pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol KLHL15   
Synonyms HEL-S-305
Description kelch like family member 15
Transcript NM_030624   
Expression
Putative miRNA Targets on KLHL15
3'UTR of KLHL15
(miRNA target sites are highlighted)
>KLHL15|NM_030624|3'UTR
   1 TGACATCCTCCTCCCTAAAAAAAGAGGCAAACAAAGTATTTGTTTGCACAGAGTAATTAATTAAAACATATAAAGAAAAA
  81 CCTCACCAGTTTTACTATCAAAGCCATTGGTCTAACATTGTAAGAATTTTTCATTCTGTGCTAGCATCCTTTTTTTCTTT
 161 TCAGTGGCCTCAAACTCATGCAATAAGTTAATTCTAAGTGCTAGCTCTTGAAACTACTTCCAGAAGCAGTTGAATAGAAT
 241 GCTCCACTTATCTGGGATATTGATTTTCTGCTTTAAACATTTCTTTCAGATGTTAGCGTAGGAGTCATGTGTCTTCTAAG
 321 AGAAGACCCGATAAGTGTCACTGGATGTGATTTCAGTCTCTGTCTCTATCTGAAACCTTTTTGAAGATTTATTTCAGTGT
 401 ATTTCAGTCTGTTATACTTTTTAGTTTTATTATTTAAAAGTTTAAAACTCTTGACCTTTTTGCATGGCTTTTTGCTGAAA
 481 ATGCAAAAATATAAATTTTCTACAAAATTAACTTTTTATATTCAAAACACTATTTCTAAGCTGCCTTCTCTTATCCGCAT
 561 TGTGTTAGTGAAAGCATATTCATACTCGCATACAACCTATAAATACACAAGGCACATCCCTTTTATGCGTGGTTAGGATT
 641 CTATATTTTTAAGCTAGTGCACTTACTTGCACACACAGTTCGCCATACTTGTTGAATTTTAGATGTAACGTCTTTTCACA
 721 TATTAACATTTTTAGAAAGTTGAAATAACTGGAGTCCTCATTTGCTATCAAAGTAGCCTATCTTCAGTCCATACTGATTC
 801 AGTAATATTTGAACTCCTTATATTTCTGAAACATGTATGGTTATGAAAACTAACACTTTATATTTTATTTTCAAAAGTAA
 881 ATGTTAGTGTTCTTTGTCGATGTATGTCTTTTCTTTTTGAAAATGTTTTTCTTTGCAGTCTGTTTAACGTTACCCTGTTT
 961 TTAGTGAGAATCGGAGTGGTATATGACAAGTTCTGGCCCTGCAGCATGCAAGCACTTTTAAAGAGCATTTAGGTAATACC
1041 AGACTCCTAAATCAAGGCCCCTTAAAAGTAAGTGCAACTCCCATTTTTTACATTCAGTAAGGCTGCTGCATTTGTTATTG
1121 AATGGAAGGTAGAAACTCTTAGAAAATTTGACCTCAGTTTTGACTTAGAGGTAAGAAATAGAATTATAATGTTACTGGTT
1201 TTATCTACTTGTTTATTTTGTACAAAATACCCAGCGACACTAGGGATGTAAGCCCTCAGTTTTTGTTTTATTTACTGAAA
1281 GCTATTAGCATGAAGGATAGTAACCACAAAGTTCAGAATGGATCAAGAATAGCTGTTTAAAAGCATTTATAATAAGTGTT
1361 TTAGGATTAGCTGCACCTTTCAACTCTTTAAATGCAGAGGAAAAAACATAGTTGACAAAGTTAAGCAAGAATAACCTGGG
1441 AGTGGATCATTGAAATTGATGCCATTTGCGCATGAGTAGTCTATATCTGATACAGACTAGATCTATACTGGCAAAACTTG
1521 CCAGATCTTAGAATATTGGTGCAATATTGCAATGCCTTCTATATGGCTGCTGATGTATAAATTTTCTAGTTTCACTTTGT
1601 TTGGTGTTTTTTGTTTTTTTGTTTGTTTGTTTGTTTTTTTGCTGCTGCCACCATTGAACATAAAATGGAAGTGTGAAGTC
1681 ATGGAAATGTGAAGACTTTGGTTTTTGGGGGTTTTTTGGGCAGTTATTAGACATACTATGAGATTAAACCTGATCTTCAA
1761 ACTCCAGAATTGGAGGCATTTGGGTTTAAGAAACCAGGTACATAAGTAGCTTTTGAAAAAACCATTGGCATTGATTTCAA
1841 AAATCAATAATAATCTTATTTTATATATGAGACTTATATTTTCATTAACTAGTCCTGTCATTTACTTACAGTTTCCAAAC
1921 ATGAAATTTGGTATCTTGTTTCCCATGGTAATATGGGTAAAAGTCTTTTTCTACATTTAAAAAATACATTATTTTATTTT
2001 TGAAAGTTAGGAATAAGTTAGCCATTTAATTTTTTTCTACATTAGTTTAGTGGCTTTGTATGTGTGCTATTTTGCTTTAA
2081 AGAAAATAACGTCTTCATTATTTTCCTCATTGATGTCTTTTGCTAGAAAAGACCAAGAAAGAGCCATCAGGCCAGGTATC
2161 CACATCAAAGCCTTTACACTATAGTGGTGGTTCTCTTTAATTGCTTAGATATGACTTCATGACCCTAGTCAGGGTGACAT
2241 CTGGGCAAACATTTGAGTATTCTTGGTCTTCCATTTTAAAGACAGAGGCCAAGATCAAAGTTCATGTTTTGTAAAATTCG
2321 TAAAATCTTAACTTGAACTAACTCTGGGTTCAGCTTTACGTAAGTCACGTCGGACCTGATGTTAGCTGTAATCAGTTTTG
2401 AGCTTTAAGGATAGTTGCTGTTGCTTGGGTTCTGAATGTATGAGAAAACTCCCTGTTTATATGTAGTTCTAATTTAGGTT
2481 ATTTTAAATCCATGATTAACTTACATTCCCTTTTAAAATTATGGTTTTATTGCTGCAAGAGATTTATTTTTGTTATACTA
