miRTarBase - #MIRT513377


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pre-miRNA Information
pre-miRNA hsa-mir-3622a   
Genomic Coordinates chr8: 27701677 - 27701759
Description Homo sapiens miR-3622a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3622a-5p
Sequence 14| CAGGCACGGGAGCUCAGGUGAG |35
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 2 8 + 27701691 29233923 MiREDiBase
A-to-I 6 8 + 27701695 29233923 MiREDiBase
A-to-I 16 8 + 27701705 28550310, 29233923 MiREDiBase
A-to-I 21 8 + 27701710 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551845360 1 dbSNP
rs946438979 3 dbSNP
rs1044808718 7 dbSNP
rs66683138 8 dbSNP
rs1157333896 10 dbSNP
rs1439657384 12 dbSNP
rs530939348 17 dbSNP
rs1232922758 20 dbSNP
rs1448152954 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MGAT4A   
Synonyms GNT-IV, GNT-IVA, GnT-4a
Description mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
Transcript NM_012214   
Other Transcripts NM_001160154   
Expression
Putative miRNA Targets on MGAT4A
3'UTR of MGAT4A
(miRNA target sites are highlighted)		 
>MGAT4A|NM_012214|3'UTR
   1 TCATCTGAGAAACCAACACATTTTTTCCTGTGAATTTGTTAATTAAAGATAGTTAAGCATGTATCTTTTTTTTATTTCTA
  81 CTTGAACACTACCTCTTGTGAAGTCTACTGTAGATAAGACGATTGTCATTTCCACTTGGAAAGTGAATCTCCCATAATAA
 161 TTGTATTTGTTTGAAACTAAGCTGTCCTCAGATTTTAACTTGACTCAAACATTTTTCAATTATGACAGCCTGTTAATATG
 241 ACTTGTACTATTTTGGTATTATACTAATACATAAGAGTTGTACATATTGTTACATTCTTTAAATTTGAGAAAAACTAATG
 321 TTACATACATTTTATGAAGGGGGTACTTTTGAGGTTCACTTATTTTACTATTATAGACCCTCTTTTATAGATTATCAGGG
 401 ATTATATATATAAATATATAAATATACATAAAAATGTTATGGAATTAATTTATTAGAAACACTTAAGAAGTACATATTTT
 481 TGTGCAGTAGATTTTTGAATCGATACTTTTTTTGAAAACCAGTTTCCTTGCTTTTTTAAGTTCTTTCTATATTTTTCTTT
 561 GGAAATGCAAACATTACAAACCAATGCCATTTTTCAAATGCACTGCCATTTAAGATTGATTATAGATGGATTTCTTAATT
 641 GAAGTACTTTTATAATCACAGTGACTGAACAAAATATTTTCAAAGACATTTGTCATTCCTTAAAGCCAAGATTTTAAAGA
 721 CTAATGTCCTTCCTGAGGGTTACTTTACTATACTGTGTATGGTGTATAGCCACAGAAAGTCAGTCTGATAAATTTTCAAT
 801 GTGTAAGTGTGATGCATTCAACCCAGATTATTGTAGACTTAACTTATTATATTTCCTCTGATATGTAAAATGACAAACTC
 881 TTCTTTCCTTTTTAATCTTTGTCTTTAATCCATGAATTAGGTGCATTATCTGCTGTTGATTCTTTTATATCTGCACTCAT
 961 TTTATGACGTCAGACAAAATGTTTTCTAGGTGTTGCTATTGTATGAGTCATAATTGGTATAATTTTAAAGAAAATTGTAA
1041 TATTGTTTTTTGGTGAAATATATTATTAGTAGTATATTTTCCAAAATGATTTTATTGTAGTATGAACTGATAAGTGAGTC
1121 CCGTGTCCAAGAGACTGTATTTATTACTCTTAAACACGCTATTCCAAATGATATTACTACTATAAACAAAGAATATTACC
1201 GGTCTCAGCAATCAGTGATCTTTATAAAAGTACTTTTAAAAAATGATGAATTATCACCAGGCGCTGTGGCTCACGCCTGT
