>HAUS3|NM_024511|3'UTR
   1 AAATTACTGAAAACTGAATCTTTATTACGTGTCCTCTTTTATTTATTAGAAGACTGTGTATAATAAACACTACTAAATTT
  81 TTAAAATTTGAAAAAAAAAAAAAAAAA

Mutant ID	Mutant Position	Mutant Source
COSN30508424	28	COSMIC
COSN20057459	29	COSMIC
COSN31599568	36	COSMIC
COSN31600442	87	COSMIC
COSN30534104	158	COSMIC
COSN17280871	207	COSMIC
COSN26807699	403	COSMIC
COSN2018829	786	COSMIC
COSN2018825	870	COSMIC
COSN24569574	890	COSMIC
COSN21536915	1016	COSMIC
COSN29688827	1444	COSMIC
COSN2018823	1553	COSMIC
COSN24489693	2064	COSMIC
COSN7481185	2458	COSMIC
COSN30160684	2581	COSMIC
COSN31557832	2606	COSMIC
COSN31529480	2637	COSMIC
COSN30182793	2645	COSMIC
COSN5058480	2649	COSMIC
COSN31526587	2675	COSMIC
COSM1173050	2715	COSMIC
COSM4124095	2742	COSMIC
COSM1054528	2743	COSMIC
COSM5717172	2749	COSMIC
COSM7384932	2767	COSMIC
COSM4880671	2804	COSMIC
COSN31583685	2852	COSMIC
COSN31547020	2856	COSMIC
COSN30135960	2865	COSMIC
COSN30120614	2874	COSMIC
COSN30193167	2892	COSMIC
COSN31515263	2894	COSMIC
COSN31577854	2911	COSMIC
COSN30185821	2928	COSMIC
COSN30479633	2937	COSMIC
COSN28871358	2938	COSMIC
COSN9786184	3153	COSMIC
COSN9786183	3445	COSMIC
COSN23701937	3482	COSMIC
COSN9033732	3558	COSMIC

Mutant ID	Mutant Position	Mutant Source
rs767894998	3	dbSNP
rs1294971231	7	dbSNP
rs1307498114	9	dbSNP
rs149512553	14	dbSNP
rs1227434312	17	dbSNP
rs1372306338	18	dbSNP
rs752010548	21	dbSNP
rs758388166	24	dbSNP
rs373634207	25	dbSNP
rs1388136542	27	dbSNP
rs555496567	28	dbSNP
rs371093295	29	dbSNP
rs768466557	31	dbSNP
rs1176503448	32	dbSNP
rs1455550793	33	dbSNP
rs886606702	35	dbSNP
rs1209751206	37	dbSNP
rs750317958	38	dbSNP
rs957506079	39	dbSNP
rs1286412269	41	dbSNP
rs1205994113	43	dbSNP
rs1350182752	45	dbSNP
rs1033162354	48	dbSNP
rs1284361519	48	dbSNP
rs1421531677	58	dbSNP
rs1047890246	60	dbSNP
rs1457155260	68	dbSNP
rs999459668	69	dbSNP
rs1229984891	71	dbSNP
rs562254287	88	dbSNP
rs1314463322	90	dbSNP
rs1338432647	91	dbSNP
rs1039267940	93	dbSNP
rs1279699979	97	dbSNP
rs942388348	106	dbSNP
rs1283497629	110	dbSNP
rs1237306100	111	dbSNP
rs768502633	113	dbSNP
rs1156293843	115	dbSNP
rs1284739366	117	dbSNP
rs1353593776	123	dbSNP
rs1243207240	124	dbSNP
rs1258919991	129	dbSNP
rs1019488051	133	dbSNP
rs1187301563	135	dbSNP
rs1233654373	139	dbSNP
rs910860486	140	dbSNP
rs1156895104	141	dbSNP
rs1008858823	144	dbSNP
rs1379814962	150	dbSNP
rs889122360	151	dbSNP
rs1400045422	156	dbSNP
rs1327222017	163	dbSNP
rs1049602951	170	dbSNP
rs1395176904	171	dbSNP
rs187280449	183	dbSNP
rs755052572	193	dbSNP
rs1392141738	196	dbSNP
rs932589435	202	dbSNP
rs1444191019	205	dbSNP
rs1308112001	215	dbSNP
rs78253267	234	dbSNP
rs1442925511	238	dbSNP
rs988645434	239	dbSNP
rs938500208	242	dbSNP
rs1038191562	253	dbSNP
rs1200240194	257	dbSNP
rs1274194425	259	dbSNP
rs939880940	265	dbSNP