2561 AACTATGGAAAAGTTTTTCATAGCATTTTTTTCAAGTTTATTTTTTGTGTGCTTCATTTGGAGTTTTTGTTTATATACAT
2641 TGCGCTCAAAAAAGTAGTTTTTTGAAAAATTCAGTAAGATTTGAATCTATACAGTTTAACTGTTATGACCTTTATGCGTG
2721 TTGTTTTCACTTTATATCTCAAATGCCAGAGTTCACAAAAATAGCTGATCTTCATTAATTACATCTTAATTAGAACCATT
2801 TGTTCTCTTCCGTGTCTTTGACCTTCTAAGTTTTGATTTTAAAGAAATTCCTTGCACTACAGCCTTTTCTTAAAATGCAA
2881 GATTCTCACTTTGAAGGTTTTGTGTTGGAAGAAATGCTACTGGTTTTTAAAAAGCAAAGCTTAACTAATAGAATTATTAG
2961 CTTTTCTTGAGACAGCTTTCTGTGTCCTCATTACTCTGCTCTGTGTGAGTGTTACTAGAATTTGTGAAATACTGACTGAG
3041 CCCTTCACTTATCTTTTCTAAAGCAGCACCTTTGGACACCTCATTCTGGGAAGCCTGCTCGAGTCATAGTAAAGGACACA
3121 CGCTTTATGTGGGGAGAAGTGGTAAAAATGGAGTTTTGTCTTAATTACATGAAACTAAGCTTTAAAATATTTTATAACAG
3201 ATTATTTGAGCTGCATAATCTAAACATGTCAAACGTTCAGTGGGACTATTTTTATATATGTATATGTGGGTGTAGGTCAT
3281 AACATTTCAGTTTATAATATAAATTGTTATTTCAGTTTATAAGCTATCTCTCAGAGGAGACTAGCTCTTTTGAGAATTCA
3361 TAATTTAAAGTTTTAGACTGAAGTAAAATGCAACATAGATAATAGTGTAAATCAGATATAATTGAGGGCTATATGGCAGT
3441 AAAACTGCTAGTGCCAGTTTTCTTGTTTGCCTGTTATACATTTTTGATTTTTGTTTTTGTATTCTGAACATTTTGAGAGA
3521 TCATATGTTTGTTCAATTACATTTAGAGTTGGTTTGGGAATAAATATCTTCTAAAAAGAGATTTATCTTAAAAATGGAAG
3601 TCCTAAAAATTAGTTTATCCAGAGTTTATAAAGTCAAATATTCAGTAGGCATAGACTGGAATAGATAAATTCATGGAAAT
3681 CATATCCTTTCAGTACACCGTATAACTTCAATATTACACAAGTAACATTGAGGAGAATGCCATCAGCTTTGTTCTCCCTT
3761 AAATTCTTTGGTTTTCTTTTTACATTTTGGGAACAACTGCATTTAAAATGTTATTAGTCAGTATATAGTAAGGATTAGGT
3841 GTTTGCTTTCTGAAGGAATGGTCCAGTGAGGTGATTGGGAGAGGTTATTTTCTACCTAACTTGTATATGCCCTATACCTC
3921 TTGGGCATACTTTGTCTATAGAAAAATATTTTGACCTTTAGGTACATTTTGGGCCAGTAGTCAAATAATCCTAGGGCCGA
4001 TATAAAAATCTTAGAATAATTTAAGGTTTGCCTTTTATACCTGTTTTGAAAGCCTTTACATTTTTGTCAGGTAATTTTTC
4081 CCAAGCCGTGGATATAATCTATTCAAACATGTTTATGCTATCCATTCTGTTTTTAAATTGAAAAAAATGTTAAAAGTGTT
4161 TATGAAGAAAAGTTTAAATAAAATATTTTTAATCTTTAAAATATAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agUGGUAACGAUUUCACGUUAa 5'
            | :||||     ||||||| 
Target 5' agAATATTG-----GTGCAATa 3'
1530 - 1546 147.00 -7.40
2
miRNA  3' aguGGUAACGAU--UUCACGUUaa 5'
             || ||   |  ||||||||  
Target 5' ggcCCCTTAAAAGTAAGTGCAAct 3'
1056 - 1079 133.00 -8.76
3
miRNA  3' agUGGUAACGAUU-UCACGUUaa 5'
            | ||| | ||| ||||:||  
Target 5' gcAACATAGATAATAGTGTAAat 3'
3390 - 3412 132.00 -7.90
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1478228760 4 dbSNP
rs532904531 5 dbSNP
rs182471953 7 dbSNP
rs780961925 8 dbSNP
rs1268538479 23 dbSNP
rs1463640021 24 dbSNP
rs747838167 24 dbSNP
rs778491924 24 dbSNP
rs1187973000 29 dbSNP
rs1242977940 32 dbSNP
rs754728995 34 dbSNP
rs1215457589 36 dbSNP
rs754754581 37 dbSNP
rs746683646 39 dbSNP
rs753681944 39 dbSNP
rs779934606 47 dbSNP
rs1218702502 51 dbSNP
rs931811959 53 dbSNP
rs1406279162 97 dbSNP
rs964399585 111 dbSNP
rs1387060694 113 dbSNP
rs1433763927 124 dbSNP
rs1320626391 143 dbSNP
rs756253697 150 dbSNP
rs1262223525 157 dbSNP
rs1206787966 162 dbSNP
rs1463538734 163 dbSNP
rs1266923077 164 dbSNP
rs752935513 166 dbSNP
rs1325079550 167 dbSNP
rs1272676992 183 dbSNP
rs1445364461 204 dbSNP
rs1283198950 210 dbSNP
rs1379655843 216 dbSNP
rs56242532 220 dbSNP
