miRTarBase - #MIRT507984


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pre-miRNA Information
pre-miRNA hsa-mir-190b   
Genomic Coordinates chr1: 154193665 - 154193743
Description Homo sapiens miR-190b stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-190b
Sequence 11| UGAUAUGUUUGAUAUUGGGUU |31
Evidence Not_experimental
Experiments
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol BCL2L13   
Synonyms BCL-RAMBO, Bcl2-L-13, MIL1
Description BCL2 like 13
Transcript NM_015367   
Expression
Putative miRNA Targets on BCL2L13
3'UTR of BCL2L13
(miRNA target sites are highlighted)		 
>BCL2L13|NM_015367|3'UTR
   1 GAGGCTTTTCAGAAGAGAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
  81 GGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGA
 161 GGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATCTTAGGGGTAAAGCA
 241 CCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCTGTGTGTG
 321 GTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAAATGT
 401 CCCGTGTGAACATCCCCTATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAGAAATTCCC
 481 AGCTGAGAGAACTTAGCTGTGGGCTCCTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
 561 GAGCAGGCTCTGCACCCACTCTTTTTTTGCCCCCCGCCCTCATCCTGGAGTGTGAGGGTGCTCGCCCGTACTCTCAGCTG
 641 CCTCTCAGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAG
 721 TCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGA
 801 GAAAATCACATGAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAGACACATGTGTC
 881 TTGTGTCAAGGCAGGAGGATAACCTGGATGACCTTCTGAGGTCTCTTCAGCCCTTTTCGCTAGTGGTCACCCACCACCAT
 961 GGTTACTTGCCAGCAACATCTCTATTGCTGGATGGTCCCTGTCTATAACCTTGGGCTAGTATATTTTTTCCAATATGGGA
1041 CCTTAGTCTTACTACTGATGAGTTCTATGGGTCTCTTGCTAGGGGGTAAGGATTTTTATTCTTGGGCTTATAGAGCCAGT
1121 TAGATCATAATTCTTATGAAATAGAGAGTGTCCTAAATATCACTGAAATAAAAAGTAGGAAAAAGAAGCTTGAATTTTAA
1201 GACTGAGGCTGCTCTGCAGATTCTAGTTTGGCTTTCAGAGTTCAAGAGTGGTGGCATCTTCACCTGAATTCTTCAATGCC
1281 AGGGTAATAAACCAAAATAGTCCTAATCAGTATATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTCTGGCTGATCCCA
1361 GCCCTAAAGGAAGGGTAGACCCGTGTCTTTCCAGCCCTAAAGGAAGGGTAGACCCGTGTCTTTCCAGCCCTAAAGGAAGG
1441 GCAGACCCGTGTCTTTCCATGCCCGAGGGCCACGACGTCACTATGCAGGGCACACGTGGCTTGGTTTAAAAAGGTCATCT
1521 TAGATTTATCTTAGTAAATGTAATAAATTATTTTTTAGATCTTGAAATTTATAATAAAAATACTTTACCTACCCTGATCA
1601 CCAAAACCTGATGTTTTAAATGTGCTTTCTTTTTGAAATTTATGTTTTCAAATAAAATCTCCCTAAAGCAATATTTAAAA
1681 ATTGGTCAAAACAAGGTCTGGGAGTATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTA
1761 GTGTCCCATTTAGGGAGTGATGTTTTAAGGGTTTTTGTGTACTTGGATTAAGTAATTAGAGGTGAGTGGGGGGAATGGGA
1841 TTATTGAGGCAATGATTTTTTTCTTCATGGGCTCTGATAGTTGCATTGATTGTTCTGTATTCTAATTGCTATATTTGTGT
1921 TTGCATAGGTGAAGAGCAAACTGGTGCGTTATCTTGATTTTTAAAAAGTAATAAATCCTATGAGTTCCAGTATTAACACT
2001 TGCCAGTTCTGGATCCTCACACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA
2081 AAGGAGGTGTGAGGCTTAGGAAATTGGAGCCTGTGTTGCCCACGAAAGGAAAGAATAAGGAAGAAATGTGGTATGGAAGC
2161 GGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGTAATGGAA
2241 CTAGATAGTGTTTTCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTGTT
2321 CTTCCTTCACGTCCTCACCCTCTGCCTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCCT
2401 GCTTTTTGCTCATACATTTAAAAAACTATTTCTCAAGCTTCCCCTCCTTTTGGGGGGAGGAGCTGATAGTAGGAGGCCAT
2481 TCCTTCCACCTCCAACTTATACCCTCTAAGTCTAAGGTGAAGGAAAGATTCAGAATAAATCCAACTTGTTTATAGAAAAG
2561 TTCTTGTTAGTCCTTAGACCTCATCTCAACTGCTCTGTTGAAGGTAATGATTTATTGGGGGGAAAAAACAACGCCAATTT
2641 ATCCTCTCTGTATTAAAGTGATAATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGCCTTAAGGGGACTCTCAT
2721 GATCATCATTCCCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGA
2801 GGCATTCTTGATACCCCTTCTCACCTGCATTTCTGTCCCAGGGATACCAGATGCAGCCACTACCTAACTAGGCTTGTCCT
2881 GGGGGAGTGAGCCGTGAACCTGGAGACATGGCTTTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTGCGCTGATTCCC
2961 TCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGATGTGGACATTTCAGTGTTTGAA
3041 TTATTTTAAGAGATGTTTTATAGAAATAAAACGTTTTGTAGCTAAGAATTTTCCCTTTCTCTTAATTTCTTACATCTTTC
