pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC35F1   
Synonyms C6orf169, dJ230I3.1
Description solute carrier family 35 member F1
Transcript NM_001029858   
Expression
Putative miRNA Targets on SLC35F1
3'UTR of SLC35F1
(miRNA target sites are highlighted)
>SLC35F1|NM_001029858|3'UTR
   1 GGTGAGGCCCGCCCTGCCAACTGAGGCCAACTCATTGGCCATGTTTTTGCCCATCATCTCTGTATTGTACATAGAGAAAG
  81 GTATTTACTAGGTGCAGTTTACACAGGTGGACTGCAAGGTAGCAAATCCTCCAAAAGCTTGTGAAAGGAACAAGCTCAAC
 161 ATCACTGGAGACACAGGCTCTAATCCACCTGACTTGGAAGGATGCCTAGCTAACGTGTATCCTGATCACAACTCCCCTGC
 241 ATTCATTACTGTGAAAATTTTTGAATCAAAAGCAAGTATTATTGTTATTATGATTTGTATTATTATTATTGCTGTTACTG
 321 TTATTACACCAACTTTCAGGAGGATGTTTTGTACTCCTGATGGAAACTATTGCCAGACCCACATGTAGTCAACATAAACC
 401 CCACTTTTCTATGGCAATTCACTTTTTAAGAGTCATACTTTATTTTTTTGCACAGACTATATGAGTGATGCATGCCACAG
 481 GAGCTCCACCCCTGAGAAGTTTCCTTTTCCTAGGGACCTGGTGGTTAATGGTTTCCTCTGTTACCTGTTGGATTGCCTGC
 561 TCAATAAGTATTTTGTGCTGTGACCTTTGTGGGGAGGGGCAACTGACCATATACTTCTCTATTCTAGGAATAGATATAAA
 641 AGAAACATTTTAGCCTTTTTATATTTCGATCTCTGATTACTCCAGGCCATTGCCTTTCTGTTGTGCCACGTGATTCTGCT
 721 AATCAAGTCCCTGTAATAACAGGATAAGGACTGTTCCATTACTGTGGCTTTTGGGAGCCCCCAGAAATAATATCATTTGT
 801 GTTTAGGACAATATATAATTATAAAATCTTTCTGCTCCTCCCTGTAGCCTCTCTTCAAAAACTATCTTTTATTTTTTTTC
 881 CAGATTTCCTTAGTGATAATATGGAAATTAATCAAGGCACTGGAAAAAGCCATGGTCCTCTGCCCTTTTAATTCTGTGAC
 961 ACCTTTTTAAAAATACACCAGCATGGAAATTACCTTTATTGTGGAAAATCATTGGTTGTGCCACCTCCTAACAAAGTCAA
1041 GGTGCTGATGTGGAGCAGTCTTTGAAAATGGCTTAATTGATTTGGCCACTTTGCAGTGGTAACAATGTCATCATTGAAAA
1121 AGTCTGGCATTTTGGTCATATTTGGCATCCATTCAATAACAGATATATTGACACGACATTCTTTTTTTTTTTTTTTTTTT
1201 TTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCGGTGGCACGATCTCAGCTCACTGCAACCTCCGCCTCCG
1281 GGATTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCTGCCACGACGCCCAGCTAATTTTTT
1361 GTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCACCTTGG
1441 CCTCCCGAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCGACACGACATTCTTATGGACCCAGAGAATACTGC
1521 AGGATCCTGATAAGACCTTGAGTGATATGTCACTAGTCTAATCTGTTGCCCTTAAAATAGCCCTTTTTTCAAACACAGGA
1601 AATTAAGAAACACCACAGACCTCTATTATTTAGAATAGATTCTATGTGTCAGTATGTGATGTACTCTTTTAGTTTGACTG
1681 ACTTCAATACCATTCAAAAAGATCCTCAATGGAGTTACAGGGTTTATAGGGGAAAAATACATGTTTATGAGACATTGGGC
1761 AATTCAAATCAACATGTGTTACATAAGCAAGCAAAGCAAAACACCAGTGGGGTCTCTGGAAAGTAAAAGGACAGACTACA
1841 GTAGAAGGACTGATCCCAGAGTGCCTGTACAAGGCCTAAATCTGGCAGGCAAAAGCATCCCACACTGTCTGTCAGCACCC
1921 ACATGGCCTTTTTGCCTGCCTTCTATAACGGGTAAGTGGACCTACCCTTGGAGATAGAGAAGAAAAATTATCTTCTCTGA
2001 TATTCGGATGTAATGGTCATCTCAGTTCAGCCCCCTAGGAAACATGTTTTATTTTCCATGGGGAAAATATCAGCGTTAAA
2081 GCTCTATCAAATCAAAACAACTTTGCCAACATCTTCTCTCTGCTACCTTTTAAACCAATTAAATACCTTTCTCTGAATAT
2161 TTTGTCCATTCAGATCCGAAGACCTTTAAAGACTGTGGTTTTATTTTTGTGTTTACATTCCTTTGGTTTGAATAATTTGC
2241 TTGATTTATTGCATTTTTAGTATTTATTTTAAGCCAGATGTTTTCATCTTTGATTCATTTTTATGACATTAATTTGTAGA
2321 CACTTAGTAAAGTCTTATGAGAAGCAAGTGGATGAAATTATCTCCAAGTCCACTCAGTAGACTGGAGTTTTTTAAAAATA
2401 TAAATTTCCAAAAAGTTTGCAATCAACAGATGGCTAAAGGTTGCCATCTGAATTATTTTATAGGATATTTTAATTGACTC
2481 CATTGTATGGAAACCAAGTGTGAATGTTAAGATGAATTTGCCGTATACCCTTTATCATTCGGTGTCCTTGTACTCAGACT
