pre-miRNA Information
pre-miRNA hsa-mir-4640   
Genomic Coordinates chr6: 30890883 - 30890972
Description Homo sapiens miR-4640 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4640-5p
Sequence 9| UGGGCCAGGGAGCAGCUGGUGGG |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1392105945 7 dbSNP
rs939712790 9 dbSNP
rs762825841 15 dbSNP
rs71552023 20 dbSNP
rs1305909531 21 dbSNP
rs750017220 21 dbSNP
rs1375436057 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B32FZJ miR-4640 Safety Biomarker (SAF) Clinical/Experimental Data Expression lower Urine Quantitative polymerase chain reaction
Gene Information
Gene Symbol SLIT1   
Synonyms MEGF4, SLIL1, SLIT-1, SLIT3
Description slit guidance ligand 1
Transcript NM_003061   
Expression
Putative miRNA Targets on SLIT1
3'UTR of SLIT1
(miRNA target sites are highlighted)
>SLIT1|NM_003061|3'UTR
   1 CGCTGGGCGTGGACAGGCCGGTGAGGGCGGGCAAGGGGCCCCAGCCGCTGCAGCAGCGGAGACAGTCGCCAGCAGCTGGG
  81 CTGGGGTGCAGGTCATCACAGGACGGCTCCTGGGCAGCTGGGCCCTCCTGGGTGGGGTGGTGCCAGAGCAGCCTTTTAAA
 161 AGCAAATTGCGCCATAGCTGGGGGCAGCGGGGGTGGGCGAGGCCTGAGCTGCGGGCTGCCCTCTCCGGAAGTGCCTTGCA
 241 CAAATAGGCGCTTAATAAATATTTGTTGAGTGAATGTGTGCGTGAGGTCAGGCCAAGAAGTGCAGAACGATGACACCCCT
 321 CCTTACCTGCTATCTGAATCTGGAGAAGAAAAATGACAGCCTTCCAAACCAACCCTTCCCTTTGGCCTGTGGCCCAGGCT
 401 GGCTTGGAACTGGGTCTGTGGCCCCAGAAGCCTCTTACCCCTCTGCGGGCAACCATGAAGTACTGTCAGCCTCCCCGGGA
 481 AGCCAGCCTGGTTCATTCTGCTGCTACAGAATCTGCTGGTGGTAGGCCAGGCTCTGGAGCGGGGGTGCCGCCTCCTGCTG
 561 GCCAGGGAGGGTCGGACCCTTGCCCCCTGGGCTGACTGGCAGCTCTGCAGCCACGGCTTGGGAACGAGGCTGTGGGTGGA
 641 GGTGGTTCTTAGGACCAGGCCTCTGAATCCTAAAGTTCTAGCATGACTACTGTAGCTGCGAGGGCTTATGTGGAGGAAAC
 721 AGTCACAGGGGCTGCTCAGGGTGGCAGACCCCACTAAAGAGGGCAGAGGGTTCTTTGCTCTAGATAAACAAACATCATCT
 801 GCCTCCAGACACTGGCCACAGTAGGAGTATTGGTCCTGGGCTTCCCCAGCCACCAGTCAGCCACAAGCTGTCGGTGACCT
 881 ATTGGTAGAGGGACTGGGTGTGAGGGTCTGGGCCAGGGTGCTTGACCTGGGAGCAGCTGGTTCAGAGTCCTTCACACCGC
 961 AGGCCAGTAGGGAGCAGTGGAAGGGACAGTGCTCCAGGCATTGGGAAGTCCCTGCTGGCTCTATCACTCGGGGCAAACTT
1041 CTCCCCACCTGGGCCTTGGGTTCTTCAGCTATAAAATGGCCAGAGGTGGGGGGCGGGATGACTAAAGGAACAGTGCAGAC
1121 TCCCCCACTGTGGTCTTGGGAGGCCAGAGGAGTTAGAAGACCTATCTATCTATCTATCTATCTACATTGATCACATCAAA
1201 AGTATTTATGTGCCTAACCCGGGGCTGGGGATTGTGGACGTTCTGGCCTAATGGACAGATGTGAACTCATCCCAGAGCAT
1281 CGCAGGAATGACCAGGATGCCCGGGAAGAGTTGAGCTGAGTGGGGGCTCCAGCCACAGACAGCGGCCCAGGCCAGGGAGT
1361 TGCTGGCAACGAAGGAGCCAGTGGTGGAAGAAGAAGAGGCCCTGAATATACGATTGCCTGCCCACGTTGTCTTCTCTTCC
1441 ATACACAGTGAAAATGTAGAAAGATGGTTTGTGAGGCCAAACTGTGAATGGGCTAAAGGGAGGCAAAGTTGCACTCTCCT
1521 TCCCCAGAGGGCTCACCAAGAGGGCACACCCCCGGGGGTTCTGGTGGGCAACGGGGGTGAGCATGTCCCTGCCCTGGCTC
1601 CCTCCATCTGTGACCAGGAGGCATGGCTGGGTGTATGTTCAGGTGAGGCTCAGAGTGGCATTGTGTCCCTGTCCCCTGCC
1681 CAGGGCAGTGAGGGGAGCCCTTGATGCTGATTAGAAGGCTAGAACTGGGGTAGAGGTGCCTGGCATGTCTCATGCCATGG
1761 GGACTCAATCTAGCAACTGTGAGTCCTGGGGTCCCTGTGATGGGAAGAGGGCAGTGCCCTGCCCAATGTGGCAGGTGTCC
1841 TCATGGCAGGATCTGCCCCTCACCAGGGGGCTGGGATCTACTTGCTTGGAGCTCTGAGCAAGGCCACAATGCCCGCCCCC
1921 ACCCCCAAGTAGACTGCAGCCTGGGCCTCATGGGGCTTCTCCCAGGCCCACATGGCATCCCTCTCTGAGTTTCCAGGCCA
2001 CCGTGGGACCCTGCAGAGCATCTGCACCGGGCTGGATAGGGCAGAAAAGCTCAAGGGCAGCTAGCTTGCCTCTTCCCTGG
2081 AAGAAAGGTGCTCTGGGACTCACCAACCCTGAGAAAGATAGCTTTCCTGGCCACCACCATTCCCCACCACCCTGGAGAAG
2161 CCAATTCCCAGGCTTGAAGGGCACTGGCTGGCAGGAGGCCTCTTCATTCTGCAGGAGGTGGAAAGGACACCTGTAGACAG
2241 GTGATGCTCACCCCTCACCTGGCGCCATGGGGCTGGGAGGTGAGCGGCTGGCATGTTTGTTCCTAGGGAGCACCATGTGA
2321 GCTTAAGGCTCCCCTGACCGGCCCCACCACATGGCCCAGCCTCCTAGCACAGCAGCGCTGACCTCAGTGCAGTCTGAGGA
2401 TTGGAATCCACCATGAGATGATGTGAGAGCTGTGTGCCCCAGGATCAACTTTTTCTCCAACTTGGCCATCAGCCAGCGAG
2481 TTGCTAAGGACCTGAGTCAGCACTCACGTTGCCTATTCACACTCCGCTTGAAAGTCCGGAAGGTGGCTACTGCAAAATCA
2561 CCCCTCTGAGAAGTCCTCTCTCCACATCTTGTCCCCCTTTGTGAAGACCCCTAGTTCGCTCTGCATTTTAGGCATGAAGA
2641 GATACAGCAGGGTGCGTCCGGAGGGAGCTGTGGCCTTGCAACACCACTGGCAACAGGGCCGGGGCTCCCGGTGAAGGTGT
