miRTarBase - #MIRT507147


—
pre-miRNA Information
pre-miRNA hsa-mir-4471   
Genomic Coordinates chr8: 100382763 - 100382845
Description Homo sapiens miR-4471 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4471
Sequence 49| UGGGAACUUAGUAGAGGUUUAA |70
Evidence Experimental
Experiments Illumina
Putative Targets

Gene Information
Gene Symbol GATAD2B   
Synonyms MRD18, P66beta, p68
Description GATA zinc finger domain containing 2B
Transcript NM_020699   
Expression
Putative miRNA Targets on GATAD2B
3'UTR of GATAD2B
(miRNA target sites are highlighted)		 
>GATAD2B|NM_020699|3'UTR
   1 CGCCTGTTCCACTTGTACTGCCCCATCCTTGAATCCTTTATCCCTTTCCTCTTTCATTCCCCCAACTTCTGTCGCATGCA
  81 GTGCCTGTACTGGTGCCTACCATACACGGAAAGCAAAACAGAAAAACAGAAGACAAAAAATAGAGATCAGCAAGAAAACA
 161 CACGCCCTGCCCTGCCACCTCCCCTTTATTTCACACTGCTGCGATCTGTTCTTCTGCCGCTCTGTCTTCTCTCTTCAGTT
 241 TTCTTTAACAGTGAGGTGGATCTTTACCTCTGATAGAGGTCAGAATGAGGTCCTGGGGAGAATCTAAGCCCTCCGATGTG
 321 TGTTTCTAAAGTTGTTTTATGCTATAATTATTACCATTTTTAATGATGTTGTGTGTCCTCCCTTTGTTCAGTGGACGGTT
 401 AAACCTTCCCCCACTCAACCAATCTTTTTCTTTTTCCTTTTCTTCCTTTTTTTTTTTTTTTTTTGTAAACACAAATGACA
 481 TTCAGTTCAATGATACGAGCATTGCAGATTGCAGTAGGGGTCCCAGCTGCCAAGTAGGACATGACTAGGAGTGTTAGGGG
 561 CAGAAGTTTTGAATGCACTTAACCGGAGGAGGGCGCAGGGTGGGGGGTATCAAAGAAGGACGAATAGCACCCTACCTGTG
 641 GGTGTTTGGGGGCTGGACAATTTGGGTGGCAGTGTTTGGTACTGAAGTTGGGCTCTAAGAATGAGGGGAAAGAGCCTGGG
 721 GAGGAGCTTAAAACTCAACCACTCTGGAATTTACCCATAGAAGACGGGAAGAAAGAGGTATGAAGATGGGCTCAATTATG
 801 AGCCAGGGAGGATTGAAACTAGGTCCTGCCTTTCTGTATCTTGGGGAAATAAGACCGATCTCCTGACCCCATTGGGAACA
 881 CGGAAGTCTATTCCAGGCCAACCAGCCCAAAATTATTTCATCTTGTATTCTTTGTAAAATTCTCCCTCACCCCACCCTGC
 961 TTTTAAAAATTCTAATCTATCCCCTCTAACCATAGCCCCATCTATAATACAGAGGAACGGCTGTTCCAAGGCTGTTTGCT
1041 GGGTGTCCCACAAGTTGGGTGGACATAAATGAGTCAAGTGACAACAGGAGGAAATAGACTTAGACGAAAGAAAGGATTTC
1121 TCTTCCAACAGTTGAGATTCGCATATTTGCCTATTCTTTCACCCTCTGAGTGCCAGGAGATGAGAGGCTGGGGGTACACA
1201 ATCAGGTTGGAGTCCTGTCCTTACTCTGCTGCACCAGCTGCAGAACCAACTGCTCAAAGCCAAACAGCTCATGGCAAAAC
1281 CAGCTTAGGACCTCTGCTGTACAAATAGTTGCTTCCCACTGCCCCCCGCCCGCCCCCAGAATGATATTAATTTTGCCTTT
1361 TTTTTTTTTTTTTTTTTAAGCGCTACTAATGTAGAGAATGAATTGAATTGTGCAATGTTGCTGTTCTGGGGACTGGGGAG
1441 ATTAGCATCCCATTTGCCCACACTGTGGGAAGACGGAGTGGACCAGGCTGTTTTTGAAGTAAGGGAAGCCCCTTAAAGGT
1521 ACGGGTTTCTGCTCTTCTCATAGTGTACACCCACCTGCCTCTCTGGCTCCAGAAGCTGCCAGAGTGCACTGGGGGGAATG
1601 TTCTCAGCAGAGAAGAATGAGGAGAAGTTTAATATTTTGCCCTTGAAAGTCACCTGAGGAAGTTTCCCCACTTTTATTTT
1681 TTAAAATTAAGTAATTTTTTAAAGAAGGCACTTTTAAAATTAACACACACATGAACTGCACACCTTCCCCATAAAATTTG
1761 GAGGTGGGGTGGGAGAAAGAGCTAAAATCAGGCTCAGTTCCCCTACTCTGGCCTCTACTCCCCACACCCCAGTGCCACTG
1841 TGGGTGACTATACTGGCCCTACGGGCCTTCCTGGCTTTTTTCTTTCCTCCCTTACCCCAAATTCATTGAGCACTTAAAGG
1921 AGCAGAGATGCAGCCAGTGTCTGGGCTCCCCCAGTGGTGAAATGATCTGGAAGCTAGATGCTAGTAACAGGTAGTGATTG
2001 GGTTTTTTGAGTATTTTTCCGGGGAATGTGGTACCCCTGACTGTAAGTGGTGGGAGAGGGAGGGGGGTTAATGGAACTGG
2081 GTCTGGGATTATTTTAAAATTATATATATATATATAAAGATATATTCTTACATCTTTTCTTTGCCCTCTGTGCTTTGAAA
2161 GCACTGGATAAATTGTTTGGTTTTGCTTTTCTCTCTTCCACAAAATTGGAAGCTTTTTTTAAAAATGTTTTCCCCACAAG
2241 TCATCTTGCCTTGTGGCATGTCTGTCTAGCCTCTTCCTCCCTCCCTCATGATGAAGTGCCATTTCTGTTACGTCTCCCTC
2321 TCCCCAAGCTCAGAGGTGCTCAGAGGTACGAGATGCCCAAGTTTGTCAGTTGAGATTAAAAGTAAGGAACAGAGAATGTG
2401 CAATACCGTCTGGCTGGGGGCTGTCCCTGCCCTGCCCTGAGCTGAGTCCTTTCCCTGGGAGCCAGGCCACCTTAGAATGG
2481 GGTTTGGAAGTAAGATGTATAGAGTTGGGGAATCATGGAGAAGGAAAGCCTATAGTCGAGTGCCTGCTTAGGTGCTGAGG
2561 TCACAGGGGAGATGGTGGAATCTTCCCTGTTTTTATCCCCTCAGGGTCAGTTACATAGAAGCTGCTTCTTGACTAGTATA
2641 GCTCGGTGACCCTTTGTTCAACCGCTGAGGTTTGATTTCTTACCCTTTCTTCTCCCCATTTTCATACTCTTCCCAGGGAT
2721 TAGTGATGGAGGTGAGGTCTCCCTAATCATGGTAAAGTGTTAACCTTCCACCTCCTCCCTTCCCTCCTCCTTCCTCATCC
2801 TTCTGTCTTCCTCAATTCTCCGTCTCTTTTTTTTCATCACTGATTGCCTTGTGTCCCTCCAAGTCTACTTGTTACTATCC
2881 ATCTCCAGGCTCTGGGCCGTGTAGACACTAAACCTCATGCCCTAAGGACAGGAGGAAAGACCCTCTGTTTGGAGCATTAT
