miRTarBase - #MIRT503195


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pre-miRNA Information
pre-miRNA hsa-mir-3120   
Genomic Coordinates chr1: 172138808 - 172138888
Description Homo sapiens miR-3120 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3120-5p
Sequence 13| CCUGUCUGUGCCUGCUGUACA |33
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 19 1 + 172138838 26449202, 27587585 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26637643 8 COSMIC
COSN31603497 11 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750386761 8 dbSNP
rs760725207 9 dbSNP
rs766486759 10 dbSNP
rs754055278 12 dbSNP
rs755288536 19 dbSNP
rs754726014 21 dbSNP
Putative Targets

Gene Information
Gene Symbol ACVR1B   
Synonyms ACTRIB, ACVRLK4, ALK4, SKR2
Description activin A receptor type 1B
Transcript NM_004302   
Other Transcripts NM_020327 , NM_020328   
Expression
Putative miRNA Targets on ACVR1B
3'UTR of ACVR1B
(miRNA target sites are highlighted)		 
>ACVR1B|NM_004302|3'UTR
   1 CTGCTCCCTCTCTCCACACGGAGCTCCTGGCAGCGAGAACTACGCACAGCTGCCGCGTTGAGCGTACGATGGAGGCCTAC
  81 CTCTCGTTTCTGCCCAGCCCTCTGTGGCCAGGAGCCCTGGCCCGCAAGAGGGACAGAGCCCGGGAGAGACTCGCTCACTC
 161 CCATGTTGGGTTTGAGACAGACACCTTTTCTATTTACCTCCTAATGGCATGGAGACTCTGAGAGCGAATTGTGTGGAGAA
 241 CTCAGTGCCACACCTCGAACTGGTTGTAGTGGGAAGTCCCGCGAAACCCGGTGCATCTGGCACGTGGCCAGGAGCCATGA
 321 CAGGGGCGCTTGGGAGGGGCCGGAGGAACCGAGGTGTTGCCAGTGCTAAGCTGCCCTGAGGGTTTCCTTCGGGGACCAGC
 401 CCACAGCACACCAAGGTGGCCCGGAAGAACCAGAAGTGCAGCCCCTCTCACAGGCAGCTCTGAGCCGCGCTTTCCCCTCC
 481 TCCCTGGGATGGACGCTGCCGGGAGACTGCCAGTGGAGACGGAATCTGCCGCTTTGTCTGTCCAGCCGTGTGTGCATGTG
 561 CCGAGGTGCGTCCCCCGTTGTGCCTGGTTCGTGCCATGCCCTTACACGTGCGTGTGAGTGTGTGTGTGTGTCTGTAGGTG
 641 CGCACTTACCTGCTTGAGCTTTCTGTGCATGTGCAGGTCGGGGGTGTGGTCGTCATGCTGTCCGTGCTTGCTGGTGCCTC
 721 TTTTCAGTAGTGAGCAGCATCTAGTTTCCCTGGTGCCCTTCCCTGGAGGTCTCTCCCTCCCCCAGAGCCCCTCATGCCAC
 801 AGTGGTACTCTGTGTCTGGCAGGCTACTCTGCCCACCCCAGCATCAGCACAGCTCTCCTCCTCCATCTCAGACTGTGGAA
 881 CCAAAGCTGGCCCAGTTGTCCATGACAAAAGAGGCTTTTGGGCCAAAATGTGAGGGTGGTGGGTGGGATGGGCAGGGAAG
 961 GAATCCTGGTGGAAGTCTTGGGTGTTAGTGTCAGCCATGGGAAATGAGCCAGCCCAAGGGCATCATCCTCAGCAGCATCG
1041 AGGAAGGGCCGAGGAATGTGAAGCCAGATCTCGGGACTCAGATTGGAATGTTACATCTGTCTTTCATCTCCCAGATCCTG
1121 GAAACAGCAGTGTATATTTTTGGTGGTGGTGGGTTTGGGGTGGGGAAGGGAAGGGCGGGCAAGGAGTGGGGAGGGAGTCT
1201 GGGGTGGGAGGGAGGCATCTGCATGGGTCTTCTTTTACTGGACTGTCTGATCAGGGTGGAGGGAAGGTGAGAGGTTTGCA
1281 TCCACTTCAGGAGCCCTACTGAAGGGAACAGCCTGAGCCGAACATGTTATTTAACCTGAGTATAGTATTTAACGAAGCCT
1361 AGAAGCACGGCTGTGGGTGGTGATTTGGTCAGCATATCTTAGGTATATAATAACTTTGAAGCCATAACTTTTAACTGGAG
1441 TGGTTTGATTTCTTTTTTTAATTTTATTGGGAGGGTTTGGATTTTAACTTTTTTTAATGTTGTTAAATATTAAGTTTTTG
1521 TAAAAGGAAAACCATCTCTGTGATTACCTCTCAATCTATTTGTTTTTAAAGAAATCCCTAAAAAAAAAAATTATCCAATT
1601 GAACGCACATAGCTCAATCACACTGGAAATGTTTGTCCTTGCACCTGAGCCTGTTCCCACTCAGCAGTGAGAGTTCCTCT
1681 TTGCCCTGAGGCTCAGTCTCTCTCGTATTTTGTCCCCACCCCCAATTCCTTGAGTGGTTTTTGCTCTAGGGCCCTTTCTT
1761 GCACTGTCCAGCTGGTTGTACCCTCTCCAGGCATTTATTCAACAAATGTGGGTGAAGTGCCTGCTGGGTGCCAGGTGCTG
1841 GGAATACATCTGTGGACAAGACATGCTTGGGTCCTACTCCTGGAGCACTGTAAAAAGAGCTGATTCAAGTAAGTAGATGC
1921 CTGTTTTGAGACCAGAAGGTTTCATAATTGGTTCTACGACCCTTTTGAGCCTAGAATTATTGTTCTTATATAAGATCACT
2001 GAAGAAAGAGGAACCCCCACAACCCCCTCCACAAAGAGACCAGGGGCGGGTGATGAGACCTGGGGTTTAGAACCCCAGGT
2081 GAGACCTCAAATCACTGCATTCATTCTGAGCCCCCTTCCTGTCCCCAGGGGAGGTGTATTGTGTATGTAGCCTTAGAGCA
2161 TCTCTGCCTCCAACCCAGCAGTTCTCTGCCAAAGCTTGTGGAGGAGGGAGAGCCCTGTCCCTGCCCTCAGGCTCCCCAGT
2241 GCTCCTGGCCCTTCTATTTATTTGACTGATTATTGCTTCTTTCCTTGCATTAAAGGAGATCTTCCCCTAACCTTTGGGCC
2321 AATTTACTGGCCACTAATTTCGTTTAAATACCATTGTGTCATTGGGGGGACCGTCTTTACCCCTGCTGACCTCCCACCTA
2401 TCCGCCCTGCAGCAGAACCTTGGCGGTTTATAGGTAATGATGGAACTTAGACTCCTCTTCCCAGAGTCACAAGTAGCCTC
2481 TGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTACCCCACACACAG
2561 TCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAGCTCCCACACCCACCTCTGCCACTCTTAACACTAA
2641 GTGAGAGTTGGGGAGAAACTGAAGCCGTGTTTTTGGCCCCCCGAGGCTAACCCTGATCCATAGTGCTACCTGCACCTCTG
