miRTarBase - #MIRT513003


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pre-miRNA Information
pre-miRNA hsa-mir-640   
Genomic Coordinates chr19: 19435063 - 19435158
Synonyms MIRN640, hsa-mir-640, MIR640
Description Homo sapiens miR-640 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-640
Sequence 61| AUGAUCCAGGAACCUGCCUCU |81
Evidence Experimental
Experiments RT-PCR
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30153378 1 COSMIC
COSN23015356 12 COSMIC
COSN30513185 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs111726405 1 dbSNP
rs765622881 2 dbSNP
rs1249744889 6 dbSNP
rs752995186 12 dbSNP
rs758746736 13 dbSNP
rs918887970 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MAN1A2   
Synonyms MAN1B
Description mannosidase alpha class 1A member 2
Transcript NM_006699   
Expression
Putative miRNA Targets on MAN1A2
3'UTR of MAN1A2
(miRNA target sites are highlighted)		 
>MAN1A2|NM_006699|3'UTR
   1 AAGCAGTTCCAGAAGGACCATTCTCACCTGTGTTTTGTTTACATGGACCACTACAGAAATTAGTTTGAAGGGGCGGCTTT
  81 TGAAAACCTGGACCTCTATGTCAACATGACAGGGTGAAACTATTCCCCCTAAGACTGTTCAACTTGTAGATACATCAACT
 161 TTGAAATTATTCCATTTTATACCTGACCAAAACATGTTCTGATATGTGTAGGACAGAGACCTGGATGTGCTTTGATCGTT
 241 AATGAGGTGGTCACATGAGAAATGATACCTGTTACTACTGTATTGTTTTTAGAGTCCTGAAGTCTGGAGGCTAGACTTCC
 321 TGAAAGCAAGTCAAGAATATAGAGCACCTTGCAGGAGTTCAAGATGGCCTTTGGAACCAATTATGTATTTGTTTCCTCCT
 401 ACAGTGGAGCAGCATTCAAATCAAATATTTACATATTGCTTATCACTTTTTCTCCATTTTAATAATGGAATGAACTAAAA
 481 TAAACAAGAACAAAAGAATAGTATAATTATATCAGTAACAAGAAGACTCAAAAAAGAAACAGGAGTACCTATCCCTATCT
 561 GAATTTTCAAGTTCCCCATTGGATGACCAGACTGGCAACCATTTCAAATCCCAGTCTATTTCATTGAAATTTCTTGGTTA
 641 AGTTTAATTTTCTCTGGGGGCATGATCTCACAAAGAATACTCAAGTCTTTTTCTTCTTATGGAATCATCGAAACTGCTAT
 721 TTATCATAATCACCACTTATGAGCCTGGGTTTGGGATTTTGTGCATGTAGTTCAGTCTAGTGTTGGTAGCATGACAGAAA
 801 GTGGGGAAAATGCCGCAGTTTGTTGCCTTGAAACCTAAGAGCAATCCTTGGTTTTGTTGCTACATTATTTTTCCAGACCA
 881 ACACATCTACCAAGTAAATTTTATTCACTTTAATTTCATAATAAAGTTAGTAGAGTCACTCAACTTACAACTTTATTTAT
 961 GTGGCTTGGCAAAAATCACTATAAGGCAGCTCTAAATTTGCCTTGATAAGCTAAATAAATTACTTTTATAACTTACTAAA
1041 GCAGAACAAACAGTGAAACTTTCTAAAATATTCTATCTGGAATAGGGACAGGGGATCTTTTATTTATAATCTCATCAGAT
1121 GAGTGAGTTGTTCACAGATATTTTATGTTTTTTTAATTTTCTCCAAGAATATTTATAGAATTCCAAAGAATCAGAATAGT
1201 TTCAAAATAATTTTCAGTGATAAAAGAGTGTTGTAATTAATCATATTACACTAAAATTGGGATACATCTAAGGAACTTTA
1281 TCTTACTATCAGTAGGTTTTGCATTGATATTTCTTTTTAAATAAACTACTAGTTCTTTATATTTTGACAAAAAGAACTTA
1361 AATTTTATCAGGAACTGTAAGATAAATATCTAGTGCTTATAAATTTTCTGTCCTTAAATTTATGTGACAGTGCAAGATAC
1441 TTTTGCTCTTTTCATTTAATATAGGCATCTTCCATTGACATTAATAAAACTTAGAAACAGTATAATTAGTATAACATTTA
1521 CTCTGAATTTGAAGATTTCCTGAAACAAAGTTTGTACAAGAAGCCCACCTTGGAATTCTGAAGGCTTATTTTCTTGTTTG
1601 ATAAGCTTTTCTTTTAAACTTAGGTTTTAAGTTGGGGAAAGACTTAATTAACTAATATAGTATTTTCTAAGGTTGATCAT
1681 CTTATACCACGAATCGTTAATTTTGACAGTTCTACTGATCCGTAAATGATAACCACTGCAAATTTTTTCAGTATAAAATT
1761 TTTCACTGCAAAAAAATTTCAGTAGAAAATAAGGATGCAGGGCCAGTTACAATAGTCCTTAAGAGAGTTAAATTATAGCA
1841 CATGTTTTGACATTGTAATATCTTTTACTACTTGAACATTTAAATTTCTAAATGAGAAAGGTATATATATTACTGTAACT
1921 GTAGAAGGGAAAAGGGAAAGTATTTGGTTCTAAAAAATGTTAGCCTTCCTCGTAAAAGTAGCACAAGCCCACTTATGAAT
2001 CACTGAGAAAAAGTGAAAAACTTGAGTTGGCAAAGATGCAGAGCAGCAGTGCAGATGGCAATGAACTCTCTGAATTCTCT
2081 TTTACCTTATTTAGAAGAATGCAGAGTAAAGGGACCTTCTTGGTTCTGCAGGAACTTCTCAAGGGATGAGGAGACAGAAC
2161 CCCTACTTCCAAGTGCTCTATTTGTATTACCCAGATGACTGAAGCTTAAGAGAAGGCAGGGAAGTATACAAGCAGAGCCA
2241 GTTCTGGTACAAACAAAGAATTTGACAGGGACAATGGAAGGGTCTTCTTCACCACTCCTTACCTTCTATGTGATGGAAAG
2321 ACTAGAGCTTATAAAAGTACTTCCATTTTTTTATTCTCCTGAATACCAAAGGCAATTAAAGTCAGCTACAAATGACTTGC
2401 CAGTGTCATGTTTTATTTTTGTTATAGATTTTTAAATTATTTCCTTCAAGATCAATTCTTATCCCATATAATGCTTAGCT
2481 TCCAAGAATATTCTTTACTTTCTTCTGTCTTTTACAGCTCTTTGCATTTTGTAGACCTTAATACTCAGGTTAAATATTCA
2561 TTGCATTTATAAGATCTTCTGCAAAAAGCCCAGAAATGGTCCTTTTCAGGTGCCTCTTCAAAGAGCTGACACCTTACCTT
2641 GTGCCTTTGGCACAAATGTGCAGAATAGATACATCAGTTGGTGCATAATCGAAAAAAATAGGAATTTTGAACACTGTTCT
2721 TCCTTCTACATTTATTTCTCT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucuccGUCCAAGG----ACCUAGUa 5'
               || |||||    ||||| | 
Target 5' attttCAAGTTCCCCATTGGATGAc 3'
 563 - 587 126.00 -10.10
2 
miRNA  3' ucUCC-GUCCAAGGACCUAgua 5'
            ||| |||   |||||||   
Target 5' gtAGGACAGAGACCTGGATgtg 3'