3121 CACACAAACTTATCTTTCCAAGAATTTGAGGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAAC
3201 AGACACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGCATTATCTCGTTTAACATCTCAGCGACATACTGGATACCAG
3281 AATAATGTTTCCTCTTCTCTGGTGCACCAAAACCTGCCCTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuGGGUUAUAGUUUGUAUAGu 5'
            ::| | | ||||| |||| 
Target 5' ctTTCCACA-CAAACTTATCt 3'
 3116 - 3135 126.00 -8.30
2 
miRNA  3' uugggUUAUAGUUUGUAUAGu 5'
               |:|:||  | ||||| 
Target 5' tagagAGTGTCCTAAATATCa 3'
 1142 - 1162 124.00 -8.60
3 
miRNA  3' uuggGUUAUAG-----UUUGUAUAGu 5'
              || ||||      ||||| || 
Target 5' caagCATTATCTCGTTTAACATCTCa 3'
 3236 - 3261 121.00 -7.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM5598048 1 COSMIC
COSN30149121 22 COSMIC
COSN31510744 26 COSMIC
COSN31495750 100 COSMIC
COSN8565803 328 COSMIC
COSN20117127 504 COSMIC
COSN20117128 721 COSMIC
COSN22694181 778 COSMIC
COSN25897393 960 COSMIC
COSN20178055 1147 COSMIC
COSN23080854 1484 COSMIC
COSN26657558 1619 COSMIC
COSN1894743 1728 COSMIC
COSN21552859 2568 COSMIC
COSN8013579 2633 COSMIC
COSN32170439 3007 COSMIC
COSN32170440 3018 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1220744427 6 dbSNP
rs762257198 11 dbSNP
rs747772511 12 dbSNP
rs1322499948 13 dbSNP
rs1208996012 16 dbSNP
rs1272358549 19 dbSNP
rs749639944 20 dbSNP
rs1486504286 21 dbSNP
rs372216701 24 dbSNP
rs768886016 24 dbSNP
rs1294091370 27 dbSNP
rs1205059069 32 dbSNP
rs963988799 33 dbSNP
rs750518347 37 dbSNP
rs1425653865 40 dbSNP
rs1184215341 50 dbSNP
rs927695290 58 dbSNP
rs542667052 60 dbSNP
rs1253035748 67 dbSNP
rs559277522 70 dbSNP
rs1439948362 78 dbSNP
rs1399790218 86 dbSNP
rs1024060074 94 dbSNP
rs189176031 97 dbSNP
rs1029335047 103 dbSNP
rs1183470489 109 dbSNP
rs725768 110 dbSNP
rs1472178361 121 dbSNP
rs987861206 128 dbSNP
rs1163735041 132 dbSNP
rs1275530511 133 dbSNP
rs1196700933 135 dbSNP
rs193246987 140 dbSNP
rs1273027103 146 dbSNP
rs185751541 155 dbSNP
rs531042876 156 dbSNP
rs1025740315 161 dbSNP
rs1307377207 166 dbSNP
rs148288468 173 dbSNP
rs1338384252 174 dbSNP
rs1370888400 188 dbSNP
rs984104402 201 dbSNP
rs1392933241 202 dbSNP
rs567876848 206 dbSNP
rs942920912 207 dbSNP
rs1163065952 210 dbSNP
rs1471865181 211 dbSNP
rs977007568 230 dbSNP
rs530376185 232 dbSNP
rs917274646 233 dbSNP
rs950019763 237 dbSNP
rs1448828953 244 dbSNP
rs922720398 245 dbSNP
rs1340615690 247 dbSNP
rs1360841440 251 dbSNP
rs28583299 255 dbSNP
rs753191593 256 dbSNP
rs1227196714 257 dbSNP
rs725769 261 dbSNP
rs777801095 262 dbSNP
rs1341833874 266 dbSNP
rs150473534 275 dbSNP
rs1253631977 283 dbSNP
rs935775221 287 dbSNP
rs1306000347 290 dbSNP
rs1406676366 306 dbSNP
rs1441540140 307 dbSNP
rs753224352 308 dbSNP
rs1162891411 309 dbSNP
rs1055381589 310 dbSNP
rs894153595 317 dbSNP
rs725770 319 dbSNP
rs190170102 323 dbSNP
rs571342087 328 dbSNP
rs1447157231 338 dbSNP
rs757312660 340 dbSNP
rs897627327 343 dbSNP
rs1202106037 344 dbSNP
rs967762071 351 dbSNP
rs993333553 351 dbSNP
rs1220006614 353 dbSNP
rs1449312975 354 dbSNP
rs1027926723 359 dbSNP
rs979116398 362 dbSNP
rs926145679 373 dbSNP
rs1328117383 374 dbSNP
rs952771439 380 dbSNP
rs1373578704 383 dbSNP
rs959103221 385 dbSNP
rs991785200 390 dbSNP
rs1170653951 397 dbSNP
rs984237278 403 dbSNP
rs536868344 404 dbSNP
rs2587100 405 dbSNP
rs976976347 406 dbSNP
rs922891354 413 dbSNP
rs1363057338 415 dbSNP
rs1434478872 417 dbSNP
rs1429038676 418 dbSNP
rs908510624 419 dbSNP
rs1298894454 420 dbSNP
rs1243327206 426 dbSNP
rs572251171 433 dbSNP
rs1265780731 437 dbSNP
rs1205191232 440 dbSNP
rs1300413438 441 dbSNP
rs1231504406 443 dbSNP
rs977599008 445 dbSNP
rs1217376465 461 dbSNP
rs1364050009 462 dbSNP
rs1270718287 471 dbSNP
rs926150157 473 dbSNP
rs941430793 494 dbSNP
rs35123241 501 dbSNP
rs398040441 501 dbSNP
rs1203856569 514 dbSNP
rs5992807 523 dbSNP
rs779000706 524 dbSNP
rs74932682 529 dbSNP
rs552840798 536 dbSNP
rs543863204 537 dbSNP
