miRTarBase - #MIRT504842


—
pre-miRNA Information
pre-miRNA hsa-mir-8055   
Genomic Coordinates chr8: 6622124 - 6622220
Description Homo sapiens miR-8055 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-8055
Sequence 65| CUUUGAGCACAUGAGCAGACGGA |87
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN29106641 21 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1387051240 1 dbSNP
rs773940954 2 dbSNP
rs1007521391 11 dbSNP
rs1425192922 13 dbSNP
rs1168057456 15 dbSNP
rs79123647 20 dbSNP
rs1049046267 21 dbSNP
rs561312343 22 dbSNP
Putative Targets

Gene Information
Gene Symbol HAUS3   
Synonyms C4orf15, IT1, dgt3
Description HAUS augmin like complex subunit 3
Transcript NM_024511   
Expression
Putative miRNA Targets on HAUS3
3'UTR of HAUS3
(miRNA target sites are highlighted)		 
>HAUS3|NM_024511|3'UTR
   1 AAATTACTGAAAACTGAATCTTTATTACGTGTCCTCTTTTATTTATTAGAAGACTGTGTATAATAAACACTACTAAATTT
  81 TTAAAATTTGAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aggcAGACGA-GUACACGAGuuuc 5'
              |:| :| |:||| |||    
Target 5' aatcTTTATTACGTGTCCTCtttt 3'
 17 - 40 75.00 -7.66
2 
miRNA  3' agGCAGACGAGUACACGAGUUUC-------- 5'
            | ||| :|:|| | :| :|||        
Target 5' gtCCTCT-TTTATTTATTAGAAGACTGTGTA 3'
 31 - 60 50.00 -6.26
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30508424 28 COSMIC
COSN20057459 29 COSMIC
COSN31599568 36 COSMIC
COSN31600442 87 COSMIC
COSN30534104 158 COSMIC
COSN17280871 207 COSMIC
COSN26807699 403 COSMIC
COSN2018829 786 COSMIC
COSN2018825 870 COSMIC
COSN24569574 890 COSMIC
COSN21536915 1016 COSMIC
COSN29688827 1444 COSMIC
COSN2018823 1553 COSMIC
COSN24489693 2064 COSMIC
COSN7481185 2458 COSMIC
COSN30160684 2581 COSMIC
COSN31557832 2606 COSMIC
COSN31529480 2637 COSMIC
COSN30182793 2645 COSMIC
COSN5058480 2649 COSMIC
COSN31526587 2675 COSMIC
COSM1173050 2715 COSMIC
COSM4124095 2742 COSMIC
COSM1054528 2743 COSMIC
COSM5717172 2749 COSMIC
COSM7384932 2767 COSMIC
COSM4880671 2804 COSMIC
COSN31583685 2852 COSMIC
COSN31547020 2856 COSMIC
COSN30135960 2865 COSMIC
COSN30120614 2874 COSMIC
COSN30193167 2892 COSMIC
COSN31515263 2894 COSMIC
COSN31577854 2911 COSMIC
COSN30185821 2928 COSMIC
COSN30479633 2937 COSMIC
COSN28871358 2938 COSMIC
COSN9786184 3153 COSMIC
COSN9786183 3445 COSMIC
COSN23701937 3482 COSMIC
COSN9033732 3558 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs767894998 3 dbSNP
rs1294971231 7 dbSNP
rs1307498114 9 dbSNP
rs149512553 14 dbSNP
rs1227434312 17 dbSNP
rs1372306338 18 dbSNP
rs752010548 21 dbSNP
rs758388166 24 dbSNP
rs373634207 25 dbSNP
rs1388136542 27 dbSNP
rs555496567 28 dbSNP
rs371093295 29 dbSNP
rs768466557 31 dbSNP
rs1176503448 32 dbSNP
rs1455550793 33 dbSNP
rs886606702 35 dbSNP
rs1209751206 37 dbSNP
rs750317958 38 dbSNP
rs957506079 39 dbSNP
rs1286412269 41 dbSNP
rs1205994113 43 dbSNP
rs1350182752 45 dbSNP
rs1033162354 48 dbSNP
rs1284361519 48 dbSNP
rs1421531677 58 dbSNP
rs1047890246 60 dbSNP
rs1457155260 68 dbSNP
rs999459668 69 dbSNP
rs1229984891 71 dbSNP
rs562254287 88 dbSNP
rs1314463322 90 dbSNP
rs1338432647 91 dbSNP
rs1039267940 93 dbSNP
rs1279699979 97 dbSNP
rs942388348 106 dbSNP
rs1283497629 110 dbSNP
rs1237306100 111 dbSNP
rs768502633 113 dbSNP
rs1156293843 115 dbSNP
rs1284739366 117 dbSNP
rs1353593776 123 dbSNP
rs1243207240 124 dbSNP
rs1258919991 129 dbSNP
rs1019488051 133 dbSNP
rs1187301563 135 dbSNP
rs1233654373 139 dbSNP
rs910860486 140 dbSNP
rs1156895104 141 dbSNP
rs1008858823 144 dbSNP
rs1379814962 150 dbSNP
rs889122360 151 dbSNP
rs1400045422 156 dbSNP
rs1327222017 163 dbSNP
rs1049602951 170 dbSNP
rs1395176904 171 dbSNP
rs187280449 183 dbSNP
rs755052572 193 dbSNP
rs1392141738 196 dbSNP
rs932589435 202 dbSNP
rs1444191019 205 dbSNP
rs1308112001 215 dbSNP
rs78253267 234 dbSNP
rs1442925511 238 dbSNP
rs988645434 239 dbSNP
rs938500208 242 dbSNP
rs1038191562 253 dbSNP
rs1200240194 257 dbSNP
rs1274194425 259 dbSNP
rs939880940 265 dbSNP
rs1176949810 271 dbSNP
rs970484482 272 dbSNP
rs908282042 280 dbSNP
rs1375843321 283 dbSNP
rs1382174631 287 dbSNP
rs3762940 288 dbSNP
rs949674156 301 dbSNP
rs915599913 314 dbSNP
rs991179247 315 dbSNP
rs957595952 322 dbSNP
rs532732466 330 dbSNP
rs997707053 330 dbSNP
rs1233220359 331 dbSNP
rs1033296125 335 dbSNP
rs1320400024 336 dbSNP
rs901997720 337 dbSNP
rs1223550205 338 dbSNP
rs977615242 342 dbSNP
rs1257596502 343 dbSNP