 208 - 229 123.00 -15.12
3 
miRNA  3' ucUCCGUCCAAGGACCUAGua 5'
            ||| |  |||:||| ||  
Target 5' aaAGGGACCTTCTTGGTTCtg 3'
 2108 - 2128 115.00 -11.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31505432 24 COSMIC
COSN26983568 27 COSMIC
COSN31598169 29 COSMIC
COSN31599425 57 COSMIC
COSN30149754 60 COSMIC
COSN1087770 93 COSMIC
COSN31581843 95 COSMIC
COSN5264759 123 COSMIC
COSN30143339 156 COSMIC
COSN31524657 212 COSMIC
COSN7173738 243 COSMIC
COSN6504483 263 COSMIC
COSN20063525 297 COSMIC
COSN30141340 298 COSMIC
COSN30134087 321 COSMIC
COSN23716421 537 COSMIC
COSN1403087 548 COSMIC
COSN22604899 813 COSMIC
COSN28722482 1090 COSMIC
COSN26183801 1155 COSMIC
COSN21027578 1266 COSMIC
COSN28740914 1295 COSMIC
COSN31523176 1302 COSMIC
COSN21773673 1329 COSMIC
COSN30543824 1334 COSMIC
COSN25627060 1613 COSMIC
COSN30730882 2013 COSMIC
COSN32063225 2025 COSMIC
COSN31568533 2078 COSMIC
COSN30103297 2114 COSMIC
COSM7213263 2176 COSMIC
COSM8685262 2182 COSMIC
COSN31556324 2219 COSMIC
COSN30531717 2266 COSMIC
COSN1403088 2384 COSMIC
COSN16006525 2570 COSMIC
COSN29170556 2699 COSMIC
COSN32062148 2797 COSMIC
COSN5731084 2970 COSMIC
COSN20676711 2971 COSMIC
COSN6504484 2980 COSMIC
COSN17057779 3001 COSMIC
COSN6504485 3121 COSMIC
COSN22827391 3741 COSMIC
COSN30344043 3923 COSMIC
COSN20156593 3926 COSMIC
COSN15175597 3928 COSMIC
COSN8888797 3956 COSMIC
COSN8888798 3958 COSMIC
COSN1087771 3999 COSMIC
COSN6504486 4118 COSMIC
COSN1403089 4612 COSMIC
COSN16857369 4774 COSMIC
COSN7173739 4958 COSMIC
COSN30229451 5013 COSMIC
COSN6000125 5187 COSMIC
COSN8318541 5507 COSMIC
COSN6504487 5612 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs951562204 15 dbSNP
rs974232816 19 dbSNP
rs773774818 22 dbSNP
rs747673446 28 dbSNP
rs767493744 29 dbSNP
rs1241640356 41 dbSNP
rs1474447083 44 dbSNP
rs982888190 47 dbSNP
rs1418277930 48 dbSNP
rs1458478257 49 dbSNP
rs538096637 56 dbSNP
rs1257077920 64 dbSNP
rs751901617 66 dbSNP
rs1196394663 68 dbSNP
rs1313525654 74 dbSNP
rs556322035 75 dbSNP
rs41312694 76 dbSNP
rs907531079 95 dbSNP
rs191050915 99 dbSNP
rs1311337551 100 dbSNP
rs1406041360 107 dbSNP
rs1447292361 113 dbSNP
rs1375913724 114 dbSNP
rs1416431280 117 dbSNP
rs182087068 123 dbSNP
rs749498403 126 dbSNP
rs1176968365 135 dbSNP
rs572307478 144 dbSNP
rs913626418 145 dbSNP
rs540522310 151 dbSNP
rs748238669 153 dbSNP
rs74372614 154 dbSNP
rs1177087655 159 dbSNP
rs1043604758 183 dbSNP
rs1484067384 188 dbSNP
rs903672728 189 dbSNP
rs529181823 195 dbSNP
rs1007509490 198 dbSNP
rs550831198 199 dbSNP
rs562652978 200 dbSNP
rs1351041020 209 dbSNP
rs1208873546 216 dbSNP
rs1039361721 222 dbSNP
rs1408987087 234 dbSNP
rs533083202 238 dbSNP
rs1369245294 239 dbSNP
rs1240820194 243 dbSNP
rs892995871 246 dbSNP
rs1424513880 252 dbSNP
rs112580560 256 dbSNP
rs1163292990 257 dbSNP
rs1010320082 259 dbSNP
rs1290558 263 dbSNP
rs1029719526 264 dbSNP
rs1318200851 265 dbSNP
rs1325368994 272 dbSNP
rs1427968705 275 dbSNP
rs566473004 276 dbSNP
rs1340817727 277 dbSNP
rs1232289253 278 dbSNP
rs1291263764 280 dbSNP
rs1336640933 283 dbSNP
rs533509401 286 dbSNP
rs907162472 287 dbSNP
rs1283418082 288 dbSNP
rs1445353338 295 dbSNP
rs1218116388 303 dbSNP
rs1263978642 308 dbSNP
rs765604049 310 dbSNP
rs1186036204 311 dbSNP
rs771105530 314 dbSNP
rs774039032 315 dbSNP
rs774467413 319 dbSNP
rs1425898820 321 dbSNP
rs1420514144 331 dbSNP
rs548953032 334 dbSNP
rs765528737 334 dbSNP
rs12120771 341 dbSNP
rs1180952324 345 dbSNP
rs1483700221 355 dbSNP
rs1181512829 363 dbSNP
rs1482040891 365 dbSNP
rs1017090834 378 dbSNP
rs1216621380 381 dbSNP
rs538127738 384 dbSNP
rs1283784778 404 dbSNP
rs959002026 404 dbSNP
rs551304860 408 dbSNP
rs563046681 409 dbSNP
rs556358801 413 dbSNP
rs1479229613 434 dbSNP
rs1311698811 436 dbSNP
rs1227983826 453 dbSNP
rs981047092 463 dbSNP
rs1027092981 471 dbSNP
rs1432869405 485 dbSNP
rs141590028 486 dbSNP
rs1371074999 487 dbSNP
rs771909498 491 dbSNP
rs775494578 493 dbSNP
rs1287596975 494 dbSNP
rs960420186 510 dbSNP
rs1459859701 512 dbSNP
rs991801473 515 dbSNP
rs1474026105 522 dbSNP
rs1425324459 523 dbSNP
rs1193828597 524 dbSNP
rs966074405 525 dbSNP
rs913554254 530 dbSNP
rs35321634 542 dbSNP
rs142857252 552 dbSNP
rs1488738713 556 dbSNP
rs1264642890 558 dbSNP