rs1045839638 538 dbSNP
rs897725163 542 dbSNP
rs993862789 547 dbSNP
rs1412023808 555 dbSNP
rs1420799322 556 dbSNP
rs1448291819 558 dbSNP
rs779949618 558 dbSNP
rs1009220227 559 dbSNP
rs1185046393 561 dbSNP
rs1461521606 564 dbSNP
rs200010280 566 dbSNP
rs887615644 568 dbSNP
rs1178778275 569 dbSNP
rs1000638358 571 dbSNP
rs1227588747 571 dbSNP
rs1456766377 572 dbSNP
rs746978009 574 dbSNP
rs1005599145 576 dbSNP
rs1363095643 578 dbSNP
rs545942439 582 dbSNP
rs1018387286 589 dbSNP
rs201121115 590 dbSNP
rs1444737385 591 dbSNP
rs199664501 591 dbSNP
rs572936973 592 dbSNP
rs1168498156 593 dbSNP
rs998184386 595 dbSNP
rs115606729 596 dbSNP
rs200714925 596 dbSNP
rs3838141 597 dbSNP
rs867043015 597 dbSNP
rs1254996639 599 dbSNP
rs397841331 600 dbSNP
rs565063120 602 dbSNP
rs1187024396 606 dbSNP
rs1179758702 613 dbSNP
rs908563814 617 dbSNP
rs1284802942 619 dbSNP
rs549695219 622 dbSNP
rs575656853 624 dbSNP
rs1207528341 625 dbSNP
rs544486477 626 dbSNP
rs926085455 628 dbSNP
rs957552995 629 dbSNP
rs1225746846 632 dbSNP
rs1051361563 636 dbSNP
rs1486578908 643 dbSNP
rs1307852394 645 dbSNP
rs561484482 647 dbSNP
rs530227789 654 dbSNP
rs1207933701 656 dbSNP
rs991170304 659 dbSNP
rs1367949798 663 dbSNP
rs915650854 666 dbSNP
rs1457908667 667 dbSNP
rs1367393552 677 dbSNP
rs138345476 678 dbSNP
rs560751842 679 dbSNP
rs1412393352 685 dbSNP
rs528120165 692 dbSNP
rs918953233 693 dbSNP
rs1481970470 696 dbSNP
rs780809421 697 dbSNP
rs567224458 700 dbSNP
rs566131175 701 dbSNP
rs1317799201 709 dbSNP
rs1287987200 710 dbSNP
rs61374862 721 dbSNP
rs67482881 721 dbSNP
rs202228518 722 dbSNP
rs59741596 722 dbSNP
rs1284421317 724 dbSNP
rs1386762040 725 dbSNP
rs184045043 733 dbSNP
rs894880919 735 dbSNP
rs188680767 736 dbSNP
rs1388870273 739 dbSNP
rs528715930 753 dbSNP
rs1471456392 762 dbSNP
rs1431241513 766 dbSNP
rs899899144 771 dbSNP
rs1432564836 772 dbSNP
rs772827626 785 dbSNP
rs537104748 786 dbSNP
rs550402035 792 dbSNP
rs1207070673 802 dbSNP
rs1326082257 803 dbSNP
rs143968710 804 dbSNP
rs974475954 808 dbSNP
rs1233116859 819 dbSNP
rs536045895 822 dbSNP
rs1348205215 823 dbSNP
rs1222808600 825 dbSNP
rs999094160 826 dbSNP
rs1319460058 827 dbSNP
rs1318136673 834 dbSNP
rs552880066 839 dbSNP
rs1172995227 840 dbSNP
rs879353491 843 dbSNP
rs957649458 850 dbSNP
rs1195244917 852 dbSNP
rs138001207 854 dbSNP
rs538661024 859 dbSNP
rs755446241 874 dbSNP
rs1186901706 875 dbSNP
rs772456252 877 dbSNP
rs1462853467 878 dbSNP
rs1482620175 879 dbSNP
rs1177941403 881 dbSNP
rs181379 886 dbSNP
rs1253540592 887 dbSNP
rs1422128794 891 dbSNP
rs971164740 893 dbSNP
rs575651545 898 dbSNP
rs1386382369 904 dbSNP
rs1384482394 905 dbSNP
rs9967 906 dbSNP
rs925200789 907 dbSNP
rs1370283413 910 dbSNP
rs1169566104 913 dbSNP
rs918888543 918 dbSNP
rs1443399400 919 dbSNP
rs1298326485 922 dbSNP
rs928979911 923 dbSNP
rs1389595229 924 dbSNP
rs753101603 931 dbSNP
rs199828692 939 dbSNP
rs539013233 940 dbSNP
rs1238203366 943 dbSNP
rs1187127380 951 dbSNP
rs909116154 957 dbSNP
rs561216185 958 dbSNP
rs1253195596 959 dbSNP
rs180698180 963 dbSNP
rs540808049 972 dbSNP
rs1206459008 981 dbSNP
rs1359577741 983 dbSNP
rs560788726 985 dbSNP
rs1038883258 989 dbSNP
rs143476820 993 dbSNP
rs185272170 996 dbSNP
rs894772273 998 dbSNP
rs1051634919 1006 dbSNP
rs761050041 1010 dbSNP
rs866493716 1018 dbSNP
rs1330684019 1019 dbSNP
rs1410330200 1020 dbSNP
rs764496361 1021 dbSNP
rs1205043119 1024 dbSNP
rs1426568404 1024 dbSNP
rs1414699998 1026 dbSNP
rs71328233 1030 dbSNP
rs143951596 1034 dbSNP
rs1482428584 1036 dbSNP
rs1365890693 1039 dbSNP
rs1046152584 1040 dbSNP
rs1181320917 1042 dbSNP
rs1243779368 1043 dbSNP
rs1446543467 1046 dbSNP
rs1187159083 1047 dbSNP
rs190033234 1068 dbSNP
rs992913364 1075 dbSNP
rs1452821777 1076 dbSNP
rs569567867 1079 dbSNP
rs1208835076 1080 dbSNP
rs1353874276 1080 dbSNP
rs1289855812 1084 dbSNP
rs765547451 1085 dbSNP
rs1173057592 1088 dbSNP
rs893389995 1101 dbSNP
rs1355893585 1107 dbSNP
rs1438614558 1109 dbSNP