1281 AATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAAC
1361 CCTGTCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGG
1441 CAGGAGAATGGCGTGAACCCAGGAGGCAGAGCTGGCAGTGAGCTGAGATCGCACCACTGCACTCCAGCCTGGGCGACACA
1521 GCTAGACTCCGTCTCAAAAAAAAAAAAAGATGAAGTATCAACATCAGTTCCCAGCCAGTCTGCTTGGACACACTGGGGTG
1601 CCACAAGTGGGTTGCAGGTTGGTTGCAGACGGGCAGAGATGGATTCTGCTGAGCTTTCAGAGTGACCACTGGCTGGGGCC
1681 TAGCGCTGGGGCAAGGTTCCAGCTGGCTGCCTCTAGCCTGGAGGAGCTTCATCTAGTTACCCAATGTGCTGAACCAACAG
1761 CATGAAATAGCATCATTTCCTGTGCTGTGTTACAAAGTGCAAACGTTTGGAAACACTGATACAGTACAATTATTTCCATC
1841 ACTCCATGTTGTTATAATTTTTAGTTACTTTTCTTGATTGAAAAGTCAATCACATTGCCAAAAATGATTTTTATGTCAGT
1921 TAAAGGCCAGTTGAAATTTTTTTATTAGGATGTTTTAAATTTACTTTTCACTTTCTTGAATTTTTTTCTTCTCAAATTTC
2001 CTTGGCCCAGTGCCCATGAGCAAATTTCATTCAAAAACAGGAATAACCTTTTGTCATAAAATTTTGGCACCAGCTTGGTA
2081 TACTAAATTACTGCAAAGATAACTGAGTACCAGAAGTAAAAATCTCTGCAGGTGGGCTTAGGAGTACTCTTGGGTCCCTG
2161 GTTCCTCAGTTGCCAACTCTGGTTTCATGAAGAAAGACCATGCTCTGAAAATCTAGGGAGGAGAAAGTTATTGCAGCACC
2241 TGGTGTGATTTGTTACAACTTCTTTAAAGACAGCCTGCCTGGCTAGCTTTTTCCTGTTTTCATGCAGTTTGCCCTCCCAG
2321 CATTGGTCCACCTGTTGTTCCCAAGAAACTCATTCTTGTTCCCAAGACTCCTTTTAGCCAAATCTTTCCTATCATTCCAG
2401 GACTTTTTTGTGCTTCTCTCCCCATGAATCTACCCGTGCCTAGGGTGTGTGCCAGGCACGTGGCAGGTGGCCAGTCAGCA
2481 TCTGGATGTGAGACCAATTATTCCAGCCTGCCCTCCTCTTTCTCTTTTTATCATTTTGTATTATTTTTGAGACAGGGTCT
2561 CGCTTTGTTGCCCAGGCTGGAGTGCAGTGGTGCTCTCATAGCTCACTGCAGCCTCGATCTCTGGCCTCAAGCAATCCTCC
2641 TGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGTGTGTGCCACCATGTCCAGCCCCCTTTCTCTCTCTTAACTCCCTCTC
2721 CCTGCTGTCGTTGCCATACTCTTGCATACACAATCGGTTGTCTAGTTTTTGATTGTTTGTGTGTATGGTGTGTGCTGTCT
2801 CTCTGACCAGATTTCAGGTTCCTGAGGCGAGCCTGCAGCTCATACTGCTCATCTGTCCTCTCCTATGGTGGGTGCTCAGG
2881 GCCTCTCACTGTTAGTTACTCCCTCCTTTCTGCCCAGTTCTGCACTCAACTAGTAGAAGCAGCCATCCTTTCCCCAAGCA
2961 GGAAATTGTAGTGGTCGCCCTTAAGAGCAGTGTGAGGGCAGAAGATTAAGGGAGGGGAAGAGTCCCTGGAACTGGAAGAA
3041 GGTAAATACTTTGCCTTGAGAGGGCGCCGAATCATTTTACCAAAATAGTAAATGGAAAAAGTGTCAAAGGTTGGGACTAG
3121 TTTTAAAAACACATATAGCCAGTAGACACATGGGGGCTGTTTAAATAAAAACATTTTTTTACCCGGTTCTGCCATCACAC
3201 ACACTAGTGACATTCCAAGTACTCAGTGGCCATGTGGAGCTAGTGGCCACCACACTTGACACCACGGATGCAGAACTTTT
3281 CCATCACTGCAGAAAGCTCTGTTGAACAGTACTGTGTCCAGAGTGCTAATTATGAACAGCTTAGAAACCACAATTAATAC
3361 ATTCTCATGAGGTTAAAAGCAGACATGGGAATAGAACATAATGCAAATGATGATGAATATTTTGGGTGAGAAGAGAAAGC
3441 TGAGGACCCATTTCTAGGATTCTAAGATGTAAGATTTCTTAAGTTCTTTATCTTAGTCTCATGCATTCTCCACATCACGC