rs538756220 560 dbSNP
rs1219102126 565 dbSNP
rs763666836 579 dbSNP
rs753357291 580 dbSNP
rs925180779 588 dbSNP
rs761578887 593 dbSNP
rs943157498 615 dbSNP
rs990103300 617 dbSNP
rs1293458977 625 dbSNP
rs1389045047 630 dbSNP
rs1436947311 633 dbSNP
rs370190440 635 dbSNP
rs1273807976 637 dbSNP
rs1038963580 638 dbSNP
rs1379429338 643 dbSNP
rs111789472 651 dbSNP
rs1402085135 655 dbSNP
rs1170911100 672 dbSNP
rs901733546 673 dbSNP
rs867871979 680 dbSNP
rs1464744463 683 dbSNP
rs187129087 686 dbSNP
rs1297750084 690 dbSNP
rs1433767331 691 dbSNP
rs1042157235 694 dbSNP
rs1343463956 700 dbSNP
rs548392647 704 dbSNP
rs1195693056 705 dbSNP
rs1271537310 707 dbSNP
rs907305130 708 dbSNP
rs191516194 710 dbSNP
rs183378588 711 dbSNP
rs1252608848 715 dbSNP
rs572501744 720 dbSNP
rs894491198 721 dbSNP
rs1235514691 724 dbSNP
rs1332239675 732 dbSNP
rs147440173 740 dbSNP
rs1004291005 741 dbSNP
rs1379618584 749 dbSNP
rs1017392490 765 dbSNP
rs1445600831 767 dbSNP
rs1475138747 770 dbSNP
rs898673659 780 dbSNP
rs9951 781 dbSNP
rs1033955338 784 dbSNP
rs573882837 785 dbSNP
rs751635894 785 dbSNP
rs992397767 787 dbSNP
rs1437535229 792 dbSNP
rs1020667990 795 dbSNP
rs966364108 802 dbSNP
rs1202300784 807 dbSNP
rs773677348 815 dbSNP
rs755362288 816 dbSNP
rs943235393 818 dbSNP
rs1028652807 819 dbSNP
rs1310456095 822 dbSNP
rs781603232 827 dbSNP
rs990031241 836 dbSNP
rs1396209451 837 dbSNP
rs1400894989 842 dbSNP
rs1310479586 857 dbSNP
rs1421443277 861 dbSNP
rs1224632721 866 dbSNP
rs1380833331 868 dbSNP
rs975004425 870 dbSNP
rs923115503 871 dbSNP
rs1359157894 878 dbSNP
rs1043476 881 dbSNP
rs945841452 883 dbSNP
rs796858811 885 dbSNP
rs1443169050 891 dbSNP
rs1256915984 907 dbSNP
rs1047633231 913 dbSNP
rs977296153 924 dbSNP
rs887110542 928 dbSNP
rs938763220 929 dbSNP
rs1467439271 930 dbSNP
rs1349022510 931 dbSNP
rs1245081621 940 dbSNP
rs1210769271 943 dbSNP
rs939989105 944 dbSNP
rs1290973516 947 dbSNP
rs1401297476 948 dbSNP
rs757084587 952 dbSNP
rs756229601 955 dbSNP
rs1048589502 958 dbSNP
rs1392645830 963 dbSNP
rs1038469016 966 dbSNP
rs1004899265 971 dbSNP
rs1417410690 977 dbSNP
rs1185961041 980 dbSNP
rs1019761137 982 dbSNP
rs901376805 997 dbSNP
rs1215731101 1013 dbSNP
rs1445717602 1014 dbSNP
rs1370101170 1018 dbSNP
rs1292473823 1023 dbSNP
rs898552610 1029 dbSNP
rs1333772173 1031 dbSNP
rs1270864434 1037 dbSNP
rs1163901373 1044 dbSNP
rs187082719 1047 dbSNP
rs775198832 1052 dbSNP
rs368115462 1056 dbSNP
rs1034294444 1072 dbSNP
rs1428570139 1073 dbSNP
rs1332687692 1075 dbSNP
rs1324043384 1081 dbSNP
rs952983501 1083 dbSNP
rs896648690 1084 dbSNP
rs1011264272 1091 dbSNP
rs36066599 1091 dbSNP
rs1159373356 1094 dbSNP
rs1467331760 1095 dbSNP
rs1424440333 1102 dbSNP
rs1013884731 1134 dbSNP
rs1185933466 1144 dbSNP
rs1383802579 1147 dbSNP
rs1380024326 1148 dbSNP
rs1200087291 1155 dbSNP
rs1021180074 1156 dbSNP
rs1021525643 1159 dbSNP
rs570464721 1162 dbSNP
rs1415891804 1165 dbSNP
rs979482834 1167 dbSNP
rs977768344 1170 dbSNP
rs1230626416 1171 dbSNP
rs551505802 1172 dbSNP
rs1350300980 1177 dbSNP
rs964846174 1180 dbSNP
rs1440025259 1192 dbSNP
rs1203441198 1193 dbSNP
rs1258397743 1196 dbSNP
rs566328444 1199 dbSNP
rs991556035 1208 dbSNP
rs915999458 1217 dbSNP
rs1401291602 1229 dbSNP
rs1169898856 1243 dbSNP
rs1408252619 1244 dbSNP
rs1427918013 1248 dbSNP
rs1173707653 1260 dbSNP
rs923134106 1261 dbSNP
rs771156930 1262 dbSNP
rs1187080383 1284 dbSNP
rs1048368438 1298 dbSNP
rs189960206 1304 dbSNP
rs1180830677 1316 dbSNP
rs1457989441 1318 dbSNP
rs907770598 1318 dbSNP
rs940044885 1320 dbSNP
rs940282588 1324 dbSNP
rs1362849457 1325 dbSNP
rs1278652642 1328 dbSNP
rs1041725947 1329 dbSNP
rs1038803475 1330 dbSNP
rs1173792069 1336 dbSNP
rs1311267691 1349 dbSNP
rs1240583274 1351 dbSNP
rs919928075 1355 dbSNP
rs116243345 1358 dbSNP
rs1401468837 1362 dbSNP
rs1055213124 1368 dbSNP
rs896660103 1369 dbSNP
rs1440245084 1370 dbSNP
rs1013728015 1382 dbSNP
rs1050147751 1404 dbSNP
rs1312733103 1410 dbSNP
rs1354186109 1428 dbSNP
rs1434648645 1432 dbSNP
rs1042679516 1437 dbSNP
rs1393803758 1438 dbSNP
rs1160885126 1441 dbSNP
rs1440679093 1444 dbSNP
rs902790883 1448 dbSNP
rs1175140728 1461 dbSNP
rs1473541763 1462 dbSNP
rs1237554353 1463 dbSNP
rs1001111701 1470 dbSNP
rs1032456789 1476 dbSNP
