pre-miRNA Information
pre-miRNA hsa-mir-6787   
Genomic Coordinates chr17: 82236668 - 82236728
Description Homo sapiens miR-6787 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6787-5p
Sequence 6| UGGCGGGGGUAGAGCUGGCUGC |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs778888046 4 dbSNP
rs772018061 5 dbSNP
rs760886644 6 dbSNP
rs776925052 7 dbSNP
rs760060985 8 dbSNP
rs1432528063 9 dbSNP
rs778772390 10 dbSNP
rs924024166 11 dbSNP
rs201523090 13 dbSNP
rs1451075810 17 dbSNP
rs1378844609 18 dbSNP
Putative Targets

Gene Information
Gene Symbol PDRG1   
Synonyms C20orf126, PDRG
Description p53 and DNA damage regulated 1
Transcript NM_030815   
Expression
Putative miRNA Targets on PDRG1
3'UTR of PDRG1
(miRNA target sites are highlighted)
>PDRG1|NM_030815|3'UTR
   1 GACTCAAGAACCAAGATGGGGGACCAGCAACCCCCCAGGGTCATGGAGGACCCAGGACCCTCCAACCTTGACACCTGTAA
  81 GGACAGGATCTGCCCTGTAAGGGGCCAGCCGTCAGGAATCTGGCCATGAAAACCTCTTTGTAGTGCTTGGCTACTCTGTG
 161 ATGGCAGGAGGGAACCTTCAGCCTGTCTGGCTGCTGGACCTGGACACCAGGGCTCGGTGGACACAAGATCTATTGACGGG
 241 CCTTGGTAGCCACCAGTGGGTGTGTGGGGCAGTGGCTGTGGGGGTGTAAGAATGACTGCAACAGGCACTTCCCAACAATG
 321 GCCTGCTGTTCACATGGACCCTGAGCAAGGAAGGAGGGAGGGAGGGGCAGAGTGGAGTGTCATTCCAGCATTCCTCTCAG
 401 AAGGGAGAGAGGTTTTCAGGCTGGTGCCATGCGATTGGAATAAAGCAGGAGGCTCATGGGTGGTTGCTGAATGAAGAACA
 481 GAATCTTGGTGCTTTGTGGCTCACCACAGCCATCTGTGGGGCAGGCACACACACCTCCCGCCAGCTCCAATTTTGCACTT
 561 TTTCCCTGCTTGATTCCAAGAGTAGGTGCTGCCTAGCAGCCCTTCGTGGCCACTCTTTACTCAGGAGGGCCTTGCAGAGT
 641 CCTGCACCAGGCCTGGGTGAGTGGATGCGCCTCTTACCATATGACACGTGTCAAGATGCCCTTCCGCCCCCTCTGAAAGT
 721 GGGGCCCGGCCAGCACTGCTCGTTACTGTCTGCCTTCAGTGGTCTGAGGTCCCAGTATGAACTGCCGTGAAGTCAAAACT
 801 CTTATGTGTTCATTAAGGGCTCAATAAATGTTAGCTGAATGAATGAATAGCAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgUCGGU-CGAGAUGGGGGCGGu 5'
            || ||  | |  |:|||||| 
Target 5' gcAGGCACACACACCTCCCGCCa 3'
521 - 543 136.00 -24.30
2
miRNA  3' cgucgGUCGAGAUGGGGGCGGu 5'
               || ||:| :|||:||: 
Target 5' ttttgCA-CTTTTTCCCTGCTt 3'
551 - 571 124.00 -16.10
3
miRNA  3' cguCGG-UCGAGAUGGGGGCGGu 5'
             |:| || |   |::||||| 
Target 5' cgtGTCAAGATGCCCTTCCGCCc 3'
687 - 709 119.00 -17.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31781068 9 COSMIC
COSN26988545 31 COSMIC
COSN30479763 33 COSMIC
COSN30172763 59 COSMIC
COSN30157654 87 COSMIC
COSN1869638 92 COSMIC
COSN31602547 242 COSMIC
COSN31591188 249 COSMIC
COSN31569214 259 COSMIC
COSN5968642 326 COSMIC
COSN30543056 485 COSMIC
COSN31489197 637 COSMIC
COSN9125620 841 COSMIC
COSN7089067 1432 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs377211522 1 dbSNP
rs138193548 2 dbSNP
rs758039145 11 dbSNP
rs530218582 16 dbSNP
rs1390576718 17 dbSNP
rs372764382 22 dbSNP
rs573351364 24 dbSNP
rs11558280 27 dbSNP
rs1456670273 30 dbSNP
rs775185931 32 dbSNP
rs752077648 33 dbSNP
rs764376302 34 dbSNP