3521 GCTGTACCATACTGTGTAGTCAGAACAGACAGTGTGATTGAAAAGCTTTGGAAAAAGTTAACACAAAGGATTATTTAGCA
3601 CATAGGCTGTAGATACGTATGTGTGTATTTGTTCAACAATTGGAGATGGTTGAATACCCTTGAACAAAGTGTGTATCTTC
3681 TCAAATCAGTGGTTGCACTAGTCAATAATTAGAAGGTGTTGTTATTTTTAAAACTATAAGCAAAATTATGAAGGCCTTTA
3761 AAAAATCTATCATAATAATGAAAAAGAGGTTGTCTCCCAACAGTGCTGTCCCTCAAAGAAAAGACTGGTTATGTGGAAAC
3841 AGCACGTTTGGAGAGATTATTCTAGTGAATAACAGTGTATATTTGTGGTAGGCAAATTTCTAAGAATGACCCCTACTGAC
3921 ACCCCCACCAATGACCTTGTATAATATCCTCCCACTTTGAGCATGGGTGGAACCTGTTTGATCCATGATTATATCATGTT
4001 ATGTAGCAAAAGGAAGACTGTCTGGGGGTGGCTAATCAAATCTTGTGACTCCTTTAAAAGCAGAGAGTTTTCTCGGGCTG
4081 GTGGCAGAAGTCAAGAGACAAAGCAGAAGGACCTCAGGCACCATTGCTGTTTTAAGGTAGAGGGGGCTGCATGAGAAGGA
4161 ATGCACATGGCTTTGAGGAGCTGAGAGAGGCCTTGGCTAACAGCAAAGGAGCTGGGAACTGCAGTCCTACAGCCACGGGA
4241 ACTGAATTCAGCCCATAAGCTCATTCATAGGCTTGGAAAGGCATTCATCTCCAGTCTCCAGATAAGACCCAGCCTGGCCA
4321 ACACTTTGAATCCAGCCTTGTGAGACCCTAAGCCGAGAACTCACTTAAGCCTGCTTGGACTTCTGACCTACAGAACTATG
4401 AGATAATAAATCAGTGGTGTTTTAAGCTGCTAAATTTGTGGCAATTTGTTATGTAGGAATAGGAAATGAATACAGTATTT
4481 TAAAAGAGGTAAAGAGGAAATCTTCATACTTGATTCCCTGTAGTATGCTGGATATTTCTTGGTAAATGCATGAATAAAGT
4561 CTTTAGTAGCAAGTCATGTACCTGGACCTTGTTGGGGATGTTCTCGCCAGAGATCTCAATTAGTCTTCATTGGACGTTTG
4641 TTGGCAAAGTTGCAGCATCTTACTGAGTAGCGTTTGGTAAAGGAACTGCTAGAATGAGACTATAGGAATAGGACTGAAAC
4721 AGTGTGTAAGGGATCTTTTTTATTTCTAGAAGAGGTGTTACTTTATACTGATTTAGACTGCTCTGAGCCTGTCAGAAGTA
4801 AATTCAAGAATGATTAACAGTGGTATTTTAGATACATTAAGAGCAAAAATAACCTTTGCCTTGTAGAGATCAGATAATCT
4881 GTGTATCGAGGGATTTAATTTTTTTTAACCAAAACTTAGTTTCTCTTTTTATCATCTAGCACAGATCAAATCCTGTATGG
4961 GCCAGCCAAATGTTTGTAGTTTGAGAATGTTTTGCAAATACCTCTCTGCTTCCAAGCCATTAATAGCTAATGAAGTTTTA
5041 TTTTGGTTTGTCCATTAATTTTTCTGCTTATTTTTACTGTATTGCCATGTCCTTGATACGAGACAAGTAGAACTAAAAGA
5121 GAGAAAATGAGAGGTTAAGACTGTCAGAAGATGAGAAATGTGAGTCATAACCATACCTTAGTGTTTTAAGGGAACTTTAT
5201 CCAGTCCAATCCCTTTATAGAAAAGGAACTTTTCCAAGTTATGTTGCAGTATTTATAGTGTGTAAAATTTTGTTTGACTT
5281 TGGTAGTTGTGCATTTTAAATTATGAATCTTATATGCTACGATAACTAGTATGCTTACTTTCTTTAATGCATGTGATCAT
5361 ACAATGCTAAAAAGGTATTTTTTAAAGACCCAACCAAACTGAGGATTTTGTTATACATATCTGTATCAACACCTATATAT
5441 AAACTCTTCTTCTTACCTGAAACACTCCTTCACCCGGTTTGGGCACTAACTAGATCATTTTCAAAGGAACAAACAGGAAG
5521 GAGCAAGCTGGCACTCCAGGGTGCATCTGAGCTGAGAATTTAGAAGACCTCATTCAAGAAAGTAAACTGAGCATTGATGG
5601 GAAAGCACTTTGCGCGAAGTAACATTCCCACTGTTAATGTTGCAGTCAAAATTGTGGAAAAAAAAAAGTGGTGCTAAAAT
5681 TGTTCTGAAATGAAGATTGTTTGTTGTGGGGAATATTTTAATACTCTTGGACTTTAGGGAGGCTATTTTATGTGTCACTT