rs1288045661 1477 dbSNP
rs1217115813 1485 dbSNP
rs1316156598 1486 dbSNP
rs1308216571 1488 dbSNP
rs1304539312 1492 dbSNP
rs1222298483 1496 dbSNP
rs1381532478 1503 dbSNP
rs1021284774 1523 dbSNP
rs1335363113 1525 dbSNP
rs967077023 1546 dbSNP
rs964404194 1551 dbSNP
rs527362825 1560 dbSNP
rs998775215 1565 dbSNP
rs1300620252 1582 dbSNP
rs1454714844 1592 dbSNP
rs1237102532 1603 dbSNP
rs1157292288 1616 dbSNP
rs779125863 1620 dbSNP
rs1030001579 1632 dbSNP
rs959862231 1633 dbSNP
rs548730297 1642 dbSNP
rs915773343 1642 dbSNP
rs983226920 1646 dbSNP
rs1258747715 1647 dbSNP
rs1223490516 1661 dbSNP
rs907696970 1663 dbSNP
rs567225226 1673 dbSNP
rs1274019992 1677 dbSNP
rs984208424 1686 dbSNP
rs963656128 1688 dbSNP
rs538162029 1691 dbSNP
rs1041257771 1692 dbSNP
rs922861199 1696 dbSNP
rs973338151 1697 dbSNP
rs1394810970 1713 dbSNP
rs1417116827 1721 dbSNP
rs550018695 1722 dbSNP
rs1459506016 1723 dbSNP
rs1200475942 1724 dbSNP
rs964530 1728 dbSNP
rs1170457908 1729 dbSNP
rs528804543 1738 dbSNP
rs554335971 1739 dbSNP
rs1374149742 1747 dbSNP
rs1432210640 1762 dbSNP
rs566077503 1775 dbSNP
rs917979284 1778 dbSNP
rs1213314420 1782 dbSNP
rs1332863982 1783 dbSNP
rs1042861855 1786 dbSNP
rs1228224156 1787 dbSNP
rs1307469653 1800 dbSNP
rs1294017765 1803 dbSNP
rs1388989564 1808 dbSNP
rs1396169492 1811 dbSNP
rs949429672 1813 dbSNP
rs1390044849 1820 dbSNP
rs536731379 1826 dbSNP
rs1325586040 1828 dbSNP
rs1438271472 1829 dbSNP
rs1402023892 1833 dbSNP
rs1168049767 1836 dbSNP
rs1461025216 1842 dbSNP
rs1303599360 1854 dbSNP
rs902815262 1859 dbSNP
rs1042606275 1872 dbSNP
rs1233642529 1882 dbSNP
rs1301404460 1884 dbSNP
rs1467354239 1892 dbSNP
rs1240232823 1896 dbSNP
rs1480364984 1902 dbSNP
rs556376244 1902 dbSNP
rs1236089719 1904 dbSNP
rs576471787 1905 dbSNP
rs1205088191 1906 dbSNP
rs1012808455 1909 dbSNP
rs1054001155 1917 dbSNP
rs1479496700 1921 dbSNP
rs900171597 1927 dbSNP
rs1211486665 1928 dbSNP
rs1232541321 1929 dbSNP
rs995826069 1935 dbSNP
rs1030057713 1938 dbSNP
rs1378719467 1942 dbSNP
rs763830858 1948 dbSNP
rs1390423727 1955 dbSNP
rs1267596119 1960 dbSNP
rs1393706346 1965 dbSNP
rs1304008840 1966 dbSNP
rs139643527 1972 dbSNP
rs556451071 1973 dbSNP
rs1014747360 1979 dbSNP
rs963241885 1981 dbSNP
rs1182826504 1985 dbSNP
rs577996874 1992 dbSNP
rs141759560 1997 dbSNP
rs959650886 2001 dbSNP
rs560273396 2005 dbSNP
rs1209230191 2013 dbSNP
rs1356332325 2014 dbSNP
rs1280456484 2033 dbSNP
rs915406764 2046 dbSNP
rs1362786591 2048 dbSNP
rs1373017533 2051 dbSNP
rs1314324129 2058 dbSNP
rs917910364 2061 dbSNP
rs1460787198 2062 dbSNP
rs1374811360 2072 dbSNP
rs1311023296 2080 dbSNP
rs946875954 2090 dbSNP
rs763154954 2102 dbSNP
rs1402949586 2105 dbSNP
rs764342721 2105 dbSNP
rs1299564166 2109 dbSNP
rs751636756 2113 dbSNP
rs761970606 2114 dbSNP
rs1310659307 2117 dbSNP
rs1342069690 2121 dbSNP
rs1042789552 2123 dbSNP
rs1453405146 2124 dbSNP
rs1278730915 2127 dbSNP
rs527416352 2129 dbSNP
rs1307640989 2131 dbSNP
rs934316808 2132 dbSNP
rs542670649 2135 dbSNP
rs1475558517 2136 dbSNP
rs560727976 2141 dbSNP
rs780051703 2146 dbSNP
rs1256849325 2148 dbSNP
rs760005904 2148 dbSNP
rs1209035947 2157 dbSNP
rs373949285 2161 dbSNP
rs754638525 2162 dbSNP
rs1348161588 2163 dbSNP
rs778649818 2166 dbSNP
rs747716607 2167 dbSNP
rs771578106 2169 dbSNP
rs768664113 2171 dbSNP
rs770284140 2172 dbSNP
rs775754861 2173 dbSNP
rs41310116 2176 dbSNP
rs1403986125 2177 dbSNP
rs549361146 2178 dbSNP
rs1317453202 2179 dbSNP
rs1380293667 2180 dbSNP
rs1015647857 2181 dbSNP
rs1333747743 2183 dbSNP
rs1462119810 2187 dbSNP
rs1448939875 2188 dbSNP
rs1309840220 2189 dbSNP
rs571650903 2194 dbSNP
rs1232104241 2198 dbSNP
rs1257820358 2200 dbSNP
rs767719565 2202 dbSNP
rs750515892 2204 dbSNP
rs1476706687 2206 dbSNP
rs1248920207 2209 dbSNP
rs1459330776 2212 dbSNP
rs1192969453 2215 dbSNP
rs760760864 2217 dbSNP
rs1252842911 2218 dbSNP
rs932208955 2219 dbSNP
rs1171279507 2222 dbSNP
rs766399241 2224 dbSNP
rs890115550 2225 dbSNP
rs753672242 2227 dbSNP
rs567148100 2230 dbSNP
rs1466932603 2234 dbSNP
rs778506143 2242 dbSNP
rs752412061 2244 dbSNP
rs41306205 2245 dbSNP
rs768079599 2249 dbSNP
rs1331730237 2250 dbSNP
rs1340049550 2260 dbSNP
rs1269494844 2265 dbSNP
rs535608943 2270 dbSNP
rs375365358 2275 dbSNP