rs753443507 35 dbSNP
rs766035603 39 dbSNP
rs1240681647 42 dbSNP
rs760287409 44 dbSNP
rs1250322033 45 dbSNP
rs539161721 46 dbSNP
rs1207266605 50 dbSNP
rs959531918 58 dbSNP
rs1272059755 59 dbSNP
rs1348108893 63 dbSNP
rs1033765167 70 dbSNP
rs1211219201 92 dbSNP
rs982166687 94 dbSNP
rs1267473812 103 dbSNP
rs541455102 108 dbSNP
rs888014459 110 dbSNP
rs55697804 111 dbSNP
rs1454215428 121 dbSNP
rs11558281 125 dbSNP
rs1179656834 126 dbSNP
rs1365852986 134 dbSNP
rs1244764523 136 dbSNP
rs566591866 137 dbSNP
rs931949246 138 dbSNP
rs1391685466 149 dbSNP
rs1407204829 154 dbSNP
rs993478295 158 dbSNP
rs745739232 159 dbSNP
rs899116191 167 dbSNP
rs1370243263 172 dbSNP
rs1016174803 173 dbSNP
rs1007812635 178 dbSNP
rs1333723966 180 dbSNP
rs565262947 181 dbSNP
rs543400848 185 dbSNP
rs368274539 187 dbSNP
rs1265709793 192 dbSNP
rs934438394 199 dbSNP
rs976525838 201 dbSNP
rs944807800 210 dbSNP
rs924047291 214 dbSNP
rs1051478612 215 dbSNP
rs578037897 216 dbSNP
rs1253144094 219 dbSNP
rs1417747941 227 dbSNP
rs1181509806 228 dbSNP
rs1327127648 230 dbSNP
rs902929364 232 dbSNP
rs1041390997 234 dbSNP
rs768491129 237 dbSNP
rs189886185 238 dbSNP
rs1394217214 241 dbSNP
rs1390662697 242 dbSNP
rs1021529065 243 dbSNP
rs1341897237 248 dbSNP
rs1231013502 250 dbSNP
rs1292159712 253 dbSNP
rs1317949662 253 dbSNP
rs535995493 258 dbSNP
rs1199951481 259 dbSNP
rs1391235795 263 dbSNP
rs142316038 266 dbSNP
rs1479938094 266 dbSNP
rs115632928 279 dbSNP
rs746586598 280 dbSNP
rs184904319 281 dbSNP
rs201597847 285 dbSNP
rs938195003 287 dbSNP
rs1459873145 297 dbSNP
rs926748979 299 dbSNP
rs1182742866 301 dbSNP
rs982262839 302 dbSNP
rs1002991506 303 dbSNP
rs1478216335 305 dbSNP
rs970825971 312 dbSNP
rs1471991608 313 dbSNP
rs919337978 315 dbSNP
rs537871248 318 dbSNP
rs1371330122 320 dbSNP
rs1461360137 323 dbSNP
rs1303225044 327 dbSNP
rs1376996967 328 dbSNP
rs906932053 330 dbSNP
rs567297606 333 dbSNP
rs538704302 335 dbSNP
rs571200793 336 dbSNP
rs191652632 342 dbSNP
rs1016598962 350 dbSNP
rs537351747 352 dbSNP
rs777393090 353 dbSNP
rs758097183 356 dbSNP
rs1004976743 365 dbSNP
rs113129323 370 dbSNP
rs1306276757 371 dbSNP
rs1291115188 372 dbSNP
rs953228807 375 dbSNP
rs1486878853 377 dbSNP
rs548819545 380 dbSNP
rs188433406 388 dbSNP
rs114626798 399 dbSNP
rs1270586943 402 dbSNP
rs1229494501 405 dbSNP
rs559973251 406 dbSNP
rs1277819337 410 dbSNP
rs1040358974 411 dbSNP
rs1259675159 412 dbSNP
rs1427870976 430 dbSNP
rs547941675 432 dbSNP
rs532638162 433 dbSNP
rs1041412556 435 dbSNP
rs1323068168 439 dbSNP
rs766613845 440 dbSNP
rs142832152 441 dbSNP
rs549295656 446 dbSNP
rs914415822 457 dbSNP
rs141944223 458 dbSNP
rs938304964 462 dbSNP
rs926842482 463 dbSNP
rs1350661666 464 dbSNP
rs116824985 465 dbSNP
rs949523735 472 dbSNP
rs927224861 489 dbSNP
rs919349475 493 dbSNP
rs779724830 494 dbSNP
rs541064478 495 dbSNP