rs1018286170 348 dbSNP
rs1211708667 350 dbSNP
rs1265421250 366 dbSNP
rs967953757 368 dbSNP
rs570538464 374 dbSNP
rs1425700713 379 dbSNP
rs1018994814 402 dbSNP
rs1476684751 403 dbSNP
rs183516458 404 dbSNP
rs1394758785 410 dbSNP
rs1220155407 433 dbSNP
rs1355236048 437 dbSNP
rs1459160969 449 dbSNP
rs1389324505 451 dbSNP
rs1286036818 455 dbSNP
rs866158204 456 dbSNP
rs889457676 457 dbSNP
rs1278037560 461 dbSNP
rs550422289 462 dbSNP
rs1276227222 463 dbSNP
rs1488162410 465 dbSNP
rs527410261 470 dbSNP
rs1439119331 474 dbSNP
rs78201080 476 dbSNP
rs74655336 478 dbSNP
rs994824600 487 dbSNP
rs764936716 493 dbSNP
rs1332035254 496 dbSNP
rs1323478810 497 dbSNP
rs898407918 501 dbSNP
rs947052999 504 dbSNP
rs1461931294 512 dbSNP
rs1038729950 514 dbSNP
rs1367530309 519 dbSNP
rs1423223642 522 dbSNP
rs939829632 536 dbSNP
rs886956887 537 dbSNP
rs1159993079 540 dbSNP
rs1363000284 543 dbSNP
rs1398737733 545 dbSNP
rs1298147043 547 dbSNP
rs1052792558 554 dbSNP
rs1045463051 560 dbSNP
rs1398163004 561 dbSNP
rs568007610 561 dbSNP
rs767801032 563 dbSNP
rs1240963648 564 dbSNP
rs1406127045 567 dbSNP
rs1351391603 572 dbSNP
rs928467219 572 dbSNP
rs980430882 574 dbSNP
rs3762941 576 dbSNP
rs192232249 577 dbSNP
rs150797006 578 dbSNP
rs1489202920 580 dbSNP
rs984847368 583 dbSNP
rs1159897992 584 dbSNP
rs926188285 585 dbSNP
rs1418599055 589 dbSNP
rs1314598927 593 dbSNP
rs1280377837 600 dbSNP
rs1219379237 601 dbSNP
rs1301530613 602 dbSNP
rs1026428641 604 dbSNP
rs1447862959 617 dbSNP
rs549947862 624 dbSNP
rs533377624 631 dbSNP
rs1374706075 641 dbSNP
rs966219113 643 dbSNP
rs3762942 645 dbSNP
rs1313936024 654 dbSNP
rs1207749971 667 dbSNP
rs1255233555 672 dbSNP
rs1457915742 680 dbSNP
rs1019548746 692 dbSNP
rs1180082833 695 dbSNP
rs904145505 696 dbSNP
rs1193783355 703 dbSNP
rs1022952398 704 dbSNP
rs1435469990 721 dbSNP
rs1174374996 732 dbSNP
rs866732602 740 dbSNP
rs541484507 743 dbSNP
rs1333531212 749 dbSNP
rs1398389287 750 dbSNP
rs1029066083 756 dbSNP
rs560940428 759 dbSNP
rs1415199205 765 dbSNP
rs1424232289 775 dbSNP
rs1369602613 782 dbSNP
rs572460796 785 dbSNP
rs1217453545 786 dbSNP
rs562070652 788 dbSNP
rs116105299 793 dbSNP
rs1318251650 797 dbSNP
rs1263888610 801 dbSNP
rs1349992099 808 dbSNP
rs907036347 812 dbSNP
rs1192848197 813 dbSNP
rs542364038 814 dbSNP
rs1484608974 815 dbSNP
rs948556204 818 dbSNP
rs141380591 821 dbSNP
rs1048994259 822 dbSNP
rs929304002 823 dbSNP
rs919236087 824 dbSNP
rs1173344297 827 dbSNP
rs1465337235 835 dbSNP
rs976167687 839 dbSNP
rs1351639253 855 dbSNP
rs148077850 860 dbSNP
rs539764036 861 dbSNP
rs1260834527 865 dbSNP
rs887056773 867 dbSNP
rs145650052 868 dbSNP
rs1222122526 869 dbSNP
rs1320435963 873 dbSNP
rs1279461200 875 dbSNP
rs368237542 876 dbSNP
rs1341121355 883 dbSNP
rs1045964300 888 dbSNP
rs1220233682 891 dbSNP
rs1214428534 895 dbSNP
rs553693511 902 dbSNP
rs910625666 903 dbSNP
rs1449305010 907 dbSNP
rs1359973558 910 dbSNP
rs1220199836 916 dbSNP
rs1268779044 919 dbSNP
rs1014131300 928 dbSNP
rs986340416 934 dbSNP
rs1196259648 935 dbSNP
rs968610536 935 dbSNP
rs1475303799 942 dbSNP
rs894226782 949 dbSNP
rs1164008078 952 dbSNP
rs1416251363 953 dbSNP
rs1304611975 954 dbSNP
rs188900482 958 dbSNP
rs1361055021 961 dbSNP
rs935620588 977 dbSNP
rs925621205 981 dbSNP
rs1296293810 983 dbSNP
rs955711797 985 dbSNP
rs1448491681 996 dbSNP
rs1285528052 1000 dbSNP
rs1031266169 1013 dbSNP
rs1227236015 1015 dbSNP
rs1002483666 1018 dbSNP
rs1041949479 1029 dbSNP
rs946272298 1033 dbSNP
rs568109583 1034 dbSNP
rs987589436 1043 dbSNP
rs1423985864 1050 dbSNP
rs13434944 1054 dbSNP
rs1044518490 1062 dbSNP
rs921978638 1073 dbSNP
rs1415366023 1076 dbSNP
rs537484906 1089 dbSNP
rs973465750 1090 dbSNP
rs1471956740 1094 dbSNP
rs963389277 1098 dbSNP
rs1015322675 1100 dbSNP
rs887576863 1115 dbSNP
rs1004916565 1116 dbSNP
rs951369650 1118 dbSNP
rs1421629499 1123 dbSNP
rs182850783 1125 dbSNP
rs1384175077 1126 dbSNP
rs550033408 1135 dbSNP
rs1200140277 1143 dbSNP
rs1336004271 1148 dbSNP
rs1049024630 1150 dbSNP
rs1024267950 1151 dbSNP
rs929168168 1152 dbSNP
rs1309561722 1153 dbSNP
rs919267187 1155 dbSNP
rs141997449 1158 dbSNP
rs1259045489 1161 dbSNP
rs564665081 1169 dbSNP
rs138874621 1175 dbSNP
rs894323001 1181 dbSNP
rs1441074145 1189 dbSNP
rs1203230747 1190 dbSNP
rs1055522066 1197 dbSNP
rs527783976 1198 dbSNP
rs999963792 1202 dbSNP
rs562073310 1204 dbSNP
rs542221395 1211 dbSNP