2721 CAGGAAGTGGAAAAGGCTGGACTTTGTCTCCTCTTTGCCTGCTGGTAGCCTAACCGCAAAAGTATCTCTTTATACAGAAT
2801 ACTTACAGATTCTAATATATATTTGTATTTCATTTTGTTACAGTATTTTTATATGTTAAAGTCAACATCCAGCGTCTTGT
2881 TTTGCCTTTCAGATGCTATGTGGTCGTGGCACGTTTTGTTGGGGGTTTCTGTAGTCGTCTTGTTTGGATCAACTCCTAGA
2961 GGCTGGTTTAGAACAGGCCCATGAGGGAGCTGCACCTGCCCTGGAAGTATTGTTTTAGACTATGTCGATATTGTCTGTTG
3041 TCTTCCATGTGAACATGACATTGAGTCACTCTGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggGUGGUCGAC-GAGG-----GACCGGgu 5'
            ||:|| ||| ||||     ||||||  
Target 5' aaCATCATCTGCCTCCAGACACTGGCCac 3'
791 - 819 149.00 -24.80
2
miRNA  3' gggugGUCGACGAGGGACCGGgu 5'
               :||||  |:|||||||  
Target 5' aaagaTAGCT--TTCCTGGCCac 3'
2114 - 2134 142.00 -21.10
3
miRNA  3' ggguggUCG-AC---GA-GGGACCGGGu 5'
                ||| ||   || |||||||:| 
Target 5' ggggtgAGCATGTCCCTGCCCTGGCTCc 3'
1574 - 1601 141.00 -22.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30488297 5 COSMIC
COSN31592986 8 COSMIC
COSN13294117 19 COSMIC
COSN8407235 22 COSMIC
COSN30536886 54 COSMIC
COSN30499738 57 COSMIC
COSN26152806 403 COSMIC
COSN8727729 473 COSMIC
COSN20092182 541 COSMIC
COSN23860398 872 COSMIC
COSN7076524 1030 COSMIC
COSN20107464 1171 COSMIC
COSN20753624 1370 COSMIC
COSN8212001 1405 COSMIC
COSN1508395 1503 COSMIC
COSN1124951 1597 COSMIC
COSN20092181 2029 COSMIC
COSN27904743 2046 COSMIC
COSN5890425 2056 COSMIC
COSN26354338 2059 COSMIC
COSN31960526 2366 COSMIC
COSN24042039 2385 COSMIC
COSN7076523 2404 COSMIC
COSN23772152 2470 COSMIC
COSN19562140 2505 COSMIC
COSN5890424 2773 COSMIC
COSN16404251 2894 COSMIC
COSN23455984 2902 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs370949157 1 dbSNP
rs756060875 2 dbSNP
rs752688043 5 dbSNP
rs201384867 8 dbSNP
rs146679652 9 dbSNP
rs1394166020 10 dbSNP
rs774537285 11 dbSNP
rs1286835901 12 dbSNP
rs375035388 13 dbSNP
rs1480545774 15 dbSNP
rs369430151 19 dbSNP
rs773508999 20 dbSNP
rs770209413 22 dbSNP
rs748535014 23 dbSNP
rs777224842 25 dbSNP
rs377563565 26 dbSNP
rs199759639 28 dbSNP
rs778674540 29 dbSNP
rs1346905930 31 dbSNP
rs757033258 34 dbSNP
rs749094624 35 dbSNP
rs777370967 36 dbSNP
rs755972258 38 dbSNP
rs1238542303 39 dbSNP
rs1278177554 39 dbSNP
rs1347916577 42 dbSNP
rs773391484 43 dbSNP
rs1280824536 45 dbSNP
rs752532303 46 dbSNP
rs533484396 47 dbSNP
rs751705025 51 dbSNP
rs776917721 57 dbSNP
rs907390898 58 dbSNP
rs1435393070 59 dbSNP
rs1045666337 64 dbSNP
rs1323442978 67 dbSNP
rs1014075883 68 dbSNP
rs1046543638 85 dbSNP
rs1422647339 88 dbSNP
rs1305057941 103 dbSNP
rs894339532 104 dbSNP
rs1055207361 105 dbSNP
rs938115947 114 dbSNP
rs1327032936 115 dbSNP
rs925392809 120 dbSNP
rs1421761682 122 dbSNP
rs1169244401 124 dbSNP
rs1454021053 126 dbSNP
rs559460354 127 dbSNP
rs1251412615 132 dbSNP
rs541419311 135 dbSNP
rs574010292 142 dbSNP
rs1489043752 146 dbSNP
rs1194719636 149 dbSNP
rs1248067063 155 dbSNP
rs1439166551 164 dbSNP
rs573813568 170 dbSNP
rs945415931 171 dbSNP
rs561691938 174 dbSNP
rs543212115 178 dbSNP
rs878981765 182 dbSNP
rs939799973 184 dbSNP
rs142552293 188 dbSNP
rs557418494 189 dbSNP
rs1166198967 191 dbSNP
rs1398968430 192 dbSNP
rs1392129389 193 dbSNP
rs770901794 196 dbSNP
rs539124887 198 dbSNP
rs966177001 199 dbSNP
rs1460727290 201 dbSNP
rs910761370 212 dbSNP
rs201314265 213 dbSNP
rs1249093531 218 dbSNP
rs990109283 219 dbSNP
rs1198843417 220 dbSNP
rs951854114 226 dbSNP
rs774122173 227 dbSNP
rs1368050828 228 dbSNP
rs993544650 234 dbSNP
rs1170656990 247 dbSNP
rs961758768 250 dbSNP
rs1024212597 256 dbSNP
rs1031851960 259 dbSNP
rs1372282129 267 dbSNP
rs1374823791 268 dbSNP
rs999077511 274 dbSNP
rs1175894518 275 dbSNP
rs1404162013 276 dbSNP
rs1471196958 279 dbSNP
rs553439235 281 dbSNP
rs1014213488 282 dbSNP
rs112041470 284 dbSNP
rs1292863751 286 dbSNP
rs554519915 290 dbSNP
rs1327611644 292 dbSNP
rs1055596991 293 dbSNP
rs1282305848 301 dbSNP
rs1000036980 304 dbSNP
rs1178587985 308 dbSNP