2721 GATTCTGGATTCACAGACCAAGTCCAAGCCCGTTCTTACGTCGCCATAAAGGCCCCCGAACGGCATTCTCGGTACTTCTG
2801 TTTGTTTTTGTACATTTTATTAGAAAGGACTGTAAAATAGCCACTTAGACACTTTACCTCTTCAGTATGCAAATGTAAAT
2881 AAATTGTAATATAGGAAATCTTTTGTTTTAATATAAGAATGAGCCTGTCCAATTTCTGCTGTACATTATTAAAAGTTTTA
2961 TTCACAGAG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' acAUGUC---GUCCGUGUCUGUCc 5'
            |:|||   |   |||||:||| 
Target 5' agTGCAGCCCCTCTCACAGGCAGc 3'
 435 - 458 139.00 -21.10
2 
miRNA  3' acaUGUCGUCCG-----UGUCUGUcc 5'
             |:: ::||:     |||||||  
Target 5' cccATGTTGGGTTTGAGACAGACAcc 3'
 160 - 185 126.00 -10.60
3 
miRNA  3' acAUGUCGUCCGU--GUCUGUcc 5'
            || | :|| ||  :|||||  
Target 5' tgTAAAATAGCCACTTAGACAct 3'
 2831 - 2853 121.00 -9.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM8996639 1 COSMIC
COSN17387932 6 COSMIC
COSN30104468 7 COSMIC
COSN30458210 8 COSMIC
COSN26965016 21 COSMIC
COSN24312834 22 COSMIC
COSN26965012 29 COSMIC
COSN31506014 34 COSMIC
COSN30110783 44 COSMIC
COSN13401439 45 COSMIC
COSN30107838 50 COSMIC
COSN30478783 55 COSMIC
COSN20041952 58 COSMIC
COSN26965014 64 COSMIC
COSN30134243 67 COSMIC
COSN30110569 68 COSMIC
COSN31593312 76 COSMIC
COSN31518758 120 COSMIC
COSN30535219 135 COSMIC
COSN25266460 254 COSMIC
COSN31595631 258 COSMIC
COSN29314018 279 COSMIC
COSN31607688 305 COSMIC
COSN7373564 370 COSMIC
COSN26576572 393 COSMIC
COSN31531445 454 COSMIC
COSN26576842 468 COSMIC
COSN1149167 530 COSMIC
COSN20109580 618 COSMIC
COSN29725449 631 COSMIC
COSN28260352 756 COSMIC
COSN30159399 934 COSMIC
COSN26633862 998 COSMIC
COSN16997285 1068 COSMIC
COSN32070985 1199 COSMIC
COSN32071835 1200 COSMIC
COSN26342908 1281 COSMIC
COSN28716293 1368 COSMIC
COSN5323909 1421 COSMIC
COSN19663552 1460 COSMIC
COSN29463386 1470 COSMIC
COSN20109581 1591 COSMIC
COSN30539300 1602 COSMIC
COSN26566319 1706 COSMIC
COSN30539292 1733 COSMIC
COSN31522202 1834 COSMIC
COSN22583367 1874 COSMIC
COSN1576077 1924 COSMIC
COSN31484629 2211 COSMIC
COSN26507658 2249 COSMIC
COSN28795156 2681 COSMIC
COSN31592648 2709 COSMIC
COSN26603572 2779 COSMIC
COSN20092574 2783 COSMIC
COSN26633526 2793 COSMIC
COSN30539284 2801 COSMIC
COSN30539294 2895 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1447924392 6 dbSNP
rs747117488 7 dbSNP
rs771391622 9 dbSNP
rs777163939 11 dbSNP
rs1419438971 15 dbSNP
rs771113125 16 dbSNP
rs1332526838 18 dbSNP
rs554675689 20 dbSNP
rs759798095 21 dbSNP
rs770254158 25 dbSNP
rs775002160 26 dbSNP
rs768456229 28 dbSNP
rs1296493115 29 dbSNP
rs1230139446 31 dbSNP
rs1310611579 33 dbSNP
rs762607630 35 dbSNP
rs763673866 36 dbSNP
rs1276175565 37 dbSNP
rs1441793006 38 dbSNP
rs922698808 39 dbSNP
rs751074293 44 dbSNP
rs761448708 45 dbSNP
rs767536009 49 dbSNP
rs374207385 50 dbSNP
rs1325284457 55 dbSNP
rs1042612134 58 dbSNP
rs1384417623 59 dbSNP
rs911763049 61 dbSNP
rs944774994 64 dbSNP
rs117590601 65 dbSNP
rs900472761 68 dbSNP
rs994846237 69 dbSNP
rs1296363750 76 dbSNP
rs1258058659 79 dbSNP
rs1049303263 80 dbSNP
rs886688170 86 dbSNP
rs1005169530 87 dbSNP
rs939109979 88 dbSNP
rs571355915 94 dbSNP
rs1270896146 96 dbSNP
rs892302728 99 dbSNP
rs576547999 101 dbSNP
rs1003679016 102 dbSNP
rs1429301734 103 dbSNP
rs2641529 109 dbSNP
rs1325898863 110 dbSNP
rs1022162206 115 dbSNP
rs556901003 116 dbSNP
rs768213198 117 dbSNP
rs1476990203 124 dbSNP
rs1392486080 133 dbSNP
rs367752259 142 dbSNP
rs989111267 143 dbSNP
rs866100961 144 dbSNP
rs1460726077 146 dbSNP
rs371160781 153 dbSNP
rs966591158 154 dbSNP
rs1164910825 157 dbSNP
rs1030097522 160 dbSNP
rs746106939 164 dbSNP
rs911696979 182 dbSNP
rs536725405 185 dbSNP
rs975198174 188 dbSNP
rs552923431 193 dbSNP
rs930753944 201 dbSNP
rs761540438 210 dbSNP
rs1335877341 219 dbSNP
rs1292518080 222 dbSNP
rs886465806 226 dbSNP
rs572984682 227 dbSNP
rs112670198 231 dbSNP
rs142051576 235 dbSNP
rs747373867 237 dbSNP
rs907337486 238 dbSNP
rs980435075 239 dbSNP
rs1325461565 241 dbSNP
rs1441985779 243 dbSNP
rs372651451 246 dbSNP
rs1216127265 247 dbSNP
rs1325239719 250 dbSNP
