSNP
rs944289104 2892 dbSNP
rs1311175716 2901 dbSNP
rs1183255843 2906 dbSNP
rs912789687 2928 dbSNP
rs987554643 2931 dbSNP
rs543772067 2933 dbSNP
rs890425960 2937 dbSNP
rs769332101 2940 dbSNP
rs747685122 2944 dbSNP
rs929383725 2952 dbSNP
rs1451586942 2956 dbSNP
rs11831532 2957 dbSNP
rs983283070 2963 dbSNP
rs1036851493 2964 dbSNP
rs191346648 2968 dbSNP
rs1384891346 2973 dbSNP
rs528384284 2974 dbSNP
rs754919197 2975 dbSNP
rs1465579222 2976 dbSNP
rs1240394690 2977 dbSNP
rs1262974180 2978 dbSNP
rs1460278427 2979 dbSNP
rs1203407570 2986 dbSNP
rs1244017705 2987 dbSNP
rs1345914145 2998 dbSNP
rs370448846 2999 dbSNP
rs181000222 3001 dbSNP
rs1175612417 3009 dbSNP
rs11379713 3010 dbSNP
rs397779988 3010 dbSNP
rs990481795 3014 dbSNP
rs1469140508 3015 dbSNP
rs559429630 3019 dbSNP
rs1337144514 3020 dbSNP
rs1407921580 3026 dbSNP
rs959363239 3032 dbSNP
rs4589356 3034 dbSNP
rs927595384 3037 dbSNP
rs902557021 3040 dbSNP
rs1290803731 3054 dbSNP
rs1321994167 3063 dbSNP
rs1042967568 3070 dbSNP
rs1184609263 3073 dbSNP
rs1326022030 3074 dbSNP
rs1202694728 3078 dbSNP
rs1446887154 3079 dbSNP
rs1232471539 3083 dbSNP
rs1241835449 3094 dbSNP
rs150468958 3095 dbSNP
rs982290320 3097 dbSNP
rs1178995918 3102 dbSNP
rs765938565 3107 dbSNP
rs966457276 3115 dbSNP
rs564216883 3122 dbSNP
rs1266772708 3130 dbSNP
rs200496386 3139 dbSNP
rs1482614711 3148 dbSNP
rs1177001462 3151 dbSNP
rs1242220611 3152 dbSNP
rs1217404101 3160 dbSNP
rs1314776893 3164 dbSNP
rs1054807 3171 dbSNP
rs989646025 3177 dbSNP
rs958316792 3189 dbSNP
rs1017876475 3192 dbSNP
rs1354730839 3196 dbSNP
rs1007775126 3206 dbSNP
rs931673349 3223 dbSNP
rs921608582 3226 dbSNP
rs758222289 3228 dbSNP
rs1404891161 3229 dbSNP
rs941779922 3232 dbSNP
rs1030302737 3236 dbSNP
rs186098375 3237 dbSNP
rs1272617970 3242 dbSNP
rs1197267901 3243 dbSNP
rs1308299295 3245 dbSNP
rs555732887 3255 dbSNP
rs1395407847 3257 dbSNP
rs994014944 3262 dbSNP
rs10858893 3267 dbSNP
rs917866868 3268 dbSNP
rs1270896954 3286 dbSNP
rs1474331909 3297 dbSNP
rs1185680970 3299 dbSNP
rs1419871056 3301 dbSNP
rs959247842 3308 dbSNP
rs990689421 3308 dbSNP
rs370059373 3310 dbSNP
rs749770463 3319 dbSNP
rs1424696304 3329 dbSNP
rs542697953 3329 dbSNP
rs1428824835 3333 dbSNP
rs1352096140 3338 dbSNP
rs1429148486 3338 dbSNP
rs573471211 3340 dbSNP
rs941188423 3345 dbSNP
rs1363024833 3350 dbSNP
rs1360121494 3355 dbSNP
rs888247189 3357 dbSNP
rs1000797650 3362 dbSNP
rs967208353 3364 dbSNP
rs756333853 3365 dbSNP
rs1291991023 3366 dbSNP
rs1214879505 3374 dbSNP
rs1426915074 3374 dbSNP
rs1242497585 3376 dbSNP
rs1476230138 3377 dbSNP
rs1383799337 3379 dbSNP
rs180924641 3398 dbSNP
rs1429631865 3402 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
CLIP-seq Support 1 for dataset SRR1045082
Method / RBP PAR-CLIP / AGO2
Cell line / Condition MCF7 / Untreated
Location of target site ENST00000529983.2 | 3UTR | CAUUUUCUGAUUGCACUUCCUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24398324 / SRX388831
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
UCEC -0.903 0.14 -1.000 0.5 3 Click to see details
BRCA -0.195 0.15 -0.034 0.43 31 Click to see details
STAD 0.76 0.23 0.500 0.33 3 Click to see details
HNSC -0.132 0.33 0.086 0.39 14 Click to see details
LIHC -0.272 0.36 -0.200 0.4 4 Click to see details
LUSC -0.042 0.44 -0.182 0.26 15 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
BLCA 0.067 0.45 -0.029 0.48 6 Click to see details
80 hsa-miR-2115-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057089 DDIT4 DNA damage inducible transcript 4 2 2
MIRT071216 FCF1 FCF1, rRNA-processing protein 2 2
MIRT226901 RAD23B RAD23 homolog B, nucleotide excision repair protein 2 2
MIRT235961 BACH1 BTB domain and CNC homolog 1 2 2
MIRT294569 ZNF460 zinc finger protein 460 2 4
MIRT321046 RAC1 Rac family small GTPase 1 2 4
MIRT359666 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 8
MIRT366451 KLHL15 kelch like family member 15 2 2
MIRT405375 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT441794 TCEAL5 transcription elongation factor A like 5 2 2
MIRT443295 TCEAL3 transcription elongation factor A like 3 2 2
MIRT455275 DDX39B DExD-box helicase 39B 2 2
MIRT458523 C5orf22 chromosome 5 open reading frame 22 2 2