2561 TTCATGTCCCTGGGTGACCTCAATGTGTTGGTTTGTCTCCATTTAGAAAGGTTGATAATATATTGAATTGTTCAAGATCA
2641 GGAGTTCCAGACTGACCCTCCAGGAAAAAAAAAATCGCAAAGAACAAATTCTTTTTCTGTGTAAAAAACACTGATCCTTT
2721 GGGAATGGGGCGGGAAATGGGAGTAGGACAACATTAACTTTAGCTGTTTTAGTTTCTGAGATTTCATAACCTCAGTAGAC
2801 ACCAGCAAAATTTTCAGTTTCTAACTCCACCACCAATCTCTCCTCAATGAATAAGACTTTAGCAATTTATATAGAATTTG
2881 ATCAGGTAAGAGCGAACCACAATTCTCCTGAACCCTGCTAGAGATTAAGTGGTGGTTCTCACTTCCTCAATGAAAACTTG
2961 CACTGGGGACAGCGCTTGCCTTGGTCAGACCTTCCCACATCTACATACTCTCAAATACATGACCAGGTGATCAAGCAATG
3041 GAAAAATTTGCACCACCGTGTCCCATGAAATTGTTTCAATGTTTAGTTTAGATATTGCTAACTTGTGCTATTAACCTTTT
3121 GACAAGCGTGTAGTATTGTTTGTTTTGGGTTTCTTTTTGATTTATAACTATTTAGTAGTCCCCAGCTAGCTACCAGTACA
3201 GATTTTACCCCATGGGTAGGATTCTATTGTTAAGCCACATAACAAAGCACACTAATTCTGACAACACTGCAAATGGAAAA
3281 TACGAACCAAAAAAAAGTTACACCGATAAGTTCAACAAACTGTCCATTTTTGATATTTGCATGCTCCCCTATGGACTGGC
3361 TGTGGCAATGTAATGCCTGTATAATGTTTTCAAATAAAAATAAATGCTTTATGAAAGCACCGAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' ccATTCTCCTGCCTCAGCCTc 3'
1290 - 1310 156.00 -21.90
2
miRNA  3' ggUAGAAGGAAGUCGGag 5'
            ||||   |||||||  
Target 5' tcATCTCAGTTCAGCCcc 3'
2017 - 2034 136.00 -16.40
3
miRNA  3' gguagaagGAAGUCGGAg 5'
                  :||:||||| 
Target 5' aagaaacaTTTTAGCCTt 3'
640 - 657 130.00 -10.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM7831561 1 COSMIC
COSN30154504 5 COSMIC
COSN14505653 11 COSMIC
COSN31508659 14 COSMIC
COSN30127767 16 COSMIC
COSN30636720 17 COSMIC
COSN31560836 39 COSMIC
COSN31608290 48 COSMIC
COSN31566650 50 COSMIC
COSN31504145 54 COSMIC
COSN30110325 95 COSMIC
COSN30108380 96 COSMIC
COSN30431929 129 COSMIC
COSN31531705 142 COSMIC
COSN8493543 175 COSMIC
COSN30132936 198 COSMIC
COSN6722931 225 COSMIC
COSN31515890 374 COSMIC
COSN2136498 429 COSMIC
COSN9292962 451 COSMIC
COSN24301527 492 COSMIC
COSN1323786 516 COSMIC
COSN8493544 560 COSMIC
COSN31482107 725 COSMIC
COSN14864461 843 COSMIC
COSN31529784 852 COSMIC
COSN7595969 921 COSMIC
COSN20741942 978 COSMIC
COSN7782560 1025 COSMIC
COSN23728416 1187 COSMIC
COSN6722932 1212 COSMIC
COSN21410063 1328 COSMIC
COSN7595970 1424 COSMIC
COSN21793244 1484 COSMIC
COSN14980379 1488 COSMIC
COSN31960005 1527 COSMIC
COSN2136499 1548 COSMIC
COSN2136500 1557 COSMIC
COSN16282792 1580 COSMIC
COSN27629155 1726 COSMIC
COSN31536691 2079 COSMIC
COSN31609738 2179 COSMIC
COSN16363103 2248 COSMIC
COSN31523052 2260 COSMIC
COSN15107706 2445 COSMIC
COSN31778465 2445 COSMIC
COSN8398095 2446 COSMIC
COSN22776148 2531 COSMIC
COSN31484682 2634 COSMIC
COSN31778466 2635 COSMIC
COSN8493545 2663 COSMIC
COSN31516766 2677 COSMIC
COSN6588364 2678 COSMIC
COSN31607205 2761 COSMIC
COSN31489554 2794 COSMIC
COSN31566155 2812 COSMIC
COSN23837535 2873 COSMIC
COSN31962678 2913 COSMIC
COSN9292963 2975 COSMIC
COSN22741147 3085 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs760546073 1 dbSNP
rs1184860544 2 dbSNP
rs561453264 6 dbSNP
rs756396121 7 dbSNP
rs574898691 8 dbSNP
rs749200484 8 dbSNP
rs763122584 10 dbSNP
rs375142407 11 dbSNP
rs375428162 12 dbSNP
rs1311723364 13 dbSNP
rs372224023 17 dbSNP
rs200852408 30 dbSNP
rs768143652 31 dbSNP
rs994831744 32 dbSNP
rs753106734 33 dbSNP
