pre-miRNA Information
pre-miRNA hsa-mir-4436b-1   
Genomic Coordinates chr2: 110086433 - 110086523
Description Homo sapiens miR-4436b-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4436b-2   
Genomic Coordinates chr2: 110284853 - 110284943
Description Homo sapiens miR-4436b-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4436b-3p
Sequence 60| CAGGGCAGGAAGAAGUGGACAA |81
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs760150076 9 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol NUP62   
Synonyms IBSN, SNDI, p62
Description nucleoporin 62
Transcript NM_012346   
Other Transcripts NM_016553 , NM_153718 , NM_153719   
Expression
Putative miRNA Targets on NUP62
3'UTR of NUP62
(miRNA target sites are highlighted)
>NUP62|NM_012346|3'UTR
   1 GCGACAGCAGCCCTGGGGCCCGCAGGTCCCTAGGGAGTTCATGAGGGGAATGCGCCCTGTTGTCTGTAGTTTGGGGTTGT
  81 GGCAAGATACTTGTTTGTTTGTTTCTTTCTTTCACATGACTGCCCTTGACATGATCGCTGTGTGCTTTGCGTTTTTCCAT
 161 TTAGGAGGGTATTCTGGGCCTTCTGCCCAGGCAGCAGCCTCATGGGTGTGGCTTCTGTGGCTTTCATTTGAGTATCTTTG
 241 GCCCCTTTTCACCTACTGCGACCACCCACCTCATCCTGGCTCAGCCTGGTGATGGAGAAGTGCTGATGGTCTTGGTCCCA
 321 GCCAGGGTCGTGGGGGCAGCCACTCTCTCCAAAGCATAGTCATAGGTGTCATGAAAAAATACCAAATGTAAGAGAACCTC
 401 CAAGTCAGGGCGCAGTGGCTCACCCCTGTAATCTCAGCACTTTGGGTGGCCAAGGCGGGCAGATGACTTGAGGTCAGGAG
 481 TTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGTCAGGTGTGGTGGACGCCTG
 561 TGATCTCAATCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGTTGCAGTGAACCAAGATCA
 641 CACCACTGCACTCCAGCCTAGGCAACAGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGAAACTCCCAGGAGACAGC
 721 AGCCTAGTTTTCGAGTGTGAGCTTGTGCTTGTGAAAGCTAACCATGCTAACCACCAAGGCAAAGCAGCACAGTGTGAATA
 801 GAACAGAGCGGGATCAAGAATTTCACAGAAGACAGGTCAGCTGAGGGGCCTGCACACACAGGGTGTTGAGGAACCACAGA
 881 TGGGCGCCGAGAGGCCTGCCTTTTGCCTGGCCCAGGCTCACCCCCACCTTGGGCCTCACCTCCTCCAGGAAGCCTTCCCA
 961 GCTACCCGAAGCTCAGGTGGCCTTCTTGCAGGTCCCCGTAGCACCCTGAGCCTGTACCTTGGGTGGCACTTGTTATGCTA
1041 TCCTGTGCTAGCCGTTTGTGCCTCGTCTCGCTGTTAGATTGTGAGTTCCCATGGGCAGAGACCCACTGTCGTTCCCCGTG
1121 TGTCCCCAGCCCGGTCCCTGTCACATTTGTTAAATGAAAGAACAATGAAGCCCAGTGTAACGTCAGTCCACAGAAATAGC
1201 CACAGCTTCCAGTGGTGGCCGTAGACTTGGCTCGGAACTTAGTGGCACCAGAGTAACTCTAGTCAGTTACAGTAAAATCC
1281 ACTGTGTGTGGAAGGCAGAAGCTAGCGGTTGTATCCCAAGCATCTTTTGTATTTGTCTTTATACTTTGCTGAATTCTCTG
1361 AAATACCTATTACTGTATGTTGCTTTTCTAAATAAATGTATTGTGAAACCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaCAGGUGAAGAAG-------GACGGGAc 5'
            ||:: :|||||:       ||||||| 
Target 5' ttGTTTCTTTCTTTCACATGACTGCCCTt 3'
99 - 127 156.00 -17.01
2
miRNA  3' aaCAGGUGA--AGAAGGACGGGac 5'
            || : ||   | |:||||||  
Target 5' ggGTATTCTGGGCCTTCTGCCCag 3'
167 - 190 130.00 -14.30
3
miRNA  3' aacaggugaagaaGGACGGGAc 5'
                       ||||||:| 
Target 5' gggcgccgagaggCCTGCCTTt 3'
882 - 903 129.00 -16.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31495067 25 COSMIC
COSN30134016 33 COSMIC
COSN31519230 40 COSMIC
COSN31583733 41 COSMIC
COSN30538132 82 COSMIC
COSN24107439 134 COSMIC
COSN8261543 453 COSMIC