rs1053454351 251 dbSNP
rs1266209045 270 dbSNP
rs935044093 283 dbSNP
rs755043687 286 dbSNP
rs760808190 297 dbSNP
rs1320741114 298 dbSNP
rs982152918 304 dbSNP
rs751639571 308 dbSNP
rs1185723730 309 dbSNP
rs1237070005 311 dbSNP
rs776227242 318 dbSNP
rs1470971823 320 dbSNP
rs1190474696 326 dbSNP
rs146597679 329 dbSNP
rs1172188538 330 dbSNP
rs958847462 331 dbSNP
rs1026435984 335 dbSNP
rs1386539559 335 dbSNP
rs775777707 341 dbSNP
rs1333156398 355 dbSNP
rs1340671360 358 dbSNP
rs993752787 367 dbSNP
rs185198388 370 dbSNP
rs1286208355 375 dbSNP
rs866991965 381 dbSNP
rs1349586038 397 dbSNP
rs1228932244 405 dbSNP
rs1373425180 411 dbSNP
rs1190335204 414 dbSNP
rs962397280 415 dbSNP
rs1278236198 421 dbSNP
rs1015016184 425 dbSNP
rs1009305911 429 dbSNP
rs1486118385 436 dbSNP
rs1213218186 440 dbSNP
rs890500917 448 dbSNP
rs1472447143 449 dbSNP
rs1366039270 453 dbSNP
rs907473785 453 dbSNP
rs750713748 454 dbSNP
rs1447449941 456 dbSNP
rs1171484733 464 dbSNP
rs1375747266 488 dbSNP
rs1436209980 490 dbSNP
rs1305721777 492 dbSNP
rs1247267339 495 dbSNP
rs1410147902 496 dbSNP
rs1050284889 503 dbSNP
rs996075892 523 dbSNP
rs772691908 532 dbSNP
rs1462229474 540 dbSNP
rs893735570 546 dbSNP
rs150462731 556 dbSNP
rs1348598875 557 dbSNP
rs1236809682 567 dbSNP
rs935188436 587 dbSNP
rs1482963643 592 dbSNP
rs779479346 593 dbSNP
rs3829712 594 dbSNP
rs1253371996 596 dbSNP
rs1046187938 597 dbSNP
rs1198702701 603 dbSNP
rs949057054 607 dbSNP
rs926536598 610 dbSNP
rs1455161815 612 dbSNP
rs916278624 631 dbSNP
rs990498727 643 dbSNP
rs937553371 654 dbSNP
rs1389143942 658 dbSNP
rs920850489 659 dbSNP
rs1364959956 662 dbSNP
rs903170349 669 dbSNP
rs1299665160 673 dbSNP
rs771157051 681 dbSNP
rs775195971 689 dbSNP
rs1386147134 704 dbSNP
rs1326452685 711 dbSNP
rs1371848821 712 dbSNP
rs1455097808 714 dbSNP
rs1443169948 719 dbSNP
rs1295731213 723 dbSNP
rs1341721336 729 dbSNP
rs1042134299 740 dbSNP
rs973944793 745 dbSNP
rs1354601904 756 dbSNP
rs962269579 757 dbSNP
rs1254117586 771 dbSNP
rs923201959 778 dbSNP
rs1186088307 782 dbSNP
rs1247099430 799 dbSNP
rs975852800 801 dbSNP
rs56051542 809 dbSNP
rs5925970 814 dbSNP
rs1166953668 826 dbSNP
rs1165630005 829 dbSNP
rs1463143361 835 dbSNP
rs943207026 835 dbSNP
rs954859473 856 dbSNP
rs1318612512 860 dbSNP
rs1361293978 864 dbSNP
rs1382992096 866 dbSNP
rs1297942461 867 dbSNP
rs1389346294 872 dbSNP
rs1339097578 878 dbSNP
rs1028920414 882 dbSNP
rs774012696 883 dbSNP
rs770946002 888 dbSNP
rs1184107831 895 dbSNP
rs1473760891 896 dbSNP
rs1235241946 897 dbSNP
rs996149981 898 dbSNP
rs1266953429 902 dbSNP
rs754662844 917 dbSNP
rs1187925586 919 dbSNP
rs375474258 920 dbSNP
rs1423070616 931 dbSNP
rs917968188 936 dbSNP
rs1188389666 949 dbSNP
rs3813165 952 dbSNP
rs1202612329 972 dbSNP
rs1247669854 973 dbSNP
rs371078072 978 dbSNP
rs1290902125 985 dbSNP
rs1400293886 988 dbSNP
rs984551404 989 dbSNP
rs1294277122 990 dbSNP
rs951919247 998 dbSNP
rs1248795809 1001 dbSNP
rs918913069 1002 dbSNP
rs902370978 1003 dbSNP
rs1046558833 1004 dbSNP
rs949136760 1023 dbSNP
rs894916525 1039 dbSNP
rs1253948484 1044 dbSNP