rs200360220 37 dbSNP
rs1200967593 38 dbSNP
rs1277907359 40 dbSNP
rs1029039574 41 dbSNP
rs778052048 42 dbSNP
rs749637447 43 dbSNP
rs756931466 46 dbSNP
rs778475025 48 dbSNP
rs745383451 51 dbSNP
rs186629963 57 dbSNP
rs1455153978 58 dbSNP
rs963790198 65 dbSNP
rs1384186791 74 dbSNP
rs1165765933 77 dbSNP
rs1465234977 89 dbSNP
rs1421611687 95 dbSNP
rs975533157 108 dbSNP
rs1478463547 123 dbSNP
rs1267236324 126 dbSNP
rs552493152 128 dbSNP
rs965220896 137 dbSNP
rs776435938 139 dbSNP
rs989077646 143 dbSNP
rs564711944 160 dbSNP
rs968644208 165 dbSNP
rs1327018992 169 dbSNP
rs1300482547 186 dbSNP
rs978357818 189 dbSNP
rs1451259513 193 dbSNP
rs527311601 209 dbSNP
rs1309538603 212 dbSNP
rs547149641 215 dbSNP
rs983443629 216 dbSNP
rs141729809 233 dbSNP
rs536404146 234 dbSNP
rs941352907 237 dbSNP
rs1466205396 238 dbSNP
rs1377615342 239 dbSNP
rs1174596489 240 dbSNP
rs974130421 242 dbSNP
rs915979448 249 dbSNP
rs549997867 250 dbSNP
rs1056901833 251 dbSNP
rs1235970376 252 dbSNP
rs569905634 252 dbSNP
rs1044892890 258 dbSNP
rs1350378228 269 dbSNP
rs1201600675 276 dbSNP
rs1339495344 277 dbSNP
rs1254837192 279 dbSNP
rs906371114 285 dbSNP
rs1265532455 290 dbSNP
rs939242819 299 dbSNP
rs1460045477 300 dbSNP
rs1313831699 301 dbSNP
rs1303943359 313 dbSNP
rs1445733282 318 dbSNP
rs1052778409 323 dbSNP
rs892417410 339 dbSNP
rs777750538 350 dbSNP
rs1375043176 353 dbSNP
rs538917285 354 dbSNP
rs1333603942 359 dbSNP
rs940857119 366 dbSNP
rs1401595508 384 dbSNP
rs367892238 386 dbSNP
rs1010973855 397 dbSNP
rs1301127636 400 dbSNP
rs1036566943 422 dbSNP
rs1378683852 425 dbSNP
rs542307117 432 dbSNP
rs1021938506 437 dbSNP
rs780106472 443 dbSNP
rs1438203703 456 dbSNP
rs1382490641 460 dbSNP
rs899414728 467 dbSNP
rs1421051551 473 dbSNP
rs1438006170 482 dbSNP
rs1179896415 490 dbSNP
rs995092055 491 dbSNP
rs748707436 492 dbSNP
rs1050386743 499 dbSNP
rs1363051684 501 dbSNP
rs889138146 509 dbSNP
rs1478229953 519 dbSNP
rs1239232567 520 dbSNP
rs1178569476 521 dbSNP
rs1009335392 528 dbSNP
rs1240075134 532 dbSNP
rs1019013563 537 dbSNP
rs1332315788 545 dbSNP
rs760090277 548 dbSNP
rs1376651927 550 dbSNP
rs996562309 563 dbSNP
rs1397985412 576 dbSNP
rs1389362798 585 dbSNP
rs1362879577 586 dbSNP
rs1159458508 592 dbSNP
rs1470336074 594 dbSNP
rs76531026 596 dbSNP
rs1184866569 600 dbSNP
rs1425028231 603 dbSNP
rs955728679 608 dbSNP
rs1257538500 627 dbSNP
rs1215817947 628 dbSNP
rs1335606280 634 dbSNP
rs1234351420 638 dbSNP
rs1004421464 642 dbSNP
rs1285754244 644 dbSNP
rs572319996 655 dbSNP
rs1321980663 656 dbSNP
rs1223003058 659 dbSNP
rs757570109 662 dbSNP
rs535030794 664 dbSNP
rs963017050 666 dbSNP
rs554726918 668 dbSNP
rs150653494 669 dbSNP
rs1398718270 676 dbSNP
rs543559067 678 dbSNP
rs1451978609 681 dbSNP
rs1319435737 683 dbSNP
rs1405138445 690 dbSNP
rs1389642106 695 dbSNP
rs1161110076 703 dbSNP
rs958381441 707 dbSNP
rs1201266883 710 dbSNP
rs747306384 711 dbSNP
rs138786535 720 dbSNP
rs981525399 722 dbSNP
rs1480097280 728 dbSNP
rs1171266698 734 dbSNP
rs769488146 747 dbSNP
rs34689949 748 dbSNP
rs775146152 761 dbSNP
rs775853988 771 dbSNP
rs183907507 774 dbSNP
rs1020255700 781 dbSNP
rs111515894 783 dbSNP