rs904294657 1214 dbSNP
rs1041762785 1215 dbSNP
rs986593497 1216 dbSNP
rs1478336259 1218 dbSNP
rs35095875 1223 dbSNP
rs915372689 1224 dbSNP
rs988362239 1225 dbSNP
rs545286861 1226 dbSNP
rs1402096286 1227 dbSNP
rs1035229826 1228 dbSNP
rs1400786524 1229 dbSNP
rs1022725395 1234 dbSNP
rs746008091 1234 dbSNP
rs912125047 1236 dbSNP
rs1051967631 1245 dbSNP
rs932116407 1246 dbSNP
rs1343234995 1247 dbSNP
rs922124291 1251 dbSNP
rs887619752 1255 dbSNP
rs1258934216 1258 dbSNP
rs1459310040 1259 dbSNP
rs867399461 1265 dbSNP
rs1165385001 1266 dbSNP
rs1249965510 1267 dbSNP
rs973567267 1280 dbSNP
rs963782324 1293 dbSNP
rs878907704 1297 dbSNP
rs1375862553 1301 dbSNP
rs1443555782 1303 dbSNP
rs907988392 1306 dbSNP
rs1180139596 1308 dbSNP
rs897770443 1318 dbSNP
rs1425291259 1320 dbSNP
rs1439875178 1322 dbSNP
rs73796987 1329 dbSNP
rs1297274695 1332 dbSNP
rs1390780733 1337 dbSNP
rs546078623 1339 dbSNP
rs1388018747 1340 dbSNP
rs944738536 1343 dbSNP
rs1177030983 1350 dbSNP
rs1223274214 1356 dbSNP
rs1279274874 1363 dbSNP
rs1479854862 1366 dbSNP
rs1320238297 1367 dbSNP
rs1216973146 1378 dbSNP
rs889093015 1381 dbSNP
rs1050537813 1387 dbSNP
rs774151409 1395 dbSNP
rs1265166150 1398 dbSNP
rs915321910 1400 dbSNP
rs577066119 1407 dbSNP
rs1194088461 1409 dbSNP
rs1476738411 1409 dbSNP
rs762701458 1409 dbSNP
rs1169233155 1420 dbSNP
rs553928856 1425 dbSNP
rs770760298 1431 dbSNP
rs928246401 1432 dbSNP
rs1364217965 1436 dbSNP
rs1242622613 1439 dbSNP
rs1299361705 1441 dbSNP
rs1377973927 1448 dbSNP
rs533786860 1449 dbSNP
rs1380890193 1452 dbSNP
rs748337842 1453 dbSNP
rs1247045948 1454 dbSNP
rs375486796 1454 dbSNP
rs576456125 1454 dbSNP
rs971104242 1454 dbSNP
rs762701995 1459 dbSNP
rs190934118 1461 dbSNP
rs1217200131 1464 dbSNP
rs958503386 1470 dbSNP
rs376449515 1471 dbSNP
rs577544602 1471 dbSNP
rs781459439 1471 dbSNP
rs991262133 1471 dbSNP
rs554273947 1482 dbSNP
rs796696731 1483 dbSNP
rs897634639 1485 dbSNP
rs1018892993 1490 dbSNP
rs755072014 1491 dbSNP
rs1159710607 1502 dbSNP
rs1363017810 1505 dbSNP
rs889131890 1505 dbSNP
rs35866750 1524 dbSNP
rs1288721847 1525 dbSNP
rs1419741223 1527 dbSNP
rs904262848 1535 dbSNP
rs1020070072 1543 dbSNP
rs1010276953 1551 dbSNP
rs1311358632 1553 dbSNP
rs1315130686 1555 dbSNP
rs1214765124 1556 dbSNP
rs893913751 1562 dbSNP
rs1484123883 1563 dbSNP
rs1198328838 1572 dbSNP
rs1179218020 1574 dbSNP
rs1242149190 1598 dbSNP
rs1439711591 1604 dbSNP
rs764857975 1609 dbSNP
rs890134555 1610 dbSNP
rs1051934941 1619 dbSNP
rs1417709606 1620 dbSNP
rs759328512 1620 dbSNP
rs537571909 1622 dbSNP
rs776745479 1623 dbSNP
rs928112115 1637 dbSNP
rs1405704213 1642 dbSNP
rs1447609999 1648 dbSNP
rs568480072 1649 dbSNP
rs77597936 1650 dbSNP
rs1223092106 1652 dbSNP
rs942252861 1655 dbSNP
rs1267340036 1657 dbSNP
rs1218945991 1661 dbSNP
rs948270225 1666 dbSNP
rs1221475300 1670 dbSNP
rs1262105571 1671 dbSNP
rs1457987525 1677 dbSNP
rs1354491798 1683 dbSNP
rs1230628432 1684 dbSNP
rs907914313 1689 dbSNP
rs983565001 1698 dbSNP
rs539699920 1700 dbSNP
rs866827172 1701 dbSNP
rs1313756266 1703 dbSNP
rs1301661524 1707 dbSNP
rs1404292889 1709 dbSNP
rs1343607994 1713 dbSNP
rs1174815102 1714 dbSNP
rs747063363 1716 dbSNP
rs1466378529 1717 dbSNP
rs1333639489 1726 dbSNP
rs1400148808 1731 dbSNP
rs917940202 1737 dbSNP
rs1352793969 1744 dbSNP
rs990840765 1747 dbSNP
rs951680009 1757 dbSNP
rs1383529994 1759 dbSNP
rs1027419609 1760 dbSNP
rs571106123 1763 dbSNP
rs958596314 1764 dbSNP
rs1156456718 1771 dbSNP
rs1282441717 1773 dbSNP
rs1467216424 1777 dbSNP
rs1318362336 1781 dbSNP
rs971784237 1794 dbSNP
rs1270453733 1802 dbSNP
rs185337344 1803 dbSNP
rs1177649025 1804 dbSNP
rs1490996454 1805 dbSNP
rs780570575 1806 dbSNP
rs1480299095 1808 dbSNP
rs1427881237 1811 dbSNP
rs961876882 1817 dbSNP
rs1478368751 1821 dbSNP
rs1447664474 1829 dbSNP
rs879637881 1829 dbSNP
rs1417651358 1838 dbSNP
rs1409437492 1841 dbSNP
rs1019161074 1853 dbSNP
rs547963218 1859 dbSNP
rs968583554 1860 dbSNP
rs758852460 1861 dbSNP
rs1010000229 1862 dbSNP
rs890228547 1870 dbSNP
rs1484337624 1884 dbSNP
rs866387529 1886 dbSNP
rs7693490 1893 dbSNP
rs1228367168 1902 dbSNP
rs1222722311 1905 dbSNP
rs1291470357 1906 dbSNP
rs995833564 1907 dbSNP
rs900760714 1910 dbSNP
rs1339636715 1911 dbSNP
rs140614183 1915 dbSNP
rs1291693232 1938 dbSNP
rs942161394 1952 dbSNP
rs886624307 1954 dbSNP
rs1240569718 1963 dbSNP