rs749030756 309 dbSNP
rs1055322568 317 dbSNP
rs1407732367 321 dbSNP
rs11591543 322 dbSNP
rs1481805911 332 dbSNP
rs1253232728 333 dbSNP
rs1043841890 334 dbSNP
rs1478220486 336 dbSNP
rs1036919713 344 dbSNP
rs1485098925 358 dbSNP
rs549743436 373 dbSNP
rs1481531429 375 dbSNP
rs945357251 380 dbSNP
rs1177278971 387 dbSNP
rs913938609 389 dbSNP
rs1344939341 400 dbSNP
rs1452269569 411 dbSNP
rs939937473 413 dbSNP
rs912491594 418 dbSNP
rs1400150153 423 dbSNP
rs867251381 425 dbSNP
rs1211820749 426 dbSNP
rs1282063655 426 dbSNP
rs986636372 437 dbSNP
rs1301723381 438 dbSNP
rs932518544 442 dbSNP
rs1040604710 446 dbSNP
rs537618836 447 dbSNP
rs1488556640 450 dbSNP
rs1221911762 455 dbSNP
rs779691273 457 dbSNP
rs1490911845 459 dbSNP
rs1221895987 462 dbSNP
rs986235245 472 dbSNP
rs570229664 475 dbSNP
rs773499611 476 dbSNP
rs552025800 477 dbSNP
rs1288974853 486 dbSNP
rs952263606 487 dbSNP
rs1363090796 490 dbSNP
rs1438183784 491 dbSNP
rs555683199 498 dbSNP
rs920318450 516 dbSNP
rs559806962 517 dbSNP
rs1372148082 519 dbSNP
rs547468145 526 dbSNP
rs1311158823 529 dbSNP
rs971866490 538 dbSNP
rs1031652251 540 dbSNP
rs755834674 541 dbSNP
rs1289694914 547 dbSNP
rs971660424 549 dbSNP
rs1025011836 550 dbSNP
rs1013083133 551 dbSNP
rs1024016630 559 dbSNP
rs529337845 563 dbSNP
rs1157167990 569 dbSNP
rs745509802 573 dbSNP
rs561629652 574 dbSNP
rs1162159616 577 dbSNP
rs543348359 578 dbSNP
rs904385030 580 dbSNP
rs1406663914 581 dbSNP
rs536913089 583 dbSNP
rs563908120 587 dbSNP
rs1439512922 589 dbSNP
rs1036679247 592 dbSNP
rs1004311964 596 dbSNP
rs891035217 602 dbSNP
rs1312911435 606 dbSNP
rs892555643 614 dbSNP
rs370438917 615 dbSNP
rs1483270226 622 dbSNP
rs182369294 626 dbSNP
rs889341499 632 dbSNP
rs1438059178 637 dbSNP
rs1213190814 640 dbSNP
rs1331031729 642 dbSNP
rs1396120734 643 dbSNP
rs1268451139 659 dbSNP
rs1461189704 670 dbSNP
rs1182127209 675 dbSNP
rs1245548904 676 dbSNP
rs936069796 677 dbSNP
rs377020080 681 dbSNP
rs1232615549 689 dbSNP
rs1418120562 690 dbSNP
rs1050658344 691 dbSNP
rs930790993 692 dbSNP
rs1400558539 693 dbSNP
rs866146589 697 dbSNP
rs1334412844 698 dbSNP
rs972221893 699 dbSNP
rs940412219 700 dbSNP
rs992158609 710 dbSNP
rs1359882619 717 dbSNP
rs752140577 720 dbSNP
rs1220527944 726 dbSNP
rs958872393 729 dbSNP
rs1396727038 733 dbSNP
rs917010214 737 dbSNP
rs1202220962 745 dbSNP
rs992464308 752 dbSNP
rs1027841871 756 dbSNP
rs1215621768 759 dbSNP
rs138707332 759 dbSNP
rs1034256183 763 dbSNP
rs978736581 769 dbSNP
rs1015383633 787 dbSNP
rs1475531417 795 dbSNP
rs1479894463 796 dbSNP
rs1164604015 798 dbSNP
rs368923736 800 dbSNP
rs1174031245 801 dbSNP
rs968953955 816 dbSNP
rs553872284 827 dbSNP
rs1020079905 828 dbSNP
rs997187079 830 dbSNP
rs1460371230 835 dbSNP
rs534051407 841 dbSNP
rs1370739189 847 dbSNP
rs1345136840 848 dbSNP
rs145845686 857 dbSNP
rs1276981137 862 dbSNP
rs892524584 872 dbSNP
rs935870680 873 dbSNP
rs1282850943 879 dbSNP
rs1260427267 881 dbSNP
rs1186285005 882 dbSNP
rs1263218947 889 dbSNP
rs924696452 904 dbSNP
rs1465929621 906 dbSNP
rs574511660 912 dbSNP
rs1248435970 921 dbSNP
rs1019006425 941 dbSNP
rs1157745458 943 dbSNP
rs1332385423 948 dbSNP
rs1041786761 950 dbSNP
rs950046550 951 dbSNP
rs1159357409 955 dbSNP
rs374264047 959 dbSNP
rs1008834384 962 dbSNP
rs1325849473 967 dbSNP
rs917251107 974 dbSNP
rs1437583594 978 dbSNP
rs1441987865 987 dbSNP
rs991731841 988 dbSNP
rs758804853 994 dbSNP
rs1241423653 999 dbSNP
rs959192254 1000 dbSNP
rs920874883 1009 dbSNP
rs973558504 1018 dbSNP
rs889142108 1021 dbSNP
rs1451794925 1024 dbSNP
rs1180846799 1025 dbSNP
rs962241890 1027 dbSNP
rs1051107821 1029 dbSNP
rs1004385455 1030 dbSNP
rs1165044656 1040 dbSNP
rs955045089 1046 dbSNP
rs930947691 1069 dbSNP
rs1188182652 1071 dbSNP
rs1327308586 1081 dbSNP
rs899415598 1088 dbSNP
rs1249644361 1089 dbSNP
rs191160137 1093 dbSNP
rs1032930749 1094 dbSNP