2961 TAGTAGAGTGAGGATCCCACCAGTTCTGCCTGGCTTCCTCCATCCCCAGAGGCACTAAAAGCAGTATTTTAAGGTTGGTG
3041 TCTTACTCCCTGGAAGCCTGAAATGGGTGGAATAGCGGTAAGGCTTGAGTAAAACTAGGGGACAGAGGTTCTTATTTGTC
3121 GATTTTATTTTATAATTTGACCACAGCATCTGAACTCCCTCTCTCCCTGGAATAAGTATTTTTCCCACATTTTTGGATAT
3201 ATGTATGGTAGACAATTTTTTTTTAAGACACAGAGATAAATGTTTTCCTGCTTTGGTTACCTTTCCTTTCCCCTTTAAAA
3281 GGAATTAGCTATAGAACTGCTTTGTAAAGATGCTTCTTGATATTTTACTTTTGTTCCTTTTCCCTAATCATTCCCTTTTC
3361 TCCCCACTCCTCCAGAAGGCATAACCCTTCTCTCCACACCCCCTACCCCCACCCCCGTCCTAGGCTCCCATCCTTTCCAT
3441 CAAGACCTTCATTAGCTTATGATATTTGCTGCCGAGATGTTATAACAAGGACTCGTTCATGTATATAAGCTATTTCTTGA
3521 TCCATTTAAAAGGAATTGTACATTGTGTAGAAAAAAAAAAAAACCTGAAAAAGAGAAAAAAAAGCCCTAGCCATGGATAT
3601 TGTGAAACTGTGTTATGTCATTTTGTAATGTGCCCGTTTGTGTATGATCCGTGCAAAAGGGTTTCTGGGGAAGGGGAGGG
3681 GGTAGGGAGGCAGGGCTGTGGAGGGTGGGTAGGGGAGTGGGCCGGGCCCAGCACACTGAGACTGGCAGCTGCTCCAACCC
3761 CATCCCTCCTTAGAGATGCCACCTCCCCCACCACCCACCCCTAATTTGTGCCTTGCCTCCCCACCCTGGAGTAGTCCCTC
3841 CGGGTCACCAGCACTGCCTTGGCAGAGCCCACTCCCTACCCTAACCTGCCCACCCTCCCTATCCCCCAGCATTAGGTTGA
3921 TACTGTGGGGAAGTGCTGGGGGCTGGGAGGTAGCCGAGGAATGGGGCAGTTCCCGGGGGCATCGAAACCAAGTATTATTA
4001 TGAATTGTAATTGTATTTGCACTGTTTTTTTCCTCTGATTGCATCAGCATATATACAATATACCTATATAACAAAATTCA
4081 GTGTCAAGCTTTCTTATGCAAGGGATTTCCCCCACCCCACCTCCTCAAAAAAGAAAGAACCTAGTCTTATGGGCCTTTGA
4161 GGGTGGATTGTCAGGGGATGATAGAAAGGATTTTAATAAGTCATCCTGAGGAAATTTCACCTAGTGAGAGCCACATCCAT
4241 CTGCACAGCCTTAGGCTGCGTGAACCGAGGTGAGGCTGAGCTCCTGTGAAAGCCAAGACCTCCTGGTCCAGGACTTTGTA
4321 GAGTAAAAAGAACCACCAACACAAAAGGGGTTGAGGGGGCTACAATCTGGAGACCTGGGGTCTCCTACTAACTTGCTATA
4401 TGATCTTTGGTAGAGTTAATTTTCTGAGTATCAATTTTCTTATCTGTGAAGTGAAGAGGGGGATCATCTGGCCACCAAGT
4481 TTAAAATTCTATACTTCTCACCTGCCAAAACCAAAAAACAACTTGAGGTGAGGAAAGTGTTGGGCCCAGAAACCAGGGAG
4561 GAACTGAAAGTGACTCGCGTTGAAGTGGTTATGTGTATGACAATGCTCTTGGAGAACTGCCAGTCCTCTATGGTTACCCT
4641 TGATTTGGGAGAGGCAGCAGAGTCATGTCCAGGGCATCAGACCAGTGACATCTTTGCCTTTATGCCTCTAGTCATCTGAG
4721 GGCGGGGACTAGGCCTCAAGCCCCATCTCACAGCCAACCACAGAGCCCTTAAGGGTGGTTGACAATTGAATGCCCCAGGT
4801 TGGTGCTTTAGTTATTTACTCCCTTTGTGAGCTACAGGATGTGTAACTTTTCCCCCATCTTGGTGATAAAATAGGAGAGC
4881 GCAGACACAGCCCACATTTTGTCTCCTTTCCTCAGATTTCATCTGAACCCCGCTAAAGGCAGCTGTTTCACAGTCTGTCT
4961 CCTTCAGGGGCCCAATTTCCCCACAGCCTGGGCTGAGTACTCCTACTCTCTTCTTTAGGTTCTGGGCTGATAAAGCCTGG
5041 AGAGGGTACAGGGTGATGGGTGAAGCCCTGGTGAAGGTGAAAGGATAGATTGGGGTTGGGGGGTGGGGAGCAGGGAGGTG
5121 GGATGGGGAATGGCCTTCCCTGAATAGGGTGGGTGGGAGGGGAACAAGACCCTTTTGCACAACTCTCTTTAAGTTTCCTT
5201 TATTTCTTTTTTAACTCATTCTGATTTTCTGCATTGTGTTTGGGAAATAAAATGAAAAAACTAAGACCAAAAAAAAAAAA
5281 AAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aaUUUGGAGAUGAUUCAAGGGu 5'
            |||:|   :|| ||||||| 
Target 5' taAAATC-AGGCTCAGTTCCCc 3'
 1783 - 1803 155.00 -14.40
2 
miRNA  3' aaUUUGGAGAUGAUUCAAGGGu 5'
            || :|||| :||||||:|| 
Target 5' acAACTCTCT-TTAAGTTTCCt 3'
 5179 - 5199 155.00 -16.20
3 
miRNA  3' aauuuggagaugauUCAAGGGu 5'
                        ||||||| 
Target 5' ccgaggaatggggcAGTTCCCg 3'
 3954 - 3975 140.00 -11.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26977161 18 COSMIC
COSN26977163 51 COSMIC
COSN31576118 61 COSMIC
COSN30181330 69 COSMIC
COSN26977162 89 COSMIC
COSN30144490 103 COSMIC
COSN30500915 126 COSMIC
COSN28865871 163 COSMIC
COSN30534253 194 COSMIC
COSN31554405 199 COSMIC
COSN17845939 219 COSMIC
COSN31554095 293 COSMIC
COSN20095402 446 COSMIC
COSN31523604 447 COSMIC
COSN30544243 527 COSMIC
COSN31595584 537 COSMIC
COSN19446049 619 COSMIC
COSN28670904 642 COSMIC
COSN30539102 649 COSMIC
COSN28788903 775 COSMIC
COSN31585084 1343 COSMIC
COSN19322798 1357 COSMIC
COSN24298046 1508 COSMIC
COSN31537573 1522 COSMIC
COSN22591686 1583 COSMIC
COSN4708826 1672 COSMIC
COSN1406918 1855 COSMIC
COSN31556915 2100 COSMIC
COSN23134305 2101 COSMIC
COSN31482977 2287 COSMIC
COSN28674814 2355 COSMIC
COSN21058564 2404 COSMIC
COSN31533592 2497 COSMIC
COSN24886202 2784 COSMIC
COSN26307412 2883 COSMIC