5761 GCTCCTAGTTGTTTCATTGTATTAGTAATTAGCAAACTGTCCTGGAACCAAGGGTTTGGTACTTTTGCCTGATTAGCATT
5841 CCATTATTTATTTGAAATGCTCAGTGTTTGCTCAAATTTGGTGAAAATATCTTTTGAAGACATATTCTCTGAGCCTTAAA
5921 AATGGCTGCTATCGACAGTACTGTAAGATGCACTGCCAGTAGATTTGATACTTTTCATTTCAGTGTAGGCAGTAATGTTT
6001 TCTAAGAAAGATTTAGAAATCAGCAAAGTGTAACAATTGTGTTTCATTTATGGAATGGAAAAACTGAAGTGTCCCATTCA
6081 GAACACTTTGGAAAGGTTGTCTGCATTAGGGGATGTTTCTGGAAGCATCCCTTAGAGAAGCTGCCTGAGGAATCTCCTTG
6161 CCAGGTTGTACCAGATTTTTTTTTTTCTTAAATGTATTGTATATATTTTCCTTAAAATGTCTTCATTGGCTGAATGATTC
6241 CTATCCGTAGTAATATTTTAGGTACTTGTTGGATTTTTAAAGGAAGATTATTTATTTTCAGATTTGCTGCTATAATTGAA
6321 AACCTAGTAACTGGTCCTGTTGATTGTGCCTTCATCACTGTTTCTCTGTGCCACGACCGTTCATGTGTATTTGAAATAAA
6401 GAAGTTTAAAAAGCCATGTTGAATTCAAGATTCCTTCTAATAAAAATAGGTGAAACTTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaGUGGAC-UCGA-GGGCACGGAc 5'
            | | || | || ||||||||| 
Target 5' tcCCCATGAATCTACCCGTGCCTa 3'
 2419 - 2442 160.00 -21.20
2 
miRNA  3' gaguggACUCGAGGGCACGGac 5'
                |||| |||||||:|  
Target 5' gataagTGAG-TCCCGTGTCca 3'
 1109 - 1129 131.00 -20.60
3 
miRNA  3' gaGUGGACU----CGA-GGGCACGGAc 5'
            :| |||:    |:|  ::|||||| 
Target 5' agTAACTGGTCCTGTTGATTGTGCCTt 3'
 6326 - 6352 130.00 -17.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26984317 20 COSMIC
COSN30177528 27 COSMIC
COSN31585403 32 COSMIC
COSN30141570 49 COSMIC
COSN30534185 51 COSMIC
COSN30494943 62 COSMIC
COSN30496044 65 COSMIC
COSN31578191 78 COSMIC
COSN30544735 87 COSMIC
COSN30460298 100 COSMIC
COSN20074205 102 COSMIC
COSN31489559 280 COSMIC
COSN31566054 479 COSMIC
COSN1863448 648 COSMIC
COSN28776980 703 COSMIC
COSN31519517 791 COSMIC
COSN31596495 829 COSMIC
COSN28478935 1372 COSMIC
COSN9394321 1971 COSMIC
COSN26851198 2058 COSMIC
COSN1863446 2573 COSMIC
COSN31959781 2772 COSMIC
COSN7996240 2939 COSMIC
COSN8897451 3452 COSMIC
COSN5963595 3686 COSMIC
COSN31558702 3903 COSMIC
COSN30510681 3904 COSMIC
COSN31486513 3959 COSMIC
COSN30167703 4018 COSMIC
COSM8544836 4072 COSMIC
COSM7538560 4078 COSMIC
COSM7204762 4085 COSMIC
COSM9041834 4113 COSMIC
COSN30168858 4183 COSMIC
COSN30526900 4187 COSMIC
COSN28654912 4237 COSMIC
COSN30121168 4357 COSMIC
COSN23343509 4394 COSMIC
COSN20074491 4419 COSMIC
COSN18944256 4752 COSMIC
COSN17037849 4884 COSMIC
COSN32058710 5071 COSMIC
COSN1863443 5611 COSMIC
COSN29008672 5657 COSMIC
COSN10010750 5933 COSMIC
COSN28981296 6175 COSMIC
COSN19655966 6187 COSMIC
COSN31557578 6219 COSMIC
COSN30175419 6385 COSMIC