rs1356648818 1094 dbSNP
rs999945125 1094 dbSNP
rs140793867 1095 dbSNP
rs1255939455 1108 dbSNP
rs368891066 1109 dbSNP
rs1179022509 1120 dbSNP
rs1242504909 1121 dbSNP
rs1421965490 1127 dbSNP
rs551641998 1128 dbSNP
rs1369091779 1140 dbSNP
rs1449723115 1155 dbSNP
rs950195954 1156 dbSNP
rs1168870805 1157 dbSNP
rs1402722955 1160 dbSNP
rs895923369 1161 dbSNP
rs765692536 1164 dbSNP
rs1056185142 1165 dbSNP
rs774886607 1166 dbSNP
rs1272616989 1167 dbSNP
rs1314252703 1168 dbSNP
rs1340490729 1168 dbSNP
rs879209153 1172 dbSNP
rs1226045838 1175 dbSNP
rs1230760876 1176 dbSNP
rs937356876 1177 dbSNP
rs920842207 1178 dbSNP
rs992607689 1178 dbSNP
rs397736236 1179 dbSNP
rs57260612 1179 dbSNP
rs936983709 1179 dbSNP
rs1303019643 1180 dbSNP
rs1428062630 1180 dbSNP
rs1426106180 1181 dbSNP
rs940812573 1183 dbSNP
rs150839836 1185 dbSNP
rs529657608 1185 dbSNP
rs538922789 1185 dbSNP
rs908061168 1185 dbSNP
rs987682994 1185 dbSNP
rs926985820 1187 dbSNP
rs1342014833 1188 dbSNP
rs1218819118 1193 dbSNP
rs955287560 1197 dbSNP
rs1324552849 1202 dbSNP
rs1310278047 1203 dbSNP
rs1029449089 1204 dbSNP
rs375145404 1210 dbSNP
rs968632692 1216 dbSNP
rs1485490399 1219 dbSNP
rs150928353 1220 dbSNP
rs1265375751 1221 dbSNP
rs988640050 1230 dbSNP
rs1032856980 1239 dbSNP
rs566040644 1240 dbSNP
rs547900846 1261 dbSNP
rs1265523967 1262 dbSNP
rs1018970328 1271 dbSNP
rs1177209270 1272 dbSNP
rs1363780460 1275 dbSNP
rs1000081978 1278 dbSNP
rs529258789 1281 dbSNP
rs552443869 1282 dbSNP
rs1400244347 1293 dbSNP
rs1172632635 1295 dbSNP
rs1292651009 1302 dbSNP
rs953373917 1303 dbSNP
rs1388348283 1304 dbSNP
rs1301657694 1308 dbSNP
rs1028955182 1311 dbSNP
rs568081683 1313 dbSNP
rs1316298007 1314 dbSNP
rs549782458 1326 dbSNP
rs1014115938 1327 dbSNP
rs1288264067 1327 dbSNP
rs1428787477 1328 dbSNP
rs895878992 1334 dbSNP
rs995254071 1336 dbSNP
rs1418260783 1340 dbSNP
rs1489577984 1341 dbSNP
rs374789385 1341 dbSNP
rs754089348 1343 dbSNP
rs115277542 1344 dbSNP
rs1438389989 1347 dbSNP
rs1279611552 1353 dbSNP
rs1180990427 1358 dbSNP
rs1005041958 1367 dbSNP
rs532344307 1370 dbSNP
rs1056900159 1371 dbSNP
rs899179791 1374 dbSNP
rs116141670 1377 dbSNP
rs545669841 1387 dbSNP
rs1293897817 1392 dbSNP
rs908149422 1395 dbSNP
rs1042702310 1397 dbSNP
rs186722675 1398 dbSNP
rs933543452 1398 dbSNP
rs760708712 1401 dbSNP
rs1227864953 1408 dbSNP
rs1290824700 1409 dbSNP
rs566669114 1411 dbSNP
rs1222500899 1412 dbSNP
rs1410909888 1419 dbSNP
rs963652201 1421 dbSNP
rs1311695550 1423 dbSNP
rs1412437100 1425 dbSNP
rs913131731 1426 dbSNP
rs774364495 1432 dbSNP
rs1180805800 1434 dbSNP
rs967252715 1436 dbSNP
rs775429143 1440 dbSNP
rs1172782917 1447 dbSNP
rs1165110553 1449 dbSNP
rs1399087109 1450 dbSNP
rs965174298 1453 dbSNP
rs1333096248 1454 dbSNP
rs1400974404 1455 dbSNP
rs912433048 1465 dbSNP
rs576163083 1467 dbSNP
rs1282506348 1470 dbSNP
rs1014499978 1472 dbSNP
rs1381357145 1482 dbSNP
rs1228951694 1487 dbSNP
rs566624757 1488 dbSNP
rs762737840 1489 dbSNP
rs1220871624 1491 dbSNP
rs1259063764 1502 dbSNP
rs775326490 1507 dbSNP
rs1001638791 1509 dbSNP
rs994823755 1518 dbSNP
rs1472843169 1521 dbSNP
rs547128126 1540 dbSNP
rs530177937 1541 dbSNP
rs574607727 1549 dbSNP
rs1413852900 1551 dbSNP
rs922114109 1551 dbSNP
rs1332181274 1553 dbSNP
rs896073377 1554 dbSNP
rs1360826240 1559 dbSNP
rs556149569 1567 dbSNP
rs770499458 1572 dbSNP
rs1001718898 1573 dbSNP
rs1220625105 1574 dbSNP
rs1444171279 1576 dbSNP
rs544236330 1577 dbSNP
rs1217828300 1578 dbSNP
rs905590652 1581 dbSNP
rs1043224308 1584 dbSNP
rs142534520 1587 dbSNP
rs1039403369 1607 dbSNP
rs1270351829 1610 dbSNP
rs942434989 1619 dbSNP
rs558478461 1621 dbSNP
rs1477615005 1633 dbSNP
rs978387495 1635 dbSNP
rs1355342005 1637 dbSNP
rs1414927648 1639 dbSNP
rs1427205539 1639 dbSNP
rs1158123879 1640 dbSNP
rs1358640029 1646 dbSNP
rs1052961826 1647 dbSNP
rs1445242699 1648 dbSNP