rs1176949810	271	dbSNP
rs970484482	272	dbSNP
rs908282042	280	dbSNP
rs1375843321	283	dbSNP
rs1382174631	287	dbSNP
rs3762940	288	dbSNP
rs949674156	301	dbSNP
rs915599913	314	dbSNP
rs991179247	315	dbSNP
rs957595952	322	dbSNP
rs532732466	330	dbSNP
rs997707053	330	dbSNP
rs1233220359	331	dbSNP
rs1033296125	335	dbSNP
rs1320400024	336	dbSNP
rs901997720	337	dbSNP
rs1223550205	338	dbSNP
rs977615242	342	dbSNP
rs1257596502	343	dbSNP
rs1018286170	348	dbSNP
rs1211708667	350	dbSNP
rs1265421250	366	dbSNP
rs967953757	368	dbSNP
rs570538464	374	dbSNP
rs1425700713	379	dbSNP
rs1018994814	402	dbSNP
rs1476684751	403	dbSNP
rs183516458	404	dbSNP
rs1394758785	410	dbSNP
rs1220155407	433	dbSNP
rs1355236048	437	dbSNP
rs1459160969	449	dbSNP
rs1389324505	451	dbSNP
rs1286036818	455	dbSNP
rs866158204	456	dbSNP
rs889457676	457	dbSNP
rs1278037560	461	dbSNP
rs550422289	462	dbSNP
rs1276227222	463	dbSNP
rs1488162410	465	dbSNP
rs527410261	470	dbSNP
rs1439119331	474	dbSNP
rs78201080	476	dbSNP
rs74655336	478	dbSNP
rs994824600	487	dbSNP
rs764936716	493	dbSNP
rs1332035254	496	dbSNP
rs1323478810	497	dbSNP
rs898407918	501	dbSNP
rs947052999	504	dbSNP
rs1461931294	512	dbSNP
rs1038729950	514	dbSNP
rs1367530309	519	dbSNP
rs1423223642	522	dbSNP
rs939829632	536	dbSNP
rs886956887	537	dbSNP
rs1159993079	540	dbSNP
rs1363000284	543	dbSNP
rs1398737733	545	dbSNP
rs1298147043	547	dbSNP
rs1052792558	554	dbSNP
rs1045463051	560	dbSNP
rs1398163004	561	dbSNP
rs568007610	561	dbSNP
rs767801032	563	dbSNP
rs1240963648	564	dbSNP
rs1406127045	567	dbSNP
rs1351391603	572	dbSNP
rs928467219	572	dbSNP
rs980430882	574	dbSNP
rs3762941	576	dbSNP
rs192232249	577	dbSNP
rs150797006	578	dbSNP
rs1489202920	580	dbSNP
rs984847368	583	dbSNP
rs1159897992	584	dbSNP
rs926188285	585	dbSNP
rs1418599055	589	dbSNP
rs1314598927	593	dbSNP
rs1280377837	600	dbSNP
rs1219379237	601	dbSNP
rs1301530613	602	dbSNP
rs1026428641	604	dbSNP
rs1447862959	617	dbSNP
rs549947862	624	dbSNP
rs533377624	631	dbSNP
rs1374706075	641	dbSNP
rs966219113	643	dbSNP
rs3762942	645	dbSNP
rs1313936024	654	dbSNP
rs1207749971	667	dbSNP
rs1255233555	672	dbSNP
rs1457915742	680	dbSNP
rs1019548746	692	dbSNP
rs1180082833	695	dbSNP
rs904145505	696	dbSNP
rs1193783355	703	dbSNP
rs1022952398	704	dbSNP
rs1435469990	721	dbSNP
rs1174374996	732	dbSNP
rs866732602	740	dbSNP
rs541484507	743	dbSNP
rs1333531212	749	dbSNP
rs1398389287	750	dbSNP
rs1029066083	756	dbSNP
rs560940428	759	dbSNP
rs1415199205	765	dbSNP
rs1424232289	775	dbSNP
rs1369602613	782	dbSNP
rs572460796	785	dbSNP
rs1217453545	786	dbSNP
rs562070652	788	dbSNP
rs116105299	793	dbSNP
rs1318251650	797	dbSNP
rs1263888610	801	dbSNP
rs1349992099	808	dbSNP
rs907036347	812	dbSNP
rs1192848197	813	dbSNP
rs542364038	814	dbSNP
rs1484608974	815	dbSNP
rs948556204	818	dbSNP
rs141380591	821	dbSNP