rs1013050940 1058 dbSNP
rs1482718658 1058 dbSNP
rs935308581 1059 dbSNP
rs958852303 1060 dbSNP
rs1033207872 1061 dbSNP
rs1181388938 1062 dbSNP
rs1408592100 1062 dbSNP
rs1306356040 1087 dbSNP
rs1161371131 1090 dbSNP
rs1429407311 1091 dbSNP
rs1434352066 1096 dbSNP
rs1000266028 1099 dbSNP
rs1377676577 1106 dbSNP
rs903283960 1114 dbSNP
rs779484710 1117 dbSNP
rs1225030973 1135 dbSNP
rs1298579278 1141 dbSNP
rs930973519 1141 dbSNP
rs1234615697 1149 dbSNP
rs998600765 1153 dbSNP
rs1346941578 1156 dbSNP
rs1233451335 1167 dbSNP
rs1481566917 1171 dbSNP
rs192286750 1175 dbSNP
rs1040263603 1177 dbSNP
rs943325151 1179 dbSNP
rs1407004994 1184 dbSNP
rs747956618 1190 dbSNP
rs1397086885 1191 dbSNP
rs973719790 1207 dbSNP
rs1170175379 1209 dbSNP
rs1355423461 1211 dbSNP
rs940836258 1215 dbSNP
rs1444998894 1222 dbSNP
rs1292256392 1225 dbSNP
rs1411465492 1226 dbSNP
rs1369635975 1230 dbSNP
rs1440971930 1232 dbSNP
rs1305227934 1236 dbSNP
rs781322688 1236 dbSNP
rs755201545 1252 dbSNP
rs1339627291 1258 dbSNP
rs1162597169 1266 dbSNP
rs1213833097 1268 dbSNP
rs868440789 1270 dbSNP
rs1273459194 1284 dbSNP
rs186977914 1290 dbSNP
rs867817403 1292 dbSNP
rs1253404551 1296 dbSNP
rs988056452 1319 dbSNP
rs147687619 1337 dbSNP
rs1029035024 1346 dbSNP
rs1194336955 1356 dbSNP
rs758448054 1359 dbSNP
rs1255195463 1374 dbSNP
rs1270030308 1379 dbSNP
rs1447906255 1390 dbSNP
rs750917646 1395 dbSNP
rs1224162685 1413 dbSNP
rs12686878 1418 dbSNP
rs1420713399 1430 dbSNP
rs1411956760 1431 dbSNP
rs1394345297 1441 dbSNP
rs1461567002 1457 dbSNP
rs1289742023 1467 dbSNP
rs184024392 1469 dbSNP
rs1362321661 1470 dbSNP
rs1429594452 1471 dbSNP
rs1270371820 1472 dbSNP
rs1032657776 1483 dbSNP
rs999480022 1484 dbSNP
rs41309551 1486 dbSNP
rs971055058 1508 dbSNP
rs1024786592 1509 dbSNP
rs764405313 1519 dbSNP
rs191107097 1521 dbSNP
rs1275134332 1535 dbSNP
rs1445317774 1536 dbSNP
rs1409437852 1539 dbSNP
rs1242889125 1544 dbSNP
rs894864266 1549 dbSNP
rs139996628 1561 dbSNP
rs1305205234 1571 dbSNP
rs958967486 1573 dbSNP
rs1438270272 1575 dbSNP
rs1347939280 1578 dbSNP
rs1322782146 1581 dbSNP
rs767221147 1604 dbSNP
rs1385842888 1608 dbSNP
rs759284933 1613 dbSNP
rs868310421 1613 dbSNP
rs1156388680 1616 dbSNP
rs1346592364 1617 dbSNP
rs187961161 1617 dbSNP
rs770538787 1621 dbSNP
rs773962238 1621 dbSNP
rs1355782676 1627 dbSNP
rs1235097154 1633 dbSNP
rs762422544 1634 dbSNP
rs1192599233 1635 dbSNP
rs199680569 1637 dbSNP
rs553362160 1637 dbSNP
rs559424437 1637 dbSNP
rs747916137 1637 dbSNP
rs752643571 1637 dbSNP
rs1487681760 1638 dbSNP
rs768826024 1640 dbSNP
rs868546101 1641 dbSNP
rs967453107 1641 dbSNP
rs1486179770 1642 dbSNP
rs866584505 1642 dbSNP
rs1038343444 1648 dbSNP
rs1362543363 1649 dbSNP
rs183716909 1660 dbSNP
rs998262577 1681 dbSNP
rs908136760 1706 dbSNP
rs1051898864 1711 dbSNP
rs1375864086 1719 dbSNP
rs375947514 1735 dbSNP
rs192234356 1736 dbSNP
rs1007416019 1745 dbSNP
rs371561332 1759 dbSNP
rs922019389 1760 dbSNP
rs746004121 1761 dbSNP
rs1352848582 1777 dbSNP
rs958020849 1783 dbSNP
rs1349112772 1784 dbSNP
rs1213462021 1794 dbSNP
rs1303630539 1795 dbSNP