rs1219104249 1966 dbSNP
rs375768505 1970 dbSNP
rs1048254349 1974 dbSNP
rs1384991162 1975 dbSNP
rs1325368686 1976 dbSNP
rs867055621 1983 dbSNP
rs949477490 1990 dbSNP
rs1182496608 1991 dbSNP
rs1315559147 1993 dbSNP
rs1397233488 1994 dbSNP
rs1162790409 1998 dbSNP
rs1361156287 2002 dbSNP
rs918033882 2011 dbSNP
rs990809441 2015 dbSNP
rs568657817 2016 dbSNP
rs1344218636 2018 dbSNP
rs927155208 2021 dbSNP
rs368064445 2029 dbSNP
rs1448243882 2031 dbSNP
rs1335653821 2037 dbSNP
rs757766432 2041 dbSNP
rs571906183 2046 dbSNP
rs371229300 2048 dbSNP
rs999525059 2051 dbSNP
rs1314946433 2053 dbSNP
rs6851446 2054 dbSNP
rs1207228845 2057 dbSNP
rs968927403 2058 dbSNP
rs796324164 2066 dbSNP
rs1282657224 2068 dbSNP
rs1173475671 2069 dbSNP
rs1211005483 2070 dbSNP
rs1476000972 2072 dbSNP
rs370405950 2073 dbSNP
rs1183140408 2077 dbSNP
rs989081041 2079 dbSNP
rs763671589 2084 dbSNP
rs1425608268 2087 dbSNP
rs1244038491 2090 dbSNP
rs111250328 2092 dbSNP
rs1406920958 2094 dbSNP
rs1471149658 2094 dbSNP
rs34171758 2094 dbSNP
rs916846080 2094 dbSNP
rs948243869 2094 dbSNP
rs954454358 2096 dbSNP
rs1451271033 2098 dbSNP
rs1203196700 2104 dbSNP
rs1030077300 2108 dbSNP
rs147763407 2109 dbSNP
rs112271834 2116 dbSNP
rs1338709149 2117 dbSNP
rs546266176 2118 dbSNP
rs1016902332 2120 dbSNP
rs1350339711 2122 dbSNP
rs1006494123 2123 dbSNP
rs1265229675 2130 dbSNP
rs886716380 2135 dbSNP
rs1460184159 2143 dbSNP
rs1203092975 2148 dbSNP
rs1246417912 2150 dbSNP
rs1238819301 2152 dbSNP
rs1179483141 2153 dbSNP
rs1340542776 2161 dbSNP
rs144204897 2165 dbSNP
rs1449945709 2166 dbSNP
rs560223503 2167 dbSNP
rs35874601 2177 dbSNP
rs896567039 2186 dbSNP
rs1055218618 2187 dbSNP
rs937960555 2188 dbSNP
rs953223588 2196 dbSNP
rs878968209 2212 dbSNP
rs1396478711 2213 dbSNP
rs1335758099 2214 dbSNP
rs1437594556 2216 dbSNP
rs1285642231 2226 dbSNP
rs1321886248 2231 dbSNP
rs34062934 2232 dbSNP
rs1258950076 2236 dbSNP
rs947313420 2241 dbSNP
rs1341485563 2242 dbSNP
rs181080815 2246 dbSNP
rs988659744 2249 dbSNP
rs954547290 2260 dbSNP
rs759445482 2269 dbSNP
rs922992418 2271 dbSNP
rs1201286344 2273 dbSNP
rs1442964184 2274 dbSNP
rs1480005433 2278 dbSNP
rs1193859016 2285 dbSNP
rs999475750 2290 dbSNP
rs1460022539 2295 dbSNP
rs1166853070 2298 dbSNP
rs974479702 2299 dbSNP
rs79375295 2300 dbSNP
rs964325065 2304 dbSNP
rs142587671 2305 dbSNP
rs1305525593 2306 dbSNP
rs1343958631 2312 dbSNP
rs1015914263 2323 dbSNP
rs1296540458 2324 dbSNP
rs1182313392 2325 dbSNP
rs1436998456 2331 dbSNP
rs543865926 2332 dbSNP
rs950987577 2338 dbSNP
rs1357167862 2343 dbSNP
rs1027020198 2344 dbSNP
rs1013719275 2347 dbSNP
rs1289509181 2350 dbSNP
rs896663576 2351 dbSNP
rs1049122780 2355 dbSNP
rs1055184918 2365 dbSNP
rs1002307537 2374 dbSNP
rs903958722 2375 dbSNP
rs1378708277 2376 dbSNP
rs1368502176 2378 dbSNP
rs1165953450 2379 dbSNP
rs536355396 2384 dbSNP
rs1043727040 2389 dbSNP
rs1036066936 2402 dbSNP
rs575000905 2403 dbSNP
rs1387383245 2405 dbSNP
rs569652964 2405 dbSNP
rs1327450323 2410 dbSNP
rs987211211 2412 dbSNP
rs1388980241 2422 dbSNP
rs1383532359 2425 dbSNP
rs1248337518 2429 dbSNP
rs953354493 2431 dbSNP
rs1358690278 2437 dbSNP
rs945409682 2439 dbSNP
rs558128143 2441 dbSNP
rs566054209 2443 dbSNP
rs190322284 2447 dbSNP
rs1484787333 2450 dbSNP
rs1204113497 2457 dbSNP
rs1382455917 2462 dbSNP
rs1159359664 2470 dbSNP
rs1462263713 2475 dbSNP
rs989366024 2477 dbSNP
rs571102151 2480 dbSNP
rs1030874347 2500 dbSNP
rs749138515 2503 dbSNP
rs1230909299 2504 dbSNP
rs1288450945 2511 dbSNP
rs1407199752 2519 dbSNP
rs1334850047 2525 dbSNP
rs34514922 2525 dbSNP
rs367545679 2525 dbSNP
rs970724059 2527 dbSNP
rs1309059821 2529 dbSNP
rs553923392 2529 dbSNP
rs1012292371 2533 dbSNP
rs1314847836 2533 dbSNP
rs1263371967 2539 dbSNP
rs1325296168 2541 dbSNP
rs1201209837 2543 dbSNP
rs1268062310 2548 dbSNP
rs1219681454 2560 dbSNP
rs554140604 2565 dbSNP
rs1284603117 2566 dbSNP
rs1178216529 2569 dbSNP
rs34512270 2570 dbSNP
rs908988020 2571 dbSNP
rs1253303733 2578 dbSNP
rs1417700592 2582 dbSNP
rs1158886788 2591 dbSNP
rs1222785185 2596 dbSNP
rs1430216825 2597 dbSNP
rs1471049504 2600 dbSNP
rs756220416 2603 dbSNP
rs1405354108 2608 dbSNP
rs1278106334 2611 dbSNP
rs950434931 2612 dbSNP
rs1407114868 2617 dbSNP
rs1390577649 2618 dbSNP
rs1283747362 2623 dbSNP
rs185955462 2628 dbSNP
rs1221265597 2629 dbSNP
rs1037271134 2630 dbSNP
rs1303058240 2631 dbSNP
rs940366506 2632 dbSNP