rs1350514526 1110 dbSNP
rs1323032300 1112 dbSNP
rs1403697467 1119 dbSNP
rs1387365286 1136 dbSNP
rs567229917 1146 dbSNP
rs1160188295 1150 dbSNP
rs536067027 1156 dbSNP
rs1410284776 1158 dbSNP
rs1202221809 1159 dbSNP
rs1478665965 1164 dbSNP
rs963279595 1168 dbSNP
rs1464198963 1174 dbSNP
rs546357648 1187 dbSNP
rs1269551970 1190 dbSNP
rs1023056401 1204 dbSNP
rs971973533 1205 dbSNP
rs1328222916 1207 dbSNP
rs566437132 1208 dbSNP
rs538495948 1209 dbSNP
rs1368155093 1211 dbSNP
rs981189696 1216 dbSNP
rs558423407 1219 dbSNP
rs912633406 1220 dbSNP
rs569273880 1224 dbSNP
rs182293443 1226 dbSNP
rs1386868765 1227 dbSNP
rs1454124538 1230 dbSNP
rs1179090468 1239 dbSNP
rs187357555 1245 dbSNP
rs925084072 1247 dbSNP
rs950522712 1251 dbSNP
rs780004508 1255 dbSNP
rs984438315 1257 dbSNP
rs1171338328 1260 dbSNP
rs936589175 1267 dbSNP
rs908916759 1269 dbSNP
rs1328038843 1270 dbSNP
rs574809120 1277 dbSNP
rs1188774640 1280 dbSNP
rs116438098 1281 dbSNP
rs949069916 1286 dbSNP
rs1211925526 1288 dbSNP
rs1312563897 1295 dbSNP
rs1277759753 1297 dbSNP
rs535382344 1303 dbSNP
rs933163052 1307 dbSNP
rs1042252621 1309 dbSNP
rs903249740 1321 dbSNP
rs755006560 1327 dbSNP
rs1054379854 1328 dbSNP
rs893148175 1330 dbSNP
rs1013081867 1331 dbSNP
rs898622879 1338 dbSNP
rs780958068 1342 dbSNP
rs1188835737 1345 dbSNP
rs148605173 1354 dbSNP
rs1324156862 1358 dbSNP
rs1448383469 1359 dbSNP
rs1387865384 1360 dbSNP
rs35743584 1362 dbSNP
rs747740271 1363 dbSNP
rs1483448076 1365 dbSNP
rs577512138 1379 dbSNP
rs1008164357 1382 dbSNP
rs546560661 1383 dbSNP
rs1484023451 1384 dbSNP
rs1406449165 1390 dbSNP
rs1275286135 1396 dbSNP
rs1470662704 1398 dbSNP
rs1340140641 1407 dbSNP
rs1315035466 1410 dbSNP
rs1229173508 1415 dbSNP
rs984572113 1416 dbSNP
rs1301512647 1417 dbSNP
rs1318014265 1428 dbSNP
rs1371670856 1443 dbSNP
rs1344503300 1446 dbSNP
rs966775229 1449 dbSNP
rs191695770 1450 dbSNP
rs964393735 1456 dbSNP
rs1352324259 1457 dbSNP
rs1166464307 1460 dbSNP
rs1365151968 1465 dbSNP
rs16981061 1466 dbSNP
rs1185469231 1468 dbSNP
rs1284154168 1469 dbSNP
rs923168141 1471 dbSNP
rs1473466210 1474 dbSNP
rs933276472 1475 dbSNP
rs1204362412 1477 dbSNP
rs543837687 1477 dbSNP
rs1267347716 1478 dbSNP
rs561056225 1484 dbSNP
rs949074304 1487 dbSNP
rs777223397 1496 dbSNP
rs978329228 1497 dbSNP
rs1218494276 1502 dbSNP
rs369523864 1511 dbSNP
rs923834123 1515 dbSNP
rs1351503168 1518 dbSNP
rs1288256808 1526 dbSNP
rs981763856 1530 dbSNP
rs1393651023 1542 dbSNP
rs1294824467 1544 dbSNP
rs1245493747 1547 dbSNP
rs183531862 1549 dbSNP
rs1348894405 1554 dbSNP
rs200499311 1568 dbSNP
rs1200674812 1572 dbSNP
rs940422439 1576 dbSNP
rs1181327212 1580 dbSNP
rs770828395 1581 dbSNP
rs1037430631 1584 dbSNP
rs781594549 1586 dbSNP
rs1429530765 1588 dbSNP
rs1488200816 1593 dbSNP
rs1481237610 1595 dbSNP
rs1263845558 1609 dbSNP
rs1054473779 1612 dbSNP
rs898671662 1629 dbSNP
rs893113726 1630 dbSNP
rs931485515 1646 dbSNP
rs546390262 1658 dbSNP
rs1406543854 1668 dbSNP
rs1302625572 1672 dbSNP
rs1044429631 1674 dbSNP
rs1386778039 1674 dbSNP
rs5746469 1684 dbSNP
rs1008401296 1695 dbSNP
rs1389076492 1696 dbSNP
rs1158085868 1698 dbSNP
rs770042294 1699 dbSNP
rs1348118548 1701 dbSNP
rs186841571 1702 dbSNP
rs190149124 1703 dbSNP
rs1404090330 1707 dbSNP
rs1379233156 1708 dbSNP
rs1003165123 1728 dbSNP
rs182684554 1733 dbSNP
rs1251292949 1735 dbSNP
rs1190722328 1736 dbSNP
rs1465551805 1737 dbSNP
rs1247666952 1740 dbSNP
rs1048354056 1741 dbSNP
rs902499524 1745 dbSNP
rs886616067 1748 dbSNP
rs1311096359 1752 dbSNP
rs13056618 1762 dbSNP
rs1005934273 1781 dbSNP
rs186648964 1783 dbSNP
rs1279204341 1786 dbSNP
rs958135893 1793 dbSNP
rs1351413124 1798 dbSNP
rs150794418 1799 dbSNP
rs1024005796 1814 dbSNP
rs1404158093 1816 dbSNP
rs1016035132 1823 dbSNP
rs1288333658 1828 dbSNP
rs964486011 1829 dbSNP
rs995825014 1831 dbSNP
rs1170510327 1836 dbSNP
rs1030039266 1840 dbSNP
rs565610951 1848 dbSNP
rs370522762 1849 dbSNP
rs1450199164 1852 dbSNP