COSN30210708 3116 COSMIC
COSN22866709 3216 COSMIC
COSN31541795 3495 COSMIC
COSN31534899 3516 COSMIC
COSN22781898 3550 COSMIC
COSN28678689 3550 COSMIC
COSN20095398 3551 COSMIC
COSN31542452 3608 COSMIC
COSN31524560 3658 COSMIC
COSN27627361 4058 COSMIC
COSN21291659 4067 COSMIC
COSN20090362 4219 COSMIC
COSN17182698 4576 COSMIC
COSN20920241 4786 COSMIC
COSN25228358 5104 COSMIC
COSN17580955 5285 COSMIC
COSN31484767 5308 COSMIC
COSN31513970 5395 COSMIC
COSN31546758 5397 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs770726936 1 dbSNP
rs748905334 2 dbSNP
rs773145863 6 dbSNP
rs769572815 8 dbSNP
rs200843810 9 dbSNP
rs747880375 10 dbSNP
rs1258196664 11 dbSNP
rs1047032535 16 dbSNP
rs781255618 17 dbSNP
rs754841298 21 dbSNP
rs745997363 27 dbSNP
rs945580318 36 dbSNP
rs867959746 42 dbSNP
rs1277908324 49 dbSNP
rs764411929 51 dbSNP
rs1293719262 59 dbSNP
rs1053969587 65 dbSNP
rs1159178478 71 dbSNP
rs1380723030 83 dbSNP
rs1387286144 83 dbSNP
rs1297883080 87 dbSNP
rs936914934 96 dbSNP
rs925659771 99 dbSNP
rs772924972 103 dbSNP
rs974360181 107 dbSNP
rs964844455 108 dbSNP
rs911658243 110 dbSNP
rs561408055 117 dbSNP
rs1347991220 122 dbSNP
rs561464254 126 dbSNP
rs1215431679 128 dbSNP
rs1269067393 131 dbSNP
rs1490741491 132 dbSNP
rs1196955525 134 dbSNP
rs896046938 138 dbSNP
rs1419568165 140 dbSNP
rs1183965667 146 dbSNP
rs544884657 150 dbSNP
rs937291411 153 dbSNP
rs1158129819 156 dbSNP
rs1026118662 163 dbSNP
rs1043145049 164 dbSNP
rs575197464 164 dbSNP
rs913052934 169 dbSNP
rs1419786764 171 dbSNP
rs1309864282 182 dbSNP
rs1334512166 187 dbSNP
rs1238715575 196 dbSNP
rs1291897165 198 dbSNP
rs41302143 201 dbSNP
rs1379611639 202 dbSNP
rs1219847559 211 dbSNP
rs761715711 212 dbSNP
rs933260258 216 dbSNP
rs774339605 219 dbSNP
rs866998983 229 dbSNP
rs550277510 247 dbSNP
rs544949338 253 dbSNP
rs1190428289 255 dbSNP
rs1178048864 257 dbSNP
rs1488245035 259 dbSNP
rs577507002 267 dbSNP
rs1385977733 275 dbSNP
rs1267043652 278 dbSNP
rs1033704417 283 dbSNP
rs1161960427 286 dbSNP
rs1002199997 292 dbSNP
rs906500017 293 dbSNP
rs1354572218 306 dbSNP
rs1285897980 310 dbSNP
rs765649152 314 dbSNP
rs1237572942 315 dbSNP
rs921825643 362 dbSNP
rs575779684 369 dbSNP
rs1010028471 370 dbSNP
rs1315096618 371 dbSNP
rs1302359907 373 dbSNP
rs1243304201 377 dbSNP
rs974380159 381 dbSNP
rs892667846 393 dbSNP
rs13375579 396 dbSNP
rs181380883 397 dbSNP
rs1204275645 413 dbSNP
rs983207628 417 dbSNP
rs1462761734 418 dbSNP
rs565462402 420 dbSNP
rs1039904524 422 dbSNP
rs1359399871 424 dbSNP
rs188931681 427 dbSNP
rs1016138979 430 dbSNP
rs1172933913 434 dbSNP
rs1378146659 437 dbSNP
rs1175005393 438 dbSNP
rs1006470687 442 dbSNP
rs1427445259 443 dbSNP
rs1196175972 445 dbSNP
rs1488638765 446 dbSNP
rs1465542435 447 dbSNP
rs1338025426 449 dbSNP
rs1407652191 458 dbSNP
rs78046892 463 dbSNP
rs1014402893 464 dbSNP
rs1215996700 465 dbSNP
rs1293141660 465 dbSNP
rs1362164834 465 dbSNP
rs72694218 465 dbSNP
rs796437951 465 dbSNP
rs896078128 465 dbSNP
rs1203495351 466 dbSNP
rs1395708592 467 dbSNP
rs1486297903 467 dbSNP
rs1484493372 470 dbSNP
rs1257106424 471 dbSNP
rs1477737519 472 dbSNP
rs1232985399 479 dbSNP
rs1177607472 481 dbSNP
rs567264612 493 dbSNP
rs1432011157 495 dbSNP
rs911507234 496 dbSNP
rs1345314980 497 dbSNP
rs987244015 504 dbSNP
rs1286820314 508 dbSNP
rs1339445575 518 dbSNP
rs1405264191 531 dbSNP
rs1279674264 533 dbSNP
rs950513538 535 dbSNP
rs1218615444 540 dbSNP
rs1277972109 541 dbSNP
rs1317653989 551 dbSNP
rs1034561440 576 dbSNP
rs1284066864 583 dbSNP
rs919132912 584 dbSNP
rs973215211 585 dbSNP
rs765853805 587 dbSNP
rs765082629 588 dbSNP
rs963319651 594 dbSNP
rs555399584 602 dbSNP
rs1402011420 603 dbSNP
rs1033611501 606 dbSNP
rs1424934419 607 dbSNP
rs1315534786 608 dbSNP
rs1043564088 611 dbSNP
rs946135630 619 dbSNP
rs537047171 621 dbSNP
rs1402816255 622 dbSNP
rs1302252566 624 dbSNP
rs1353209699 625 dbSNP