rs913787554 785 dbSNP
rs182031707 786 dbSNP
rs1211888348 794 dbSNP
rs946672262 796 dbSNP
rs1043344184 803 dbSNP
rs762552933 806 dbSNP
rs996510094 809 dbSNP
rs768167448 812 dbSNP
rs546066013 823 dbSNP
rs889392341 829 dbSNP
rs1436315513 845 dbSNP
rs763772626 849 dbSNP
rs944714026 857 dbSNP
rs1050795967 860 dbSNP
rs1325899961 862 dbSNP
rs1343998872 866 dbSNP
rs1040813977 867 dbSNP
rs1169392893 871 dbSNP
rs1223482753 871 dbSNP
rs1009614338 872 dbSNP
rs892510825 872 dbSNP
rs113182136 878 dbSNP
rs1168425954 880 dbSNP
rs890909661 881 dbSNP
rs1244786548 883 dbSNP
rs576168862 907 dbSNP
rs1000008793 917 dbSNP
rs1225257585 918 dbSNP
rs1237795672 933 dbSNP
rs1320114995 936 dbSNP
rs1015781962 940 dbSNP
rs963260761 974 dbSNP
rs1251001655 978 dbSNP
rs1219191933 983 dbSNP
rs995767498 985 dbSNP
rs1357261461 989 dbSNP
rs1224978964 991 dbSNP
rs1235446103 993 dbSNP
rs187640832 1000 dbSNP
rs1330279552 1005 dbSNP
rs1490125001 1013 dbSNP
rs970043962 1015 dbSNP
rs1444030451 1016 dbSNP
rs958907876 1019 dbSNP
rs1328888855 1020 dbSNP
rs1413887742 1022 dbSNP
rs1422935737 1023 dbSNP
rs189830337 1027 dbSNP
rs981474544 1041 dbSNP
rs372092564 1042 dbSNP
rs374282160 1045 dbSNP
rs1194379703 1047 dbSNP
rs1177006729 1050 dbSNP
rs543562505 1054 dbSNP
rs1426227380 1065 dbSNP
rs956170778 1074 dbSNP
rs992505924 1078 dbSNP
rs1368706324 1081 dbSNP
rs1233549667 1086 dbSNP
rs182106469 1090 dbSNP
rs1209483359 1093 dbSNP
rs988354389 1102 dbSNP
rs1441234976 1114 dbSNP
rs913746894 1119 dbSNP
rs1412416315 1125 dbSNP
rs1283088384 1135 dbSNP
rs1426212220 1140 dbSNP
rs1212147235 1143 dbSNP
rs531414502 1150 dbSNP
rs1043623909 1161 dbSNP
rs1024395075 1162 dbSNP
rs1307476330 1163 dbSNP
rs1237534080 1164 dbSNP
rs1375038979 1166 dbSNP
rs921214630 1167 dbSNP
rs547371505 1171 dbSNP
rs932307617 1173 dbSNP
rs560767739 1175 dbSNP
rs961789232 1176 dbSNP
rs1364616956 1179 dbSNP
rs1314663064 1180 dbSNP
rs371139659 1181 dbSNP
rs11293041 1182 dbSNP
rs1181428264 1182 dbSNP
rs1212259610 1182 dbSNP
rs1218347901 1182 dbSNP
rs1227328581 1182 dbSNP
rs1284383585 1182 dbSNP
rs1284501230 1182 dbSNP
rs1294552842 1182 dbSNP
rs1376349549 1182 dbSNP
rs1394191287 1182 dbSNP
rs1395999308 1182 dbSNP
rs1408948608 1182 dbSNP
rs1471845590 1182 dbSNP
rs1488220294 1182 dbSNP
rs746858890 1182 dbSNP
rs750456780 1182 dbSNP
rs761208815 1182 dbSNP
rs13199958 1183 dbSNP
rs1380629740 1186 dbSNP
rs1295010711 1187 dbSNP
rs867727550 1188 dbSNP
rs1296162412 1200 dbSNP
rs1455152586 1202 dbSNP
rs1248528093 1204 dbSNP
rs1289851633 1205 dbSNP
rs1358484163 1206 dbSNP
rs1335565585 1207 dbSNP
rs1262450569 1208 dbSNP
rs1484823287 1209 dbSNP
rs529805167 1211 dbSNP
rs1256292797 1212 dbSNP
rs549935296 1219 dbSNP
rs1462490618 1220 dbSNP
rs565429334 1220 dbSNP
rs1445918507 1223 dbSNP
rs1037574794 1227 dbSNP
rs569842959 1228 dbSNP
rs920740375 1229 dbSNP
rs995713245 1230 dbSNP
rs1023212295 1232 dbSNP
rs149360250 1237 dbSNP
rs552152595 1241 dbSNP
rs532605657 1243 dbSNP
rs113514431 1244 dbSNP
rs1465157171 1245 dbSNP
rs554947877 1250 dbSNP
rs568159122 1251 dbSNP
rs559840970 1252 dbSNP
rs1213840053 1256 dbSNP
rs979263888 1258 dbSNP