rs140847018 257 dbSNP
rs575567583 258 dbSNP
rs1392771856 262 dbSNP
rs1358666755 263 dbSNP
rs1223287291 266 dbSNP
rs1468610678 268 dbSNP
rs894897872 281 dbSNP
rs187097896 282 dbSNP
rs560840449 283 dbSNP
rs1345787962 284 dbSNP
rs1021904051 290 dbSNP
rs529779440 291 dbSNP
rs978391424 295 dbSNP
rs1018869949 302 dbSNP
rs543738672 304 dbSNP
rs966230848 305 dbSNP
rs1161860110 308 dbSNP
rs891116074 316 dbSNP
rs1373591259 322 dbSNP
rs1431591529 322 dbSNP
rs539244444 322 dbSNP
rs1433278368 323 dbSNP
rs116085211 328 dbSNP
rs1175189885 332 dbSNP
rs368256797 341 dbSNP
rs1469935556 342 dbSNP
rs1253050666 343 dbSNP
rs1207886824 344 dbSNP
rs962809810 351 dbSNP
rs974213567 352 dbSNP
rs1211620505 353 dbSNP
rs1314084290 357 dbSNP
rs1282405894 359 dbSNP
rs1366972037 362 dbSNP
rs921795750 363 dbSNP
rs1417472805 366 dbSNP
rs1372300161 368 dbSNP
rs1288704350 376 dbSNP
rs1023151736 377 dbSNP
rs970300740 379 dbSNP
rs982103688 383 dbSNP
rs1466101537 389 dbSNP
rs559739264 391 dbSNP
rs1432574182 392 dbSNP
rs1282258385 393 dbSNP
rs928943146 399 dbSNP
rs753819486 401 dbSNP
rs1399795542 410 dbSNP
rs939008675 412 dbSNP
rs1184731198 413 dbSNP
rs1474440336 415 dbSNP
rs987796718 416 dbSNP
rs1183009040 417 dbSNP
rs754938248 423 dbSNP
rs907850761 424 dbSNP
rs940713163 445 dbSNP
rs1215190919 448 dbSNP
rs796615390 448 dbSNP
rs1330031925 450 dbSNP
rs764222114 456 dbSNP
rs1046372640 458 dbSNP
rs907456745 461 dbSNP
rs1229930777 465 dbSNP
rs751688943 467 dbSNP
rs528685035 468 dbSNP
rs551637947 469 dbSNP
rs946489846 470 dbSNP
rs1286573298 481 dbSNP
rs1212269841 483 dbSNP
rs1285167191 485 dbSNP
rs1043514379 487 dbSNP
rs1185842091 490 dbSNP
rs921097471 494 dbSNP
rs1242963121 495 dbSNP
rs1426029346 496 dbSNP
rs893334583 499 dbSNP
rs932537747 501 dbSNP
rs1010594235 502 dbSNP
rs1465403517 503 dbSNP
rs891072646 505 dbSNP
rs1250128260 507 dbSNP
rs1212120220 511 dbSNP
rs1445760465 512 dbSNP
rs1022019829 514 dbSNP
rs902152601 519 dbSNP
rs1245284637 521 dbSNP
rs1379020250 522 dbSNP
rs1293371607 523 dbSNP
rs999201783 531 dbSNP
rs1019065639 532 dbSNP
rs995598009 535 dbSNP
rs571618446 537 dbSNP
rs975092715 539 dbSNP
rs1028810049 548 dbSNP
rs1294433112 549 dbSNP
rs1385194135 554 dbSNP
rs1459780755 556 dbSNP
rs1371778774 557 dbSNP
rs147606273 558 dbSNP
rs1450151365 563 dbSNP
rs191146993 564 dbSNP
rs1405152762 567 dbSNP
rs768644044 568 dbSNP
rs1191953476 569 dbSNP
rs1468173498 570 dbSNP
rs1268349881 571 dbSNP
rs866045360 576 dbSNP
rs140531594 577 dbSNP
rs532331827 578 dbSNP
rs1374612453 584 dbSNP
rs962316828 585 dbSNP
rs1204404043 587 dbSNP
rs1036340980 589 dbSNP
rs981466511 591 dbSNP
rs1238356572 592 dbSNP
rs928663520 598 dbSNP
rs1330087713 605 dbSNP
rs1280264675 606 dbSNP
rs937596054 608 dbSNP
rs879717619 609 dbSNP
rs1298084950 610 dbSNP
rs182770711 612 dbSNP
rs967739177 612 dbSNP
rs947571334 613 dbSNP
rs1453889035 614 dbSNP
rs780305832 614 dbSNP
rs140145955 618 dbSNP
rs749342386 618 dbSNP
rs757109100 618 dbSNP
rs921053920 618 dbSNP
rs932462410 618 dbSNP
rs1043415986 620 dbSNP
rs553429265 627 dbSNP
rs1276701932 639 dbSNP
rs999716502 642 dbSNP
rs1256210126 643 dbSNP
rs1040026181 671 dbSNP
rs1462003198 672 dbSNP
rs1205976273 673 dbSNP
rs1235020873 677 dbSNP
rs142195918 680 dbSNP
rs1288073477 681 dbSNP
rs996068891 683 dbSNP
rs1236847452 685 dbSNP
rs912444406 686 dbSNP
rs1028926181 690 dbSNP
rs951824234 700 dbSNP
rs939931746 701 dbSNP
rs151225207 703 dbSNP
rs1434183573 704 dbSNP
rs1403079043 705 dbSNP
rs1014806669 711 dbSNP
rs962146812 720 dbSNP
rs1044867006 721 dbSNP
rs981962803 723 dbSNP
rs558749022 726 dbSNP
rs1035882983 727 dbSNP
rs575632901 728 dbSNP
rs1256297720 733 dbSNP
rs1201707720 737 dbSNP
rs1267119381 738 dbSNP
rs1229326514 755 dbSNP
rs761356852 759 dbSNP
rs1010454855 764 dbSNP
rs1021869785 769 dbSNP
rs756514606 780 dbSNP
rs544497523 782 dbSNP
rs764688093 784 dbSNP
rs1336191069 785 dbSNP
rs1380614928 790 dbSNP
rs772731383 802 dbSNP
rs1388093382 803 dbSNP
rs1160265590 804 dbSNP
rs1457559287 806 dbSNP