rs566237739 2281 dbSNP
rs1014589074 2288 dbSNP
rs1261629753 2289 dbSNP
rs41299569 2296 dbSNP
rs1441998584 2297 dbSNP
rs899002098 2302 dbSNP
rs555006899 2306 dbSNP
rs976888191 2315 dbSNP
rs1411700901 2325 dbSNP
rs868324800 2332 dbSNP
rs1420262676 2342 dbSNP
rs1427311304 2344 dbSNP
rs1167867409 2346 dbSNP
rs757093865 2358 dbSNP
rs1167310342 2367 dbSNP
rs1030076252 2376 dbSNP
rs186459566 2379 dbSNP
rs985676419 2381 dbSNP
rs369764274 2382 dbSNP
rs1034699660 2387 dbSNP
rs1250730853 2389 dbSNP
rs1206061742 2390 dbSNP
rs915499860 2404 dbSNP
rs978270613 2405 dbSNP
rs1349884837 2409 dbSNP
rs537491083 2412 dbSNP
rs1391193338 2416 dbSNP
rs193295707 2419 dbSNP
rs924155531 2426 dbSNP
rs1444573673 2428 dbSNP
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rs913383188 5519 dbSNP
rs1009893025 5523 dbSNP
rs1159614101 5526 dbSNP
rs1453503732 5534 dbSNP
rs1024858188 5542 dbSNP
rs371701561 5555 dbSNP
rs145565417 5556 dbSNP
rs947701388 5556 dbSNP
rs1329708453 5557 dbSNP
rs1481104315 5559 dbSNP
rs1043248692 5560 dbSNP
rs1002004254 5570 dbSNP
rs1181186914 5573 dbSNP
rs1033499643 5575 dbSNP
rs551903731 5590 dbSNP
rs889457096 5598 dbSNP
rs942343245 5601 dbSNP
rs1040791963 5602 dbSNP
rs773990177 5607 dbSNP
rs1248498233 5609 dbSNP
rs147009651 5612 dbSNP
rs912167115 5619 dbSNP
rs964846862 5623 dbSNP
rs974895524 5624 dbSNP
rs34575836 5625 dbSNP
rs1319570078 5628 dbSNP
rs552948728 5653 dbSNP
rs936416767 5656 dbSNP
rs1172334683 5663 dbSNP
rs1305307410 5677 dbSNP
rs761087149 5693 dbSNP
rs1424950185 5698 dbSNP
rs1364593272 5701 dbSNP
rs1045666 5711 dbSNP
rs1476109703 5718 dbSNP
rs866924099 5724 dbSNP
rs1440980556 5725 dbSNP
rs370670602 5730 dbSNP
rs11549410 5734 dbSNP
rs888276239 5739 dbSNP
rs1192468844 5740 dbSNP
rs913525775 5742 dbSNP
rs1005472194 5745 dbSNP
rs945066188 5749 dbSNP
rs1222982202 5750 dbSNP
rs1372453406 5752 dbSNP
rs9681 5760 dbSNP
rs1441085483 5765 dbSNP
rs542543786 5769 dbSNP
rs970063747 5771 dbSNP
rs1001558312 5773 dbSNP
rs1002097624 5777 dbSNP
rs1035677579 5778 dbSNP
rs960182431 5782 dbSNP
rs989298442 5786 dbSNP
rs1054879468 5787 dbSNP
rs1405962927 5788 dbSNP
rs1275502915 5799 dbSNP
rs1045691 5806 dbSNP
rs913401906 5809 dbSNP
rs995296577 5823 dbSNP
rs1026400984 5824 dbSNP
rs557730357 5825 dbSNP
rs1396647222 5835 dbSNP
rs774006744 5836 dbSNP
rs549603599 5847 dbSNP
rs1459986140 5852 dbSNP
rs969256561 5852 dbSNP
rs575997383 5857 dbSNP
rs12071958 5859 dbSNP
rs1469876249 5872 dbSNP
rs561570612 5877 dbSNP
rs1439741415 5886 dbSNP
rs942938129 5896 dbSNP
rs12071969 5903 dbSNP
rs922254092 5904 dbSNP
rs1316102001 5907 dbSNP
rs1265546098 5908 dbSNP
rs1224596325 5910 dbSNP
rs1188245579 5915 dbSNP
rs1273413646 5916 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 10905.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065668. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucuccguccaaggaCCUAGUa 5'
                        |||||| 
Target 5' -----uaaguguggGGAUCAa 3'
 		1 - 16
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065668
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_7
Location of target site ENST00000356554.3 | 3UTR | UAAGUGUGGGGAUCAAACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE32688 Pancreatic cancer 0.397 1.2e-2 0.240 9.3e-2 32 Click to see details
GSE26953 Aortic valvular endothelial cells -0.335 5.5e-2 -0.312 6.9e-2 24 Click to see details
GSE21687 Ependynoma primary tumors 0.178 8.0e-2 0.167 9.4e-2 64 Click to see details
GSE17498 Multiple myeloma -0.203 1.0e-1 -0.114 2.4e-1 40 Click to see details
GSE28544 Breast cancer 0.201 1.7e-1 0.257 1.1e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.216 1.8e-1 -0.051 4.2e-1 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.169 2.1e-1 -0.228 1.4e-1 25 Click to see details
GSE19783 ER+ ER+ breast cancer 0.185 2.2e-1 0.083 3.6e-1 20 Click to see details
GSE27834 Pluripotent stem cells -0.196 2.3e-1 -0.121 3.3e-1 16 Click to see details
GSE19783 ER- ER- breast cancer -0.067 2.8e-1 -0.057 3.1e-1 79 Click to see details
GSE42095 Differentiated embryonic stem cells 0.126 2.8e-1 0.000 5.0e-1 23 Click to see details
GSE19350 CNS germ cell tumors -0.165 3.0e-1 0.280 1.9e-1 12 Click to see details
GSE19536 Breast cancer -0.038 3.5e-1 -0.043 3.4e-1 100 Click to see details