rs186827591 1270 dbSNP
rs773104410 1274 dbSNP
rs1307981011 1275 dbSNP
rs1240715911 1278 dbSNP
rs932591275 1279 dbSNP
rs576996698 1280 dbSNP
rs546004340 1281 dbSNP
rs1462276848 1283 dbSNP
rs553342497 1284 dbSNP
rs903976012 1287 dbSNP
rs1462990299 1288 dbSNP
rs573477416 1290 dbSNP
rs939728475 1293 dbSNP
rs1455846519 1295 dbSNP
rs542198687 1299 dbSNP
rs1193888054 1302 dbSNP
rs560922678 1303 dbSNP
rs1247861148 1311 dbSNP
rs1196999569 1312 dbSNP
rs529740660 1313 dbSNP
rs753721939 1314 dbSNP
rs1417692632 1317 dbSNP
rs1208569479 1325 dbSNP
rs1044605775 1334 dbSNP
rs906090471 1335 dbSNP
rs1407401248 1336 dbSNP
rs1003139317 1337 dbSNP
rs543511455 1342 dbSNP
rs9489335 1343 dbSNP
rs532302684 1345 dbSNP
rs778190412 1346 dbSNP
rs9489336 1350 dbSNP
rs968797953 1351 dbSNP
rs796863194 1355 dbSNP
rs971749684 1355 dbSNP
rs979213232 1358 dbSNP
rs1183429067 1361 dbSNP
rs1185751941 1364 dbSNP
rs1419165920 1364 dbSNP
rs565785595 1364 dbSNP
rs1486583564 1365 dbSNP
rs953932661 1366 dbSNP
rs1215587223 1374 dbSNP
rs1348895249 1377 dbSNP
rs34624183 1377 dbSNP
rs771502817 1377 dbSNP
rs365232 1378 dbSNP
rs381999 1379 dbSNP
rs568092145 1380 dbSNP
rs13214732 1381 dbSNP
rs1356622548 1382 dbSNP
rs944946474 1385 dbSNP
rs1387521043 1388 dbSNP
rs571070198 1389 dbSNP
rs557003005 1390 dbSNP
rs972836552 1391 dbSNP
rs1258136320 1392 dbSNP
rs570623287 1394 dbSNP
rs188301507 1395 dbSNP
rs1043740776 1396 dbSNP
rs1044553918 1397 dbSNP
rs538500837 1398 dbSNP
rs927452887 1399 dbSNP
rs938874677 1400 dbSNP
rs1057373401 1401 dbSNP
rs1429154525 1402 dbSNP
rs1181867514 1404 dbSNP
rs892072131 1405 dbSNP
rs866302257 1406 dbSNP
rs997633304 1407 dbSNP
rs1043469841 1408 dbSNP
rs375282155 1409 dbSNP
rs369065886 1410 dbSNP
rs1193588226 1412 dbSNP
rs747099656 1413 dbSNP
rs1451314024 1415 dbSNP
rs1185686037 1417 dbSNP
rs894314741 1421 dbSNP
rs1468968426 1422 dbSNP
rs996226789 1423 dbSNP
rs573391830 1424 dbSNP
rs1174858856 1427 dbSNP
rs1028076204 1430 dbSNP
rs542486483 1431 dbSNP
rs556114592 1434 dbSNP
rs574448830 1435 dbSNP
rs1441247927 1436 dbSNP
rs543449055 1439 dbSNP
rs1453588189 1440 dbSNP
rs1347127698 1441 dbSNP
rs972401100 1443 dbSNP
rs563323513 1445 dbSNP
rs952405682 1447 dbSNP
rs371704107 1448 dbSNP
rs1440124404 1449 dbSNP
rs1274308911 1450 dbSNP
rs927063856 1459 dbSNP
rs1200328244 1460 dbSNP
rs760406097 1465 dbSNP
rs1027323891 1466 dbSNP
rs938851287 1467 dbSNP
rs1057489680 1468 dbSNP
rs1439374612 1473 dbSNP
rs193191262 1477 dbSNP
rs559485807 1478 dbSNP
rs528305644 1479 dbSNP
rs530511332 1480 dbSNP
rs904536795 1482 dbSNP
rs115789452 1483 dbSNP
rs1175616357 1484 dbSNP
rs755196422 1484 dbSNP
rs1471208584 1487 dbSNP
rs283048 1488 dbSNP
rs1475784267 1492 dbSNP
rs1008040829 1493 dbSNP
rs1282957375 1501 dbSNP
rs1055638201 1503 dbSNP
rs918034763 1506 dbSNP
rs1283128649 1513 dbSNP
rs949913276 1520 dbSNP
rs1279594039 1527 dbSNP
rs1045605477 1532 dbSNP
rs1353459988 1535 dbSNP
rs1314555283 1536 dbSNP
rs1019881373 1539 dbSNP
rs369393706 1542 dbSNP
rs1415163903 1549 dbSNP
rs752718144 1554 dbSNP
rs1157209885 1558 dbSNP
rs897704954 1581 dbSNP
rs993420818 1583 dbSNP
rs1164259651 1598 dbSNP
rs994499703 1607 dbSNP