rs1048859584 1800 dbSNP
rs1437772543 1805 dbSNP
rs202211933 1822 dbSNP
rs73486003 1823 dbSNP
rs754207761 1824 dbSNP
rs918973680 1830 dbSNP
rs1395275055 1831 dbSNP
rs1436432219 1843 dbSNP
rs1165930196 1845 dbSNP
rs1431369677 1847 dbSNP
rs1036519343 1855 dbSNP
rs1391902638 1856 dbSNP
rs949809395 1859 dbSNP
rs916899685 1865 dbSNP
rs775867659 1869 dbSNP
rs978516825 1877 dbSNP
rs1348852978 1878 dbSNP
rs764587494 1885 dbSNP
rs1249978712 1887 dbSNP
rs1456210925 1887 dbSNP
rs1339093488 1902 dbSNP
rs1406201499 1905 dbSNP
rs1275690619 1909 dbSNP
rs1466779467 1911 dbSNP
rs756591544 1911 dbSNP
rs1253309025 1930 dbSNP
rs1177763969 1945 dbSNP
rs751236207 1948 dbSNP
rs1013416448 1954 dbSNP
rs959231107 1957 dbSNP
rs1033410125 1962 dbSNP
rs1169628321 1963 dbSNP
rs759688083 1965 dbSNP
rs3073993 1985 dbSNP
rs772021806 1985 dbSNP
rs79127910 1985 dbSNP
rs866134388 1985 dbSNP
rs1388773595 1987 dbSNP
rs1293635563 2004 dbSNP
rs1326257616 2008 dbSNP
rs1272492287 2022 dbSNP
rs1431135206 2022 dbSNP
rs898249922 2028 dbSNP
rs1333325200 2029 dbSNP
rs762454599 2031 dbSNP
rs1213556503 2037 dbSNP
rs1424900970 2048 dbSNP
rs991171166 2062 dbSNP
rs774668784 2069 dbSNP
rs1004287235 2091 dbSNP
rs886658408 2093 dbSNP
rs1052486854 2119 dbSNP
rs771515313 2120 dbSNP
rs1246660482 2129 dbSNP
rs1208689297 2144 dbSNP
rs749582387 2144 dbSNP
rs1428941947 2146 dbSNP
rs922134480 2150 dbSNP
rs1415320498 2155 dbSNP
rs1474842508 2156 dbSNP
rs1165511642 2157 dbSNP
rs1395338603 2159 dbSNP
rs1039193669 2167 dbSNP
rs1459486323 2180 dbSNP
rs936735187 2181 dbSNP
rs547159791 2182 dbSNP
rs1257871579 2208 dbSNP
rs1383180815 2212 dbSNP
rs868670724 2212 dbSNP
rs1280509105 2218 dbSNP
rs978911572 2223 dbSNP
rs978084848 2224 dbSNP
rs967945724 2254 dbSNP
rs188877530 2271 dbSNP
rs1367133165 2283 dbSNP
rs1295248111 2284 dbSNP
rs1236215770 2288 dbSNP
rs1259851914 2300 dbSNP
rs1434344973 2302 dbSNP
rs917838032 2310 dbSNP
rs1020484062 2319 dbSNP
rs149512801 2320 dbSNP
rs965459138 2322 dbSNP
rs1485193475 2325 dbSNP
rs1188632313 2326 dbSNP
rs959180120 2342 dbSNP
rs1033483831 2348 dbSNP
rs1464220545 2354 dbSNP
rs1334336770 2359 dbSNP
rs139195303 2360 dbSNP
rs1018209940 2368 dbSNP
rs962450910 2369 dbSNP
rs1006861499 2372 dbSNP
rs1431976227 2378 dbSNP
rs1414531258 2382 dbSNP
rs1314067003 2384 dbSNP
rs150810894 2402 dbSNP
rs1389236879 2412 dbSNP
rs757797794 2416 dbSNP
rs1305680561 2424 dbSNP
rs1316943671 2451 dbSNP
rs1003881182 2459 dbSNP
rs1241899299 2471 dbSNP
rs1277720431 2492 dbSNP
rs1346930653 2493 dbSNP
rs889004250 2504 dbSNP
rs749999414 2515 dbSNP
rs552037394 2523 dbSNP
rs1176487307 2544 dbSNP
rs1249952881 2546 dbSNP
rs1027987393 2555 dbSNP
rs1160732603 2556 dbSNP
rs775684221 2561 dbSNP
rs994805675 2565 dbSNP
rs1434561738 2580 dbSNP
rs1174643700 2593 dbSNP
rs1361195980 2596 dbSNP
rs1460946383 2597 dbSNP
rs866614639 2602 dbSNP
rs897646877 2613 dbSNP
rs890811231 2639 dbSNP
rs1051956078 2640 dbSNP
rs997697361 2641 dbSNP
rs949758133 2643 dbSNP
rs1180124253 2644 dbSNP
rs1369767282 2654 dbSNP
rs895580980 2654 dbSNP
rs900781970 2659 dbSNP