COSN4778509 839 COSMIC
COSN7447919 849 COSMIC
COSN21570364 889 COSMIC
COSN21621382 1302 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs372281472 2 dbSNP
rs375449846 3 dbSNP
rs765043638 10 dbSNP
rs761632740 15 dbSNP
rs1308346592 19 dbSNP
rs764355720 21 dbSNP
rs760945372 22 dbSNP
rs775435783 23 dbSNP
rs1401400885 30 dbSNP
rs1218592190 33 dbSNP
rs1423869890 39 dbSNP
rs1416667336 40 dbSNP
rs1180647216 41 dbSNP
rs1482975166 46 dbSNP
rs772132592 48 dbSNP
rs906846027 53 dbSNP
rs45540835 54 dbSNP
rs1472067116 56 dbSNP
rs1277439580 65 dbSNP
rs948649371 71 dbSNP
rs532206411 78 dbSNP
rs186001015 79 dbSNP
rs1355200327 83 dbSNP
rs1457811940 90 dbSNP
rs775828349 93 dbSNP
rs955675213 95 dbSNP
rs1486986271 97 dbSNP
rs11547267 101 dbSNP
rs919347451 105 dbSNP
rs975633969 105 dbSNP
rs1017075889 106 dbSNP
rs1006014943 110 dbSNP
rs1160611393 116 dbSNP
rs951878189 129 dbSNP
rs1290271799 130 dbSNP
rs972098514 131 dbSNP
rs1419116523 132 dbSNP
rs145144537 137 dbSNP
rs1402783247 147 dbSNP
rs993551209 148 dbSNP
rs1331938417 149 dbSNP
rs896127652 150 dbSNP
rs745899876 151 dbSNP
rs1350893825 154 dbSNP
rs1379130346 171 dbSNP
rs774427219 179 dbSNP
rs1347750433 181 dbSNP
rs1199183948 189 dbSNP
rs953798627 189 dbSNP
rs1255906795 191 dbSNP
rs1458464204 192 dbSNP
rs1002040433 200 dbSNP
rs560839227 202 dbSNP
rs1465260543 203 dbSNP
rs905035903 208 dbSNP
rs1439201796 210 dbSNP
rs1174334003 213 dbSNP
rs1022507279 215 dbSNP
rs771070946 216 dbSNP
rs1350709603 218 dbSNP
rs1467537130 224 dbSNP
rs1011501113 234 dbSNP
rs892608821 240 dbSNP
rs1401275943 242 dbSNP
rs1031445287 252 dbSNP
rs1333011361 256 dbSNP
rs1403951873 260 dbSNP
rs946852094 263 dbSNP
rs998631479 265 dbSNP
rs1413597495 269 dbSNP
rs1159722278 271 dbSNP
rs141228323 273 dbSNP
rs1319093132 280 dbSNP
rs1200872716 281 dbSNP
rs1045460612 291 dbSNP
rs1176266781 301 dbSNP
rs1480055932 305 dbSNP
rs1191934781 308 dbSNP
rs948372084 308 dbSNP
rs1431474317 313 dbSNP
rs933998689 329 dbSNP
rs181506876 330 dbSNP
rs1403296621 336 dbSNP
rs563111900 337 dbSNP
rs1044276 338 dbSNP
rs11547266 341 dbSNP
rs975666499 343 dbSNP
rs1293711355 344 dbSNP
rs942928991 354 dbSNP
rs910084066 356 dbSNP
rs930489890 358 dbSNP
rs919114656 359 dbSNP
rs1319683430 362 dbSNP
rs9523 364 dbSNP
rs1276709662 381 dbSNP
rs1317609742 383 dbSNP
rs1222631840 397 dbSNP
rs546501513 402 dbSNP
rs1026501227 409 dbSNP
rs374146319 410 dbSNP
rs371234041 411 dbSNP
rs911974511 412 dbSNP
rs986097884 414 dbSNP
rs1195669366 416 dbSNP
rs1034607016 421 dbSNP
rs145149204 424 dbSNP
rs1002113969 425 dbSNP
rs1351224845 427 dbSNP
rs191069827 430 dbSNP
rs989727552 434 dbSNP
rs1360539827 438 dbSNP
rs1349594121 444 dbSNP
rs957162107 445 dbSNP
rs1299229010 447 dbSNP
rs1422009046 452 dbSNP
rs1378984346 456 dbSNP
rs1158620706 457 dbSNP
rs1031206650 459 dbSNP
rs1425327921 460 dbSNP
rs1192508127 461 dbSNP
rs1011177294 463 dbSNP
rs1267867534 465 dbSNP
rs1217089545 468 dbSNP
rs1489176766 470 dbSNP
rs1182223902 473 dbSNP
rs1003708886 480 dbSNP
rs1421698702 482 dbSNP
rs1162457656 483 dbSNP