GSE38226 Liver fibrosis -0.05 4.1e-1 -0.102 3.3e-1 21 Click to see details
GSE21849 B cell lymphoma 0.028 4.4e-1 0.033 4.3e-1 29 Click to see details
GSE17306 Multiple myeloma 0.017 4.5e-1 0.141 1.7e-1 49 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.013 4.8e-1 0.053 4.0e-1 25 Click to see details
GSE28260 Renal cortex and medulla -0.006 4.9e-1 -0.010 4.9e-1 13 Click to see details
GSE28260 Renal cortex and medulla -0.006 4.9e-1 -0.010 4.9e-1 13 Click to see details
GSE14794 Lymphoblastoid cells 0 5.0e-1 0.040 3.5e-1 90 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
194 hsa-miR-640 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT097121 TNPO1 transportin 1 2 2
MIRT115090 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 4
MIRT204603 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204634 MOB4 MOB family member 4, phocein 2 8
MIRT344451 MTRNR2L1 MT-RNR2-like 1 2 2
MIRT405772 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT445876 SENP6 SUMO1/sentrin specific peptidase 6 2 2
MIRT497418 FAM46A family with sequence similarity 46 member A 2 2
MIRT504394 HMX2 H6 family homeobox 2 2 4
MIRT504691 SLCO2B1 solute carrier organic anion transporter family member 2B1 2 8
MIRT512386 MTRNR2L3 MT-RNR2-like 3 2 6
MIRT513003 MAN1A2 mannosidase alpha class 1A member 2 2 2
MIRT513084 USP9X ubiquitin specific peptidase 9, X-linked 2 2
MIRT519122 ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 2 2
MIRT523836 F2RL1 F2R like trypsin receptor 1 2 2
MIRT565356 TMCC1 transmembrane and coiled-coil domain family 1 2 2
MIRT575895 Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 3
MIRT576894 Poteg POTE ankyrin domain family, member G 2 2
MIRT613780 RPS6 ribosomal protein S6 2 2
MIRT613934 POLR3A RNA polymerase III subunit A 2 2
MIRT614348 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT614534 NOA1 nitric oxide associated 1 2 2
MIRT617019 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT618247 MANEAL mannosidase endo-alpha like 2 2
MIRT619051 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT619442 ZNF517 zinc finger protein 517 2 2
MIRT619723 FPR2 formyl peptide receptor 2 2 2
MIRT620179 TRIM72 tripartite motif containing 72 2 2
MIRT620370 ANKRD62 ankyrin repeat domain 62 2 2
MIRT621263 RTN2 reticulon 2 2 2
MIRT621463 APOH apolipoprotein H 2 2
MIRT621571 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT621683 TSPYL1 TSPY like 1 2 2
MIRT622866 PDE7A phosphodiesterase 7A 2 2
MIRT624669 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT625607 ZNF84 zinc finger protein 84 2 2
MIRT626111 IL23R interleukin 23 receptor 2 2
MIRT628380 CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 2 2
MIRT628553 MELK maternal embryonic leucine zipper kinase 2 2
MIRT628671 C2orf72 chromosome 2 open reading frame 72 2 2
MIRT628747 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT628776 TMEM154 transmembrane protein 154 2 2
MIRT628918 ZNF430 zinc finger protein 430 2 2
MIRT629174 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT629209 C12orf66 chromosome 12 open reading frame 66 2 2
MIRT629267 SLC5A8 solute carrier family 5 member 8 2 2
MIRT629498 AS3MT arsenite methyltransferase 2 2
MIRT629665 USP1 ubiquitin specific peptidase 1 2 2
MIRT629760 STK25 serine/threonine kinase 25 2 2
MIRT630899 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT631105 SLC15A2 solute carrier family 15 member 2 2 2
MIRT631112 ATCAY ATCAY, caytaxin 2 2
MIRT631450 DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 2 2
MIRT631505 FFAR4 free fatty acid receptor 4 2 2
MIRT631580 ITGAL integrin subunit alpha L 2 2
MIRT631836 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT632342 SWSAP1 SWIM-type zinc finger 7 associated protein 1 2 2
MIRT633214 ZNF584 zinc finger protein 584 2 2
MIRT633223 ZNF43 zinc finger protein 43 2 2
MIRT633480 ARIH2OS ariadne RBR E3 ubiquitin protein ligase 2 opposite strand 2 2
MIRT633511 LRRC27 leucine rich repeat containing 27 2 2
MIRT633615 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT633652 SLC28A1 solute carrier family 28 member 1 2 2
MIRT633677 ZNF576 zinc finger protein 576 2 2
MIRT634196 TMOD2 tropomodulin 2 2 4