rs914827830 808 dbSNP
rs979093800 811 dbSNP
rs947679505 817 dbSNP
rs1472403525 831 dbSNP
rs1369010132 832 dbSNP
rs1188953896 839 dbSNP
rs560901399 841 dbSNP
rs920992857 851 dbSNP
rs1209035290 855 dbSNP
rs953837920 856 dbSNP
rs1228126801 858 dbSNP
rs574365023 864 dbSNP
rs935074374 866 dbSNP
rs1225326901 870 dbSNP
rs1364617526 881 dbSNP
rs1040544106 883 dbSNP
rs901479355 890 dbSNP
rs1437597146 895 dbSNP
rs780355069 898 dbSNP
rs1050297238 903 dbSNP
rs540004129 907 dbSNP
rs1006178551 909 dbSNP
rs1404566921 916 dbSNP
rs1414356605 917 dbSNP
rs1337673263 934 dbSNP
rs1231182782 935 dbSNP
rs919875798 945 dbSNP
rs762528963 952 dbSNP
rs1282814833 959 dbSNP
rs765992029 960 dbSNP
rs1188773295 966 dbSNP
rs962210088 973 dbSNP
rs1254402597 980 dbSNP
rs1225684840 981 dbSNP
rs2854464 998 dbSNP
rs1480587175 1000 dbSNP
rs1036198510 1004 dbSNP
rs905921092 1009 dbSNP
rs1196941297 1018 dbSNP
rs1194636628 1019 dbSNP
rs1341508709 1020 dbSNP
rs1253299374 1024 dbSNP
rs1438974665 1025 dbSNP
rs958700443 1028 dbSNP
rs1298371996 1032 dbSNP
rs140080208 1036 dbSNP
rs1267672386 1041 dbSNP
rs1057475683 1051 dbSNP
rs1435496594 1052 dbSNP
rs1178287035 1064 dbSNP
rs891969659 1068 dbSNP
rs372932639 1073 dbSNP
rs1010392716 1074 dbSNP
rs1021817002 1076 dbSNP
rs1461410889 1077 dbSNP
rs150310204 1089 dbSNP
rs1190327503 1091 dbSNP
rs1478547412 1100 dbSNP
rs532902360 1109 dbSNP
rs1180146695 1123 dbSNP
rs531140203 1132 dbSNP
rs550849512 1136 dbSNP
rs1302660124 1141 dbSNP
rs1000914474 1146 dbSNP
rs924778329 1149 dbSNP
rs1345903502 1150 dbSNP
rs1028001406 1157 dbSNP
rs1407061713 1161 dbSNP
rs1220085449 1162 dbSNP
rs953893090 1163 dbSNP
rs1276356366 1166 dbSNP
rs567600189 1171 dbSNP
rs1349721104 1180 dbSNP
rs1307217506 1183 dbSNP
rs1295715049 1186 dbSNP
rs900181081 1188 dbSNP
rs146448253 1189 dbSNP
rs995834030 1193 dbSNP
rs1267606729 1197 dbSNP
rs1490410285 1201 dbSNP
rs1201209647 1205 dbSNP
rs1259250957 1206 dbSNP
rs1427637527 1210 dbSNP
rs1426854555 1219 dbSNP
rs1157322755 1225 dbSNP
rs1019822547 1226 dbSNP
rs1374680689 1232 dbSNP
rs562506254 1233 dbSNP
rs1253162490 1234 dbSNP
rs1422725256 1241 dbSNP
rs1185050204 1246 dbSNP
rs975821674 1249 dbSNP
rs1482306460 1250 dbSNP
rs961192400 1252 dbSNP
rs923014576 1257 dbSNP
rs1163000237 1258 dbSNP
rs931760201 1262 dbSNP
rs1314101327 1270 dbSNP
rs1282425093 1274 dbSNP
rs1264061952 1275 dbSNP
rs1226339647 1294 dbSNP
rs1050081962 1297 dbSNP
rs1328286708 1299 dbSNP
rs764746940 1301 dbSNP
rs887473142 1309 dbSNP
rs1411625088 1310 dbSNP
rs1376924336 1313 dbSNP
rs1301699738 1319 dbSNP
rs1425492892 1320 dbSNP
rs941910729 1321 dbSNP
rs1296504058 1325 dbSNP
rs931238229 1330 dbSNP
rs1383078500 1333 dbSNP
rs1413225363 1349 dbSNP
rs1298250940 1354 dbSNP
rs1161968540 1355 dbSNP
rs867872931 1362 dbSNP
rs1422544169 1366 dbSNP
rs1036707446 1369 dbSNP
rs897630125 1378 dbSNP
rs2714 1391 dbSNP
rs938727933 1397 dbSNP
rs1208398325 1398 dbSNP
rs566971087 1404 dbSNP
rs1268482952 1405 dbSNP
rs1230027103 1406 dbSNP
rs1057207374 1414 dbSNP
rs1035566834 1417 dbSNP
rs538732203 1419 dbSNP
rs1228391924 1429 dbSNP
rs1380785083 1429 dbSNP
rs1359466210 1436 dbSNP
rs946198694 1445 dbSNP
rs1433961553 1449 dbSNP
rs1043223225 1450 dbSNP
rs1349802037 1462 dbSNP
rs1012982399 1468 dbSNP
rs1166180599 1472 dbSNP
rs1021562610 1474 dbSNP
rs1388440502 1478 dbSNP
rs1188039430 1494 dbSNP
rs1450271110 1496 dbSNP
rs1250149324 1501 dbSNP
rs1206606253 1515 dbSNP
rs1224078120 1516 dbSNP
rs904754606 1518 dbSNP
rs1222280153 1527 dbSNP
rs773015483 1533 dbSNP
rs1485354808 1534 dbSNP
rs1294721704 1537 dbSNP
rs996449268 1540 dbSNP
rs1365405006 1549 dbSNP
rs977671174 1555 dbSNP
rs1367400874 1563 dbSNP
rs1294597658 1579 dbSNP
rs397947585 1580 dbSNP
rs58658295 1580 dbSNP
rs879205074 1580 dbSNP
rs889456720 1581 dbSNP
rs1392242042 1583 dbSNP
rs1008343592 1585 dbSNP
rs542978756 1588 dbSNP
rs1263638126 1599 dbSNP
rs961141112 1604 dbSNP
rs1191577644 1605 dbSNP
rs1490807803 1606 dbSNP
rs1272390184 1610 dbSNP