rs992423723 2635 dbSNP
rs760525724 2650 dbSNP
rs1349251192 2651 dbSNP
rs768792471 2653 dbSNP
rs568518085 2655 dbSNP
rs747062870 2659 dbSNP
rs1489099584 2660 dbSNP
rs1328900998 2670 dbSNP
rs921670193 2671 dbSNP
rs370635645 2672 dbSNP
rs1267532712 2673 dbSNP
rs774177140 2675 dbSNP
rs903934734 2676 dbSNP
rs771000555 2683 dbSNP
rs1436284873 2684 dbSNP
rs1303723186 2685 dbSNP
rs1395454885 2690 dbSNP
rs1171989217 2691 dbSNP
rs1476985802 2700 dbSNP
rs1022805134 2703 dbSNP
rs1193937428 2707 dbSNP
rs368054532 2710 dbSNP
rs1261227484 2724 dbSNP
rs777948944 2725 dbSNP
rs756382662 2726 dbSNP
rs1280046501 2729 dbSNP
rs1292758776 2732 dbSNP
rs150022553 2734 dbSNP
rs1204987690 2736 dbSNP
rs1293152640 2740 dbSNP
rs373878149 2741 dbSNP
rs779977250 2742 dbSNP
rs548803141 2743 dbSNP
rs766829456 2746 dbSNP
rs1339456011 2750 dbSNP
rs1296039956 2756 dbSNP
rs756800343 2759 dbSNP
rs1448945098 2760 dbSNP
rs753451192 2761 dbSNP
rs1052945394 2764 dbSNP
rs959522102 2765 dbSNP
rs1368137211 2767 dbSNP
rs1027051677 2772 dbSNP
rs370285116 2774 dbSNP
rs995701927 2777 dbSNP
rs1421505733 2778 dbSNP
rs201278233 2784 dbSNP
rs139302710 2787 dbSNP
rs775012146 2790 dbSNP
rs746333099 2795 dbSNP
rs112868163 2796 dbSNP
rs144804114 2804 dbSNP
rs1208398756 2811 dbSNP
rs770903378 2812 dbSNP
rs749352621 2813 dbSNP
rs1310019291 2818 dbSNP
rs552589500 2818 dbSNP
rs769865959 2820 dbSNP
rs890126905 2823 dbSNP
rs1275736707 2833 dbSNP
rs771577375 2837 dbSNP
rs369451459 2847 dbSNP
rs755331858 2852 dbSNP
rs1218134063 2856 dbSNP
rs1240594641 2858 dbSNP
rs780592787 2858 dbSNP
rs908921073 2859 dbSNP
rs1445463464 2862 dbSNP
rs1356212451 2868 dbSNP
rs759032524 2870 dbSNP
rs1465024282 2875 dbSNP
rs1184362308 2879 dbSNP
rs1386989009 2892 dbSNP
rs984953241 2892 dbSNP
rs1162619692 2895 dbSNP
rs928958099 2896 dbSNP
rs918943718 2897 dbSNP
rs991847125 2927 dbSNP
rs1283206576 2932 dbSNP
rs532430680 2933 dbSNP
rs560558272 2934 dbSNP
rs1452686055 2935 dbSNP
rs1033971441 2936 dbSNP
rs553992396 2937 dbSNP
rs1379975252 2938 dbSNP
rs923737065 2939 dbSNP
rs978421010 2943 dbSNP
rs1351779246 2945 dbSNP
rs1430070526 2953 dbSNP
rs1343707743 2954 dbSNP
rs1328797990 2957 dbSNP
rs1204571551 2958 dbSNP
rs968630143 2960 dbSNP
rs1245000973 2963 dbSNP
rs1022350722 2966 dbSNP
rs76592500 2972 dbSNP
rs1233441623 2987 dbSNP
rs1471036007 2988 dbSNP
rs35029558 2988 dbSNP
rs1470186352 3001 dbSNP
rs1410736730 3020 dbSNP
rs1404999709 3023 dbSNP
rs1469955629 3024 dbSNP
rs1174204773 3037 dbSNP
rs1178185774 3040 dbSNP
rs892577813 3044 dbSNP
rs1394961988 3046 dbSNP
rs1334072375 3059 dbSNP
rs1336940694 3060 dbSNP
rs959621135 3072 dbSNP
rs1029606742 3082 dbSNP
rs1278097637 3083 dbSNP
rs998176188 3091 dbSNP
rs1224283010 3107 dbSNP
rs1420102295 3118 dbSNP
rs181855947 3122 dbSNP
rs1321485734 3125 dbSNP
rs1474133007 3131 dbSNP
rs560705806 3133 dbSNP
rs1273588531 3142 dbSNP
rs1439538748 3143 dbSNP
rs757641909 3145 dbSNP
rs1462054016 3148 dbSNP
rs1250752949 3151 dbSNP
rs1480644809 3159 dbSNP
rs544051525 3163 dbSNP
rs574987740 3164 dbSNP
rs1426840585 3178 dbSNP
rs1262854375 3189 dbSNP
rs1202365199 3194 dbSNP
rs1309828145 3195 dbSNP
rs961542272 3196 dbSNP
rs1296899491 3203 dbSNP
rs1015738456 3208 dbSNP
rs1285422827 3214 dbSNP
rs558267095 3220 dbSNP
rs919036711 3225 dbSNP
rs1232589141 3227 dbSNP
rs1056140464 3237 dbSNP
rs939002697 3241 dbSNP
rs995884968 3243 dbSNP
rs926827774 3248 dbSNP
rs879042710 3249 dbSNP
rs1000535985 3251 dbSNP
rs902262620 3262 dbSNP
rs1042261079 3263 dbSNP
rs1193493750 3279 dbSNP
rs981444480 3284 dbSNP
rs78282503 3287 dbSNP
rs917867665 3290 dbSNP
rs757806793 3295 dbSNP
rs190547060 3296 dbSNP
rs1169647727 3299 dbSNP
rs1407714632 3301 dbSNP
rs1005700592 3302 dbSNP
rs1290829234 3307 dbSNP
rs1029739400 3308 dbSNP
rs998101552 3311 dbSNP
rs1540287 3316 dbSNP
rs1296777919 3320 dbSNP
rs534178009 3321 dbSNP
rs1443593112 3323 dbSNP
rs367944896 3324 dbSNP
rs1182188596 3325 dbSNP
rs1247871219 3325 dbSNP
rs1289264160 3342 dbSNP
rs755741429 3345 dbSNP
rs868449641 3346 dbSNP
rs1263479353 3365 dbSNP
rs1252477997 3367 dbSNP
rs555191835 3368 dbSNP
rs1187429017 3369 dbSNP
rs1390074920 3371 dbSNP
rs1445711060 3377 dbSNP
rs752440856 3380 dbSNP
rs1049354272 3387 dbSNP
rs61792605 3388 dbSNP
rs897539963 3389 dbSNP
rs1432951108 3400 dbSNP
rs1246761896 3404 dbSNP
rs1056235145 3408 dbSNP
rs1320032802 3409 dbSNP