rs1468013892 627 dbSNP
rs545586925 628 dbSNP
rs569714696 633 dbSNP
rs35036680 642 dbSNP
rs747839291 648 dbSNP
rs1478241744 671 dbSNP
rs553456953 680 dbSNP
rs1009691151 688 dbSNP
rs1191033845 691 dbSNP
rs532887289 697 dbSNP
rs921890134 697 dbSNP
rs12085657 699 dbSNP
rs892531192 705 dbSNP
rs1032499557 706 dbSNP
rs1471452641 709 dbSNP
rs1425708030 715 dbSNP
rs1038918401 721 dbSNP
rs1203640325 726 dbSNP
rs941727744 735 dbSNP
rs75960805 738 dbSNP
rs573969886 739 dbSNP
rs1388317127 741 dbSNP
rs1404620706 756 dbSNP
rs201404614 757 dbSNP
rs6700115 765 dbSNP
rs944252563 766 dbSNP
rs1329428276 777 dbSNP
rs1268115958 778 dbSNP
rs1246335215 781 dbSNP
rs1340603188 789 dbSNP
rs184850594 802 dbSNP
rs1317340673 804 dbSNP
rs890163871 805 dbSNP
rs992999203 815 dbSNP
rs1051866013 819 dbSNP
rs1450305104 827 dbSNP
rs59873054 834 dbSNP
rs1034635538 842 dbSNP
rs148141068 843 dbSNP
rs929094355 846 dbSNP
rs1001774524 853 dbSNP
rs918997570 854 dbSNP
rs369207440 856 dbSNP
rs1461325619 865 dbSNP
rs941863411 867 dbSNP
rs1021648359 871 dbSNP
rs182039656 871 dbSNP
rs1464914659 872 dbSNP
rs1421336302 877 dbSNP
rs1396039318 879 dbSNP
rs1330521127 880 dbSNP
rs980723211 881 dbSNP
rs1010627074 883 dbSNP
rs1336226687 890 dbSNP
rs891889478 893 dbSNP
rs1447526928 896 dbSNP
rs780186994 898 dbSNP
rs971046684 922 dbSNP
rs1459489156 930 dbSNP
rs189570738 933 dbSNP
rs1217343464 937 dbSNP
rs376023154 946 dbSNP
rs1324874931 948 dbSNP
rs1051792652 952 dbSNP
rs796726521 954 dbSNP
rs988531721 966 dbSNP
rs1243643892 989 dbSNP
rs868164985 992 dbSNP
rs544986152 999 dbSNP
rs532968369 1002 dbSNP
rs1470900266 1016 dbSNP
rs757246548 1018 dbSNP
rs1240575843 1019 dbSNP
rs1414135977 1023 dbSNP
rs1032406635 1024 dbSNP
rs909093959 1042 dbSNP
rs1047398484 1050 dbSNP
rs748645300 1059 dbSNP
rs1270420196 1065 dbSNP
rs900017901 1069 dbSNP
rs1236017143 1076 dbSNP
rs577546252 1083 dbSNP
rs1343595873 1090 dbSNP
rs1211303765 1094 dbSNP
rs1008519931 1095 dbSNP
rs917713988 1100 dbSNP
rs991901123 1105 dbSNP
rs1192725053 1119 dbSNP
rs1269287828 1122 dbSNP
rs115996120 1126 dbSNP
rs540876696 1138 dbSNP
rs1051469332 1140 dbSNP
rs1243151666 1141 dbSNP
rs1378937409 1143 dbSNP
rs1465665940 1145 dbSNP
rs927428438 1149 dbSNP
rs1362745439 1150 dbSNP
rs980244827 1158 dbSNP
rs928970162 1160 dbSNP
rs1309978847 1162 dbSNP
rs1298004060 1163 dbSNP
rs1366529211 1169 dbSNP
rs1389048156 1173 dbSNP
rs1299733121 1179 dbSNP
rs1331025789 1182 dbSNP
rs897473380 1187 dbSNP
rs1239205252 1191 dbSNP
rs969012906 1194 dbSNP
rs1022262885 1196 dbSNP
rs1215381457 1200 dbSNP
rs1037460178 1206 dbSNP
rs1207840450 1207 dbSNP
rs1445762184 1214 dbSNP
rs777803992 1217 dbSNP
rs1419579056 1218 dbSNP
rs1182674314 1229 dbSNP
rs1382205321 1234 dbSNP
rs926479359 1237 dbSNP
rs571417389 1239 dbSNP
rs1327064655 1242 dbSNP
rs1386251851 1250 dbSNP
rs1388703051 1252 dbSNP
rs980993453 1256 dbSNP
rs1030400908 1260 dbSNP
rs997537350 1267 dbSNP
rs376180866 1273 dbSNP
rs1392444495 1281 dbSNP
rs1162949237 1291 dbSNP
rs1422891471 1295 dbSNP
rs1238985240 1299 dbSNP
rs1315390309 1305 dbSNP
rs1323133393 1307 dbSNP
rs917837471 1309 dbSNP
rs988049606 1310 dbSNP
rs1006432777 1314 dbSNP
rs1200404850 1322 dbSNP
rs956707208 1323 dbSNP
rs925253205 1327 dbSNP
rs555268537 1328 dbSNP
rs551574331 1331 dbSNP
rs372235433 1332 dbSNP
rs534461604 1333 dbSNP
rs1462960590 1334 dbSNP
rs929022191 1347 dbSNP
rs1355306789 1349 dbSNP
rs1286628220 1350 dbSNP
rs1041010798 1355 dbSNP
rs1348495188 1356 dbSNP
rs1307497378 1357 dbSNP
rs1436950563 1358 dbSNP
rs1008799040 1363 dbSNP
rs955539088 1369 dbSNP
rs1380941526 1375 dbSNP
rs1331894016 1377 dbSNP
rs1220395107 1378 dbSNP
rs1256152432 1378 dbSNP
rs1307801860 1378 dbSNP
rs1311768506 1378 dbSNP
rs58886241 1378 dbSNP
rs71584142 1378 dbSNP
rs76230343 1378 dbSNP
rs878869014 1378 dbSNP
rs75480949 1379 dbSNP
rs1196284943 1380 dbSNP
rs1302835855 1380 dbSNP