rs1442681424 1614 dbSNP
rs1032345615 1616 dbSNP
rs1342344982 1616 dbSNP
rs1230672295 1618 dbSNP
rs140942303 1620 dbSNP
rs965533643 1630 dbSNP
rs1026834729 1638 dbSNP
rs1349110398 1646 dbSNP
rs952705175 1647 dbSNP
rs1385788308 1652 dbSNP
rs1372530621 1668 dbSNP
rs980048258 1677 dbSNP
rs1157038642 1680 dbSNP
rs977323630 1686 dbSNP
rs1378457379 1694 dbSNP
rs921478906 1701 dbSNP
rs1176431399 1705 dbSNP
rs79245486 1706 dbSNP
rs1454538726 1708 dbSNP
rs372388093 1714 dbSNP
rs908854626 1722 dbSNP
rs1251990787 1726 dbSNP
rs569056861 1727 dbSNP
rs941690633 1730 dbSNP
rs1036249677 1733 dbSNP
rs1343767256 1745 dbSNP
rs1256240631 1747 dbSNP
rs1225720803 1749 dbSNP
rs374698697 1750 dbSNP
rs1452389964 1752 dbSNP
rs1316267217 1754 dbSNP
rs1385665967 1758 dbSNP
rs913294046 1759 dbSNP
rs946146457 1759 dbSNP
rs1043170668 1763 dbSNP
rs1395527418 1764 dbSNP
rs926125039 1767 dbSNP
rs56228628 1769 dbSNP
rs1304885146 1772 dbSNP
rs1315934106 1800 dbSNP
rs1409548948 1808 dbSNP
rs1158180549 1809 dbSNP
rs1472855502 1810 dbSNP
rs1365470718 1815 dbSNP
rs1050691886 1818 dbSNP
rs1239387537 1822 dbSNP
rs187695305 1824 dbSNP
rs1256415891 1855 dbSNP
rs548125524 1859 dbSNP
rs1463806034 1860 dbSNP
rs1202829092 1861 dbSNP
rs894336491 1863 dbSNP
rs554902190 1874 dbSNP
rs1209778963 1877 dbSNP
rs1021674809 1883 dbSNP
rs1353383451 1885 dbSNP
rs904497293 1894 dbSNP
rs1244137270 1914 dbSNP
rs999263399 1918 dbSNP
rs1031709280 1924 dbSNP
rs966008074 1933 dbSNP
rs1388222142 1935 dbSNP
rs1175523144 1939 dbSNP
rs998477590 1940 dbSNP
rs1401090990 1952 dbSNP
rs1161458151 1954 dbSNP
rs1407434340 1958 dbSNP
rs867445121 1959 dbSNP
rs1184923946 1962 dbSNP
rs1447241195 1963 dbSNP
rs1247035594 1971 dbSNP
rs766193204 1974 dbSNP
rs1161482768 1977 dbSNP
rs1449151298 1977 dbSNP
rs1288340225 1986 dbSNP
rs896880968 1990 dbSNP
rs1357705964 1991 dbSNP
rs1293995712 1996 dbSNP
rs1226283950 1997 dbSNP
rs993927334 2016 dbSNP
rs985849804 2019 dbSNP
rs908970957 2020 dbSNP
rs952575432 2026 dbSNP
rs1001800251 2027 dbSNP
rs1328022353 2028 dbSNP
rs778880023 2032 dbSNP
rs1469576475 2036 dbSNP
rs1034249560 2037 dbSNP
rs373159772 2042 dbSNP
rs1366145649 2043 dbSNP
rs1408916433 2044 dbSNP
rs963038109 2048 dbSNP
rs569299257 2049 dbSNP
rs1295945039 2066 dbSNP
rs1371908514 2071 dbSNP
rs745901141 2076 dbSNP
rs1223853041 2085 dbSNP
rs1289787383 2086 dbSNP
rs1245300224 2089 dbSNP
rs1320996198 2094 dbSNP
rs34570151 2100 dbSNP
rs1368523560 2104 dbSNP
rs1263573314 2106 dbSNP
rs967395151 2108 dbSNP
rs1203096788 2111 dbSNP
rs780315005 2112 dbSNP
rs1341629398 2115 dbSNP
rs144690977 2120 dbSNP
rs978812621 2122 dbSNP
rs1272814504 2123 dbSNP
rs374389862 2125 dbSNP
rs1051056875 2126 dbSNP
rs116684033 2128 dbSNP
rs1407444251 2137 dbSNP
rs368524788 2140 dbSNP
rs944967191 2144 dbSNP
rs113737357 2146 dbSNP
rs545475108 2152 dbSNP
rs565176670 2153 dbSNP
rs1179059897 2158 dbSNP
rs896828777 2165 dbSNP
rs1043082371 2168 dbSNP
rs1266982604 2169 dbSNP
rs1293452614 2177 dbSNP
rs193251441 2182 dbSNP
rs1180699704 2201 dbSNP
rs1480262464 2207 dbSNP
rs1252569160 2209 dbSNP
rs1177566660 2220 dbSNP
rs1206751058 2221 dbSNP
rs1440842127 2223 dbSNP
rs1431994243 2228 dbSNP
rs1408582279 2233 dbSNP
rs1170277594 2234 dbSNP
rs904612051 2235 dbSNP
rs1048167293 2250 dbSNP
rs998984640 2252 dbSNP
rs1285078172 2255 dbSNP
rs1226449562 2258 dbSNP
rs1355655034 2263 dbSNP
rs1349832501 2270 dbSNP
rs373409727 2279 dbSNP
rs1442233726 2284 dbSNP
rs1309368466 2285 dbSNP
rs1053518529 2288 dbSNP
rs901199654 2290 dbSNP
rs571640748 2295 dbSNP
rs998823478 2296 dbSNP
rs1357060498 2305 dbSNP
rs1028592994 2310 dbSNP
rs544352501 2324 dbSNP
rs1431965555 2326 dbSNP
rs954162318 2329 dbSNP
rs1005728445 2332 dbSNP
rs1283669629 2333 dbSNP
rs1017154904 2334 dbSNP
rs963444009 2342 dbSNP
rs1212592550 2343 dbSNP
rs138940486 2353 dbSNP
rs1237112494 2361 dbSNP
rs1204588363 2364 dbSNP
rs1014127121 2365 dbSNP
rs1264731792 2365 dbSNP
rs918892435 2366 dbSNP
rs1307691318 2370 dbSNP
rs1224963398 2371 dbSNP