rs1127729 484 dbSNP
rs1420935947 484 dbSNP
rs1024026271 491 dbSNP
rs1345088320 497 dbSNP
rs1013009560 511 dbSNP
rs894117649 514 dbSNP
rs1049185956 515 dbSNP
rs994793331 533 dbSNP
rs1377357505 534 dbSNP
rs3859440 538 dbSNP
rs1310197473 541 dbSNP
rs1238015450 545 dbSNP
rs1367201268 545 dbSNP
rs901215427 547 dbSNP
rs569495944 548 dbSNP
rs1039719557 551 dbSNP
rs1036192912 552 dbSNP
rs942961208 555 dbSNP
rs910116497 556 dbSNP
rs1182624743 565 dbSNP
rs944503832 567 dbSNP
rs551138336 569 dbSNP
rs538382570 573 dbSNP
rs571314916 574 dbSNP
rs911985770 581 dbSNP
rs1050506535 582 dbSNP
rs972225355 586 dbSNP
rs931996327 587 dbSNP
rs1207677220 603 dbSNP
rs1487644631 604 dbSNP
rs1265050568 608 dbSNP
rs1245675079 611 dbSNP
rs1299786015 612 dbSNP
rs1323569160 613 dbSNP
rs915271551 616 dbSNP
rs759982814 619 dbSNP
rs1314847400 620 dbSNP
rs546317922 622 dbSNP
rs1349744526 623 dbSNP
rs1368308401 624 dbSNP
rs1428201684 624 dbSNP
rs1288786675 631 dbSNP
rs528083527 637 dbSNP
rs1388198139 638 dbSNP
rs1292571966 640 dbSNP
rs1299151247 641 dbSNP
rs1421862671 642 dbSNP
rs1310273591 646 dbSNP
rs771534605 647 dbSNP
rs1351125486 648 dbSNP
rs1156241753 649 dbSNP
rs1472561857 656 dbSNP
rs1413287091 657 dbSNP
rs1458806042 662 dbSNP
rs1176337019 664 dbSNP
rs1231820608 668 dbSNP
rs1184834118 670 dbSNP
rs1374048891 672 dbSNP
rs749721095 673 dbSNP
rs767699595 673 dbSNP
rs778271976 674 dbSNP
rs1175903179 676 dbSNP
rs1415548086 678 dbSNP
rs1267008676 679 dbSNP
rs1210656635 680 dbSNP
rs1489549529 681 dbSNP
rs762042884 681 dbSNP
rs1034678771 682 dbSNP
rs1491035750 682 dbSNP
rs1402830302 686 dbSNP
rs1266342309 688 dbSNP
rs1208144260 691 dbSNP
rs1328444941 692 dbSNP
rs1268667965 693 dbSNP
rs751769989 694 dbSNP
rs989876245 694 dbSNP
rs768263073 695 dbSNP
rs1438679166 696 dbSNP
rs746610162 696 dbSNP
rs61338594 697 dbSNP
rs982282641 698 dbSNP
rs1280097884 699 dbSNP
rs1212332225 701 dbSNP
rs1491369382 701 dbSNP
rs1005012763 702 dbSNP
rs1196407122 702 dbSNP
rs1223121211 702 dbSNP
rs1245540241 702 dbSNP
rs1271823353 702 dbSNP
rs1319653832 702 dbSNP
rs1364976874 702 dbSNP
rs1480402045 702 dbSNP
rs4009637 702 dbSNP
rs5828417 702 dbSNP
rs759363509 702 dbSNP
rs762766968 702 dbSNP
rs764413393 702 dbSNP
rs775167721 702 dbSNP
rs869180975 702 dbSNP
rs1298692166 703 dbSNP
rs373706111 703 dbSNP
rs373724192 704 dbSNP
rs746535490 705 dbSNP
rs1229620226 706 dbSNP
rs1288964838 706 dbSNP
rs1356591956 706 dbSNP
rs749617319 706 dbSNP
rs969005914 706 dbSNP
rs779447445 707 dbSNP
rs1218013768 711 dbSNP
rs1353879572 711 dbSNP
rs1022183549 718 dbSNP
rs1024078223 722 dbSNP
rs1012690905 726 dbSNP
rs370422917 732 dbSNP
rs548884388 733 dbSNP
rs1027356302 739 dbSNP
rs1473907975 740 dbSNP
rs1161616276 742 dbSNP
rs1384723578 746 dbSNP
rs956748879 747 dbSNP
rs994909142 752 dbSNP
rs1030832604 755 dbSNP
rs897750351 764 dbSNP
rs1036204360 765 dbSNP
rs1380367979 766 dbSNP
rs1334792593 768 dbSNP
rs1180117278 769 dbSNP
rs1449815889 773 dbSNP
rs1312396650 777 dbSNP
rs998712024 782 dbSNP
rs1008698909 792 dbSNP