rs1291577061 1653 dbSNP
rs778348931 1654 dbSNP
rs539626358 1661 dbSNP
rs1434826034 1663 dbSNP
rs1276927274 1664 dbSNP
rs550934284 1665 dbSNP
rs1334474146 1670 dbSNP
rs566299737 1675 dbSNP
rs1399692479 1679 dbSNP
rs377718781 1679 dbSNP
rs992765223 1680 dbSNP
rs1350948318 1682 dbSNP
rs1218163040 1692 dbSNP
rs985231244 1700 dbSNP
rs932494056 1710 dbSNP
rs1196515882 1713 dbSNP
rs1034169420 1714 dbSNP
rs115860437 1715 dbSNP
rs1178003107 1725 dbSNP
rs1417130932 1728 dbSNP
rs1161370078 1729 dbSNP
rs1421637752 1733 dbSNP
rs973930262 1738 dbSNP
rs753241273 1758 dbSNP
rs535526357 1759 dbSNP
rs1325949933 1763 dbSNP
rs1015299793 1764 dbSNP
rs1192762719 1768 dbSNP
rs1446497769 1768 dbSNP
rs1379725665 1783 dbSNP
rs963451041 1785 dbSNP
rs1279589219 1788 dbSNP
rs1355211204 1790 dbSNP
rs1207635497 1792 dbSNP
rs1291562101 1795 dbSNP
rs1468800446 1796 dbSNP
rs1197744422 1798 dbSNP
rs1463672001 1801 dbSNP
rs1441415095 1803 dbSNP
rs983459462 1803 dbSNP
rs1182663675 1805 dbSNP
rs79999593 1809 dbSNP
rs1035966648 1817 dbSNP
rs1001686157 1822 dbSNP
rs1165282802 1825 dbSNP
rs759064798 1825 dbSNP
rs1391723009 1827 dbSNP
rs774025112 1829 dbSNP
rs1160041492 1836 dbSNP
rs1329701932 1843 dbSNP
rs113770490 1855 dbSNP
rs549720591 1857 dbSNP
rs1328958750 1858 dbSNP
rs1470391458 1860 dbSNP
rs1339421586 1865 dbSNP
rs1241977464 1889 dbSNP
rs1285634696 1893 dbSNP
rs1335049842 1906 dbSNP
rs866900193 1909 dbSNP
rs1039164751 1912 dbSNP
rs1284218228 1914 dbSNP
rs879920223 1915 dbSNP
rs925699966 1915 dbSNP
rs11819015 1916 dbSNP
rs1255369876 1920 dbSNP
rs35172525 1927 dbSNP
rs570652412 1937 dbSNP
rs552473081 1944 dbSNP
rs1011778967 1945 dbSNP
rs754142614 1949 dbSNP
rs891543964 1952 dbSNP
rs1477591738 1955 dbSNP
rs1052683792 1965 dbSNP
rs1435607789 1972 dbSNP
rs1349086272 1973 dbSNP
rs1426151345 1978 dbSNP
rs1302838970 1987 dbSNP
rs1400651441 1987 dbSNP
rs1462800679 1987 dbSNP
rs1321511866 1991 dbSNP
rs1335560451 1996 dbSNP
rs943719307 2001 dbSNP
rs1406960223 2002 dbSNP
rs891018147 2009 dbSNP
rs992929212 2011 dbSNP
rs959974390 2014 dbSNP
rs1049655582 2022 dbSNP
rs527477671 2028 dbSNP
rs919794383 2029 dbSNP
rs1258228279 2043 dbSNP
rs560259187 2048 dbSNP
rs1488092415 2049 dbSNP
rs376547670 2055 dbSNP
rs979930020 2056 dbSNP
rs1447696910 2058 dbSNP
rs879850583 2070 dbSNP
rs1189436501 2072 dbSNP
rs1175771219 2074 dbSNP
rs541663462 2078 dbSNP
rs1376453094 2088 dbSNP
rs1468373922 2091 dbSNP
rs111499834 2094 dbSNP
rs1245283325 2094 dbSNP
rs760818751 2102 dbSNP
rs1174982071 2103 dbSNP
rs973935893 2104 dbSNP
rs529774792 2108 dbSNP
rs1224451844 2109 dbSNP
rs1296036522 2113 dbSNP
rs532984995 2118 dbSNP
rs942076224 2119 dbSNP
rs1382624448 2120 dbSNP
rs1300279484 2122 dbSNP
rs1329306291 2126 dbSNP
rs545246838 2127 dbSNP
rs1280935987 2131 dbSNP
rs983429938 2137 dbSNP
rs544224588 2138 dbSNP
rs1227086845 2146 dbSNP
rs1035932486 2151 dbSNP
rs767626089 2157 dbSNP
rs1435440973 2159 dbSNP
rs997954607 2165 dbSNP
rs900745286 2166 dbSNP
rs1438586353 2167 dbSNP
rs970246813 2169 dbSNP
rs1017849618 2178 dbSNP
rs576944948 2182 dbSNP
rs558154985 2184 dbSNP
rs904036501 2185 dbSNP
rs1388378845 2191 dbSNP
rs1272807182 2192 dbSNP
rs891510033 2198 dbSNP
rs1304116305 2205 dbSNP
rs1042757057 2210 dbSNP
rs1376032006 2212 dbSNP
rs1031401765 2217 dbSNP
rs1238085521 2226 dbSNP
rs1007829896 2230 dbSNP
rs1307310002 2240 dbSNP
rs1317747205 2242 dbSNP
rs890819004 2243 dbSNP
rs1263890190 2249 dbSNP
rs546444752 2251 dbSNP
rs1214673048 2255 dbSNP
rs1372476896 2255 dbSNP
rs1169476404 2259 dbSNP
rs573109636 2263 dbSNP
rs898420476 2264 dbSNP
rs1176277989 2266 dbSNP
rs1423539020 2270 dbSNP
rs1419136415 2273 dbSNP
rs1193247577 2279 dbSNP
rs762930852 2285 dbSNP
rs941815759 2286 dbSNP
rs1399498579 2292 dbSNP
rs909065800 2294 dbSNP
rs1203616070 2302 dbSNP
rs1374222528 2303 dbSNP
rs939890222 2309 dbSNP
rs1310899137 2312 dbSNP