rs1474538511 1609 dbSNP
rs1026611549 1616 dbSNP
rs1260228384 1620 dbSNP
rs1189190042 1622 dbSNP
rs1409650475 1625 dbSNP
rs3734345 1628 dbSNP
rs1240676116 1629 dbSNP
rs979794393 1637 dbSNP
rs550556954 1640 dbSNP
rs778121729 1643 dbSNP
rs570551416 1645 dbSNP
rs927011789 1646 dbSNP
rs768281661 1670 dbSNP
rs1007249562 1675 dbSNP
rs1017758735 1677 dbSNP
rs992982512 1678 dbSNP
rs913401225 1685 dbSNP
rs1361037767 1687 dbSNP
rs747503562 1688 dbSNP
rs879398507 1691 dbSNP
rs1345983812 1703 dbSNP
rs1021081695 1710 dbSNP
rs868536114 1716 dbSNP
rs774054951 1720 dbSNP
rs1246339816 1722 dbSNP
rs946282883 1723 dbSNP
rs1459949692 1724 dbSNP
rs978982453 1742 dbSNP
rs539906175 1743 dbSNP
rs377638111 1748 dbSNP
rs866013865 1749 dbSNP
rs1220633989 1754 dbSNP
rs1032281883 1756 dbSNP
rs1428402558 1757 dbSNP
rs185526469 1769 dbSNP
rs761529080 1785 dbSNP
rs1248254457 1788 dbSNP
rs1448033579 1803 dbSNP
rs1050408789 1810 dbSNP
rs917989497 1812 dbSNP
rs1274449972 1813 dbSNP
rs890520468 1828 dbSNP
rs944798862 1834 dbSNP
rs1195925469 1837 dbSNP
rs1293234385 1838 dbSNP
rs949497285 1840 dbSNP
rs1365578821 1849 dbSNP
rs1302972607 1850 dbSNP
rs1438923527 1859 dbSNP
rs1396826475 1860 dbSNP
rs1326629334 1862 dbSNP
rs1461966938 1864 dbSNP
rs1353257760 1870 dbSNP
rs371442060 1873 dbSNP
rs981236567 1879 dbSNP
rs781477769 1885 dbSNP
rs919103726 1890 dbSNP
rs1394795111 1893 dbSNP
rs1192640681 1905 dbSNP
rs1452137400 1911 dbSNP
rs1254376404 1916 dbSNP
rs1448926850 1919 dbSNP
rs567023585 1923 dbSNP
rs1387245088 1925 dbSNP
rs896982491 1927 dbSNP
rs994053757 1928 dbSNP
rs35236421 1929 dbSNP
rs1026895182 1933 dbSNP
rs1206472021 1934 dbSNP
rs887722066 1935 dbSNP
rs1279294343 1936 dbSNP
rs1232424333 1937 dbSNP
rs1385378195 1947 dbSNP
rs1402413011 1950 dbSNP
rs888390406 1951 dbSNP
rs1371190859 1969 dbSNP
rs1392836187 1971 dbSNP
rs1001177706 1974 dbSNP
rs1038736919 1975 dbSNP
rs1462900619 1976 dbSNP
rs768291905 1990 dbSNP
rs145663186 1992 dbSNP
rs187948511 1993 dbSNP
rs959785522 2000 dbSNP
rs992993067 2004 dbSNP
rs566241652 2006 dbSNP
rs967944006 2009 dbSNP
rs576009926 2011 dbSNP
rs766882744 2020 dbSNP
rs1021052006 2022 dbSNP
rs1380069600 2038 dbSNP
rs530984636 2044 dbSNP
rs1284023422 2046 dbSNP
rs1001013405 2048 dbSNP
rs147314245 2060 dbSNP
rs959655378 2062 dbSNP
rs1350409560 2066 dbSNP
rs1256816131 2070 dbSNP
rs1238529159 2075 dbSNP
rs551288736 2076 dbSNP
rs556989342 2076 dbSNP
rs1282701770 2083 dbSNP
rs79688889 2086 dbSNP
rs986063497 2091 dbSNP
rs1311500743 2094 dbSNP
rs1417001263 2102 dbSNP
rs1204345186 2104 dbSNP
rs1172826746 2112 dbSNP
rs1452556563 2117 dbSNP
rs1245228930 2121 dbSNP
rs1160629080 2130 dbSNP
rs1472911742 2148 dbSNP
rs867167134 2155 dbSNP
rs911888505 2160 dbSNP
rs192527970 2167 dbSNP
rs1187072094 2171 dbSNP
rs1036851104 2173 dbSNP
rs183499178 2174 dbSNP
rs572959692 2178 dbSNP
rs1048276952 2179 dbSNP
rs1156754027 2189 dbSNP
rs1411053901 2193 dbSNP
rs1291980972 2198 dbSNP
rs1235631579 2204 dbSNP
rs541669219 2222 dbSNP
rs888336457 2239 dbSNP
rs1318041453 2240 dbSNP
rs115906479 2241 dbSNP
rs1382310460 2254 dbSNP
rs918694892 2255 dbSNP
rs1294856031 2267 dbSNP