rs1240206709 800 dbSNP
rs1258806142 802 dbSNP
rs890264676 806 dbSNP
rs1050670197 809 dbSNP
rs754991983 810 dbSNP
rs893876691 814 dbSNP
rs751060095 816 dbSNP
rs1251057362 822 dbSNP
rs1053792063 831 dbSNP
rs548980353 839 dbSNP
rs1342676722 840 dbSNP
rs1039748960 842 dbSNP
rs758048701 844 dbSNP
rs1452566180 847 dbSNP
rs1381318322 848 dbSNP
rs1242738105 856 dbSNP
rs982336521 857 dbSNP
rs750088770 858 dbSNP
rs75368221 861 dbSNP
rs151270836 862 dbSNP
rs577315096 868 dbSNP
rs991387540 879 dbSNP
rs1402669534 884 dbSNP
rs1167009635 885 dbSNP
rs1057291496 886 dbSNP
rs565372770 888 dbSNP
rs186984993 889 dbSNP
rs1239001367 893 dbSNP
rs927737722 893 dbSNP
rs973101013 897 dbSNP
rs1202162604 898 dbSNP
rs545044451 911 dbSNP
rs1262815879 917 dbSNP
rs56779488 919 dbSNP
rs1238822844 923 dbSNP
rs142182842 926 dbSNP
rs1008795110 930 dbSNP
rs890361510 935 dbSNP
rs1418528013 941 dbSNP
rs760040332 941 dbSNP
rs1378100606 942 dbSNP
rs1478926584 943 dbSNP
rs1173973810 945 dbSNP
rs8429 946 dbSNP
rs1332911449 947 dbSNP
rs1465822522 947 dbSNP
rs1393723985 949 dbSNP
rs1390293582 950 dbSNP
rs893896823 953 dbSNP
rs1054250123 957 dbSNP
rs1031282729 966 dbSNP
rs1222154279 967 dbSNP
rs538005990 968 dbSNP
rs1444579555 978 dbSNP
rs1358892775 981 dbSNP
rs1264054787 988 dbSNP
rs902537952 997 dbSNP
rs180934958 998 dbSNP
rs1480370757 1002 dbSNP
rs1210508051 1005 dbSNP
rs949649806 1012 dbSNP
rs1018383945 1013 dbSNP
rs539212905 1028 dbSNP
rs916814913 1036 dbSNP
rs888449531 1040 dbSNP
rs571708629 1041 dbSNP
rs1172439243 1042 dbSNP
rs1370956326 1043 dbSNP
rs1461093477 1048 dbSNP
rs931440112 1053 dbSNP
rs994860166 1054 dbSNP
rs897388579 1064 dbSNP
rs140472122 1065 dbSNP
rs938868779 1067 dbSNP
rs147222334 1069 dbSNP
rs1044795143 1070 dbSNP
rs1245723559 1071 dbSNP
rs1267309495 1078 dbSNP
rs45577034 1080 dbSNP
rs1160423407 1082 dbSNP
rs1220198530 1083 dbSNP
rs914926445 1085 dbSNP
rs989149284 1091 dbSNP
rs1014554932 1093 dbSNP
rs1259328938 1102 dbSNP
rs555667842 1104 dbSNP
rs548552246 1108 dbSNP
rs1422190887 1110 dbSNP
rs537044484 1110 dbSNP
rs111373388 1111 dbSNP
rs976636738 1116 dbSNP
rs996055389 1117 dbSNP
rs563598151 1118 dbSNP
rs1032153443 1119 dbSNP
rs1315053797 1121 dbSNP
rs1357441010 1126 dbSNP
rs1222189901 1132 dbSNP
rs11083988 1133 dbSNP
rs1217772263 1139 dbSNP
rs1258770121 1140 dbSNP
rs1485391779 1142 dbSNP
rs533162053 1145 dbSNP
rs1288781059 1148 dbSNP
rs1442312846 1160 dbSNP
rs1027427053 1163 dbSNP
rs902567575 1164 dbSNP
rs143688089 1165 dbSNP
rs1278445974 1166 dbSNP
rs1157508582 1172 dbSNP
rs1344996354 1174 dbSNP
rs897121324 1175 dbSNP
rs1013589990 1176 dbSNP
rs1338994615 1181 dbSNP
rs1035955779 1182 dbSNP
rs895432901 1189 dbSNP
rs1055771034 1195 dbSNP
rs931521699 1197 dbSNP
rs1281033571 1201 dbSNP
rs1310082777 1211 dbSNP
rs1379153639 1218 dbSNP
rs770088909 1220 dbSNP
rs1282034546 1221 dbSNP
rs62126289 1223 dbSNP
rs1210551617 1225 dbSNP
rs1361003417 1233 dbSNP
rs1459712612 1239 dbSNP
rs114164962 1245 dbSNP
rs189025201 1254 dbSNP
rs1238290259 1260 dbSNP