rs1048994259	822	dbSNP
rs929304002	823	dbSNP
rs919236087	824	dbSNP
rs1173344297	827	dbSNP
rs1465337235	835	dbSNP
rs976167687	839	dbSNP
rs1351639253	855	dbSNP
rs148077850	860	dbSNP
rs539764036	861	dbSNP
rs1260834527	865	dbSNP
rs887056773	867	dbSNP
rs145650052	868	dbSNP
rs1222122526	869	dbSNP
rs1320435963	873	dbSNP
rs1279461200	875	dbSNP
rs368237542	876	dbSNP
rs1341121355	883	dbSNP
rs1045964300	888	dbSNP
rs1220233682	891	dbSNP
rs1214428534	895	dbSNP
rs553693511	902	dbSNP
rs910625666	903	dbSNP
rs1449305010	907	dbSNP
rs1359973558	910	dbSNP
rs1220199836	916	dbSNP
rs1268779044	919	dbSNP
rs1014131300	928	dbSNP
rs986340416	934	dbSNP
rs1196259648	935	dbSNP
rs968610536	935	dbSNP
rs1475303799	942	dbSNP
rs894226782	949	dbSNP
rs1164008078	952	dbSNP
rs1416251363	953	dbSNP
rs1304611975	954	dbSNP
rs188900482	958	dbSNP
rs1361055021	961	dbSNP
rs935620588	977	dbSNP
rs925621205	981	dbSNP
rs1296293810	983	dbSNP
rs955711797	985	dbSNP
rs1448491681	996	dbSNP
rs1285528052	1000	dbSNP
rs1031266169	1013	dbSNP
rs1227236015	1015	dbSNP
rs1002483666	1018	dbSNP
rs1041949479	1029	dbSNP
rs946272298	1033	dbSNP
rs568109583	1034	dbSNP
rs987589436	1043	dbSNP
rs1423985864	1050	dbSNP
rs13434944	1054	dbSNP
rs1044518490	1062	dbSNP
rs921978638	1073	dbSNP
rs1415366023	1076	dbSNP
rs537484906	1089	dbSNP
rs973465750	1090	dbSNP
rs1471956740	1094	dbSNP
rs963389277	1098	dbSNP
rs1015322675	1100	dbSNP
rs887576863	1115	dbSNP
rs1004916565	1116	dbSNP
rs951369650	1118	dbSNP
rs1421629499	1123	dbSNP
rs182850783	1125	dbSNP
rs1384175077	1126	dbSNP
rs550033408	1135	dbSNP
rs1200140277	1143	dbSNP
rs1336004271	1148	dbSNP
rs1049024630	1150	dbSNP
rs1024267950	1151	dbSNP
rs929168168	1152	dbSNP
rs1309561722	1153	dbSNP
rs919267187	1155	dbSNP
rs141997449	1158	dbSNP
rs1259045489	1161	dbSNP
rs564665081	1169	dbSNP
rs138874621	1175	dbSNP
rs894323001	1181	dbSNP
rs1441074145	1189	dbSNP
rs1203230747	1190	dbSNP
rs1055522066	1197	dbSNP
rs527783976	1198	dbSNP
rs999963792	1202	dbSNP
rs562073310	1204	dbSNP
rs542221395	1211	dbSNP
rs904294657	1214	dbSNP
rs1041762785	1215	dbSNP
rs986593497	1216	dbSNP
rs1478336259	1218	dbSNP
rs35095875	1223	dbSNP
rs915372689	1224	dbSNP
rs988362239	1225	dbSNP
rs545286861	1226	dbSNP
rs1402096286	1227	dbSNP
rs1035229826	1228	dbSNP
rs1400786524	1229	dbSNP
rs1022725395	1234	dbSNP
rs746008091	1234	dbSNP
rs912125047	1236	dbSNP
rs1051967631	1245	dbSNP
rs932116407	1246	dbSNP
rs1343234995	1247	dbSNP
rs922124291	1251	dbSNP
rs887619752	1255	dbSNP
rs1258934216	1258	dbSNP
rs1459310040	1259	dbSNP
rs867399461	1265	dbSNP
rs1165385001	1266	dbSNP
rs1249965510	1267	dbSNP
rs973567267	1280	dbSNP
rs963782324	1293	dbSNP
rs878907704	1297	dbSNP
rs1375862553	1301	dbSNP
rs1443555782	1303	dbSNP
rs907988392	1306	dbSNP
rs1180139596	1308	dbSNP
rs897770443	1318	dbSNP
rs1425291259	1320	dbSNP
