Gene Symbol |
CD84
|
Synonyms |
LY9B, SLAMF5, hCD84, mCD84 |
Description |
CD84 molecule |
Transcript |
NM_001184881
|
Other Transcripts |
NM_001184879
,
NM_001184882
,
NM_003874
|
Expression |
|
Putative miRNA Targets on CD84 |
|
3'UTR of CD84 (miRNA target sites are highlighted) |
>CD84|NM_001184881|3'UTR
1 TAAGATGGGGAAAGCCAGCACACAGGACAGTAAACCTCCTGGGACTTCAAGCTATGAAATTGTGATCTAGGCTGCTGGGC
81 TGAATTCTCCCTCTGGAAACTGAGTTACAACCACCAATACTGGCAGGTTCCCTGGATCCAGATCTTCTCTGCCCAACTCT
161 TACTGGGAGATTGCAAACTGCCACATCTCAGCCTGTAAGCAAAGCAGGAAACCTTCTGCTGGGCATAGCTTGTGCCTAAA
241 TGGACAAATGGATGCATACCCTTCCTGAAATGACTCCCTTCTGAATGAATGACAAAGCAGGTTACCTAGTATAGTTTTCC
321 CAAACTTCTTCCCATCATAGCACATGTAGAAAATAATATTTTTATGGCACACTGGGATAAACAAGCAAGATTGCTCACTT
401 CTGGAAGCTGCATATGACTAGAGGCCTCTTGTGACTGGAGGTAACAACCCTGCCCAGTAACTGTGGGAGAAGGGGATCAA
481 TATTTTGCACACCTGTAATAGGCCATGGCACACCAGCCAAGATGCTCTGCTCACAGTCAGTATGTGTGAAGATCCCTGGT
561 GCGTGGCCTTCACCACGCATCTTGAGCAAATTAGGAAAATGTACCCTTCGCTTGAGGCAGATGCAGCCCTTCCCCCGAGT
641 GCATGGCTTGGAGAGCAGAATGTGGGCTGCATATAAGCACACTCATCCCTTTGTCTGGGAATCTTTGTGCAGGGCATAAC
721 AGGCTTAGTAAGTCCAAACACAGATGACAGTGCTGTGTGGGTCTCTGTCAGAGTTGTGGCTCTCAGCCATGTAGACACAC
801 TCTCCAAATGGAGTGTTGGAAAATGTTCTTTCTGCAGGGTCTAGAGACTGCTGGGACACTTTTCTTGGAGTGCTACTTCA
881 GAAGCCTTATAGGATTTTCTTTCTGGCCAAGATTTCCTTCTGTATCACTCCAAGCAGCCTCAGCAGAAGAAGCAGCCATG
961 CCCAGTATTCCCACTCTCCAAAAGGAACTGACCAGCTTATATTTCTCACACTTCTGGGGAACTGGGTATAATCCAACCAT
1041 CAAAATAGAAGACCTTGCAAGAAGCAGAGTCATTCTCCAGAAGGAACTTGGGAGATGATGGTGCAGATGATGAAACTGGG
1121 TTCATCCCAGTTCCAAAGACTCAGAGAACTAGAGTTTAAGCTGAGGCAGAGTGCCGCCACCCTGGCATGCCCCACAAACA
1201 GATCACCAGCCAGCTTACACAGGCATTAACTCTCCTCAATGAGGAAGAATCATTCACAACTGAGCAAGACATTCATATGA
1281 TCATTTAAGGAAGTGTTTCCCTTATGTGTTAGCAAGTATAATCGGCTAACTCCTAAATCCCAATGAATAGTCCTAGGCTG
1361 GACAGCAATGGGCTGCAATTAGGCAGATAAAGACATCAGTCCCAGTAAATGAATCCATAGACTCATCTAGCACCAACTAC
1441 CATTAGCACTATGTTAGGAGCTGCAAGGCCCCAAAGTAGAAGATGTGCATAATGTCTGCTCTTGTGTAGCTCAGGAGACA
1521 ATTCCAGCACAGACACTACAGTTAACGCTGAACTGCAGCTGCAAGTAATAGCATGAACAGTCAGAAAAATACCTTATGAG
1601 GGGGCAGGGCTGAAGCTGGGCCTTGAAGGATGGATGAAATTTGGATAGAGAATGAGGAAGACAGAGGGCCTCCAAGTGAG