rs750842248 496 dbSNP
rs1323861709 499 dbSNP
rs531511915 500 dbSNP
rs560821063 501 dbSNP
rs768145588 502 dbSNP
rs1191823444 504 dbSNP
rs986526170 512 dbSNP
rs1452498988 515 dbSNP
rs953321344 519 dbSNP
rs1004589150 527 dbSNP
rs761981996 530 dbSNP
rs542497949 534 dbSNP
rs1344212485 538 dbSNP
rs571937226 539 dbSNP
rs553546468 540 dbSNP
rs967142791 545 dbSNP
rs544814593 546 dbSNP
rs1250244355 550 dbSNP
rs1020469101 551 dbSNP
rs376265506 558 dbSNP
rs1282315275 566 dbSNP
rs1225800254 567 dbSNP
rs1011294712 572 dbSNP
rs6121291 585 dbSNP
rs1305191423 603 dbSNP
rs1316543932 604 dbSNP
rs892862637 605 dbSNP
rs148529008 606 dbSNP
rs1275060699 609 dbSNP
rs1467095869 613 dbSNP
rs41293122 615 dbSNP
rs775799411 618 dbSNP
rs1238598369 619 dbSNP
rs1471065443 625 dbSNP
rs1232317665 629 dbSNP
rs1008876763 632 dbSNP
rs1320959439 642 dbSNP
rs902519758 645 dbSNP
rs1042462748 656 dbSNP
rs1343364372 657 dbSNP
rs905476954 660 dbSNP
rs1336015252 662 dbSNP
rs946774716 663 dbSNP
rs1046650900 668 dbSNP
rs949533776 669 dbSNP
rs1444889238 673 dbSNP
rs1278144231 675 dbSNP
rs1372881036 677 dbSNP
rs145786583 687 dbSNP
rs927202296 688 dbSNP
rs981781426 690 dbSNP
rs970995609 697 dbSNP
rs1036869031 703 dbSNP
rs570381577 704 dbSNP
rs183760918 705 dbSNP
rs372699971 706 dbSNP
rs536926094 707 dbSNP
rs983121781 716 dbSNP
rs369848496 720 dbSNP
rs1483384892 725 dbSNP
rs1027848763 727 dbSNP
rs566325820 728 dbSNP
rs1170759625 732 dbSNP
rs547962973 739 dbSNP
rs923191787 741 dbSNP
rs115501738 742 dbSNP
rs1443106272 745 dbSNP
rs1415663228 747 dbSNP
rs967195600 748 dbSNP
rs116251021 753 dbSNP
rs551680628 757 dbSNP
rs1270775283 761 dbSNP
rs1344569750 779 dbSNP
rs1212683185 781 dbSNP
rs957182592 785 dbSNP
rs745680195 786 dbSNP
rs367755650 787 dbSNP
rs757044856 794 dbSNP
rs1359532630 796 dbSNP
rs1285903183 804 dbSNP
rs751420513 804 dbSNP
rs143367366 805 dbSNP
rs560925639 808 dbSNP
rs1166627254 810 dbSNP
rs1020964287 811 dbSNP
rs1358111492 812 dbSNP
rs542559175 815 dbSNP
rs1310519174 817 dbSNP
rs1431310391 830 dbSNP
rs527570770 838 dbSNP
rs1010934115 844 dbSNP
rs770911462 845 dbSNP
rs6121290 857 dbSNP
rs1319087772 862 dbSNP
rs1167509868 866 dbSNP
rs893882026 866 dbSNP
rs779091944 869 dbSNP
rs1236304808 882 dbSNP
rs746502425 897 dbSNP
rs139924671 898 dbSNP
rs777306936 899 dbSNP
rs6061046 901 dbSNP
rs949970187 908 dbSNP
rs1285787923 913 dbSNP
rs907823301 918 dbSNP
rs370747219 921 dbSNP
rs577683457 922 dbSNP
rs1455032052 925 dbSNP
rs1195907802 951 dbSNP
rs766508039 961 dbSNP
rs983067930 966 dbSNP
rs747706478 967 dbSNP
rs932000128 968 dbSNP
rs923244186 971 dbSNP
rs976040745 972 dbSNP
rs945989141 979 dbSNP
rs778645409 980 dbSNP
rs1395132926 988 dbSNP
rs992774802 997 dbSNP
rs913136466 1000 dbSNP
rs1204030574 1003 dbSNP
rs974901521 1008 dbSNP
rs1301011385 1011 dbSNP
rs1305578449 1012 dbSNP
rs1239468488 1016 dbSNP