rs1439875178	1322	dbSNP
rs73796987	1329	dbSNP
rs1297274695	1332	dbSNP
rs1390780733	1337	dbSNP
rs546078623	1339	dbSNP
rs1388018747	1340	dbSNP
rs944738536	1343	dbSNP
rs1177030983	1350	dbSNP
rs1223274214	1356	dbSNP
rs1279274874	1363	dbSNP
rs1479854862	1366	dbSNP
rs1320238297	1367	dbSNP
rs1216973146	1378	dbSNP
rs889093015	1381	dbSNP
rs1050537813	1387	dbSNP
rs774151409	1395	dbSNP
rs1265166150	1398	dbSNP
rs915321910	1400	dbSNP
rs577066119	1407	dbSNP
rs1194088461	1409	dbSNP
rs1476738411	1409	dbSNP
rs762701458	1409	dbSNP
rs1169233155	1420	dbSNP
rs553928856	1425	dbSNP
rs770760298	1431	dbSNP
rs928246401	1432	dbSNP
rs1364217965	1436	dbSNP
rs1242622613	1439	dbSNP
rs1299361705	1441	dbSNP
rs1377973927	1448	dbSNP
rs533786860	1449	dbSNP
rs1380890193	1452	dbSNP
rs748337842	1453	dbSNP
rs1247045948	1454	dbSNP
rs375486796	1454	dbSNP
rs576456125	1454	dbSNP
rs971104242	1454	dbSNP
rs762701995	1459	dbSNP
rs190934118	1461	dbSNP
rs1217200131	1464	dbSNP
rs958503386	1470	dbSNP
rs376449515	1471	dbSNP
rs577544602	1471	dbSNP
rs781459439	1471	dbSNP
rs991262133	1471	dbSNP
rs554273947	1482	dbSNP
rs796696731	1483	dbSNP
rs897634639	1485	dbSNP
rs1018892993	1490	dbSNP
rs755072014	1491	dbSNP
rs1159710607	1502	dbSNP
rs1363017810	1505	dbSNP
rs889131890	1505	dbSNP
rs35866750	1524	dbSNP
rs1288721847	1525	dbSNP
rs1419741223	1527	dbSNP
rs904262848	1535	dbSNP
rs1020070072	1543	dbSNP
rs1010276953	1551	dbSNP
rs1311358632	1553	dbSNP
rs1315130686	1555	dbSNP
rs1214765124	1556	dbSNP
rs893913751	1562	dbSNP
rs1484123883	1563	dbSNP
rs1198328838	1572	dbSNP
rs1179218020	1574	dbSNP
rs1242149190	1598	dbSNP
rs1439711591	1604	dbSNP
rs764857975	1609	dbSNP
rs890134555	1610	dbSNP
rs1051934941	1619	dbSNP
rs1417709606	1620	dbSNP
rs759328512	1620	dbSNP
rs537571909	1622	dbSNP
rs776745479	1623	dbSNP
rs928112115	1637	dbSNP
rs1405704213	1642	dbSNP
rs1447609999	1648	dbSNP
rs568480072	1649	dbSNP
rs77597936	1650	dbSNP
rs1223092106	1652	dbSNP
rs942252861	1655	dbSNP
rs1267340036	1657	dbSNP
rs1218945991	1661	dbSNP
rs948270225	1666	dbSNP
rs1221475300	1670	dbSNP
rs1262105571	1671	dbSNP
rs1457987525	1677	dbSNP
rs1354491798	1683	dbSNP
rs1230628432	1684	dbSNP
rs907914313	1689	dbSNP
rs983565001	1698	dbSNP
rs539699920	1700	dbSNP
rs866827172	1701	dbSNP
rs1313756266	1703	dbSNP
rs1301661524	1707	dbSNP
rs1404292889	1709	dbSNP
rs1343607994	1713	dbSNP
rs1174815102	1714	dbSNP
rs747063363	1716	dbSNP
rs1466378529	1717	dbSNP
rs1333639489	1726	dbSNP
rs1400148808	1731	dbSNP
rs917940202	1737	dbSNP
rs1352793969	1744	dbSNP
rs990840765	1747	dbSNP
rs951680009	1757	dbSNP
rs1383529994	1759	dbSNP
rs1027419609	1760	dbSNP
rs571106123	1763	dbSNP
rs958596314	1764	dbSNP
rs1156456718	1771	dbSNP
rs1282441717	1773	dbSNP
rs1467216424	1777	dbSNP
rs1318362336	1781	dbSNP
rs971784237	1794	dbSNP
rs1270453733	1802	dbSNP