rs907944021 2314 dbSNP
rs1276080325 2316 dbSNP
rs1205454312 2317 dbSNP
rs1376034508 2320 dbSNP
rs1030865056 2321 dbSNP
rs775377758 2323 dbSNP
rs1233959440 2330 dbSNP
rs964682279 2333 dbSNP
rs1017776244 2338 dbSNP
rs1220783539 2339 dbSNP
rs1368021368 2340 dbSNP
rs1001083670 2342 dbSNP
rs1464511764 2343 dbSNP
rs1165382122 2346 dbSNP
rs572674153 2348 dbSNP
rs554292879 2353 dbSNP
rs769611906 2357 dbSNP
rs759280012 2359 dbSNP
rs1407851640 2365 dbSNP
rs980128267 2366 dbSNP
rs1447457250 2367 dbSNP
rs1301118701 2377 dbSNP
rs1308665471 2378 dbSNP
rs371855991 2392 dbSNP
rs1357641498 2396 dbSNP
rs1057287474 2409 dbSNP
rs1277982636 2412 dbSNP
rs1316511240 2413 dbSNP
rs1216658033 2415 dbSNP
rs1274377973 2417 dbSNP
rs1357687102 2420 dbSNP
rs1178479019 2424 dbSNP
rs1208854258 2424 dbSNP
rs535660832 2441 dbSNP
rs938327677 2450 dbSNP
rs1411684831 2455 dbSNP
rs1262017180 2456 dbSNP
rs970679973 2464 dbSNP
rs1188024515 2466 dbSNP
rs914839916 2472 dbSNP
rs1473829795 2476 dbSNP
rs148891316 2477 dbSNP
rs868547557 2478 dbSNP
rs1435409534 2480 dbSNP
rs956231695 2488 dbSNP
rs1338678323 2491 dbSNP
rs1482629588 2493 dbSNP
rs1031369154 2495 dbSNP
rs983296250 2496 dbSNP
rs1271095330 2499 dbSNP
rs35999266 2506 dbSNP
rs71488814 2506 dbSNP
rs1007965812 2507 dbSNP
rs559484390 2508 dbSNP
rs1283071459 2510 dbSNP
rs1312558160 2514 dbSNP
rs955129089 2516 dbSNP
rs1210942360 2524 dbSNP
rs556285284 2525 dbSNP
rs976578416 2526 dbSNP
rs996539191 2527 dbSNP
rs1331088856 2529 dbSNP
rs964652608 2533 dbSNP
rs1477667225 2537 dbSNP
rs537826175 2538 dbSNP
rs1396773061 2560 dbSNP
rs1454799243 2561 dbSNP
rs898385557 2564 dbSNP
rs1158070001 2567 dbSNP
rs1038316812 2572 dbSNP
rs910569819 2573 dbSNP
rs1319403381 2576 dbSNP
rs539975651 2578 dbSNP
rs1434756105 2579 dbSNP
rs746669847 2581 dbSNP
rs574452259 2582 dbSNP
rs777205512 2583 dbSNP
rs1372337803 2585 dbSNP
rs1021667205 2596 dbSNP
rs552303988 2597 dbSNP
rs1377051565 2598 dbSNP
rs1304880590 2608 dbSNP
rs1284506987 2610 dbSNP
rs1332433795 2612 dbSNP
rs771685797 2614 dbSNP
rs886977312 2615 dbSNP
rs1047838486 2617 dbSNP
rs1448947048 2618 dbSNP
rs961168406 2619 dbSNP
rs878934123 2624 dbSNP
rs1178103822 2629 dbSNP
rs748703051 2630 dbSNP
rs938708473 2635 dbSNP
rs1471192420 2638 dbSNP
rs1035416402 2639 dbSNP
rs1002643149 2641 dbSNP
rs928710122 2642 dbSNP
rs1044070639 2645 dbSNP
rs1005923000 2650 dbSNP
rs887690776 2651 dbSNP
rs777704599 2655 dbSNP
rs1164670106 2656 dbSNP
rs1044759195 2657 dbSNP
rs146759929 2659 dbSNP
rs929118819 2660 dbSNP
rs923109281 2674 dbSNP
rs914789670 2675 dbSNP
rs755412972 2680 dbSNP
rs1197995467 2684 dbSNP
rs910672790 2686 dbSNP
rs1248322352 2694 dbSNP
rs979401276 2698 dbSNP
rs143343171 2700 dbSNP
rs748071196 2701 dbSNP
rs914124706 2704 dbSNP
rs1418960147 2705 dbSNP
rs548395513 2709 dbSNP
rs780323213 2710 dbSNP
rs1399227390 2712 dbSNP
rs960882892 2715 dbSNP
rs1328897089 2722 dbSNP
rs1412474490 2726 dbSNP
rs529962729 2727 dbSNP
rs756353786 2735 dbSNP
rs1294728416 2737 dbSNP
rs1335310630 2741 dbSNP
rs986938141 2742 dbSNP
rs537839557 2745 dbSNP
rs778956655 2745 dbSNP
rs1341327646 2746 dbSNP
rs955098051 2747 dbSNP
rs575497838 2753 dbSNP
rs1277923766 2757 dbSNP
rs1028091648 2774 dbSNP
rs180800780 2775 dbSNP
rs550731918 2776 dbSNP
rs1005850968 2779 dbSNP
rs145515637 2787 dbSNP
rs75428609 2787 dbSNP
rs1364781890 2790 dbSNP
rs1318757545 2792 dbSNP
rs1462883698 2792 dbSNP
rs1374379834 2807 dbSNP
rs1017259735 2824 dbSNP
rs1432320292 2824 dbSNP
rs1314373880 2836 dbSNP
rs1004173659 2839 dbSNP
rs1437793431 2840 dbSNP
rs139932006 2841 dbSNP
rs1293127041 2843 dbSNP
rs566690664 2846 dbSNP
rs1389833490 2848 dbSNP
rs1293461071 2849 dbSNP
rs1456784842 2863 dbSNP
rs1345905263 2865 dbSNP
rs1213076710 2868 dbSNP
rs1281330308 2869 dbSNP
rs1047609742 2873 dbSNP
rs1056274714 2874 dbSNP
rs1376546072 2889 dbSNP
rs1444686993 2893 dbSNP