rs1280483356 2661 dbSNP
rs772189641 2673 dbSNP
rs1305513976 2675 dbSNP
rs1055434195 2693 dbSNP
rs1235403718 2704 dbSNP
rs1039138764 2706 dbSNP
rs1180584278 2709 dbSNP
rs936990582 2717 dbSNP
rs745905085 2718 dbSNP
rs778882055 2729 dbSNP
rs979414113 2736 dbSNP
rs946346343 2741 dbSNP
rs1170408890 2764 dbSNP
rs1272271412 2768 dbSNP
rs1227556160 2769 dbSNP
rs1355618528 2793 dbSNP
rs1466782569 2801 dbSNP
rs1323317938 2802 dbSNP
rs141140207 2803 dbSNP
rs945378138 2812 dbSNP
rs1276205994 2822 dbSNP
rs1393731107 2828 dbSNP
rs1377833868 2840 dbSNP
rs1308214250 2843 dbSNP
rs1411316778 2844 dbSNP
rs1296296761 2857 dbSNP
rs1319896820 2859 dbSNP
rs138545582 2868 dbSNP
rs753670873 2874 dbSNP
rs1168427298 2875 dbSNP
rs778476592 2878 dbSNP
rs756536527 2880 dbSNP
rs937885215 2887 dbSNP
rs1222647932 2902 dbSNP
rs1248639525 2903 dbSNP
rs1370648480 2904 dbSNP
rs1186278906 2914 dbSNP
rs1420590497 2949 dbSNP
rs1163321797 2955 dbSNP
rs1479089566 2961 dbSNP
rs763920948 2963 dbSNP
rs1416561552 2974 dbSNP
rs1018324457 2982 dbSNP
rs753182056 2986 dbSNP
rs1325165698 2990 dbSNP
rs1343069945 2996 dbSNP
rs985388233 3009 dbSNP
rs1289244797 3012 dbSNP
rs527618947 3015 dbSNP
rs1342072948 3037 dbSNP
rs1231401839 3038 dbSNP
rs952821241 3040 dbSNP
rs765996122 3046 dbSNP
rs1228957528 3050 dbSNP
rs1027021659 3051 dbSNP
rs995143374 3059 dbSNP
rs973865973 3060 dbSNP
rs183019435 3068 dbSNP
rs1489449426 3072 dbSNP
rs1014736559 3086 dbSNP
rs1204094638 3094 dbSNP
rs1015326829 3100 dbSNP
rs1014103708 3101 dbSNP
rs982968457 3114 dbSNP
rs895526356 3121 dbSNP
rs955164093 3122 dbSNP
rs1267089355 3124 dbSNP
rs1362274143 3127 dbSNP
rs1055548052 3129 dbSNP
rs1029260843 3142 dbSNP
rs1355992533 3159 dbSNP
rs1320555386 3169 dbSNP
rs996473961 3172 dbSNP
rs1348574755 3176 dbSNP
rs937139962 3180 dbSNP
rs904172617 3188 dbSNP
rs1356343860 3189 dbSNP
rs900731306 3194 dbSNP
rs1257503949 3196 dbSNP
rs1443514005 3201 dbSNP
rs1042754991 3202 dbSNP
rs1288478253 3215 dbSNP
rs1229853502 3216 dbSNP
rs946269037 3219 dbSNP
rs1469161867 3234 dbSNP
rs1178908421 3235 dbSNP
rs913500007 3250 dbSNP
rs1041164103 3251 dbSNP
rs944213689 3259 dbSNP
rs1375760376 3262 dbSNP
rs911429677 3271 dbSNP
rs1017848032 3276 dbSNP
rs1334109823 3286 dbSNP
rs1441531289 3290 dbSNP
rs1310355864 3298 dbSNP
rs952856617 3306 dbSNP
rs1232293661 3310 dbSNP
rs1348171933 3311 dbSNP
rs1307045596 3315 dbSNP
rs1387660307 3325 dbSNP
rs749905189 3326 dbSNP
rs1178698808 3333 dbSNP
rs1292261218 3333 dbSNP
rs1457886053 3337 dbSNP
rs764621043 3341 dbSNP
rs761361085 3350 dbSNP
rs1192571107 3351 dbSNP
rs962236245 3352 dbSNP
rs561320257 3360 dbSNP
rs1014851767 3365 dbSNP
rs1166131421 3370 dbSNP
rs776534166 3375 dbSNP
rs1042460372 3380 dbSNP
rs1465224089 3381 dbSNP
rs1332143370 3389 dbSNP
rs1402468276 3391 dbSNP
rs945422659 3402 dbSNP
rs755973578 3423 dbSNP
rs1034212062 3428 dbSNP
rs190789376 3432 dbSNP
rs1235878488 3438 dbSNP
rs938001485 3448 dbSNP
rs1268990401 3472 dbSNP
rs368563938 3477 dbSNP
rs1043087831 3478 dbSNP
rs1207961147 3480 dbSNP
rs1009915477 3489 dbSNP
rs974011368 3499 dbSNP