rs929096310 2269 dbSNP
rs1416452188 2277 dbSNP
rs1162731524 2281 dbSNP
rs1033983001 2282 dbSNP
rs148780672 2288 dbSNP
rs1192171380 2289 dbSNP
rs1445551802 2297 dbSNP
rs1403236726 2308 dbSNP
rs1209520452 2311 dbSNP
rs1451513796 2324 dbSNP
rs188230356 2324 dbSNP
rs1329104069 2326 dbSNP
rs1216143572 2329 dbSNP
rs564116934 2333 dbSNP
rs943338673 2339 dbSNP
rs533192914 2345 dbSNP
rs1039102035 2348 dbSNP
rs1328498102 2349 dbSNP
rs901536857 2354 dbSNP
rs1435302247 2356 dbSNP
rs1241541331 2362 dbSNP
rs933046638 2367 dbSNP
rs1407060259 2370 dbSNP
rs1042096313 2378 dbSNP
rs1167177755 2381 dbSNP
rs1474304145 2385 dbSNP
rs902282369 2388 dbSNP
rs557818707 2399 dbSNP
rs1189494425 2402 dbSNP
rs1329026973 2410 dbSNP
rs1453971269 2421 dbSNP
rs967176082 2425 dbSNP
rs1195570588 2431 dbSNP
rs978874796 2432 dbSNP
rs142402325 2447 dbSNP
rs1194527132 2466 dbSNP
rs566859160 2474 dbSNP
rs895381909 2477 dbSNP
rs1012531445 2486 dbSNP
rs766460468 2488 dbSNP
rs1300700675 2489 dbSNP
rs543501166 2495 dbSNP
rs1328110911 2496 dbSNP
rs1331107233 2496 dbSNP
rs912185806 2501 dbSNP
rs966431239 2523 dbSNP
rs558724434 2524 dbSNP
rs994184213 2527 dbSNP
rs113605943 2528 dbSNP
rs538525099 2530 dbSNP
rs1478405019 2542 dbSNP
rs752872161 2544 dbSNP
rs1484304123 2547 dbSNP
rs745529127 2550 dbSNP
rs1210597964 2558 dbSNP
rs964971880 2565 dbSNP
rs1220534135 2569 dbSNP
rs558519772 2577 dbSNP
rs974710395 2579 dbSNP
rs576748105 2581 dbSNP
rs539077907 2584 dbSNP
rs932957662 2584 dbSNP
rs552993775 2588 dbSNP
rs909721681 2600 dbSNP
rs1308482635 2601 dbSNP
rs1413947856 2612 dbSNP
rs796466208 2617 dbSNP
rs572856055 2618 dbSNP
rs1178534516 2625 dbSNP
rs1415217615 2626 dbSNP
rs139506766 2628 dbSNP
rs1056111231 2632 dbSNP
rs936460508 2635 dbSNP
rs1413336197 2641 dbSNP
rs1187769638 2643 dbSNP
rs1484901745 2646 dbSNP
rs1239525116 2655 dbSNP
rs1054352357 2665 dbSNP
rs1211853882 2665 dbSNP
rs201408373 2665 dbSNP
rs181190089 2666 dbSNP
rs185019581 2668 dbSNP
rs1330523721 2672 dbSNP
rs1288924680 2673 dbSNP
rs1304336536 2675 dbSNP
rs1353364697 2675 dbSNP
rs895764346 2677 dbSNP
rs143232101 2678 dbSNP
rs1041399281 2685 dbSNP
rs1458888246 2689 dbSNP
rs189946402 2692 dbSNP
rs57170404 2696 dbSNP
rs764193531 2698 dbSNP
rs952764815 2699 dbSNP
rs1472962784 2703 dbSNP
rs548049174 2711 dbSNP
rs1241165113 2722 dbSNP
rs560579538 2724 dbSNP
rs529361230 2726 dbSNP
rs549535437 2727 dbSNP
rs200382175 2732 dbSNP
rs1007715480 2733 dbSNP
rs1019601068 2735 dbSNP
rs1213035826 2736 dbSNP
rs964552108 2740 dbSNP
rs752013737 2745 dbSNP
rs757747663 2747 dbSNP
rs923176235 2753 dbSNP
rs1252138046 2754 dbSNP
rs1360930389 2757 dbSNP
rs919272623 2762 dbSNP
rs952070682 2767 dbSNP
rs1437481052 2786 dbSNP
rs1389503541 2787 dbSNP
rs569453947 2794 dbSNP
rs926731093 2798 dbSNP
rs937145909 2804 dbSNP
rs1490451024 2806 dbSNP
rs1352123214 2812 dbSNP
rs1166028302 2814 dbSNP
rs1409765982 2816 dbSNP
rs1417753049 2821 dbSNP
rs1186318504 2828 dbSNP
rs1450911569 2832 dbSNP
rs1201519851 2836 dbSNP
rs923640518 2839 dbSNP
rs1487503011 2840 dbSNP
rs146666892 2845 dbSNP
rs1432126063 2848 dbSNP
rs1053518987 2852 dbSNP
rs917129270 2856 dbSNP