rs139974254 3410 dbSNP
rs187407586 3413 dbSNP
rs1392988680 3415 dbSNP
rs564784470 3417 dbSNP
rs3762944 3422 dbSNP
rs1262087749 3423 dbSNP
rs1326692578 3426 dbSNP
rs1167144796 3427 dbSNP
rs1243173312 3429 dbSNP
rs1462273687 3431 dbSNP
rs1185906907 3433 dbSNP
rs1254765120 3437 dbSNP
rs1475672174 3441 dbSNP
rs1413270499 3442 dbSNP
rs1180485017 3444 dbSNP
rs566712439 3445 dbSNP
rs915531622 3449 dbSNP
rs1233807787 3451 dbSNP
rs1178621868 3452 dbSNP
rs543977239 3453 dbSNP
rs964354474 3455 dbSNP
rs1456802621 3456 dbSNP
rs988714840 3458 dbSNP
rs1255638596 3460 dbSNP
rs1214956415 3463 dbSNP
rs546979249 3469 dbSNP
rs529945357 3476 dbSNP
rs976815969 3477 dbSNP
rs543279920 3478 dbSNP
rs560890530 3488 dbSNP
rs1301008113 3494 dbSNP
rs1375328011 3502 dbSNP
rs1309683106 3503 dbSNP
rs1391734257 3509 dbSNP
rs1308809836 3510 dbSNP
rs1227322098 3511 dbSNP
rs1348431363 3511 dbSNP
rs1263390449 3513 dbSNP
rs1488167220 3519 dbSNP
rs1445993680 3527 dbSNP
rs1325058937 3529 dbSNP
rs1207498813 3530 dbSNP
rs75901908 3531 dbSNP
rs576608318 3532 dbSNP
rs1308728701 3533 dbSNP
rs1349369714 3537 dbSNP
rs1163025185 3538 dbSNP
rs1402646599 3541 dbSNP
rs1430326433 3551 dbSNP
rs1233370346 3552 dbSNP
rs1174102061 3553 dbSNP
rs1313491994 3554 dbSNP
rs1293314164 3556 dbSNP
rs1409230111 3557 dbSNP
rs1411816513 3558 dbSNP
rs1438405587 3559 dbSNP
rs1283527988 3579 dbSNP
rs1299484497 3579 dbSNP
rs1299816515 3579 dbSNP
rs1299931580 3579 dbSNP
rs1347055207 3579 dbSNP
rs1409051334 3579 dbSNP
rs531222767 3579 dbSNP
rs902293838 3579 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aggcAGACGAGUACACGAGUuuc 5'
              |||||     ||||||   
Target 5' aaauUCUGC-----UGCUCA--- 3'
 		8 - 22
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 79441.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 79441.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000243706.4 | 3UTR | UCAAAUAAAAUUCUGCUGCUCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000243706.4 | 3UTR | UCAAAUAAAAUUCUGCUGCUCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000243706.4 | 3UTR | UCAAAUAAAAUUCUGCUGCUCAAAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000243706.4 | 3UTR | UCAAAUAAAAUUCUGCUGCUCAAAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000243706.4 | 3UTR | UCAAAUAAAAUUCUGCUGCUCAAAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
192 hsa-miR-8055 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT104178 PHTF2 putative homeodomain transcription factor 2 2 6
MIRT109489 KLHL15 kelch like family member 15 2 2
MIRT138601 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT207609 COX5B cytochrome c oxidase subunit 5B 2 2
MIRT246311 HIST2H2AA3 histone cluster 2 H2A family member a3 2 4
MIRT246323 HIST2H2AA4 histone cluster 2 H2A family member a4 2 4
MIRT267508 FEN1 flap structure-specific endonuclease 1 2 2
MIRT271002 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT378038 SMAD5 SMAD family member 5 2 4
MIRT442382 CLVS2 clavesin 2 2 2
MIRT443996 METRN meteorin, glial cell differentiation regulator 2 4
MIRT444222 TMEM136 transmembrane protein 136 2 2
MIRT445870 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT463214 ZNF131 zinc finger protein 131 2 2
MIRT464523 UBXN2B UBX domain protein 2B 2 2
MIRT471509 PCGF3 polycomb group ring finger 3 2 6
MIRT474035 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT481566 ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 2 2
MIRT485415 LZIC leucine zipper and CTNNBIP1 domain containing 2 8
MIRT485724 CALM2 calmodulin 2 2 2
MIRT500745 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT502790 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 6
MIRT503164 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT504842 HAUS3 HAUS augmin like complex subunit 3 2 6
MIRT506559 MNX1 motor neuron and pancreas homeobox 1 2 4
MIRT511372 IKZF3 IKAROS family zinc finger 3 2 6
MIRT522117 NUDT3 nudix hydrolase 3 2 4
MIRT523755 FBXO27 F-box protein 27 2 4
MIRT525160 PGPEP1 pyroglutamyl-peptidase I 2 4
MIRT537294 FZD5 frizzled class receptor 5 2 2
MIRT537493 FAM168B family with sequence similarity 168 member B 2 2
MIRT538375 CRIM1 cysteine rich transmembrane BMP regulator 1 2 2
MIRT539394 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT544124 PPIL1 peptidylprolyl isomerase like 1 2 2