rs1015436898 1855 dbSNP
rs954781663 1857 dbSNP
rs557849489 1869 dbSNP
rs1271448450 1872 dbSNP
rs981984802 1875 dbSNP
rs978043874 1881 dbSNP
rs1257380509 1886 dbSNP
rs1200352363 1890 dbSNP
rs923732044 1893 dbSNP
rs957882776 1898 dbSNP
rs770513115 1899 dbSNP
rs45573832 1912 dbSNP
rs1296405269 1914 dbSNP
rs568571264 1926 dbSNP
rs1342012783 1927 dbSNP
rs1049933998 1928 dbSNP
rs1044789166 1930 dbSNP
rs1373505277 1941 dbSNP
rs1423979817 1945 dbSNP
rs944312612 1948 dbSNP
rs534337392 1949 dbSNP
rs775890910 1953 dbSNP
rs1047978193 1962 dbSNP
rs999466095 1970 dbSNP
rs886578825 1972 dbSNP
rs1032882043 1977 dbSNP
rs1006382807 1981 dbSNP
rs1254522668 1982 dbSNP
rs1206579315 1990 dbSNP
rs760944543 1991 dbSNP
rs1023468277 1996 dbSNP
rs769247820 1997 dbSNP
rs900250739 1999 dbSNP
rs970526876 2003 dbSNP
rs111323042 2006 dbSNP
rs995962507 2010 dbSNP
rs1410429304 2017 dbSNP
rs1030379059 2023 dbSNP
rs773399487 2026 dbSNP
rs1326985440 2028 dbSNP
rs1358856746 2035 dbSNP
rs139440908 2036 dbSNP
rs577549014 2037 dbSNP
rs1014837151 2051 dbSNP
rs999828249 2053 dbSNP
rs1414742768 2058 dbSNP
rs1030929209 2062 dbSNP
rs1271831210 2074 dbSNP
rs1183497996 2075 dbSNP
rs1472580959 2077 dbSNP
rs957975453 2078 dbSNP
rs989253469 2080 dbSNP
rs367700100 2082 dbSNP
rs1452835827 2095 dbSNP
rs546399038 2106 dbSNP
rs192448129 2114 dbSNP
rs970107264 2123 dbSNP
rs776984638 2124 dbSNP
rs747907142 2125 dbSNP
rs938714216 2136 dbSNP
rs1349822157 2140 dbSNP
rs1277709700 2141 dbSNP
rs1438633005 2143 dbSNP
rs920219969 2152 dbSNP
rs185539441 2161 dbSNP
rs375740219 2162 dbSNP
rs1387090080 2167 dbSNP
rs774419478 2178 dbSNP
rs544207748 2190 dbSNP
rs942299525 2191 dbSNP
rs1460269367 2197 dbSNP
rs144096061 2205 dbSNP
rs1478715009 2215 dbSNP
rs1246851397 2230 dbSNP
rs181380 2231 dbSNP
rs713671 2232 dbSNP
rs1249529941 2236 dbSNP
rs1411829731 2242 dbSNP
rs1332468206 2245 dbSNP
rs1316135460 2246 dbSNP
rs1382050493 2246 dbSNP
rs931685876 2249 dbSNP
rs1317773180 2251 dbSNP
rs1220945331 2255 dbSNP
rs1345775307 2258 dbSNP
rs559798577 2259 dbSNP
rs893761893 2266 dbSNP
rs890087415 2272 dbSNP
rs868611142 2303 dbSNP
rs1012352848 2308 dbSNP
rs1252295325 2315 dbSNP
rs999185584 2316 dbSNP
rs1045529495 2321 dbSNP
rs749199256 2322 dbSNP
rs1197125047 2330 dbSNP
rs1425229847 2331 dbSNP
rs578156991 2332 dbSNP
rs1479032341 2342 dbSNP
rs1452039186 2345 dbSNP
rs1188873963 2347 dbSNP
rs1485419371 2349 dbSNP
rs1010811754 2353 dbSNP
rs866121024 2356 dbSNP
rs1212129784 2358 dbSNP
rs1203821324 2364 dbSNP
rs1023390466 2369 dbSNP
rs1003360184 2371 dbSNP
rs1014889427 2374 dbSNP
rs969195403 2375 dbSNP
rs1191932255 2381 dbSNP
rs961947728 2390 dbSNP
rs980569775 2391 dbSNP
rs1035767097 2400 dbSNP
rs766700758 2417 dbSNP
rs543791100 2421 dbSNP
rs1449240735 2430 dbSNP
rs1244871022 2452 dbSNP
rs532203164 2453 dbSNP
rs754704205 2454 dbSNP
rs563666404 2455 dbSNP
rs973656795 2461 dbSNP
rs922072961 2462 dbSNP
rs35674182 2477 dbSNP
rs201442896 2479 dbSNP
rs932184959 2483 dbSNP
rs773801426 2487 dbSNP
rs867697710 2489 dbSNP
rs935602223 2492 dbSNP
rs58356326 2496 dbSNP
rs890191941 2501 dbSNP
rs915260276 2503 dbSNP
rs1470336717 2504 dbSNP
rs1229178969 2505 dbSNP
rs935112698 2505 dbSNP
rs1355290531 2507 dbSNP
rs1338834592 2508 dbSNP
rs1052041587 2515 dbSNP
rs948037632 2520 dbSNP
rs1351779755 2524 dbSNP
rs569148327 2528 dbSNP
rs531460183 2532 dbSNP
rs1298207908 2542 dbSNP
rs1461074101 2545 dbSNP
rs893480263 2547 dbSNP
rs1352341984 2549 dbSNP
rs1045198068 2550 dbSNP
rs146498769 2552 dbSNP
rs141019365 2556 dbSNP
rs36025934 2556 dbSNP
rs1185666772 2557 dbSNP
rs560021381 2559 dbSNP
rs1252477902 2561 dbSNP
rs771761822 2564 dbSNP
rs1003361159 2590 dbSNP
rs1479700428 2591 dbSNP
rs534170301 2595 dbSNP
rs188857903 2596 dbSNP
rs1035306100 2597 dbSNP
rs897638054 2598 dbSNP
rs142950091 2612 dbSNP
rs1027970849 2616 dbSNP
rs1230651307 2617 dbSNP
rs193013233 2618 dbSNP
rs1322460577 2619 dbSNP
rs1223559030 2623 dbSNP
rs395379 2624 dbSNP