rs1465534817 1381 dbSNP
rs548657142 1382 dbSNP
rs1360341808 1386 dbSNP
rs1362581331 1391 dbSNP
rs1056250945 1415 dbSNP
rs1362219715 1420 dbSNP
rs1026336545 1423 dbSNP
rs1276040958 1426 dbSNP
rs937764104 1431 dbSNP
rs1223994910 1439 dbSNP
rs994384347 1442 dbSNP
rs1400582089 1444 dbSNP
rs867788280 1452 dbSNP
rs1279441866 1474 dbSNP
rs926333219 1475 dbSNP
rs1208108928 1485 dbSNP
rs1037366206 1493 dbSNP
rs1488728410 1504 dbSNP
rs1219303462 1508 dbSNP
rs947505165 1521 dbSNP
rs1477794095 1525 dbSNP
rs1192223363 1542 dbSNP
rs184195925 1547 dbSNP
rs914870825 1548 dbSNP
rs942999833 1549 dbSNP
rs911459856 1553 dbSNP
rs989452075 1555 dbSNP
rs1263227661 1565 dbSNP
rs956095946 1576 dbSNP
rs1360822993 1581 dbSNP
rs1005996941 1585 dbSNP
rs1030303119 1592 dbSNP
rs1214486047 1597 dbSNP
rs192942533 1603 dbSNP
rs1276616590 1612 dbSNP
rs1044789553 1615 dbSNP
rs1280658170 1620 dbSNP
rs949258417 1624 dbSNP
rs1322608039 1625 dbSNP
rs1282847394 1627 dbSNP
rs1219011308 1641 dbSNP
rs1284342363 1649 dbSNP
rs1221871477 1654 dbSNP
rs1222762394 1669 dbSNP
rs1017610331 1673 dbSNP
rs1006087426 1676 dbSNP
rs1190166243 1683 dbSNP
rs1380329221 1689 dbSNP
rs887604526 1695 dbSNP
rs917718762 1697 dbSNP
rs1379303423 1700 dbSNP
rs1405800952 1706 dbSNP
rs1325259203 1743 dbSNP
rs1348095639 1747 dbSNP
rs1052312271 1768 dbSNP
rs896373925 1769 dbSNP
rs569750010 1771 dbSNP
rs1430107620 1782 dbSNP
rs1056158982 1787 dbSNP
rs937620096 1789 dbSNP
rs904948322 1790 dbSNP
rs1043855693 1803 dbSNP
rs935239630 1805 dbSNP
rs1229298458 1806 dbSNP
rs925325304 1810 dbSNP
rs947606317 1811 dbSNP
rs988967713 1820 dbSNP
rs979383449 1821 dbSNP
rs964126447 1827 dbSNP
rs1336787085 1829 dbSNP
rs923486654 1836 dbSNP
rs1176224919 1850 dbSNP
rs911309361 1854 dbSNP
rs368396933 1862 dbSNP
rs557812401 1864 dbSNP
rs779219112 1867 dbSNP
rs986881402 1868 dbSNP
rs955733739 1872 dbSNP
rs1164814513 1875 dbSNP
rs1411300244 1887 dbSNP
rs539410481 1889 dbSNP
rs994457665 1897 dbSNP
rs1402362816 1902 dbSNP
rs1405866487 1912 dbSNP
rs964675492 1919 dbSNP
rs1478572342 1923 dbSNP
rs1017682517 1930 dbSNP
rs1448975960 1932 dbSNP
rs1423918468 1937 dbSNP
rs1354614010 1950 dbSNP
rs1228107684 1954 dbSNP
rs1185366020 1972 dbSNP
rs962956070 1975 dbSNP
rs1259336652 1981 dbSNP
rs1474172986 1992 dbSNP
rs1196255831 1997 dbSNP
rs571864729 1998 dbSNP
rs1442664042 2008 dbSNP
rs1239105506 2009 dbSNP
rs547233449 2011 dbSNP
rs1210774770 2014 dbSNP
rs528684210 2020 dbSNP
rs567897881 2021 dbSNP
rs904831105 2024 dbSNP
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rs755387277 2034 dbSNP
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rs1395798082 2048 dbSNP
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rs1045216528 2052 dbSNP
rs1013302378 2054 dbSNP
rs896343303 2059 dbSNP
rs1052216023 2061 dbSNP
rs935272988 2062 dbSNP
rs754296207 2067 dbSNP
rs1214051086 2068 dbSNP
rs1456677973 2068 dbSNP
rs896404887 2085 dbSNP
rs1217286915 2087 dbSNP
rs1034899577 2088 dbSNP
rs771697814 2089 dbSNP
rs1217118560 2102 dbSNP
rs1276137421 2102 dbSNP
rs760035749 2108 dbSNP
rs1265005971 2110 dbSNP
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rs1001901930 2117 dbSNP
rs1192776533 2117 dbSNP
rs1453951901 2121 dbSNP
rs549156846 2123 dbSNP
rs1382731979 2127 dbSNP
rs911187559 2130 dbSNP
rs1400390788 2132 dbSNP
rs987300371 2145 dbSNP
rs1434302199 2146 dbSNP
rs934084315 2147 dbSNP
rs1362782660 2153 dbSNP
rs1398703261 2159 dbSNP
rs772435983 2162 dbSNP
rs187816167 2170 dbSNP
rs1272540085 2180 dbSNP
rs1346740065 2180 dbSNP
rs1354751302 2189 dbSNP
rs1169365103 2193 dbSNP
rs1287906257 2198 dbSNP
rs1487146470 2199 dbSNP
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rs1268033415 2214 dbSNP
rs115254400 2220 dbSNP
rs1011087432 2221 dbSNP
rs1375951876 2235 dbSNP
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rs754472981 2250 dbSNP
rs1159408770 2251 dbSNP