rs950009688 2863 dbSNP
rs1041740340 2872 dbSNP
rs1230935726 2873 dbSNP
rs902857351 2882 dbSNP
rs1374272748 2887 dbSNP
rs1302860660 2892 dbSNP
rs1369752162 2893 dbSNP
rs1294655712 2894 dbSNP
rs552068605 2895 dbSNP
rs754878605 2903 dbSNP
rs1353165406 2919 dbSNP
rs948212961 2928 dbSNP
rs1431310601 2930 dbSNP
rs999856688 2933 dbSNP
rs1460190123 2951 dbSNP
rs1390396952 2956 dbSNP
rs867659683 2964 dbSNP
rs1047004164 2965 dbSNP
rs906781919 2966 dbSNP
rs994454697 2968 dbSNP
rs1480249532 2973 dbSNP
rs115434341 2974 dbSNP
rs888892590 2975 dbSNP
rs888470934 2980 dbSNP
rs1279901040 2987 dbSNP
rs1231273715 2990 dbSNP
rs879440101 2993 dbSNP
rs140213469 2999 dbSNP
rs543413610 3000 dbSNP
rs552692461 3002 dbSNP
rs1296445109 3005 dbSNP
rs1328243143 3009 dbSNP
rs966662745 3013 dbSNP
rs145603135 3022 dbSNP
rs535155092 3025 dbSNP
rs1359895448 3032 dbSNP
rs1375159252 3039 dbSNP
rs773120119 3042 dbSNP
rs954618128 3044 dbSNP
rs1378897604 3058 dbSNP
rs1289534814 3059 dbSNP
rs1409673038 3061 dbSNP
rs35986535 3068 dbSNP
rs1488146168 3074 dbSNP
rs74837722 3080 dbSNP
rs1483275382 3081 dbSNP
rs1026608491 3106 dbSNP
rs952020044 3117 dbSNP
rs1205618806 3128 dbSNP
rs1263312121 3129 dbSNP
rs1426210558 3130 dbSNP
rs1187549568 3138 dbSNP
rs984820416 3146 dbSNP
rs1198988378 3148 dbSNP
rs186764292 3149 dbSNP
rs1445647695 3154 dbSNP
rs1165806230 3156 dbSNP
rs559981267 3157 dbSNP
rs1238413926 3160 dbSNP
rs747793562 3165 dbSNP
rs1030897145 3178 dbSNP
rs575061174 3179 dbSNP
rs1486100571 3180 dbSNP
rs1457876896 3183 dbSNP
rs1289961686 3187 dbSNP
rs1387307636 3189 dbSNP
rs12204008 3197 dbSNP
rs1393973286 3199 dbSNP
rs1403883317 3200 dbSNP
rs917095257 3204 dbSNP
rs181972459 3216 dbSNP
rs989561069 3217 dbSNP
rs977363111 3223 dbSNP
rs924565030 3224 dbSNP
rs1383739494 3227 dbSNP
rs935654373 3234 dbSNP
rs1416961424 3255 dbSNP
rs35608655 3269 dbSNP
rs1185128875 3277 dbSNP
rs34758199 3277 dbSNP
rs577854291 3284 dbSNP
rs1310366030 3285 dbSNP
rs1209943388 3289 dbSNP
rs1270044783 3289 dbSNP
rs1320889166 3300 dbSNP
rs1260054544 3305 dbSNP
rs1282851220 3306 dbSNP
rs1247453475 3307 dbSNP
rs1216487703 3308 dbSNP
rs1313021431 3309 dbSNP
rs1262364071 3315 dbSNP
rs1362452920 3323 dbSNP
rs1484607596 3335 dbSNP
rs888836922 3340 dbSNP
rs1321946085 3342 dbSNP
rs982294660 3345 dbSNP
rs1161320704 3347 dbSNP
rs928146185 3356 dbSNP
rs1243395875 3360 dbSNP
rs1462413487 3361 dbSNP
rs1368778942 3368 dbSNP
rs1192787846 3372 dbSNP
rs1447849387 3379 dbSNP
rs185205471 3382 dbSNP
rs1181335067 3383 dbSNP
rs930192909 3388 dbSNP
rs1412163325 3392 dbSNP
rs74969456 3405 dbSNP
rs1212106322 3409 dbSNP
rs1040904522 3412 dbSNP
rs1357539076 3420 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 222553.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAGGAAGUCGGAg 5'
            | | |:|| | |||| 
Target 5' acACCAUUCUCCUGCCUc 3'
5 - 22
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000360388.4 | 3UTR | AUUCACACCAUUCUCCUGCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000360388.4 | 3UTR | AUUCACACCAUUCUCCUGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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