rs1398895092 1261 dbSNP
rs907589509 1265 dbSNP
rs1176039673 1266 dbSNP
rs1384297005 1282 dbSNP
rs534293886 1283 dbSNP
rs1434187099 1284 dbSNP
rs954516048 1298 dbSNP
rs575889617 1306 dbSNP
rs115030648 1307 dbSNP
rs1332233739 1308 dbSNP
rs1356400501 1315 dbSNP
rs975086152 1319 dbSNP
rs1478347369 1322 dbSNP
rs1265816174 1324 dbSNP
rs11547265 1331 dbSNP
rs1215007595 1333 dbSNP
rs545327924 1335 dbSNP
rs1446959669 1337 dbSNP
rs28586965 1342 dbSNP
rs1219676327 1344 dbSNP
rs1200507530 1347 dbSNP
rs1032186441 1348 dbSNP
rs754900634 1356 dbSNP
rs184961731 1366 dbSNP
rs893539738 1369 dbSNP
rs1439090849 1371 dbSNP
rs1201824932 1377 dbSNP
rs1232871398 1379 dbSNP
rs1346554958 1380 dbSNP
rs535947677 1385 dbSNP
rs1194846295 1387 dbSNP
rs566897667 1395 dbSNP
rs1260859348 1399 dbSNP
rs74961846 1410 dbSNP
rs1202170459 1411 dbSNP
rs1427664551 1415 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 23636.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacAGGUGAAGAAG-------GACGGGAc 5'
             |:: :|||||:       ||||||| 
Target 5' ---UUUCUUUCUUUCACAUGACUGCCCUu 3'
1 - 26
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000422090.2 | 3UTR | UUUCUUUCUUUCACAUGACUGCCCUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
87 hsa-miR-4436b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066957 ATXN7L3B ataxin 7 like 3B 2 8
MIRT119284 NABP1 nucleic acid binding protein 1 2 6
MIRT128915 KMT2A lysine methyltransferase 2A 2 2
MIRT150116 MIDN midnolin 2 2
MIRT173040 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT253117 BCL2L12 BCL2 like 12 2 2
MIRT256997 RGMB repulsive guidance molecule family member b 2 2
MIRT259746 SNX12 sorting nexin 12 2 2
MIRT267278 TMEM109 transmembrane protein 109 2 2
MIRT441934 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT443625 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT445757 AGO1 argonaute 1, RISC catalytic component 2 2
MIRT447835 CTIF cap binding complex dependent translation initiation factor 2 2
MIRT451230 ZNF444 zinc finger protein 444 2 2
MIRT451966 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT453127 HOXC4 homeobox C4 2 2
MIRT454604 RPL13A ribosomal protein L13a 2 2
MIRT455176 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455547 GJB1 gap junction protein beta 1 2 2
MIRT458197 ATP6V0A2 ATPase H+ transporting V0 subunit a2 2 2
MIRT458356 NOC2L NOC2 like nucleolar associated transcriptional repressor 2 2
MIRT458923 DNM2 dynamin 2 2 2
MIRT461013 SYT7 synaptotagmin 7 2 2
MIRT461643 ZSWIM4 zinc finger SWIM-type containing 4 2 2
MIRT461997 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT462367 BCL7B BCL tumor suppressor 7B 2 2
MIRT464915 TXNIP thioredoxin interacting protein 2 2
MIRT466311 TIMM22 translocase of inner mitochondrial membrane 22 2 2
MIRT466591 TBC1D2B TBC1 domain family member 2B 2 2
MIRT467045 SRSF1 serine and arginine rich splicing factor 1 2 2
MIRT468750 SDC2 syndecan 2 2 2
MIRT468943 RPS24 ribosomal protein S24 2 2
MIRT469474 REEP5 receptor accessory protein 5 2 2