rs185337344	1803	dbSNP
rs1177649025	1804	dbSNP
rs1490996454	1805	dbSNP
rs780570575	1806	dbSNP
rs1480299095	1808	dbSNP
rs1427881237	1811	dbSNP
rs961876882	1817	dbSNP
rs1478368751	1821	dbSNP
rs1447664474	1829	dbSNP
rs879637881	1829	dbSNP
rs1417651358	1838	dbSNP
rs1409437492	1841	dbSNP
rs1019161074	1853	dbSNP
rs547963218	1859	dbSNP
rs968583554	1860	dbSNP
rs758852460	1861	dbSNP
rs1010000229	1862	dbSNP
rs890228547	1870	dbSNP
rs1484337624	1884	dbSNP
rs866387529	1886	dbSNP
rs7693490	1893	dbSNP
rs1228367168	1902	dbSNP
rs1222722311	1905	dbSNP
rs1291470357	1906	dbSNP
rs995833564	1907	dbSNP
rs900760714	1910	dbSNP
rs1339636715	1911	dbSNP
rs140614183	1915	dbSNP
rs1291693232	1938	dbSNP
rs942161394	1952	dbSNP
rs886624307	1954	dbSNP
rs1240569718	1963	dbSNP
rs1219104249	1966	dbSNP
rs375768505	1970	dbSNP
rs1048254349	1974	dbSNP
rs1384991162	1975	dbSNP
rs1325368686	1976	dbSNP
rs867055621	1983	dbSNP
rs949477490	1990	dbSNP
rs1182496608	1991	dbSNP
rs1315559147	1993	dbSNP
rs1397233488	1994	dbSNP
rs1162790409	1998	dbSNP
rs1361156287	2002	dbSNP
rs918033882	2011	dbSNP
rs990809441	2015	dbSNP
rs568657817	2016	dbSNP
rs1344218636	2018	dbSNP
rs927155208	2021	dbSNP
rs368064445	2029	dbSNP
rs1448243882	2031	dbSNP
rs1335653821	2037	dbSNP
rs757766432	2041	dbSNP
rs571906183	2046	dbSNP
rs371229300	2048	dbSNP
rs999525059	2051	dbSNP
rs1314946433	2053	dbSNP
rs6851446	2054	dbSNP
rs1207228845	2057	dbSNP
rs968927403	2058	dbSNP
rs796324164	2066	dbSNP
rs1282657224	2068	dbSNP
rs1173475671	2069	dbSNP
rs1211005483	2070	dbSNP
rs1476000972	2072	dbSNP
rs370405950	2073	dbSNP
rs1183140408	2077	dbSNP
rs989081041	2079	dbSNP
rs763671589	2084	dbSNP
rs1425608268	2087	dbSNP
rs1244038491	2090	dbSNP
rs111250328	2092	dbSNP
rs1406920958	2094	dbSNP
rs1471149658	2094	dbSNP
rs34171758	2094	dbSNP
rs916846080	2094	dbSNP
rs948243869	2094	dbSNP
rs954454358	2096	dbSNP
rs1451271033	2098	dbSNP
rs1203196700	2104	dbSNP
rs1030077300	2108	dbSNP
rs147763407	2109	dbSNP
rs112271834	2116	dbSNP
rs1338709149	2117	dbSNP
rs546266176	2118	dbSNP
rs1016902332	2120	dbSNP
rs1350339711	2122	dbSNP
rs1006494123	2123	dbSNP
rs1265229675	2130	dbSNP
rs886716380	2135	dbSNP
rs1460184159	2143	dbSNP
rs1203092975	2148	dbSNP
rs1246417912	2150	dbSNP
rs1238819301	2152	dbSNP
rs1179483141	2153	dbSNP
rs1340542776	2161	dbSNP
rs144204897	2165	dbSNP
rs1449945709	2166	dbSNP
rs560223503	2167	dbSNP
rs35874601	2177	dbSNP
rs896567039	2186	dbSNP
rs1055218618	2187	dbSNP
rs937960555	2188	dbSNP
rs953223588	2196	dbSNP
rs878968209	2212	dbSNP
rs1396478711	2213	dbSNP
rs1335758099	2214	dbSNP
rs1437594556	2216	dbSNP
rs1285642231	2226	dbSNP
rs1321886248	2231	dbSNP
rs34062934	2232	dbSNP
rs1258950076	2236	dbSNP
rs947313420	2241	dbSNP
rs1341485563	2242	dbSNP
rs181080815	2246	dbSNP
rs988659744	2249	dbSNP
rs954547290	2260	dbSNP