rs756370085 1017 dbSNP
rs1348088178 1018 dbSNP
rs761042903 1018 dbSNP
rs1273200429 1019 dbSNP
rs1228868437 1035 dbSNP
rs1469320824 1039 dbSNP
rs556187571 1043 dbSNP
rs543959797 1045 dbSNP
rs1251643071 1050 dbSNP
rs34089906 1057 dbSNP
rs1034105567 1060 dbSNP
rs1182964282 1062 dbSNP
rs1167985892 1067 dbSNP
rs1468737788 1075 dbSNP
rs1158539362 1076 dbSNP
rs1395249737 1076 dbSNP
rs1462978929 1077 dbSNP
rs573711198 1077 dbSNP
rs1350517341 1083 dbSNP
rs1021245572 1089 dbSNP
rs1010881669 1095 dbSNP
rs555400395 1102 dbSNP
rs1237816243 1103 dbSNP
rs1293405422 1110 dbSNP
rs1336357081 1114 dbSNP
rs1230900036 1118 dbSNP
rs1460125227 1122 dbSNP
rs114986928 1123 dbSNP
rs566337942 1126 dbSNP
rs1024006947 1138 dbSNP
rs1002704865 1147 dbSNP
rs554077096 1150 dbSNP
rs906650012 1157 dbSNP
rs1181690988 1161 dbSNP
rs114350216 1162 dbSNP
rs1476239293 1164 dbSNP
rs192600038 1166 dbSNP
rs1367819956 1168 dbSNP
rs550276737 1169 dbSNP
rs1169483042 1176 dbSNP
rs531688870 1183 dbSNP
rs1408952548 1192 dbSNP
rs1252575121 1198 dbSNP
rs567361701 1207 dbSNP
rs1292127188 1210 dbSNP
rs1176877233 1213 dbSNP
rs1479767289 1214 dbSNP
rs962363782 1223 dbSNP
rs1228765339 1231 dbSNP
rs750870356 1235 dbSNP
rs1047657748 1236 dbSNP
rs1015585958 1240 dbSNP
rs1337887793 1242 dbSNP
rs930273531 1246 dbSNP
rs1006399818 1249 dbSNP
rs887917125 1260 dbSNP
rs920264261 1263 dbSNP
rs1486735953 1267 dbSNP
rs1185977685 1277 dbSNP
rs376361287 1278 dbSNP
rs1255535970 1279 dbSNP
rs1248300486 1281 dbSNP
rs750923667 1282 dbSNP
rs1333796061 1283 dbSNP
rs1271221160 1287 dbSNP
rs1371221935 1289 dbSNP
rs1428887640 1290 dbSNP
rs1173960859 1294 dbSNP
rs188983745 1297 dbSNP
rs911668180 1301 dbSNP
rs987623978 1304 dbSNP
rs1301804002 1308 dbSNP
rs1361997456 1308 dbSNP
rs966880799 1310 dbSNP
rs996243241 1310 dbSNP
rs185418189 1312 dbSNP
rs989732308 1315 dbSNP
rs193175077 1316 dbSNP
rs551300380 1319 dbSNP
rs1208965226 1322 dbSNP
rs913154845 1327 dbSNP
rs1255590955 1328 dbSNP
rs1054741350 1332 dbSNP
rs1259581743 1340 dbSNP
rs935868045 1344 dbSNP
rs1293689869 1346 dbSNP
rs1396637809 1347 dbSNP
rs533189360 1347 dbSNP
rs979920247 1348 dbSNP
rs188187497 1351 dbSNP
rs182558347 1354 dbSNP
rs1286539140 1366 dbSNP
rs1387173934 1370 dbSNP
rs1163435214 1379 dbSNP
rs917002046 1381 dbSNP
rs1304684952 1382 dbSNP
rs886276902 1386 dbSNP
rs1217787117 1389 dbSNP
rs1459255097 1397 dbSNP
rs866760743 1407 dbSNP
rs1412853273 1409 dbSNP
rs1218122208 1410 dbSNP
rs1047605554 1412 dbSNP
rs1464426521 1414 dbSNP
rs994705697 1415 dbSNP
rs899121884 1420 dbSNP
rs1452363769 1424 dbSNP
rs1039090867 1443 dbSNP
rs1408267142 1445 dbSNP
rs762266024 1449 dbSNP
rs943078374 1450 dbSNP
rs1410549229 1463 dbSNP
rs11697022 1465 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 81572.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065669