MIRT634388 PLSCR1 phospholipid scramblase 1 2 2
MIRT635817 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT635962 TTC31 tetratricopeptide repeat domain 31 2 2
MIRT636114 YPEL1 yippee like 1 2 2
MIRT636164 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT636768 CLUAP1 clusterin associated protein 1 2 2
MIRT637092 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT637316 FAM9B family with sequence similarity 9 member B 2 2
MIRT637540 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT637628 ZNF431 zinc finger protein 431 2 2
MIRT637826 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT637945 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT637968 IRF1 interferon regulatory factor 1 2 2
MIRT638321 RNF11 ring finger protein 11 2 2
MIRT638386 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT639244 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT642608 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT642793 SLC1A5 solute carrier family 1 member 5 2 2
MIRT643847 LACTB lactamase beta 2 4
MIRT644705 ZNF321P zinc finger protein 321, pseudogene 2 2
MIRT645148 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 3
MIRT646671 CCDC69 coiled-coil domain containing 69 2 2
MIRT647780 ASB8 ankyrin repeat and SOCS box containing 8 2 2
MIRT648554 WDR92 WD repeat domain 92 2 2
MIRT648990 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT649099 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT650141 ZNF426 zinc finger protein 426 2 2
MIRT650791 GSR glutathione-disulfide reductase 2 2
MIRT654967 PLEKHA2 pleckstrin homology domain containing A2 2 2
MIRT655099 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT655516 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT656289 METTL14 methyltransferase like 14 2 2
MIRT656497 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT657074 JPH2 junctophilin 2 2 2
MIRT657314 HOOK3 hook microtubule tethering protein 3 2 2
MIRT657419 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 4
MIRT659032 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659535 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT661532 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT662029 FUT2 fucosyltransferase 2 2 2
MIRT663206 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT663357 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT663557 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663650 POLM DNA polymerase mu 2 2
MIRT663694 ABHD17B abhydrolase domain containing 17B 2 2
MIRT664370 CYB5A cytochrome b5 type A 2 2
MIRT664783 LIAS lipoic acid synthetase 2 4
MIRT665561 TXNL1 thioredoxin like 1 2 2
MIRT665950 TAOK1 TAO kinase 1 2 2
MIRT667338 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT667804 ITIH5 inter-alpha-trypsin inhibitor heavy chain family member 5 2 2
MIRT668804 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT669470 ARPC2 actin related protein 2/3 complex subunit 2 2 2
MIRT669599 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT669806 STOML1 stomatin like 1 2 2
MIRT669944 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT670292 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670381 EMP2 epithelial membrane protein 2 2 2
MIRT670481 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670531 KIF1C kinesin family member 1C 2 4
MIRT670565 GLTP glycolipid transfer protein 2 2
MIRT670603 NPHP1 nephrocystin 1 2 2
MIRT670880 CYTIP cytohesin 1 interacting protein 2 2
MIRT670931 LIPG lipase G, endothelial type 2 2
MIRT671261 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT671794 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT671897 GBP4 guanylate binding protein 4 2 2
MIRT672000 SLC35F6 solute carrier family 35 member F6 2 4
MIRT672074 KIR3DX1 killer cell immunoglobulin like receptor, three Ig domains X1 2 2
MIRT672319 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT672853 C22orf29 retrotransposon Gag like 10 2 2
MIRT673395 WNT7B Wnt family member 7B 2 2
MIRT673537 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT674285 ZNF724P zinc finger protein 724 2 2
MIRT674494 TIRAP TIR domain containing adaptor protein 2 2
MIRT675460 NUBPL nucleotide binding protein like 2 2