MIRT469913 PTRF caveolae associated protein 1 2 2
MIRT473325 MEX3A mex-3 RNA binding family member A 2 2
MIRT473643 MARK2 microtubule affinity regulating kinase 2 2 2
MIRT474064 LMNB2 lamin B2 2 2
MIRT474357 KMT2D lysine methyltransferase 2D 2 2
MIRT475394 ICMT isoprenylcysteine carboxyl methyltransferase 2 4
MIRT476335 GLTSCR1L BRD4 interacting chromatin remodeling complex associated protein like 2 2
MIRT478651 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT479585 CDC42SE1 CDC42 small effector 1 2 2
MIRT479943 CBX5 chromobox 5 2 2
MIRT482001 AMOTL2 angiomotin like 2 2 2
MIRT482043 AMER1 APC membrane recruitment protein 1 2 2
MIRT483070 EXT2 exostosin glycosyltransferase 2 2 6
MIRT484323 KCNH1 potassium voltage-gated channel subfamily H member 1 2 4
MIRT487528 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT489636 ALS2CL ALS2 C-terminal like 2 2
MIRT490693 SSTR1 somatostatin receptor 1 2 2
MIRT490871 UPK2 uroplakin 2 2 2
MIRT492582 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT492945 NEUROD2 neuronal differentiation 2 2 2
MIRT498675 SOD2 superoxide dismutase 2 2 4
MIRT499349 RAB25 RAB25, member RAS oncogene family 2 2
MIRT502338 GIGYF1 GRB10 interacting GYF protein 1 2 4
MIRT502976 CCNL1 cyclin L1 2 8
MIRT503706 NUP62 nucleoporin 62 2 2
MIRT505567 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 2 2
MIRT507808 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT513242 FBXO41 F-box protein 41 2 6
MIRT513586 EVX1 even-skipped homeobox 1 2 2
MIRT525036 FRK fyn related Src family tyrosine kinase 2 2
MIRT531035 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT531939 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT534912 PUM2 pumilio RNA binding family member 2 2 2
MIRT535717 N4BP1 NEDD4 binding protein 1 2 2
MIRT540498 ZMAT4 zinc finger matrin-type 4 2 4
MIRT541465 AURKA aurora kinase A 2 2
MIRT554328 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT561572 SLC6A9 solute carrier family 6 member 9 2 2
MIRT564715 ZNF322P1 zinc finger protein 322 pseudogene 1 2 2
MIRT576176 Hmox1 heme oxygenase 1 2 2
MIRT629712 XKR4 XK related 4 2 2
MIRT636182 THBD thrombomodulin 2 2
MIRT646315 MPHOSPH8 M-phase phosphoprotein 8 2 2
MIRT649174 IQSEC1 IQ motif and Sec7 domain 1 2 2
MIRT666945 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT684057 FOLR1 folate receptor 1 2 2
MIRT687585 MAU2 MAU2 sister chromatid cohesion factor 2 2
MIRT689953 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT704071 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT704327 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT705406 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT710488 CDH5 cadherin 5 2 2
MIRT718241 LCE1A late cornified envelope 1A 2 2
MIRT723182 CDCA4 cell division cycle associated 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4436b-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4436b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

Error report submission