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rs1443868667 2265 dbSNP
rs962841201 2269 dbSNP
rs1288630680 2280 dbSNP
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rs1392130440 2293 dbSNP
rs1017213371 2296 dbSNP
rs980308818 2302 dbSNP
rs1388990818 2305 dbSNP
rs1321031975 2310 dbSNP
rs1053700504 2311 dbSNP
rs545024695 2311 dbSNP
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rs1265774432 2316 dbSNP
rs145768511 2317 dbSNP
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rs1251224354 2332 dbSNP
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rs779423296 2349 dbSNP
rs1438026680 2350 dbSNP
rs1252089558 2351 dbSNP
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rs1306015256 2368 dbSNP
rs903673200 2378 dbSNP
rs1459907806 2386 dbSNP
rs1161902393 2395 dbSNP
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rs1292060972 2405 dbSNP
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rs1374241872 2419 dbSNP
rs1390418625 2420 dbSNP
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rs1257198490 2624 dbSNP
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rs999018634 2634 dbSNP
rs207460442 2639 dbSNP
rs902001999 2640 dbSNP
rs1040633052 2642 dbSNP
rs545621721 2644 dbSNP
rs1248680391 2645 dbSNP
rs1360576809 2646 dbSNP
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rs1360865486 2661 dbSNP
rs777907781 2663 dbSNP
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rs999192872 2665 dbSNP
rs930625789 2679 dbSNP
rs919368001 2680 dbSNP
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rs867047233 3858 dbSNP
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rs1456817582 3878 dbSNP
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rs1023380938 3955 dbSNP
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rs537249120 3984 dbSNP
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rs1444861406 4022 dbSNP
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rs1361683470 4032 dbSNP
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rs998994099 4064 dbSNP
rs903318839 4066 dbSNP
rs1202211873 4072 dbSNP
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rs1485962037 4097 dbSNP
rs1190069148 4100 dbSNP
rs551549959 4104 dbSNP
rs768877440 4111 dbSNP
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rs1284954597 4119 dbSNP
rs1411814726 4122 dbSNP
rs1049415652 4127 dbSNP
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rs1043294445 4137 dbSNP
rs1415776981 4144 dbSNP
rs182401227 4144 dbSNP
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rs893510271 4150 dbSNP
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rs1271849613 4175 dbSNP
rs932446401 4177 dbSNP
rs962233986 4182 dbSNP
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rs1485279257 4213 dbSNP
rs908054659 4216 dbSNP
rs1225541106 4217 dbSNP
rs780462032 4220 dbSNP
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rs191440835 4342 dbSNP
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rs185664684 4576 dbSNP
rs7520750 4577 dbSNP
rs553933613 4578 dbSNP
rs868332976 4579 dbSNP
rs1235192917 4587 dbSNP
rs150168736 4603 dbSNP
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rs1253023293 4630 dbSNP
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rs1258810128 4636 dbSNP
rs1475929415 4637 dbSNP
rs978037655 4637 dbSNP
rs758122361 4647 dbSNP
rs1462134761 4649 dbSNP
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rs1474345612 4674 dbSNP
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rs1394153370 4677 dbSNP
rs1408978684 4683 dbSNP
rs1313462285 4690 dbSNP
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rs1183954644 4708 dbSNP
rs1321369566 4710 dbSNP
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rs1208230562 4726 dbSNP
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rs1273730471 4746 dbSNP