rs941191271 3503 dbSNP
rs1190745686 3507 dbSNP
rs1041280029 3515 dbSNP
rs908343975 3517 dbSNP
rs1229641380 3521 dbSNP
rs1172682680 3522 dbSNP
rs752924056 3523 dbSNP
rs1326489132 3526 dbSNP
rs760396355 3531 dbSNP
rs1293224022 3532 dbSNP
rs944327596 3535 dbSNP
rs1388681780 3541 dbSNP
rs1321199567 3556 dbSNP
rs767802160 3557 dbSNP
rs1316682191 3573 dbSNP
rs911378357 3585 dbSNP
rs955263193 3585 dbSNP
rs1340245045 3587 dbSNP
rs1029377674 3595 dbSNP
rs975043260 3605 dbSNP
rs931359960 3614 dbSNP
rs963721772 3618 dbSNP
rs1299715331 3619 dbSNP
rs1265727668 3627 dbSNP
rs1386701064 3635 dbSNP
rs1389934046 3644 dbSNP
rs1202931878 3649 dbSNP
rs775279437 3651 dbSNP
rs1323152517 3656 dbSNP
rs1195822880 3667 dbSNP
rs1255311269 3679 dbSNP
rs1474299494 3691 dbSNP
rs1164189772 3694 dbSNP
rs1017792480 3699 dbSNP
rs920029733 3700 dbSNP
rs41311497 3711 dbSNP
rs1156992501 3713 dbSNP
rs904116235 3717 dbSNP
rs1479154792 3722 dbSNP
rs1021515468 3732 dbSNP
rs1009740113 3749 dbSNP
rs1400957685 3765 dbSNP
rs1300665419 3769 dbSNP
rs973105078 3779 dbSNP
rs1395903143 3814 dbSNP
rs1312819936 3816 dbSNP
rs1322958349 3817 dbSNP
rs961396426 3843 dbSNP
rs1259761967 3844 dbSNP
rs1354201924 3851 dbSNP
rs896537561 3860 dbSNP
rs1391661597 3875 dbSNP
rs1196405270 3882 dbSNP
rs917954866 3905 dbSNP
rs1485306216 3907 dbSNP
rs774527570 3908 dbSNP
rs1256974169 3910 dbSNP
rs1425605446 3912 dbSNP
rs1179972566 3914 dbSNP
rs1002201310 3922 dbSNP
rs1248519566 3931 dbSNP
rs1379916760 3939 dbSNP
rs6629782 3941 dbSNP
rs1420756744 3948 dbSNP
rs905223551 3952 dbSNP
rs1034163038 3953 dbSNP
rs1466007767 3961 dbSNP
rs1210551759 3976 dbSNP
rs746109002 3979 dbSNP
rs1038386440 3983 dbSNP
rs1463137778 3990 dbSNP
rs1380775668 3993 dbSNP
rs1389144643 3995 dbSNP
rs941251548 3996 dbSNP
rs908457939 3999 dbSNP
rs1047304253 4014 dbSNP
rs1241782877 4015 dbSNP
rs1277961235 4016 dbSNP
rs1200665022 4019 dbSNP
rs968841393 4026 dbSNP
rs933863106 4030 dbSNP
rs1257655482 4038 dbSNP
rs1346767276 4041 dbSNP
rs1484314674 4060 dbSNP
rs6629781 4070 dbSNP
rs922355242 4087 dbSNP
rs1237585363 4089 dbSNP
rs1021379080 4094 dbSNP
rs1180705501 4099 dbSNP
rs1393682428 4099 dbSNP
rs1253886880 4101 dbSNP
rs774678442 4114 dbSNP
rs1010440830 4136 dbSNP
rs891455096 4138 dbSNP
rs975158521 4140 dbSNP
rs1330097785 4148 dbSNP
rs1400342461 4151 dbSNP
rs1040716837 4158 dbSNP
rs1300773569 4159 dbSNP
rs766789719 4161 dbSNP
rs1303397800 4162 dbSNP
rs1305711740 4183 dbSNP
rs1217869719 4201 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control PAR-CLIP data was present in GSM545215. RNA binding protein: AGO4. Condition:Control PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 80311.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714646. RNA binding protein: AGO2. Condition:mildMNase ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 80311.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065668. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000328046.8 | 3UTR | AAUAUUGGUGCAAUAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545215
Method / RBP PAR-CLIP / AGO4