rs12618769 2098 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1260456944 1 dbSNP
rs1205160173 2 dbSNP
rs374353063 3 dbSNP
rs746534525 4 dbSNP
rs773023810 6 dbSNP
rs1334606040 10 dbSNP
rs1021580761 12 dbSNP
rs928418926 15 dbSNP
rs772198496 17 dbSNP
rs528140328 22 dbSNP
rs1184280467 27 dbSNP
rs746717825 27 dbSNP
rs977281515 27 dbSNP
rs1164353711 30 dbSNP
rs1411868125 37 dbSNP
rs1235386324 38 dbSNP
rs747936684 42 dbSNP
rs560973320 47 dbSNP
rs891794625 48 dbSNP
rs150103313 51 dbSNP
rs1463624782 52 dbSNP
rs1310371474 54 dbSNP
rs1374135024 55 dbSNP
rs1003115806 57 dbSNP
rs967653038 58 dbSNP
rs1281948723 65 dbSNP
rs1357981655 68 dbSNP
rs1228541183 73 dbSNP
rs543899006 74 dbSNP
rs1193652121 78 dbSNP
rs1477014154 80 dbSNP
rs1271503570 81 dbSNP
rs1044560454 87 dbSNP
rs947788522 89 dbSNP
rs1199649867 90 dbSNP
rs763038000 91 dbSNP
rs1287360456 95 dbSNP
rs1197003200 98 dbSNP
rs914483268 103 dbSNP
rs768629725 110 dbSNP
rs537470045 116 dbSNP
rs185306546 119 dbSNP
rs112462294 120 dbSNP
rs953349150 139 dbSNP
rs558325679 141 dbSNP
rs997514748 144 dbSNP
rs1216725779 154 dbSNP
rs1371664394 154 dbSNP
rs74787967 154 dbSNP
rs1347117068 156 dbSNP
rs966094756 158 dbSNP
rs1015456746 160 dbSNP
rs1005038221 163 dbSNP
rs1448198797 163 dbSNP
rs759640999 173 dbSNP
rs887965985 182 dbSNP
rs1330709517 184 dbSNP
rs1362636375 190 dbSNP
rs1049295254 197 dbSNP
rs983801341 210 dbSNP
rs1012517271 211 dbSNP
rs894113623 212 dbSNP
rs1198664192 217 dbSNP
rs1393203348 239 dbSNP
rs1401145450 249 dbSNP
rs542782203 257 dbSNP
rs974507372 270 dbSNP
rs1247622058 271 dbSNP
rs964770853 287 dbSNP
rs535229455 291 dbSNP
rs1431842666 294 dbSNP
rs938370592 314 dbSNP
rs1477930128 319 dbSNP
rs1244619552 331 dbSNP
rs928398581 335 dbSNP
rs1183552509 344 dbSNP
rs956265142 353 dbSNP
rs1237065484 359 dbSNP
rs1031645131 363 dbSNP
rs1196625076 368 dbSNP
rs1317081262 378 dbSNP
rs1041888747 380 dbSNP
rs1263718109 385 dbSNP
rs776169562 387 dbSNP
rs1218420541 388 dbSNP
rs1369990518 393 dbSNP
rs566217718 398 dbSNP
rs1013126000 401 dbSNP
rs1273245765 404 dbSNP
rs1345678170 404 dbSNP
rs1201063740 411 dbSNP
rs1267625984 413 dbSNP
rs1463661689 417 dbSNP
rs898661539 424 dbSNP
rs1037478172 427 dbSNP
rs1377693596 429 dbSNP
rs1197249951 431 dbSNP
rs1379857775 435 dbSNP
rs1330796350 441 dbSNP
rs1444719452 450 dbSNP
rs1408900767 451 dbSNP
rs1335531848 453 dbSNP
rs531122964 466 dbSNP
rs747521289 468 dbSNP
rs886116262 471 dbSNP
rs1384830189 482 dbSNP
rs1325308273 485 dbSNP
rs1159895307 486 dbSNP