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rs1370966165 4751 dbSNP
rs995844235 4752 dbSNP
rs748814248 4753 dbSNP
rs928630280 4758 dbSNP
rs1377226844 4765 dbSNP
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rs1301168283 4776 dbSNP
rs1317851913 4782 dbSNP
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rs1301493748 4804 dbSNP
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rs1228167626 4814 dbSNP
rs1281433215 4821 dbSNP
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rs1029661967 4835 dbSNP
rs1407767520 4841 dbSNP
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rs997744649 4854 dbSNP
rs900874084 4856 dbSNP
rs1045505708 4858 dbSNP
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rs1194045878 4862 dbSNP
rs1396594383 4869 dbSNP
rs770554041 4878 dbSNP
rs570738692 4880 dbSNP
rs949601906 4881 dbSNP
rs1454407118 4886 dbSNP
rs1290666438 4892 dbSNP
rs1178741818 4894 dbSNP
rs1386755304 4896 dbSNP
rs1434571941 4899 dbSNP
rs1162799876 4911 dbSNP
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rs1003990198 4928 dbSNP
rs1233732893 4931 dbSNP
rs886846458 4932 dbSNP
rs1301237009 4934 dbSNP
rs766306463 4939 dbSNP
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rs1217344242 4955 dbSNP
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rs990974132 4959 dbSNP
rs1214001440 4960 dbSNP
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rs1048116860 4975 dbSNP
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rs925506247 4983 dbSNP
rs4451582 4984 dbSNP
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rs1310960144 4990 dbSNP
rs1409764706 4992 dbSNP
rs1326889859 4994 dbSNP
rs966681760 5008 dbSNP
rs1225896598 5013 dbSNP
rs1373584454 5019 dbSNP
rs1434803161 5022 dbSNP
rs1293255834 5023 dbSNP
rs1374715833 5029 dbSNP
rs1056148797 5049 dbSNP
rs1287002796 5053 dbSNP
rs1327929891 5057 dbSNP
rs1233336844 5059 dbSNP
rs1274702678 5071 dbSNP
rs938606933 5076 dbSNP
rs1319507618 5079 dbSNP
rs1220583351 5083 dbSNP
rs1297298870 5084 dbSNP
rs1233184548 5090 dbSNP
rs1407416522 5091 dbSNP
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rs1366849118 5097 dbSNP
rs1303253687 5098 dbSNP
rs954126043 5099 dbSNP
rs1416261343 5103 dbSNP
rs1028594272 5104 dbSNP
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rs12758172 5110 dbSNP
rs12742965 5111 dbSNP
rs1412054641 5113 dbSNP
rs1348052889 5116 dbSNP
rs1306776295 5117 dbSNP
rs995312349 5119 dbSNP
rs1414904711 5122 dbSNP
rs1294543309 5123 dbSNP
rs1161016715 5124 dbSNP
rs1419514836 5131 dbSNP
rs1408957886 5136 dbSNP
rs1227318804 5144 dbSNP
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rs1332767465 5147 dbSNP
rs1471753317 5149 dbSNP
rs1006108623 5150 dbSNP
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rs950572313 5154 dbSNP
rs1273864924 5156 dbSNP
rs1490311611 5157 dbSNP
rs1026086682 5158 dbSNP
rs1299461482 5163 dbSNP
rs1218355493 5165 dbSNP
rs962955217 5168 dbSNP
rs1239211134 5170 dbSNP
rs1317938416 5185 dbSNP
rs1471846490 5207 dbSNP
rs1306771763 5215 dbSNP
rs774400566 5217 dbSNP
rs977378652 5224 dbSNP
rs1347020279 5231 dbSNP
rs1181553339 5233 dbSNP
rs140856708 5236 dbSNP
rs1003920068 5241 dbSNP
rs878937112 5248 dbSNP
rs749491734 5269 dbSNP
rs1370512308 5278 dbSNP
rs1435824590 5279 dbSNP
rs990210465 5282 dbSNP
rs953679742 5295 dbSNP
rs1454094794 5306 dbSNP
rs1029154903 5313 dbSNP
rs1045533463 5320 dbSNP
rs1270451061 5322 dbSNP
rs1156717202 5323 dbSNP
rs1225928211 5326 dbSNP
rs1296522751 5344 dbSNP
rs1455791689 5348 dbSNP
rs1013090685 5349 dbSNP
rs1213014636 5349 dbSNP
rs45571335 5377 dbSNP
rs1200212416 5384 dbSNP
rs1440822642 5385 dbSNP
rs1209473831 5393 dbSNP
rs774014780 5394 dbSNP
rs894199686 5394 dbSNP
rs1187085789 5398 dbSNP
rs1389869341 5400 dbSNP
rs1265843809 5412 dbSNP
rs998216456 5412 dbSNP
rs1174887998 5415 dbSNP
rs1400652959 5416 dbSNP
rs1413442842 5421 dbSNP