rs759445482	2269	dbSNP
rs922992418	2271	dbSNP
rs1201286344	2273	dbSNP
rs1442964184	2274	dbSNP
rs1480005433	2278	dbSNP
rs1193859016	2285	dbSNP
rs999475750	2290	dbSNP
rs1460022539	2295	dbSNP
rs1166853070	2298	dbSNP
rs974479702	2299	dbSNP
rs79375295	2300	dbSNP
rs964325065	2304	dbSNP
rs142587671	2305	dbSNP
rs1305525593	2306	dbSNP
rs1343958631	2312	dbSNP
rs1015914263	2323	dbSNP
rs1296540458	2324	dbSNP
rs1182313392	2325	dbSNP
rs1436998456	2331	dbSNP
rs543865926	2332	dbSNP
rs950987577	2338	dbSNP
rs1357167862	2343	dbSNP
rs1027020198	2344	dbSNP
rs1013719275	2347	dbSNP
rs1289509181	2350	dbSNP
rs896663576	2351	dbSNP
rs1049122780	2355	dbSNP
rs1055184918	2365	dbSNP
rs1002307537	2374	dbSNP
rs903958722	2375	dbSNP
rs1378708277	2376	dbSNP
rs1368502176	2378	dbSNP
rs1165953450	2379	dbSNP
rs536355396	2384	dbSNP
rs1043727040	2389	dbSNP
rs1036066936	2402	dbSNP
rs575000905	2403	dbSNP
rs1387383245	2405	dbSNP
rs569652964	2405	dbSNP
rs1327450323	2410	dbSNP
rs987211211	2412	dbSNP
rs1388980241	2422	dbSNP
rs1383532359	2425	dbSNP
rs1248337518	2429	dbSNP
rs953354493	2431	dbSNP
rs1358690278	2437	dbSNP
rs945409682	2439	dbSNP
rs558128143	2441	dbSNP
rs566054209	2443	dbSNP
rs190322284	2447	dbSNP
rs1484787333	2450	dbSNP
rs1204113497	2457	dbSNP
rs1382455917	2462	dbSNP
rs1159359664	2470	dbSNP
rs1462263713	2475	dbSNP
rs989366024	2477	dbSNP
rs571102151	2480	dbSNP
rs1030874347	2500	dbSNP
rs749138515	2503	dbSNP
rs1230909299	2504	dbSNP
rs1288450945	2511	dbSNP
rs1407199752	2519	dbSNP
rs1334850047	2525	dbSNP
rs34514922	2525	dbSNP
rs367545679	2525	dbSNP
rs970724059	2527	dbSNP
rs1309059821	2529	dbSNP
rs553923392	2529	dbSNP
rs1012292371	2533	dbSNP
rs1314847836	2533	dbSNP
rs1263371967	2539	dbSNP
rs1325296168	2541	dbSNP
rs1201209837	2543	dbSNP
rs1268062310	2548	dbSNP
rs1219681454	2560	dbSNP
rs554140604	2565	dbSNP
rs1284603117	2566	dbSNP
rs1178216529	2569	dbSNP
rs34512270	2570	dbSNP
rs908988020	2571	dbSNP
rs1253303733	2578	dbSNP
rs1417700592	2582	dbSNP
rs1158886788	2591	dbSNP
rs1222785185	2596	dbSNP
rs1430216825	2597	dbSNP
rs1471049504	2600	dbSNP
rs756220416	2603	dbSNP
rs1405354108	2608	dbSNP
rs1278106334	2611	dbSNP
rs950434931	2612	dbSNP
rs1407114868	2617	dbSNP
rs1390577649	2618	dbSNP
rs1283747362	2623	dbSNP
rs185955462	2628	dbSNP
rs1221265597	2629	dbSNP
rs1037271134	2630	dbSNP
rs1303058240	2631	dbSNP
rs940366506	2632	dbSNP
rs992423723	2635	dbSNP
rs760525724	2650	dbSNP
rs1349251192	2651	dbSNP
rs768792471	2653	dbSNP
rs568518085	2655	dbSNP
rs747062870	2659	dbSNP
rs1489099584	2660	dbSNP
rs1328900998	2670	dbSNP
rs921670193	2671	dbSNP
rs370635645	2672	dbSNP
rs1267532712	2673	dbSNP
rs774177140	2675	dbSNP
rs903934734	2676	dbSNP
rs771000555	2683	dbSNP
rs1436284873	2684	dbSNP
rs1303723186	2685	dbSNP
rs1395454885	2690	dbSNP
rs1171989217	2691	dbSNP
rs1476985802	2700	dbSNP