rs959744284 2373 dbSNP
rs768412818 2374 dbSNP
rs530295281 2388 dbSNP
rs948677917 2391 dbSNP
rs549648107 2399 dbSNP
rs1042862107 2401 dbSNP
rs11169974 2403 dbSNP
rs1271320633 2404 dbSNP
rs953606085 2405 dbSNP
rs185587553 2407 dbSNP
rs532688908 2412 dbSNP
rs1474606507 2419 dbSNP
rs552694991 2425 dbSNP
rs769716694 2426 dbSNP
rs1420817068 2430 dbSNP
rs944902633 2433 dbSNP
rs1053228079 2434 dbSNP
rs1413223928 2438 dbSNP
rs972308815 2441 dbSNP
rs1446604572 2448 dbSNP
rs1412169134 2451 dbSNP
rs901141015 2455 dbSNP
rs998207478 2462 dbSNP
rs1217928151 2474 dbSNP
rs1319879803 2476 dbSNP
rs1288477451 2484 dbSNP
rs1246079935 2487 dbSNP
rs1169932790 2494 dbSNP
rs1049967712 2496 dbSNP
rs890040867 2499 dbSNP
rs1005834475 2500 dbSNP
rs11831802 2503 dbSNP
rs1005088581 2504 dbSNP
rs897338203 2506 dbSNP
rs1291117841 2527 dbSNP
rs188880255 2532 dbSNP
rs1026072111 2537 dbSNP
rs554430650 2542 dbSNP
rs1332494422 2551 dbSNP
rs1349819115 2554 dbSNP
rs750647462 2559 dbSNP
rs1269430794 2575 dbSNP
rs1388546843 2587 dbSNP
rs992450697 2592 dbSNP
rs1427679195 2594 dbSNP
rs1262106549 2598 dbSNP
rs1022619345 2602 dbSNP
rs1362538707 2604 dbSNP
rs1487426622 2604 dbSNP
rs756353664 2614 dbSNP
rs969936639 2617 dbSNP
rs762521781 2627 dbSNP
rs1272000823 2631 dbSNP
rs1226295698 2638 dbSNP
rs1312999844 2643 dbSNP
rs1358732102 2647 dbSNP
rs534870855 2660 dbSNP
rs1298102667 2664 dbSNP
rs925755019 2667 dbSNP
rs780449785 2668 dbSNP
rs1367504158 2670 dbSNP
rs754201220 2674 dbSNP
rs1304355066 2677 dbSNP
rs989270473 2679 dbSNP
rs73102793 2681 dbSNP
rs934104600 2683 dbSNP
rs1049751048 2684 dbSNP
rs192248348 2691 dbSNP
rs895635856 2693 dbSNP
rs1014076123 2696 dbSNP
rs778486676 2710 dbSNP
rs1200105825 2714 dbSNP
rs1490689762 2716 dbSNP
rs1248919905 2719 dbSNP
rs766005934 2723 dbSNP
rs1194762086 2727 dbSNP
rs1182222392 2749 dbSNP
rs796375594 2751 dbSNP
rs184028514 2752 dbSNP
rs867425479 2753 dbSNP
rs1443438269 2760 dbSNP
rs1163693944 2761 dbSNP
rs756190967 2763 dbSNP
rs1392407251 2764 dbSNP
rs1000129374 2774 dbSNP
rs1033440556 2778 dbSNP
rs1398891574 2782 dbSNP
rs994349085 2783 dbSNP
rs986627275 2784 dbSNP
rs1019061203 2785 dbSNP
rs576750874 2790 dbSNP
rs972247021 2791 dbSNP
rs919483436 2792 dbSNP
rs930902443 2794 dbSNP
rs761796970 2799 dbSNP
rs895558547 2800 dbSNP
rs1252197166 2804 dbSNP
rs1198423049 2808 dbSNP
rs1013986458 2811 dbSNP
rs1264102815 2814 dbSNP
rs909548527 2815 dbSNP
rs937058220 2820 dbSNP
rs1022569275 2821 dbSNP
rs1239854515 2822 dbSNP
rs774125122 2824 dbSNP
rs969714265 2828 dbSNP
rs188604828 2833 dbSNP
rs1437031548 2839 dbSNP
rs978621185 2840 dbSNP
rs1032936554 2843 dbSNP
rs1337068482 2847 dbSNP
rs1470868829 2851 dbSNP
rs1041546167 2852 dbSNP
rs1157971393 2856 dbSNP
rs1246773232 2859 dbSNP
rs1364979531 2861 dbSNP
rs555842479 2864 dbSNP
rs1443563198 2868 dbSNP
rs1243389235 2883 dbSNP
rs956029878 2885 dbSNP
rs988661400 2890 dbSNP
rs773036891 2891 dbSNP
rs1284143438 2892 dbSNP
rs1206288110 2901 dbSNP
rs1353491057 2903 dbSNP
rs922463593 2908 dbSNP
rs1286067426 2909 dbSNP
rs536339449 2913 dbSNP
rs889105985 2914 dbSNP
rs934043627 2933 dbSNP
rs1007596074 2939 dbSNP
rs1019426172 2942 dbSNP
rs1324522497 2945 dbSNP
rs1317404920 2946 dbSNP
rs1382672961 2948 dbSNP
rs747607302 2953 dbSNP
rs985558850 2969 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 91.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' acaugucguccgUGUCUGUcc 5'
                      |||||||  
Target 5' ------------ACAGACAcc 3'
 		1 - 9
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
CLIP-seq Support 1 for dataset GSM4903825
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID14_NS
Location of target site NM_004302 | 3UTR | ACAGACACCUUUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000257963.4 | 3UTR | ACAGACACCUUUUCUAUUUACCUCCUAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset SRR1045082
Method / RBP PAR-CLIP / AGO2
Cell line / Condition MCF7 / Untreated