rs1318350680 5423 dbSNP
rs936848889 5439 dbSNP
rs1432353170 5445 dbSNP
rs966266242 5448 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 57459.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aauuuggagaUGAUUCAAGGGu 5'
                    :|| ||||||| 
Target 5' ------ucagGCUCAGUUCCCc 3'
 		1 - 16
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 57459.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000368655.4 | 3UTR | UCAGGCUCAGUUCCCCUAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000368655.4 | 3UTR | UCAGGCUCAGUUCCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000368655.4 | 3UTR | UCAGGCUCAGUUCCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
51 hsa-miR-4471 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT082398 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 4
MIRT295740 KIF3B kinesin family member 3B 2 2
MIRT453005 CCDC115 coiled-coil domain containing 115 2 16
MIRT456180 ZDHHC6 zinc finger DHHC-type containing 6 2 2
MIRT457455 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT464992 TUBB2A tubulin beta 2A class IIa 2 10
MIRT467615 SLC7A5 solute carrier family 7 member 5 2 2
MIRT468602 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT470070 PTGES2 prostaglandin E synthase 2 2 2
MIRT470562 POU2F1 POU class 2 homeobox 1 2 2
MIRT472274 NFIB nuclear factor I B 2 2
MIRT473471 MCFD2 multiple coagulation factor deficiency 2 2 2
MIRT477892 DVL3 dishevelled segment polarity protein 3 2 4
MIRT486345 TACC2 transforming acidic coiled-coil containing protein 2 2 6
MIRT487190 NFASC neurofascin 2 4
MIRT488690 NAT9 N-acetyltransferase 9 (putative) 2 2
MIRT492106 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT495216 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT495666 TUBAL3 tubulin alpha like 3 2 2
MIRT501833 NCOA2 nuclear receptor coactivator 2 2 2
MIRT507147 GATAD2B GATA zinc finger domain containing 2B 2 4
MIRT508522 GDI1 GDP dissociation inhibitor 1 2 2
MIRT513839 KCTD15 potassium channel tetramerization domain containing 15 2 4
MIRT513883 GTF2IRD2 GTF2I repeat domain containing 2 2 4
MIRT527336 COL18A1 collagen type XVIII alpha 1 chain 2 2
MIRT537390 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT538879 BTBD1 BTB domain containing 1 2 2
MIRT539044 ATXN1L ataxin 1 like 2 4
MIRT554387 SERTAD3 SERTA domain containing 3 2 2
MIRT554936 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT567517 FOXC1 forkhead box C1 2 2
MIRT573598 CERS1 ceramide synthase 1 2 2
MIRT642417 CILP2 cartilage intermediate layer protein 2 2 2
MIRT643296 PHKG1 phosphorylase kinase catalytic subunit gamma 1 2 2
MIRT652883 SYVN1 synoviolin 1 2 2
MIRT657928 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT660302 BHLHE40 basic helix-loop-helix family member e40 2 2
MIRT664717 SLC7A6OS solute carrier family 7 member 6 opposite strand 2 2
MIRT698889 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT702007 MIDN midnolin 2 2
MIRT706808 APOL4 apolipoprotein L4 2 2
MIRT708330 DERL2 derlin 2 2 2
MIRT709885 ERCC6L ERCC excision repair 6 like, spindle assembly checkpoint helicase 2 2
MIRT711887 INSIG2 insulin induced gene 2 2 2
MIRT711956 CYP27B1 cytochrome P450 family 27 subfamily B member 1 2 2
MIRT715081 PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 2 2
MIRT716218 TRIM17 tripartite motif containing 17 2 2
MIRT718124 CHST4 carbohydrate sulfotransferase 4 2 2
MIRT718725 VWA9 integrator complex subunit 14 2 2
MIRT719450 APBA1 amyloid beta precursor protein binding family A member 1 2 2
MIRT725666 ABI2 abl interactor 2 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4471 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4471 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-4471 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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