MIRT675569 TRIP11 thyroid hormone receptor interactor 11 2 2
MIRT676068 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676254 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676377 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676758 SNX2 sorting nexin 2 2 2
MIRT676773 NPHS1 NPHS1, nephrin 2 2
MIRT676874 ENSA endosulfine alpha 2 2
MIRT676918 KLHDC8A kelch domain containing 8A 2 2
MIRT676944 S1PR3 sphingosine-1-phosphate receptor 3 2 2
MIRT676957 HFE hemochromatosis 2 2
MIRT676967 RNF19B ring finger protein 19B 2 2
MIRT676972 ZNF708 zinc finger protein 708 2 2
MIRT677042 ZNF34 zinc finger protein 34 2 2
MIRT677070 VMAC vimentin type intermediate filament associated coiled-coil protein 2 2
MIRT677093 MFSD11 major facilitator superfamily domain containing 11 2 4
MIRT677134 P2RX7 purinergic receptor P2X 7 2 2
MIRT677179 ZNF786 zinc finger protein 786 2 2
MIRT677228 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677320 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT677455 PDLIM3 PDZ and LIM domain 3 2 2
MIRT677809 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT677937 ZNF519 zinc finger protein 519 2 2
MIRT678063 UBN2 ubinuclein 2 2 4
MIRT678072 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678252 FXN frataxin 2 2
MIRT678315 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678367 XIAP X-linked inhibitor of apoptosis 2 4
MIRT678372 RNF115 ring finger protein 115 2 2
MIRT678410 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678518 ZNF347 zinc finger protein 347 2 2
MIRT678566 CDK4 cyclin dependent kinase 4 2 2
MIRT678580 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 2
MIRT678820 PDE6A phosphodiesterase 6A 2 2
MIRT678917 XPOT exportin for tRNA 2 2
MIRT679217 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679437 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT679595 HILPDA hypoxia inducible lipid droplet associated 2 2
MIRT679755 TLR6 toll like receptor 6 2 2
MIRT679800 APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A 2 2
MIRT680057 CD96 CD96 molecule 2 2
MIRT680116 CCDC30 coiled-coil domain containing 30 2 4
MIRT680181 ZNF554 zinc finger protein 554 2 2
MIRT680439 WDR12 WD repeat domain 12 2 2
MIRT680789 ZNF578 zinc finger protein 578 2 2
MIRT692464 APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 2 2
MIRT702952 HIP1 huntingtin interacting protein 1 2 2
MIRT706016 ZSCAN2 zinc finger and SCAN domain containing 2 2 2
MIRT706032 F2R coagulation factor II thrombin receptor 2 2
MIRT706135 MTRNR2L10 MT-RNR2-like 10 2 2
MIRT706394 HAS2 hyaluronan synthase 2 2 2
MIRT713293 DCP2 decapping mRNA 2 2 2
MIRT716583 BRAP BRCA1 associated protein 2 2
MIRT720433 C19orf47 chromosome 19 open reading frame 47 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-640 Paclitaxel 36314 NSC125973 approved resistant High Ovarian Cancer tissue and cell line (SKOV3)
hsa-miR-640 Cetuximab resistant High Colon Cancer cell line
hsa-miR-640 Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (WM266) (1uM)
hsa-miR-640 Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (WM266) (1uM)
hsa-miR-640 Mitoxantrone 4212 NSC279836 approved resistant High Breast Cancer cell line (BT-20, BT-474, BT-549, CAMA-1, HCC1143, HCC1395, HCC1569, HCC1806, HCC-1937, HCC1954, HCC202, HCC38, HCC70, Hs578T, MCF-7, MDA-MB-175VII, MDA-MB-231, MDA-MB-361, MDA-MB-415, MDA-MB-436, MDA-MB-468, SKBR3, T47D, UACC812, EVSA-T, MPE-600 , SK-BR-
hsa-miR-640 Sorafenib 216239 NSC747971 approved sensitive Low Clear Cell Renal Cell Carcinoma cell line (786-O)
hsa-mir-640 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-640 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-640 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-640 Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-640 Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-640 Tamoxifen 2733525 NSC180973 approved sensitive cell line (TamR8)
hsa-miR-640 Oxaliplatin 6857599 NSC266046 approved sensitive cell line (IGROV-1)
hsa-miR-640 Cisplatin 5460033 NSC119875 approved sensitive cell line (IGROV-1)
hsa-miR-640 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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