rs1484620554 2625 dbSNP
rs1014896084 2626 dbSNP
rs1294917441 2626 dbSNP
rs1441225149 2628 dbSNP
rs556443252 2633 dbSNP
rs1162467211 2634 dbSNP
rs1458646664 2640 dbSNP
rs367882084 2647 dbSNP
rs963393847 2651 dbSNP
rs973625647 2653 dbSNP
rs1262348233 2657 dbSNP
rs922163450 2659 dbSNP
rs1427404079 2660 dbSNP
rs965773376 2662 dbSNP
rs1197084329 2667 dbSNP
rs1428832175 2668 dbSNP
rs777278555 2671 dbSNP
rs1260633896 2682 dbSNP
rs1480906975 2682 dbSNP
rs1237609091 2686 dbSNP
rs1178886880 2697 dbSNP
rs977104030 2698 dbSNP
rs932247902 2700 dbSNP
rs149790954 2701 dbSNP
rs1031150632 2703 dbSNP
rs1453155056 2713 dbSNP
rs987653549 2719 dbSNP
rs1289966075 2720 dbSNP
rs1387852136 2723 dbSNP
rs551967193 2749 dbSNP
rs61289176 2752 dbSNP
rs8919 2758 dbSNP
rs1379323981 2774 dbSNP
rs948119924 2774 dbSNP
rs778507632 2776 dbSNP
rs574127567 2788 dbSNP
rs1052136929 2789 dbSNP
rs1393444696 2791 dbSNP
rs1190819708 2795 dbSNP
rs1429473707 2796 dbSNP
rs539818828 2799 dbSNP
rs1302976766 2800 dbSNP
rs1314541885 2803 dbSNP
rs1036418725 2805 dbSNP
rs946398245 2808 dbSNP
rs1210892722 2814 dbSNP
rs1237784149 2816 dbSNP
rs1044734013 2818 dbSNP
rs1230213275 2823 dbSNP
rs905106132 2836 dbSNP
rs1294525529 2840 dbSNP
rs1380349752 2843 dbSNP
rs1404185252 2848 dbSNP
rs559837025 2854 dbSNP
rs1003906306 2855 dbSNP
rs897685892 2863 dbSNP
rs930453748 2864 dbSNP
rs1373776584 2872 dbSNP
rs1170680448 2877 dbSNP
rs1462729315 2879 dbSNP
rs1056266455 2882 dbSNP
rs576495603 2884 dbSNP
rs1191432401 2889 dbSNP
rs145769173 2894 dbSNP
rs1004948717 2895 dbSNP
rs1485041466 2897 dbSNP
rs1018565542 2900 dbSNP
rs768927285 2920 dbSNP
rs1339614635 2927 dbSNP
rs1250421885 2928 dbSNP
rs901496485 2938 dbSNP
rs998576903 2940 dbSNP
rs1201786086 2941 dbSNP
rs1248770031 2942 dbSNP
rs1293829281 2943 dbSNP
rs1414130653 2951 dbSNP
rs562587703 2952 dbSNP
rs1309875103 2959 dbSNP
rs1395956933 2963 dbSNP
rs1166381895 2970 dbSNP
rs963486785 2972 dbSNP
rs1418566879 2976 dbSNP
rs956919367 2985 dbSNP
rs1159992051 2986 dbSNP
rs1397965270 2990 dbSNP
rs1366031291 2996 dbSNP
rs994818613 3002 dbSNP
rs1029444604 3004 dbSNP
rs953645039 3012 dbSNP
rs1022581274 3020 dbSNP
rs1437920284 3036 dbSNP
rs988134928 3037 dbSNP
rs1163531736 3048 dbSNP
rs1366521819 3049 dbSNP
rs1297378415 3052 dbSNP
rs970052697 3055 dbSNP
rs184564294 3064 dbSNP
rs1407153934 3068 dbSNP
rs927964456 3069 dbSNP
rs957110259 3073 dbSNP
rs1294917537 3074 dbSNP
rs1332534217 3078 dbSNP
rs1370799805 3080 dbSNP
rs1390289164 3084 dbSNP
rs764454062 3086 dbSNP
rs777018304 3087 dbSNP
rs199940573 3096 dbSNP
rs1335308576 3100 dbSNP
rs775497512 3113 dbSNP
rs1388796833 3114 dbSNP
rs748610664 3115 dbSNP
rs1395522465 3118 dbSNP
rs1325604401 3126 dbSNP
rs972165180 3133 dbSNP
rs919331196 3134 dbSNP
rs930526105 3142 dbSNP
rs1470198199 3147 dbSNP
rs1362756317 3153 dbSNP
rs987821296 3161 dbSNP
rs1049373518 3169 dbSNP
rs1212764632 3173 dbSNP
rs1466978431 3174 dbSNP
rs1286244696 3175 dbSNP
rs1224336855 3186 dbSNP
rs558644760 3187 dbSNP
rs914978562 3188 dbSNP
rs770371325 3192 dbSNP
rs1044704463 3195 dbSNP
rs1371917825 3200 dbSNP
rs1325495979 3205 dbSNP
rs189225878 3207 dbSNP
rs1035153744 3208 dbSNP
rs939244436 3216 dbSNP
rs1249819019 3221 dbSNP
rs1400684241 3226 dbSNP
rs1056805344 3230 dbSNP
rs1480454965 3240 dbSNP
rs886920563 3242 dbSNP
rs1383460796 3247 dbSNP
rs1052914364 3249 dbSNP
rs892870767 3250 dbSNP
rs1004037877 3259 dbSNP
rs115835786 3264 dbSNP
rs1002484597 3270 dbSNP
rs1216264832 3275 dbSNP
rs899243005 3285 dbSNP
rs1035252064 3287 dbSNP
rs994955029 3300 dbSNP
rs1348766964 3301 dbSNP
rs1302948774 3322 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuggguuauaguuUGUAUAGu 5'
                       ||||||| 
Target 5' --------cuuccACAUAUCa 3'
 		1 - 13
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 23786.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuggguuauaguuUGUAUAGu 5'
                       ||||||| 
Target 5' --------cuuccACAUAUCa 3'