MIRT464960 TWIST1 twist family bHLH transcription factor 1 2 2
MIRT466848 STX6 syntaxin 6 2 2
MIRT469252 RHOB ras homolog family member B 2 2
MIRT469825 RAB14 RAB14, member RAS oncogene family 2 4
MIRT470047 PTGFRN prostaglandin F2 receptor inhibitor 2 2
MIRT471420 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT472024 NPM1 nucleophosmin 1 2 2
MIRT484156 CENPN centromere protein N 2 2
MIRT485490 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT490462 PROSER2 proline and serine rich 2 2 2
MIRT493069 MTCH1 mitochondrial carrier 1 2 2
MIRT493573 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 8
MIRT494919 NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2 2
MIRT500439 ZMAT3 zinc finger matrin-type 3 2 2
MIRT500931 SRPR SRP receptor alpha subunit 2 4
MIRT501551 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT501809 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT502415 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT506504 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT507861 CCNE2 cyclin E2 2 2
MIRT510511 YOD1 YOD1 deubiquitinase 2 6
MIRT516073 RAB42 RAB42, member RAS oncogene family 2 2
MIRT519030 KYNU kynureninase 2 6
MIRT521762 PPIL1 peptidylprolyl isomerase like 1 2 4
MIRT522898 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 4
MIRT527370 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT530691 C8orf46 chromosome 8 open reading frame 46 2 2
MIRT530867 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT531832 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT533035 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT533165 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT533464 TRIM71 tripartite motif containing 71 2 2
MIRT534331 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT539372 ADSS adenylosuccinate synthase 2 6
MIRT545951 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT553283 TSR1 TSR1, ribosome maturation factor 2 2
MIRT553532 TMEM185B transmembrane protein 185B 2 4
MIRT556480 LIPA lipase A, lysosomal acid type 2 2
MIRT556975 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT557697 GATA6 GATA binding protein 6 2 2
MIRT558901 CCDC58 coiled-coil domain containing 58 2 2
MIRT559224 BLMH bleomycin hydrolase 2 2
MIRT559827 SLPI secretory leukocyte peptidase inhibitor 2 2
MIRT563435 SLC3A2 solute carrier family 3 member 2 2 2
MIRT569270 PCDH11X protocadherin 11 X-linked 2 2
MIRT571386 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572567 AFF1 AF4/FMR2 family member 1 2 2
MIRT610400 AR androgen receptor 2 2
MIRT611058 ZNF621 zinc finger protein 621 2 2
MIRT635118 TMEM233 transmembrane protein 233 2 2
MIRT641617 DEFB118 defensin beta 118 2 2
MIRT642146 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT647295 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT648155 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT652780 TENM3 teneurin transmembrane protein 3 2 2
MIRT657356 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT658718 ELN elastin 2 2
MIRT662441 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT665302 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT699898 RUNX1 runt related transcription factor 1 2 2
MIRT700921 PDS5A PDS5 cohesin associated factor A 2 2
MIRT700992 PDE3A phosphodiesterase 3A 2 2
MIRT707397 DCAF4L1 DDB1 and CUL4 associated factor 4 like 1 2 2
MIRT711895 INSIG2 insulin induced gene 2 2 2
MIRT712072 XRCC5 X-ray repair cross complementing 5 2 2
MIRT716121 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT724470 SMAD2 SMAD family member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2115 Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-mir-2115 Decitabine 451668 approved sensitive tissue (esopheageal cancer)
hsa-miR-2115-3p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2115-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-2115-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2115-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-2115-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2115-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-2115-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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