1681 AGAAGCATGAAAAATGAGCAGGGGCCTGGATCAGTGGGGTGTATTCAGAGCACCTCTCCAGATGCACCATGCATGCTCAC
1761 AGTCCCTTGCCTATGTGTGGCAGAGTGTCCCAGCCAGATGTGTGCCCTCACCCCATGTCCATTTACATGTCCTTCAATGC
1841 CCACCTCAAAAGGTACCTCTTCTGTAAAGCTTTCCCTGGTATCAGGAATCAAAATTAATCAGGGATCTTTTCACACTGCT
1921 GTTTTTTCCTCTTTGGTCCTTCTATCACTAAAACTCATCTCATTCAGCCTTACAGCATAACTAATTATTTGTTTTCCTCA
2001 CTACATTGTACATGTGGGAATTACAGATAAACGGAAGCCGGCTGGGGTGGTGGCTCACGCCTGTAATCCCAACACTTTGG
2081 GAGGCCAAGGCAGGCGGATCACCTGAGGTCAGGAGTTCGAGATTAGTCTGGCCAACATGGTGAAACCCCATCTCTACTAA
2161 AAATACGAAATTAGCCAGGTGTGGTGGCACACATCTGTAGTCCCAGCTACTCTGGAGGCTGAGACAGGAGAATCGCTTGA
2241 ACCCAGGAAGTGGAGGTTGCAGTGAGCTGAGATCACACCACTGCACTCCAGCCTGGGAGAGACAGAGTGAGACTCCATCT
2321 CGAAAAAAAAAAAAAGATAGAAGCCAATAAGCATGGTGCAATCAAATTCTGGCAAGCATTAAATATCAGGATGCAGCTGG
2401 GCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCACTTGAGGTCAGGAATTTGAGAGG
2481 ATCCTGGCCAGCATGGCAAAACCCCATCTGTACTTAAAATACAAAAAAATTAGCTGGGCGTGGTGGTGCACACCTGTAAT
2561 CCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATCCTGCCAC
2641 TGCACTCCAGGCTGGGCAACAGAGTGAGACCATGTCTCAAAAAATAAAAATAAAATAAAATAATATCAGGATGCATACAT
2721 CAGAGGCTGTTCCTAGTGTAAAGGCACTTTGGAGGGAGAAGACTTTCAGAGTTAGGCAGACCAACTAAGAGGTCAGCTGA
2801 AGCACCTAACCAGTTGTAAGGAGGTGAAAGACAGCACCCCAAGAAGAGACGTGCAGGAAGGAGGAAAGAGGCTTGGTCAT
2881 AAAGGATGGAGGAATTCCAAAGTGACACTGAACAGGCTGCGTTTATCCTAAAATAAAACCACTCCTCACTCTGTGGATGC
2961 GTTGAAGACTCATTCCCAAACATCTTTATTCTCTAACTTGCCCTCTTCCTCTTCCTAATATGCTCACTCAAGTAAAATTA
3041 CTAGTGTCCTAATGCCCCTATGCATATTGTCAAAAATAAAAATCAGAAGCAGGTTAGATCTGTTAGGTCTTCCAGAAGAG
3121 CAAACCTGGGATGAAGCCAGAGCCCAGGAATTCTGAAGGTAGCCTTTGGACTCAGGACACCCTACTCTTGTCTCTCCTCT
3201 CAGTTTCTCTGCTATGAATCTCCTGATTCATGAACACGTTATCTGTTCACCCTTCTCTCTAGGTCTTAGTTCTTAGATTT
3281 TCCTTCTGTAAAATGCATGTGATCTTATTTTCCCCTCCACAACTTTCCAGATGAACTAGACTGTGACCAAGAGGTCTATA
3361 AAATCAAAGCATCATGGAACAGGATCTTGTATCAGACCAAAGTGTGCCAGTTTTTAAAAATGTGCATCAAAATGGAAGTC
3441 TCAGAGACAGAGCCCTCTGGTGGAAAGTTCTAGTAGGTTAGGACAGTCCTGCCTGCAGACACCTTGGGCTTTACTGAGGG
3521 ACTCAACTGAGAAAATGAGGAATGTTGCAGCTCATGATTCTTAGAAGAAGAAAGTGAAGCTTGTTTAAAATATGATTTAA
3601 AAAATCTGTAGAACACTGTAAACTACACAGGCTATGAGGGAATAGCCTGGTTGGGCCAGCTTGGAAATCGGGCACAGGCA