Cell line / Condition HEK293 / Control
Location of target site ENST00000328046.8 | 3UTR | AAUAUUGGUGCAAUAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000328046.8 | 3UTR | AUCUAUACUGGCAAAACUUGCCAGAUCUUAGAAUAUUGGUGCAAUAUUGCAAUGCCUUCUAUAUGGCUGCUGAUGUAUAAAUUUUCUAGUUUCACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000328046.8 | 3UTR | AUCUAUACUGGCAAAACUUGCCAGAUCUUAGAAUAUUGGUGCAAUAUUGCAAUGCCUUCUAUAUGGCUGCUGAUGUAUAAAUUUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000328046.8 | 3UTR | CGCAUGAGUAGUCUAUAUCUGAUACAGACUAGAUCUAUACUGGCAAAACUUGCCAGAUCUUAGAAUAUUGGUGCAAUAUUGCAAUGCCUUCUAUAUGGCUGCUGAUGUAUAAAUUUUCUAGUUUCACUUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000328046.8 | 3UTR | AUCUAUACUGGCAAAACUUGCCAGAUCUUAGAAUAUUGGUGCAAUAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM714646
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / mildMNase, repA
Location of target site ENST00000328046.8 | 3UTR | AGAUCUUAGAAUAUUGGUGCAAUAUUGCAAUGCCUUCUAUAUGGCUGCUGAUGUAUAAAUUUUCUAGUUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM1065668
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_7
Location of target site ENST00000328046.8 | 3UTR | AAUAUUGGUGCAAUAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1065669
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_8
Location of target site ENST00000328046.8 | 3UTR | AGACUAGAUCUAUACUGGCAAAACUUGCCAGAUCUUAGAAUAUUGGUGCAAUAUUGCAAUGCCUUCUAUAUGGCUGCUGAUGUAUAAAUUUUCUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000328046.8 | 3UTR | AUCUAUACUGGCAAAACUUGCCAGAUCUUAGAAUAUUGGUGCAAUAUUGCAAUGCCUUCUAUAUGGCUGCUGAUGUAUAAAUUUUCUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.587 1.7e-2 0.620 1.2e-2 13 Click to see details
GSE19350 CNS germ cell tumors 0.543 3.4e-2 0.392 1.0e-1 12 Click to see details
GSE14794 Lymphoblastoid cells 0.179 4.6e-2 0.126 1.2e-1 90 Click to see details
GSE32688 Pancreatic cancer -0.303 4.6e-2 -0.405 1.1e-2 32 Click to see details
GSE42095 Differentiated embryonic stem cells -0.234 1.4e-1 0.118 3.0e-1 23 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.46 2.2e-1 -0.100 4.4e-1 5 Click to see details
GSE28544 Breast cancer 0.165 2.2e-1 0.136 2.6e-1 24 Click to see details
GSE21849 B cell lymphoma -0.147 2.2e-1 0.379 2.1e-2 29 Click to see details
GSE17306 Multiple myeloma -0.108 2.3e-1 0.374 4.1e-3 49 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.127 2.7e-1 0.086 3.4e-1 25 Click to see details
GSE21687 Ependynoma primary tumors 0.06 3.2e-1 -0.096 2.3e-1 64 Click to see details
GSE27834 Pluripotent stem cells 0.112 3.4e-1 0.132 3.1e-1 16 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.093 3.5e-1 -0.289 1.1e-1 20 Click to see details
GSE38226 Liver fibrosis -0.088 3.5e-1 -0.132 2.8e-1 21 Click to see details
GSE26953 Aortic valvular endothelial cells 0.055 4.0e-1 0.108 3.1e-1 24 Click to see details
GSE26953 Aortic valvular endothelial cells 0.055 4.0e-1 0.108 3.1e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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