rs1022805134	2703	dbSNP
rs1193937428	2707	dbSNP
rs368054532	2710	dbSNP
rs1261227484	2724	dbSNP
rs777948944	2725	dbSNP
rs756382662	2726	dbSNP
rs1280046501	2729	dbSNP
rs1292758776	2732	dbSNP
rs150022553	2734	dbSNP
rs1204987690	2736	dbSNP
rs1293152640	2740	dbSNP
rs373878149	2741	dbSNP
rs779977250	2742	dbSNP
rs548803141	2743	dbSNP
rs766829456	2746	dbSNP
rs1339456011	2750	dbSNP
rs1296039956	2756	dbSNP
rs756800343	2759	dbSNP
rs1448945098	2760	dbSNP
rs753451192	2761	dbSNP
rs1052945394	2764	dbSNP
rs959522102	2765	dbSNP
rs1368137211	2767	dbSNP
rs1027051677	2772	dbSNP
rs370285116	2774	dbSNP
rs995701927	2777	dbSNP
rs1421505733	2778	dbSNP
rs201278233	2784	dbSNP
rs139302710	2787	dbSNP
rs775012146	2790	dbSNP
rs746333099	2795	dbSNP
rs112868163	2796	dbSNP
rs144804114	2804	dbSNP
rs1208398756	2811	dbSNP
rs770903378	2812	dbSNP
rs749352621	2813	dbSNP
rs1310019291	2818	dbSNP
rs552589500	2818	dbSNP
rs769865959	2820	dbSNP
rs890126905	2823	dbSNP
rs1275736707	2833	dbSNP
rs771577375	2837	dbSNP
rs369451459	2847	dbSNP
rs755331858	2852	dbSNP
rs1218134063	2856	dbSNP
rs1240594641	2858	dbSNP
rs780592787	2858	dbSNP
rs908921073	2859	dbSNP
rs1445463464	2862	dbSNP
rs1356212451	2868	dbSNP
rs759032524	2870	dbSNP
rs1465024282	2875	dbSNP
rs1184362308	2879	dbSNP
rs1386989009	2892	dbSNP
rs984953241	2892	dbSNP
rs1162619692	2895	dbSNP
rs928958099	2896	dbSNP
rs918943718	2897	dbSNP
rs991847125	2927	dbSNP
rs1283206576	2932	dbSNP
rs532430680	2933	dbSNP
rs560558272	2934	dbSNP
rs1452686055	2935	dbSNP
rs1033971441	2936	dbSNP
rs553992396	2937	dbSNP
rs1379975252	2938	dbSNP
rs923737065	2939	dbSNP
rs978421010	2943	dbSNP
rs1351779246	2945	dbSNP
rs1430070526	2953	dbSNP
rs1343707743	2954	dbSNP
rs1328797990	2957	dbSNP
rs1204571551	2958	dbSNP
rs968630143	2960	dbSNP
rs1245000973	2963	dbSNP
rs1022350722	2966	dbSNP
rs76592500	2972	dbSNP
rs1233441623	2987	dbSNP
rs1471036007	2988	dbSNP
rs35029558	2988	dbSNP
rs1470186352	3001	dbSNP
rs1410736730	3020	dbSNP
rs1404999709	3023	dbSNP
rs1469955629	3024	dbSNP
rs1174204773	3037	dbSNP
rs1178185774	3040	dbSNP
rs892577813	3044	dbSNP
rs1394961988	3046	dbSNP
rs1334072375	3059	dbSNP
rs1336940694	3060	dbSNP
rs959621135	3072	dbSNP
rs1029606742	3082	dbSNP
rs1278097637	3083	dbSNP
rs998176188	3091	dbSNP
rs1224283010	3107	dbSNP
rs1420102295	3118	dbSNP
rs181855947	3122	dbSNP
rs1321485734	3125	dbSNP
rs1474133007	3131	dbSNP
rs560705806	3133	dbSNP
rs1273588531	3142	dbSNP
rs1439538748	3143	dbSNP
rs757641909	3145	dbSNP
rs1462054016	3148	dbSNP
rs1250752949	3151	dbSNP
rs1480644809	3159	dbSNP
rs544051525	3163	dbSNP
rs574987740	3164	dbSNP
rs1426840585	3178	dbSNP
rs1262854375	3189	dbSNP
rs1202365199	3194	dbSNP
rs1309828145	3195	dbSNP
rs961542272	3196	dbSNP
rs1296899491	3203	dbSNP
rs1015738456	3208	dbSNP
rs1285422827	3214	dbSNP
rs558267095	3220	dbSNP