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_8
Location of target site ENST00000202017.4 | 3UTR | CCUCCCGCCAGCUCCAAUUUUGCACUUUUUCCCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000202017.4 | 3UTR | CCAGCUCCAAUUUUGCACUUUUUCCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
90 hsa-miR-6787-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT449091 XPO6 exportin 6 2 2
MIRT449991 PSMG1 proteasome assembly chaperone 1 2 2
MIRT454608 MYADM myeloid associated differentiation marker 2 2
MIRT456116 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT457064 TOR4A torsin family 4 member A 2 2
MIRT461023 SDF4 stromal cell derived factor 4 2 2
MIRT467197 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT471711 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472566 NACC1 nucleus accumbens associated 1 2 2
MIRT476079 GRB2 growth factor receptor bound protein 2 2 2
MIRT480150 CALR calreticulin 2 2
MIRT483027 KHSRP KH-type splicing regulatory protein 2 4
MIRT483498 STMN3 stathmin 3 2 4
MIRT483728 THSD4 thrombospondin type 1 domain containing 4 2 2
MIRT484550 BARHL1 BarH like homeobox 1 2 6
MIRT484684 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486059 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT486116 INO80E INO80 complex subunit E 2 2
MIRT486313 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486525 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486857 DPF1 double PHD fingers 1 2 2
MIRT487352 PHF15 jade family PHD finger 2 1 1
MIRT487582 FAM83H family with sequence similarity 83 member H 2 4
MIRT487792 GPR20 G protein-coupled receptor 20 2 4
MIRT488104 POU3F1 POU class 3 homeobox 1 2 2
MIRT488786 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT489361 SYNGR1 synaptogyrin 1 2 4
MIRT489387 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489680 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT489731 GNAI2 G protein subunit alpha i2 2 4
MIRT489750 TACC3 transforming acidic coiled-coil containing protein 3 2 2
MIRT490029 PCSK4 proprotein convertase subtilisin/kexin type 4 2 2
MIRT490379 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT490580 SLC47A1 solute carrier family 47 member 1 2 2
MIRT490753 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT491187 JUND JunD proto-oncogene, AP-1 transcription factor subunit 2 4
MIRT491301 VGF VGF nerve growth factor inducible 2 2
MIRT491462 HOXB8 homeobox B8 2 2
MIRT491702 PDZD4 PDZ domain containing 4 2 2
MIRT491724 RTN4R reticulon 4 receptor 2 2
MIRT491737 SEMA3F semaphorin 3F 2 2
MIRT491984 UNK unkempt family zinc finger 2 2
MIRT492844 NRGN neurogranin 2 2
MIRT492936 NEUROD2 neuronal differentiation 2 2 4
MIRT493713 H2AFX H2A histone family member X 2 2
MIRT494623 ASB6 ankyrin repeat and SOCS box containing 6 2 4
MIRT494703 ARHGAP31 Rho GTPase activating protein 31 2 2