MIRT547269 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT548034 GOLIM4 golgi integral membrane protein 4 2 2
MIRT551641 CCDC127 coiled-coil domain containing 127 2 2
MIRT552585 ZCCHC9 zinc finger CCHC-type containing 9 2 2
MIRT552605 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT554174 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT556914 IRF2BP2 interferon regulatory factor 2 binding protein 2 2 2
MIRT564288 MED26 mediator complex subunit 26 2 2
MIRT571375 TTPAL alpha tocopherol transfer protein like 2 4
MIRT572009 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT572339 CKAP2L cytoskeleton associated protein 2 like 2 4
MIRT572612 CNTLN centlein 2 2
MIRT572779 ZNF277 zinc finger protein 277 2 2
MIRT573258 DCAF10 DDB1 and CUL4 associated factor 10 2 2
MIRT573353 PDE3A phosphodiesterase 3A 2 4
MIRT573362 MAP2K6 mitogen-activated protein kinase kinase 6 2 2
MIRT574194 LMNB1 lamin B1 2 2
MIRT574453 RPS16 ribosomal protein S16 2 2
MIRT574849 C12orf73 chromosome 12 open reading frame 73 2 2
MIRT575356 Zxda zinc finger, X-linked, duplicated A 2 3
MIRT612192 CCDC77 coiled-coil domain containing 77 2 2
MIRT612974 GGCX gamma-glutamyl carboxylase 2 2
MIRT613749 UNKL unkempt family like zinc finger 2 2
MIRT614085 PDE4C phosphodiesterase 4C 2 2
MIRT614405 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT614441 WDR92 WD repeat domain 92 2 2
MIRT614518 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT614653 NIPAL3 NIPA like domain containing 3 2 2
MIRT614720 TEAD3 TEA domain transcription factor 3 2 2
MIRT615556 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT616636 LRAT lecithin retinol acyltransferase 2 4
MIRT617210 CERS4 ceramide synthase 4 2 2
MIRT618934 SF3A3 splicing factor 3a subunit 3 2 2
MIRT619995 C1orf64 steroid receptor associated and regulated protein 2 2
MIRT620819 MKI67IP nucleolar protein interacting with the FHA domain of MKI67 1 1
MIRT621254 PDZD2 PDZ domain containing 2 2 2
MIRT622307 SETD5 SET domain containing 5 2 2
MIRT623324 MAN1C1 mannosidase alpha class 1C member 1 2 2
MIRT625066 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 2
MIRT625443 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT626182 SRFBP1 serum response factor binding protein 1 2 2
MIRT626701 TRIM65 tripartite motif containing 65 2 2
MIRT628925 TBRG4 transforming growth factor beta regulator 4 2 2
MIRT630883 SLC25A33 solute carrier family 25 member 33 2 2
MIRT631653 BRI3BP BRI3 binding protein 2 2
MIRT631696 C1QTNF6 C1q and TNF related 6 2 2
MIRT632864 GSPT1 G1 to S phase transition 1 2 2
MIRT635185 NFKBID NFKB inhibitor delta 2 2
MIRT636917 ZNF845 zinc finger protein 845 2 2
MIRT637048 RAB27A RAB27A, member RAS oncogene family 2 2
MIRT637599 ZNF554 zinc finger protein 554 2 2
MIRT638204 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT638839 CPE carboxypeptidase E 2 2
MIRT639005 ACO1 aconitase 1 2 2
MIRT640894 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT641402 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT642083 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT643179 HYPK huntingtin interacting protein K 2 2
MIRT644205 CBS cystathionine-beta-synthase 2 2
MIRT645453 ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 2 2
MIRT645797 OMA1 OMA1 zinc metallopeptidase 2 2
MIRT645960 TTF2 transcription termination factor 2 2 2
MIRT646334 CLIC6 chloride intracellular channel 6 2 2
MIRT646484 APBB3 amyloid beta precursor protein binding family B member 3 2 2
MIRT646611 SMOC2 SPARC related modular calcium binding 2 2 2
MIRT649392 SH2D4A SH2 domain containing 4A 2 2
MIRT650540 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT650679 CD82 CD82 molecule 2 2
MIRT652118 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT652588 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT654807 PPT1 palmitoyl-protein thioesterase 1 2 2
MIRT655318 PCYOX1 prenylcysteine oxidase 1 2 2
MIRT655411 PAN2 PAN2 poly(A) specific ribonuclease subunit 2 2
MIRT659671 CD86 CD86 molecule 2 2
MIRT660190 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT660883 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT661695 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT661765 BIVM basic, immunoglobulin-like variable motif containing 2 2
MIRT662787 TBC1D25 TBC1 domain family member 25 2 2
MIRT663733 ZNF285 zinc finger protein 285 2 2