rs539848841 2895 dbSNP
rs907261301 2898 dbSNP
rs572656405 2906 dbSNP
rs146008714 2912 dbSNP
rs150005724 2913 dbSNP
rs1452522487 2918 dbSNP
rs757289770 2918 dbSNP
rs1286916366 2921 dbSNP
rs777350273 2922 dbSNP
rs1382571915 2926 dbSNP
rs879527761 2926 dbSNP
rs1267109049 2930 dbSNP
rs1368676128 2933 dbSNP
rs1236620932 2936 dbSNP
rs779620695 2936 dbSNP
rs191139166 2937 dbSNP
rs1237225461 2941 dbSNP
rs1262706574 2942 dbSNP
rs1486420075 2947 dbSNP
rs946690051 2952 dbSNP
rs1251706337 2958 dbSNP
rs186344735 2959 dbSNP
rs934187035 2960 dbSNP
rs1395101129 2962 dbSNP
rs921001139 2967 dbSNP
rs975226808 2972 dbSNP
rs1365153654 2973 dbSNP
rs1454168096 2975 dbSNP
rs556223905 2978 dbSNP
rs1392204024 2983 dbSNP
rs181952023 2985 dbSNP
rs139328415 2990 dbSNP
rs558872041 2995 dbSNP
rs1389711099 2996 dbSNP
rs980932187 3002 dbSNP
rs1179526359 3004 dbSNP
rs1393569814 3007 dbSNP
rs982450567 3013 dbSNP
rs765102884 3014 dbSNP
rs1271589132 3015 dbSNP
rs1337602832 3016 dbSNP
rs1214926408 3023 dbSNP
rs1238102190 3024 dbSNP
rs374511797 3025 dbSNP
rs1424813764 3026 dbSNP
rs533980265 3027 dbSNP
rs984549537 3036 dbSNP
rs1163961077 3039 dbSNP
rs1450884472 3039 dbSNP
rs566755716 3044 dbSNP
rs1165611178 3045 dbSNP
rs114148701 3046 dbSNP
rs1460547959 3048 dbSNP
rs536437534 3059 dbSNP
rs1431206938 3069 dbSNP
rs1269444041 3073 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 6585.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065668. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggguggucgacgagggACCGGGu 5'
                          |||||| 
Target 5' -------------acaUGGCCCa 3'
1 - 10
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065668
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_7
Location of target site ENST00000266058.4 | 3UTR | ACAUGGCCCAGCCUCCUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
87 hsa-miR-4640-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT100106 ABT1 activator of basal transcription 1 2 8
MIRT248144 LMBR1L limb development membrane protein 1 like 2 2
MIRT327062 KLHL15 kelch like family member 15 2 2
MIRT347231 GATAD2A GATA zinc finger domain containing 2A 2 2
MIRT450221 CENPN centromere protein N 2 2
MIRT451264 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT452701 C1orf226 chromosome 1 open reading frame 226 2 2
MIRT453212 CERS1 ceramide synthase 1 2 2
MIRT454822 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT454883 RAD50 RAD50 double strand break repair protein 2 2
MIRT455783 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT455858 TMEM254 transmembrane protein 254 2 2
MIRT457615 UPK3BL uroplakin 3B like 1 2 2
MIRT457822 ITPRIP inositol 1,4,5-trisphosphate receptor interacting protein 2 4
MIRT458344 NOC2L NOC2 like nucleolar associated transcriptional repressor 2 2
MIRT458376 ITM2C integral membrane protein 2C 2 2
MIRT458928 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459066 WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 2 2
MIRT460138 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460818 FSTL4 follistatin like 4 2 2
MIRT461285 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 2 2
MIRT462738 EFNB1 ephrin B1 2 2
MIRT464556 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT477910 DUSP2 dual specificity phosphatase 2 2 2
MIRT479073 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 4
MIRT479534 CDC5L cell division cycle 5 like 2 4
MIRT485628 EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 2 2
MIRT489896 PPIC peptidylprolyl isomerase C 2 4
MIRT490737 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT491201 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT492681 PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein 2 2
MIRT494593 ATG7 autophagy related 7 2 2
MIRT495061 PADI3 peptidyl arginine deiminase 3 2 4
MIRT496623 TMEM67 transmembrane protein 67 2 2