Location of target site ENST00000257963.4 | 3UTR | ACACCUUUUCUAUUUACCUCCUAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24398324 / SRX388831
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
134 hsa-miR-3120-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT096972 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 2 2
MIRT442624 LOX lysyl oxidase 2 2
MIRT473438 MDM4 MDM4, p53 regulator 2 2
MIRT490011 KIFC2 kinesin family member C2 2 2
MIRT496449 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496752 TGIF2 TGFB induced factor homeobox 2 2 2
MIRT497721 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT498287 PADI3 peptidyl arginine deiminase 3 2 2
MIRT503195 ACVR1B activin A receptor type 1B 2 4
MIRT504760 TEP1 telomerase associated protein 1 2 4
MIRT517810 UGDH UDP-glucose 6-dehydrogenase 2 6
MIRT519686 ZNF622 zinc finger protein 622 2 4
MIRT520263 URGCP upregulator of cell proliferation 2 2
MIRT523051 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT525601 OLR1 oxidized low density lipoprotein receptor 1 2 4
MIRT526995 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT528699 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT533142 WNT10A Wnt family member 10A 2 2
MIRT537618 ERI1 exoribonuclease 1 2 2
MIRT539707 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT539752 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT539808 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT539941 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT540424 FAM83F family with sequence similarity 83 member F 2 2
MIRT540509 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540720 GUF1 GUF1 homolog, GTPase 2 2
MIRT541630 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT542286 POLR3K RNA polymerase III subunit K 2 2
MIRT542456 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542550 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542771 PPAP2B phospholipid phosphatase 3 2 2
MIRT550085 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT551458 CARKD NAD(P)HX dehydratase 2 2
MIRT555622 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT569136 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT572328 HSPB6 heat shock protein family B (small) member 6 2 2
MIRT574607 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT575583 Mcm8 minichromosome maintenance 8 homologous recombination repair factor 2 4
MIRT576125 Hrk harakiri, BCL2 interacting protein (contains only BH3 domain) 2 5
MIRT576657 Fam216a family with sequence similarity 216, member A 2 2
MIRT607222 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607292 CD300E CD300e molecule 2 6
MIRT607746 ANGPT4 angiopoietin 4 2 2
MIRT607905 SPRYD4 SPRY domain containing 4 2 2
MIRT608159 HRK harakiri, BCL2 interacting protein 2 7
MIRT608657 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT609115 ZNF703 zinc finger protein 703 2 6
MIRT610231 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT610870 NUDCD3 NudC domain containing 3 2 2
MIRT611217 MC2R melanocortin 2 receptor 2 2
MIRT614858 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT616966 LMX1A LIM homeobox transcription factor 1 alpha 2 2
MIRT617258 GLIPR1L2 GLI pathogenesis related 1 like 2 2 2
MIRT618009 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT619067 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619295 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619348 GINM1 glycoprotein integral membrane 1 2 2
MIRT619362 CFHR5 complement factor H related 5 2 2
MIRT619541 PIWIL2 piwi like RNA-mediated gene silencing 2 2 2
MIRT619782 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT619994 NPAP1 nuclear pore associated protein 1 2 2
MIRT621030 CDC14B cell division cycle 14B 2 2
MIRT622033 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622728 PITPNM3 PITPNM family member 3 2 2
MIRT623144 NAV2 neuron navigator 2 2 2
MIRT623600 IPO9 importin 9 2 2
MIRT624608 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT624905 CTCFL CCCTC-binding factor like 2 2