MIRT495602 NKX2-5 NK2 homeobox 5 2 2
MIRT495750 PDE4C phosphodiesterase 4C 2 4
MIRT500367 ZNF385A zinc finger protein 385A 2 2
MIRT501161 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501702 PCGF3 polycomb group ring finger 3 2 6
MIRT504922 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT517945 TRIM59 tripartite motif containing 59 2 2
MIRT524212 DDI2 DNA damage inducible 1 homolog 2 2 6
MIRT531186 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 2 2
MIRT531972 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT558055 EVI5L ecotropic viral integration site 5 like 2 2
MIRT560482 LACE1 AFG1 like ATPase 2 2
MIRT563217 FXN frataxin 2 2
MIRT569095 FSCN1 fascin actin-bundling protein 1 2 2
MIRT569522 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569531 CTTN cortactin 2 2
MIRT569848 RGS5 regulator of G protein signaling 5 2 2
MIRT570738 ANKRD52 ankyrin repeat domain 52 2 2
MIRT574140 MARVELD1 MARVEL domain containing 1 2 2
MIRT615994 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT628493 ZNF556 zinc finger protein 556 2 2
MIRT633451 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT649054 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649340 HEXA hexosaminidase subunit alpha 2 2
MIRT670226 PTCHD1 patched domain containing 1 2 2
MIRT670666 KIAA1551 KIAA1551 2 2
MIRT671452 CDH7 cadherin 7 2 2
MIRT671729 ZNF451 zinc finger protein 451 2 2
MIRT690285 ZNF154 zinc finger protein 154 2 2
MIRT700575 PRSS22 protease, serine 22 2 2
MIRT701411 NKRF NFKB repressing factor 2 2
MIRT711877 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712082 UNC13A unc-13 homolog A 2 2
MIRT712523 CYTH2 cytohesin 2 2 2
MIRT712751 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT714681 PRX periaxin 2 2
MIRT714718 VPS8 VPS8, CORVET complex subunit 2 2
MIRT717508 HRNR hornerin 2 2
MIRT717650 THBS2 thrombospondin 2 2 2
MIRT719592 PIAS4 protein inhibitor of activated STAT 4 2 2
MIRT720521 PTGR2 prostaglandin reductase 2 2 2
MIRT721295 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT724922 VPS18 VPS18, CORVET/HOPS core subunit 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6787 Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6787-5p Dabrafenib 44462760 NSC764134 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-6787-5p Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-6787-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-6787-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6787-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (LCC2)
hsa-miR-6787-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-6787-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-6787-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-6787-5p Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)

Error report submission