3681 GGAAGGGGCCTGTCTGGTTTGGGCCGTGTCCACAGAGAGCACTTCTTAGGTCCTGCCTGGAGAGAAGGAATGGCTGGGCT
3761 ATATTTTCTTCCAGACTCATTATTTTTCTTCTGTTTGACTTTTCTCTGAATTTCCCTTGATTTGTATAAATTTTCTCAAT
3841 AATTAGTGACAGTGTCTACTGATTGTAAAATGAAGCTTGAAGGCCAGGCGCAGTGGCTCATGCCTGTAATCCTAGAATTT
3921 TGGGAGGCCAAGGTGGGTGGATCACAAGGAGTTCGAGACCAGCCTGGCCAAGGTTGTGAAACCGCGTCTCTACTAAAAAT
4001 ACAAAAAAATTAGCCGGGCATGGTGGCACGTGCCTGTAGTCCCAGCTACTCAGGAAGCTGAGGCAACAGAATCACTTGAA
4081 CCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTGGGCGAGAGAGTGAGACTCCGTCTCAA
4161 AAAAAAAAAAAAAAAAAAAAGTTTGAAGAACAAAGACAATAAGAGGAAATATAATGAGTGGTCATAAATGTGGGCTCTGA
4241 CAGTAGAGTGCCTGGGTCTGCATCCTGGTTTCTTAGTCATGTGACCTTAGGCAAGTTACTTTAACCTCGCTGTACCTCAG
4321 GTTGTCCATCTGTAAAATGGGGATAATAATAGTGCCTACCTTTTAAGGTTGATGTGGGGATTAAATGAGGTGTTGCTCAT
4401 ACAGGAATGTGCCTGTGCATGGCAAAGTTCGGGAAATTTTTTATAAGCTGTTCTAGGCCTGAAATCTTCAGAAGATGCTA
4481 ATCTAAATTCATGAAATAAGCTTCTTACAACAGAAATGCTGCTAGTATTATGCAAAATTAATGTTGTATATCAAACTTTT
4561 AACTCTCATCCCTCCTTATTCAGATATATTTTGTTATAAGCAATGTTTGTTCCCCTCGTTATTATACCACAGTCTACTTA
4641 CCTGATGCTATATCTGCCTCCCCAGTTAGACTGAGAGAACAGGGGATATACCTAAATAATAATAATAATAATAATAATAA
4721 TAAATAATAATGGAGAGCTCCTTGAAGATAGGGAGCCTGTAAGAATCATTGAGGGCTTATTTTGTATACCAACTGCTAAA
4801 CTAGATGCTTCATACATTGTTGTCAATACTCATGACAGCCTTGTAAAGTAGAAATTAATTCTTCCAGTTAACACTAAGGC
4881 TGACATATGAATACCTTGGCAAATCTGGAAAGCTGGGAAGACAGTATTTGAATTCAAGACTTCTTGTCACCAAGGGCCAT
4961 GCACTTGTACTCTGCCATGTGGCCCTTTTTTACCTCCTGTGGATTCTCCCTACCTGGTACTTGGCCTTAGGTGTACACAC
5041 ACCTGGCACTTTGCTTGACACATAATAGGTGGACCACAAATATCTACTAAATGAATATTTGCATATAGTAATATTTTAAG
5121 GTACTAAAAGCAGCTCAAAGTAAATATATTAATATATTAATTCCATTGCTATCTGGATAACCACTCAACTTTCCTGCTGA
5201 AAATGCCCATTTAATTAAAGAAGGTTGGATAGAGCTCTCTATATGCATTTTGGACAGGCAGGGGTTTCAGGTCATAAACA
5281 TTCTGATGAGTTAATATAAAATAAGAGAAACTGTAAATTTCCACTACTAAAAATCACAAAAATAACAGAAACAAAAGAAG
5361 AGATAAGAATTTGGGGAATTGTGCTGAACAATTTAGTGGTTAAAAAAAACAACTGTGCATGTTTAGACTTAAATAAGCCC
5441 CCATCCAAGTGTGAGGGGTCCAGTAATTTTTCAAAACATATGAAAGTGTTAATACATTTCGACAAAGGACCATTAAAAAA
5521 GTCCTGAATTCTGACTTGAGGGAGGAAAGTAATGACTAATACATTCTCTAGAGACTTGCAGACTTTGGGAATTCATAAAG
5601 GAATGGATGATAATTATTAACTGTTGCTGGCTGATTGCCCAGACAGTTCTCAACAGCCCTGTACAAGTCTCTGGGTTTGG