MIRT663787 DDX53 DEAD-box helicase 53 2 2
MIRT664663 IMPA2 inositol monophosphatase 2 2 2
MIRT665702 TMX4 thioredoxin related transmembrane protein 4 2 2
MIRT667444 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT667946 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT668776 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT669824 ISCA2 iron-sulfur cluster assembly 2 2 2
MIRT670398 ZXDA zinc finger, X-linked, duplicated A 2 3
MIRT670402 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671112 ZNF573 zinc finger protein 573 2 2
MIRT671129 CD226 CD226 molecule 2 2
MIRT671145 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671315 ACTR1A ARP1 actin related protein 1 homolog A 2 2
MIRT671329 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671857 ZNF429 zinc finger protein 429 2 2
MIRT672009 PXMP4 peroxisomal membrane protein 4 2 2
MIRT672054 KIAA0930 KIAA0930 2 2
MIRT672466 RTTN rotatin 2 2
MIRT672642 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672660 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672755 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672839 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT672917 LRRC2 leucine rich repeat containing 2 2 2
MIRT672983 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT673051 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT673078 AK1 adenylate kinase 1 2 2
MIRT673143 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673303 UBE2G2 ubiquitin conjugating enzyme E2 G2 2 2
MIRT673319 THAP1 THAP domain containing 1 2 2
MIRT673339 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673554 PLA2G16 phospholipase A2 group XVI 2 2
MIRT673656 ZNF440 zinc finger protein 440 2 2
MIRT673693 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT673720 EMCN endomucin 2 2
MIRT673840 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT673869 KLF2 Kruppel like factor 2 2 2
MIRT673888 DCTN6 dynactin subunit 6 2 2
MIRT674180 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT674579 SLC35B4 solute carrier family 35 member B4 2 2
MIRT674604 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT674737 SLC16A1 solute carrier family 16 member 1 2 2
MIRT674824 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT674993 STRN3 striatin 3 2 2
MIRT675058 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675072 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675116 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT675158 YARS2 tyrosyl-tRNA synthetase 2 2 2
MIRT675254 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT675434 LEAP2 liver enriched antimicrobial peptide 2 2 2
MIRT675687 PIWIL1 piwi like RNA-mediated gene silencing 1 2 2
MIRT675772 YIPF4 Yip1 domain family member 4 2 2
MIRT675883 SNAP29 synaptosome associated protein 29 2 2
MIRT677923 SLC35E1 solute carrier family 35 member E1 2 2
MIRT678991 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT679010 MTMR10 myotubularin related protein 10 2 2
MIRT679024 ZNF419 zinc finger protein 419 2 2
MIRT679392 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT679407 GMCL1 germ cell-less, spermatogenesis associated 1 2 2
MIRT683745 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT689266 ZNF99 zinc finger protein 99 2 2
MIRT690502 MDM2 MDM2 proto-oncogene 2 2
MIRT700939 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT702073 PCDHB11 protocadherin beta 11 2 2
MIRT705020 CALU calumenin 2 2
MIRT706196 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706253 MKLN1 muskelin 1 2 2
MIRT706540 GJD2 gap junction protein delta 2 2 2
MIRT707358 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT707407 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710638 GLUL glutamate-ammonia ligase 2 2
MIRT714213 C10orf71 chromosome 10 open reading frame 71 2 2
MIRT715646 USP6NL USP6 N-terminal like 2 2
MIRT717751 KCNRG potassium channel regulator 2 2
MIRT720793 GCH1 GTP cyclohydrolase 1 2 2
MIRT722254 POLQ DNA polymerase theta 2 2
MIRT723765 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT724965 TNS1 tensin 1 2 2
MIRT736568 TP53INP1 tumor protein p53 inducible nuclear protein 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-8055 Cisplatin 5460033 NSC119875 approved sensitive cell line (CP20)

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