MIRT625030 SPC24 SPC24, NDC80 kinetochore complex component 2 2
MIRT625688 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 5
MIRT626531 EMCN endomucin 2 2
MIRT627204 ZDHHC20 zinc finger DHHC-type containing 20 2 2
MIRT628033 LSAMP limbic system-associated membrane protein 2 2
MIRT628203 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT631012 LINS lines homolog 1 2 2
MIRT633195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT633890 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT634023 MOB4 MOB family member 4, phocein 2 2
MIRT634416 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT636866 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT642527 ANKRD9 ankyrin repeat domain 9 2 2
MIRT645408 FAM110A family with sequence similarity 110 member A 2 2
MIRT645635 SYTL4 synaptotagmin like 4 2 2
MIRT646013 TNFAIP8L2 TNF alpha induced protein 8 like 2 2 2
MIRT646686 ASGR2 asialoglycoprotein receptor 2 2 2
MIRT652838 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT655156 PHF21B PHD finger protein 21B 2 2
MIRT658491 EXOC7 exocyst complex component 7 2 2
MIRT659398 CORO2A coronin 2A 2 2
MIRT666825 PRCP prolylcarboxypeptidase 2 2
MIRT666866 POU2F2 POU class 2 homeobox 2 2 2
MIRT668224 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT673288 PDE3A phosphodiesterase 3A 2 2
MIRT673878 KLF2 Kruppel like factor 2 2 2
MIRT681721 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT682406 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT684109 MCM10 minichromosome maintenance 10 replication initiation factor 2 2
MIRT684423 TUFT1 tuftelin 1 2 2
MIRT684684 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT686638 TMEM184C transmembrane protein 184C 2 2
MIRT689457 NXN nucleoredoxin 2 2
MIRT689627 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT690773 PLA2G2C phospholipase A2 group IIC 2 2
MIRT690822 SGSM2 small G protein signaling modulator 2 2 2
MIRT693669 MXRA7 matrix remodeling associated 7 2 2
MIRT695553 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT695872 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT698160 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT699933 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT708639 UBE2W ubiquitin conjugating enzyme E2 W 2 2
MIRT710816 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT711242 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT711542 MSH3 mutS homolog 3 2 2
MIRT711749 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712303 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT712922 RPF2 ribosome production factor 2 homolog 2 2
MIRT714027 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714768 TERF1 telomeric repeat binding factor 1 2 2
MIRT714844 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715223 NPVF neuropeptide VF precursor 2 2
MIRT716110 GMPS guanine monophosphate synthase 2 2
MIRT716174 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT716383 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT716527 KSR2 kinase suppressor of ras 2 2 2
MIRT716962 P2RY6 pyrimidinergic receptor P2Y6 2 2
MIRT717605 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717696 PTGS1 prostaglandin-endoperoxide synthase 1 2 2
MIRT721360 ENTHD1 ENTH domain containing 1 2 2
MIRT721381 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721935 RASSF2 Ras association domain family member 2 2 2
MIRT722094 SUSD1 sushi domain containing 1 2 2
MIRT722837 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT722990 TOR1A torsin family 1 member A 2 2
MIRT724174 ABCF2 ATP binding cassette subfamily F member 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3120-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-3120-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-miR-3120-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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