5681 GATGGATCAATTCTGAGACTGGAAAATGGCCAAATCTTTGCAAATGAGAAATATTTTTCTTATAAGTTCTTATTGTAGGC
5761 AAATAATTACATAGATTATTCATCAGAGAATTTTTAAATGCTCATAATCTCAACTCTTTCATTTACAACTTGTATTTCCA
5841 ATAGTTTATGGGTCATCTCTGCATAGATGTCAGAAGTCACCTCAAGTTTAGCGTGTCCAAAATCTAACTCACAGGTCTGT
5921 TTCTGACCTCCCAACTTGCTTTCCTTGTGTTTTTCCTATGCTAATGATCCACCATAATCAAAATAATTAACATTTATCCA
6001 GTGCCTACTATGTACTATTCCCTGTCCTGTTTTACATTTACTCATTTAAAGTCCATAAGAAACATTAAATCTCATCTGCC
6081 TTCTGAAGAAGATACAACCATGCTCTCTTTTACAAAGTAGGAAACTGGGTCACAGAAAGGTGAAGTCTTTAAGGCTGAAT
6161 CACAGTAGCTCATCCTAGTAAATAGAAAAGCCAGGATTCAACTCCAGGGGCTGGGTGCAGAACTGCTATTCTTCACTGCT
6241 TCACCAATCAGCAGCTACCCAAGGCAGAAAACTTTTTCATCCTTGGCTCCTTCATTCTCCCTGTCACCCCAGATCCCCTC
6321 TACATCTAGTCAGAGAATAGGTCCTGTCAATTCCAACTTCTCTATATGGCTCCTCTCAGGCATGTGCCCTTAATTGGCCT
6401 AATTCTCTAATACACCTTCCCTCTACATGCTCACTCCCTCAGATCATTGCTTTATCACGTGTTACCTGGGTTGCTATTAC
6481 ATAAAGAGCAATCTTTCTAAAATGAGGATCTTATCACTTCACTTCCACACTAAAATGTTTTTCCTGGGGAACCACACTCC
6561 TTAGCAATCTGACCCATCAGACCTTCCAGGCTGTCTCCTGCCTGCTCCCTAAGGCTCCAGCCACACAGAATTATCATGGG
6641 CCCACACACCCACCAAATCCTCCCATGCCTTTGCCCATGTTGTCTGGGATGCCCTTCTCTCCCTTCTGTCTACATCAAGC
6721 ATCAGACTGAATATCCCTCTTGTGCGGCCTTCTAAAACCTCCCGTCCAAAGCGAAATATATTGCCCTCTATTTATACTTT
6801 TACAGCATTTGGCACACAAGTACAGAGTAGTAGCTTTTTATCACATTCTCTGATAATTATATAGATATGGTATTTCTTAG
6881 CTCTCTCTCCAACTGGCTAATAAGTTGCTTTTTGTCTGAGTGCCTAATTTTGTGTTTTGTGTCTGAGTGCCTCAGTTCCT
6961 CAAAAAAAGGTTTTTTGATTAGTTCATTATTCATTTGAACATGGAAATTATGCTCACTAGTGGCAAATGCCACTAACCGT
7041 ATTCCAGAAGCTAGGTGTCATGTTTGCAATAAGATATATTATCCCTTCTACAAGTCACCTTTTATTTCAGGCATTTGTAA
7121 ATGCCCATTAATAAAGTATGGTTCATAAATTTTACCTTGTAAGTGCCTAAGAAATGAGACTACAAGCTCCATTTCAGCAG
7201 GACACAATAAATATTATTTTATAATGCATCTAAAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' agugUCAACG---GUCGACUCUAau 5'
:||||| |||||||||
Target 5' tggaGGTTGCAGTGAGCTGAGATca 3'
|
2251 - 2275
|
146.00 |
-17.90 |
2
|
miRNA 3' agugUCAACG---GUCGACUCUAau 5'
:||||| |||||||||
Target 5' tggaGGTTGCAGTGAGCTGAGATcc 3'
|
2610 - 2634
|
146.00 |
-17.90 |
3
|
miRNA 3' agUGUCAACGGUCGACUCUAAu 5'
|| || |::| ||||||
Target 5' caACTCTTACTGG--GAGATTg 3'
|
154 - 173
|
127.00 |
-7.90 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|