 		1 - 13
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000355028.3 | 3UTR | cuuccacauaucacugccaccucc
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000355028.3 | 3UTR | cuuccacauaucacugccaccucccug
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.853 1.2e-7 0.440 1.8e-2 23 Click to see details
GSE38226 Liver fibrosis 0.411 3.2e-2 -0.201 1.9e-1 21 Click to see details
GSE28260 Renal cortex and medulla -0.319 1.4e-1 -0.423 7.5e-2 13 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.44 1.6e-1 0.500 1.3e-1 7 Click to see details
GSE19536 Breast cancer -0.094 1.8e-1 -0.143 7.8e-2 100 Click to see details
GSE19350 CNS germ cell tumors -0.293 1.8e-1 0.096 3.8e-1 12 Click to see details
GSE19783 ER- ER- breast cancer -0.103 1.8e-1 -0.102 1.9e-1 79 Click to see details
GSE26953 Aortic valvular endothelial cells 0.183 2.0e-1 0.217 1.5e-1 24 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.167 2.1e-1 -0.099 3.2e-1 25 Click to see details
GSE17498 Multiple myeloma 0.129 2.1e-1 0.189 1.2e-1 40 Click to see details
GSE28544 Breast cancer 0.131 2.7e-1 0.151 2.4e-1 24 Click to see details
GSE32688 Pancreatic cancer -0.104 2.9e-1 0.039 4.2e-1 32 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.104 3.1e-1 0.141 2.5e-1 25 Click to see details
GSE19783 ER+ ER+ breast cancer -0.098 3.4e-1 -0.032 4.5e-1 20 Click to see details
GSE21687 Ependynoma primary tumors -0.011 4.7e-1 -0.068 3.0e-1 64 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.016 4.7e-1 -0.409 3.7e-2 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.367 0.04 0.424 0.02 23 Click to see details
BRCA -0.199 0.05 -0.149 0.11 72 Click to see details
STAD 0.783 0.06 0.700 0.09 5 Click to see details
ESCA 0.87 0.07 0.800 0.1 4 Click to see details
LUSC -0.248 0.15 -0.244 0.16 19 Click to see details
KIRC 0.295 0.16 0.341 0.13 13 Click to see details
KIRP -0.434 0.17 -0.143 0.38 7 Click to see details
THCA 0.127 0.28 0.112 0.3 24 Click to see details
LIHC -0.147 0.28 -0.189 0.23 18 Click to see details
UCEC 0.163 0.28 0.114 0.34 15 Click to see details
PRAD 0.124 0.29 0.104 0.32 23 Click to see details
CHOL -0.227 0.39 0.000 0.5 4 Click to see details
LUAD -0.015 0.49 0.167 0.35 8 Click to see details
KICH -0.009 0.49 0.100 0.44 5 Click to see details
KICH -0.009 0.49 0.100 0.44 5 Click to see details
KICH -0.009 0.49 0.100 0.44 5 Click to see details
KICH -0.009 0.49 0.100 0.44 5 Click to see details
KICH -0.009 0.49 0.100 0.44 5 Click to see details
KICH -0.009 0.49 0.100 0.44 5 Click to see details
60 hsa-miR-190b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT054581 IGF1 insulin like growth factor 1 4 1
MIRT066966 ATXN7L3B ataxin 7 like 3B 2 2
MIRT192449 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT250414 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT306294 KLHL24 kelch like family member 24 2 2
MIRT355845 SGMS2 sphingomyelin synthase 2 2 4
MIRT437770 MTMR6 myotubularin related protein 6 1 1
MIRT437771 MTMR6 myotubularin related protein 6 1 1
MIRT437772 Mtmr6 myotubularin related protein 6 1 1
MIRT444672 CDKL2 cyclin dependent kinase like 2 2 2
MIRT446389 PCDHB11 protocadherin beta 11 2 2
MIRT446634 SDC3 syndecan 3 2 2
MIRT449410 TRIM5 tripartite motif containing 5 2 2
MIRT449560 GPC5 glypican 5 2 2
MIRT469928 PTPRJ protein tyrosine phosphatase, receptor type J 2 6
MIRT473736 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT474210 LDHA lactate dehydrogenase A 2 2
MIRT474583 KLF6 Kruppel like factor 6 2 2
MIRT476732 FOXN2 forkhead box N2 2 2
MIRT478455 DAB2 DAB2, clathrin adaptor protein 2 2
MIRT495327 ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 2 4
MIRT498615 MTRNR2L10 MT-RNR2-like 10 2 12
MIRT501734 OVOL1 ovo like transcriptional repressor 1 2 2
MIRT501849 MTRNR2L8 MT-RNR2-like 8 2 14
MIRT504678 CYGB cytoglobin 2 4
MIRT506517 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 6