rs919036711	3225	dbSNP
rs1232589141	3227	dbSNP
rs1056140464	3237	dbSNP
rs939002697	3241	dbSNP
rs995884968	3243	dbSNP
rs926827774	3248	dbSNP
rs879042710	3249	dbSNP
rs1000535985	3251	dbSNP
rs902262620	3262	dbSNP
rs1042261079	3263	dbSNP
rs1193493750	3279	dbSNP
rs981444480	3284	dbSNP
rs78282503	3287	dbSNP
rs917867665	3290	dbSNP
rs757806793	3295	dbSNP
rs190547060	3296	dbSNP
rs1169647727	3299	dbSNP
rs1407714632	3301	dbSNP
rs1005700592	3302	dbSNP
rs1290829234	3307	dbSNP
rs1029739400	3308	dbSNP
rs998101552	3311	dbSNP
rs1540287	3316	dbSNP
rs1296777919	3320	dbSNP
rs534178009	3321	dbSNP
rs1443593112	3323	dbSNP
rs367944896	3324	dbSNP
rs1182188596	3325	dbSNP
rs1247871219	3325	dbSNP
rs1289264160	3342	dbSNP
rs755741429	3345	dbSNP
rs868449641	3346	dbSNP
rs1263479353	3365	dbSNP
rs1252477997	3367	dbSNP
rs555191835	3368	dbSNP
rs1187429017	3369	dbSNP
rs1390074920	3371	dbSNP
rs1445711060	3377	dbSNP
rs752440856	3380	dbSNP
rs1049354272	3387	dbSNP
rs61792605	3388	dbSNP
rs897539963	3389	dbSNP
rs1432951108	3400	dbSNP
rs1246761896	3404	dbSNP
rs1056235145	3408	dbSNP
rs1320032802	3409	dbSNP
rs139974254	3410	dbSNP
rs187407586	3413	dbSNP
rs1392988680	3415	dbSNP
rs564784470	3417	dbSNP
rs3762944	3422	dbSNP
rs1262087749	3423	dbSNP
rs1326692578	3426	dbSNP
rs1167144796	3427	dbSNP
rs1243173312	3429	dbSNP
rs1462273687	3431	dbSNP
rs1185906907	3433	dbSNP
rs1254765120	3437	dbSNP
rs1475672174	3441	dbSNP
rs1413270499	3442	dbSNP
rs1180485017	3444	dbSNP
rs566712439	3445	dbSNP
rs915531622	3449	dbSNP
rs1233807787	3451	dbSNP
rs1178621868	3452	dbSNP
rs543977239	3453	dbSNP
rs964354474	3455	dbSNP
rs1456802621	3456	dbSNP
rs988714840	3458	dbSNP
rs1255638596	3460	dbSNP
rs1214956415	3463	dbSNP
rs546979249	3469	dbSNP
rs529945357	3476	dbSNP
rs976815969	3477	dbSNP
rs543279920	3478	dbSNP
rs560890530	3488	dbSNP
rs1301008113	3494	dbSNP
rs1375328011	3502	dbSNP
rs1309683106	3503	dbSNP
rs1391734257	3509	dbSNP
rs1308809836	3510	dbSNP
rs1227322098	3511	dbSNP
rs1348431363	3511	dbSNP
rs1263390449	3513	dbSNP
rs1488167220	3519	dbSNP
rs1445993680	3527	dbSNP
rs1325058937	3529	dbSNP
rs1207498813	3530	dbSNP
rs75901908	3531	dbSNP
rs576608318	3532	dbSNP
rs1308728701	3533	dbSNP
rs1349369714	3537	dbSNP
rs1163025185	3538	dbSNP
rs1402646599	3541	dbSNP
rs1430326433	3551	dbSNP
rs1233370346	3552	dbSNP
rs1174102061	3553	dbSNP
rs1313491994	3554	dbSNP
rs1293314164	3556	dbSNP
rs1409230111	3557	dbSNP
rs1411816513	3558	dbSNP
rs1438405587	3559	dbSNP
rs1283527988	3579	dbSNP
rs1299484497	3579	dbSNP
rs1299816515	3579	dbSNP
rs1299931580	3579	dbSNP
rs1347055207	3579	dbSNP
rs1409051334	3579	dbSNP
rs531222767	3579	dbSNP
rs902293838	3579	dbSNP

- Nature methods, 2011

Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.

- Nature, 2013

Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.