MIRT497177 ZBTB40 zinc finger and BTB domain containing 40 2 2
MIRT498217 TLN2 talin 2 2 2
MIRT498306 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT499668 NPHP3 nephrocystin 3 2 2
MIRT508080 ANKRD52 ankyrin repeat domain 52 2 2
MIRT509707 ANKRD23 ankyrin repeat domain 23 2 2
MIRT509841 FOS Fos proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT512814 ARRDC2 arrestin domain containing 2 2 2
MIRT513353 SLIT1 slit guidance ligand 1 2 2
MIRT514293 FXYD5 FXYD domain containing ion transport regulator 5 2 2
MIRT516598 FAM89A family with sequence similarity 89 member A 2 4
MIRT516616 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT518348 CCL5 C-C motif chemokine ligand 5 2 2
MIRT520130 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT522072 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT526461 OSBPL5 oxysterol binding protein like 5 2 2
MIRT528278 MBL2 mannose binding lectin 2 2 2
MIRT534844 RAB15 RAB15, member RAS oncogene family 2 4
MIRT542245 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT543299 ZNF585B zinc finger protein 585B 2 2
MIRT552456 ZNF410 zinc finger protein 410 2 2
MIRT553641 TJAP1 tight junction associated protein 1 2 2
MIRT557103 HOXA3 homeobox A3 2 2
MIRT570782 FANCA Fanconi anemia complementation group A 2 2
MIRT630912 ZMAT2 zinc finger matrin-type 2 2 2
MIRT631034 ZNF878 zinc finger protein 878 2 2
MIRT639017 AAK1 AP2 associated kinase 1 2 2
MIRT648596 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT648939 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT652834 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT659347 CSRP1 cysteine and glycine rich protein 1 2 2
MIRT664163 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT670511 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT671246 TMEM41B transmembrane protein 41B 2 2
MIRT672120 ATP6V0A2 ATPase H+ transporting V0 subunit a2 2 2
MIRT672313 CD3D CD3d molecule 2 2
MIRT672543 BRMS1L breast cancer metastasis-suppressor 1 like 2 2
MIRT673036 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT673814 DARS aspartyl-tRNA synthetase 2 2
MIRT674858 GINM1 glycoprotein integral membrane 1 2 2
MIRT674970 SH3BP2 SH3 domain binding protein 2 2 2
MIRT675185 KIF1C kinesin family member 1C 2 2
MIRT675219 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT675558 MED16 mediator complex subunit 16 2 2
MIRT682566 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT684640 PDE4C phosphodiesterase 4C 2 2
MIRT689722 ATXN2 ataxin 2 2 2
MIRT693594 SLC39A1 solute carrier family 39 member 1 2 2
MIRT704745 CDKN2B cyclin dependent kinase inhibitor 2B 2 2
MIRT712779 ZNF154 zinc finger protein 154 2 2
MIRT718118 OTOF otoferlin 2 2
MIRT720115 SAMD4A sterile alpha motif domain containing 4A 2 2
MIRT720275 EIF1AD eukaryotic translation initiation factor 1A domain containing 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4640 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-mir-4640 Fluorouracil 3385 NSC19893 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-mir-4640 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4640-5p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4640-5p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4640-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-4640-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4640-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4640-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4640-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4640-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4640-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-4640-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4640-5p Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)

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