MIRT507984 BCL2L13 BCL2 like 13 2 4
MIRT508444 ZNF608 zinc finger protein 608 2 4
MIRT511366 IL6ST interleukin 6 signal transducer 2 4
MIRT520515 TRA2B transformer 2 beta homolog 2 2
MIRT524571 CALML4 calmodulin like 4 2 4
MIRT531896 INVS inversin 2 4
MIRT533916 TATDN2 TatD DNase domain containing 2 2 2
MIRT537503 FAM13B family with sequence similarity 13 member B 2 2
MIRT541689 CCDC160 coiled-coil domain containing 160 2 8
MIRT544419 ZNF460 zinc finger protein 460 2 4
MIRT544615 CSDE1 cold shock domain containing E1 2 2
MIRT545076 IL7R interleukin 7 receptor 2 2
MIRT545849 ZNF264 zinc finger protein 264 2 4
MIRT547436 MED4 mediator complex subunit 4 2 2
MIRT550157 ZNF223 zinc finger protein 223 2 4
MIRT553948 STAMBP STAM binding protein 2 2
MIRT554395 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT555667 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT564193 PM20D2 peptidase M20 domain containing 2 2 2
MIRT566792 MKL2 MKL1/myocardin like 2 2 2
MIRT566843 LRRC58 leucine rich repeat containing 58 2 2
MIRT572516 KIAA0232 KIAA0232 2 2
MIRT607428 NOTCH2NL notch 2 N-terminal like 2 10
MIRT627779 RAB30 RAB30, member RAS oncogene family 2 2
MIRT635159 ENO4 enolase family member 4 2 2
MIRT642159 ADCYAP1R1 ADCYAP receptor type I 3 2
MIRT646205 DUSP10 dual specificity phosphatase 10 2 2
MIRT657007 KCNMB4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 2 2
MIRT665817 TMEM161B transmembrane protein 161B 2 2
MIRT667488 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT707098 ZNF850 zinc finger protein 850 2 2
MIRT708719 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT735521 HUS1 HUS1 checkpoint clamp component 3 0
MIRT736644 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 2 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-1 Anthocyanin NULL 145858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Caffeic acid NULL 689043 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Ferulic acid NULL 445858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Hesperidin NULL 10621 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-1 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Quantitative real-time PCR myocardial differentiation of mouse ES cells 19521018 2009 down-regulated
miR-1 Sulfonyl-hydrazone-1 (SHZ) NULL NULL Quantitative real-time PCR Murine broblast-derived Induced pluripotent stem cells 21445862 2011 up-regulated
miR-1 Cocaine NULL 446220 Next-generation sequencing ventral striatum 21708909 2011 up-regulated
miR-1 Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 down-regualted
miR-1 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-1 Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 Palmitic acid approved 985 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-1 Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-1 Hydrogen peroxide (H2O2) NULL 784 Quantitative real-time PCR Human umbilical vein endothelial cells 21527937 2011 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-1 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-1 Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR cardia 22889704 2012 up-regulated
miR-1 Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-1 Quinidine approved 441074 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 up-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 down-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR post-infarction rat cardiomyocytes 21220930 2011 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-1 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 up-regulated
miR-190b Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-190b Atorvastatin approved 60823 Microarray PC3 prostate cancer cells 23936432 2013 up-regualted
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-190b Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

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