rs914402129 501 dbSNP
rs1047367094 509 dbSNP
rs1238255529 522 dbSNP
rs933234816 531 dbSNP
rs1327148179 537 dbSNP
rs1379352041 540 dbSNP
rs1268973521 546 dbSNP
rs555692477 549 dbSNP
rs536115863 557 dbSNP
rs953297208 562 dbSNP
rs974631469 569 dbSNP
rs772140082 573 dbSNP
rs976047357 577 dbSNP
rs943231710 617 dbSNP
rs1473282164 629 dbSNP
rs1159306688 644 dbSNP
rs914394871 644 dbSNP
rs1456097379 647 dbSNP
rs1295004972 652 dbSNP
rs966469163 654 dbSNP
rs1391209045 666 dbSNP
rs1390666919 675 dbSNP
rs1014990164 677 dbSNP
rs1352302640 683 dbSNP
rs1411718907 687 dbSNP
rs1289092726 695 dbSNP
rs1321304919 707 dbSNP
rs1242885097 717 dbSNP
rs1267544535 723 dbSNP
rs983959815 728 dbSNP
rs952219771 730 dbSNP
rs1204973768 732 dbSNP
rs771121443 733 dbSNP
rs570277610 735 dbSNP
rs895397663 753 dbSNP
rs1225637814 755 dbSNP
rs1423091106 759 dbSNP
rs1421633768 761 dbSNP
rs1166460936 770 dbSNP
rs981432407 771 dbSNP
rs971379960 776 dbSNP
rs1023262217 777 dbSNP
rs773653487 778 dbSNP
rs1372278457 779 dbSNP
rs1013155729 799 dbSNP
rs898693933 802 dbSNP
rs1308856190 803 dbSNP
rs1394424283 805 dbSNP
rs1315100935 807 dbSNP
rs1017084100 809 dbSNP
rs1238054259 815 dbSNP
rs1272957984 817 dbSNP
rs1344857030 818 dbSNP
rs1206522711 819 dbSNP
rs868125117 821 dbSNP
rs1481988893 822 dbSNP
rs369039206 822 dbSNP
rs1183137555 841 dbSNP
rs1002528740 845 dbSNP
rs1448525062 847 dbSNP
rs749619062 847 dbSNP
rs886148206 849 dbSNP
rs1391787958 851 dbSNP
rs1449939788 857 dbSNP
rs906889180 857 dbSNP
rs1175255560 860 dbSNP
rs772468188 864 dbSNP
rs1357422834 878 dbSNP
rs1047854903 896 dbSNP
rs1199663027 901 dbSNP
rs933032603 921 dbSNP
rs1434658174 923 dbSNP
rs549730277 925 dbSNP
rs945792902 928 dbSNP
rs901501476 933 dbSNP
rs1367781481 939 dbSNP
rs1229697912 940 dbSNP
rs532800414 946 dbSNP
rs560888080 955 dbSNP
rs943262870 957 dbSNP
rs914426048 959 dbSNP
rs563221708 966 dbSNP
rs1464108553 967 dbSNP
rs563896824 968 dbSNP
rs931848068 969 dbSNP
rs989961583 981 dbSNP
rs934749962 987 dbSNP
rs1445856839 998 dbSNP
rs924754025 1001 dbSNP
rs527391410 1014 dbSNP
rs561886740 1016 dbSNP
rs975995060 1017 dbSNP
rs375940655 1029 dbSNP
rs971411098 1030 dbSNP
rs1471784971 1033 dbSNP
rs1293333153 1035 dbSNP
rs944699362 1036 dbSNP
rs1243828366 1042 dbSNP
rs907879375 1062 dbSNP
rs1022958599 1066 dbSNP
rs1283303998 1069 dbSNP
rs1217029826 1072 dbSNP
rs1269594038 1087 dbSNP
rs1435185722 1095 dbSNP
rs1220491367 1097 dbSNP
rs1244792740 1102 dbSNP
rs1489391470 1106 dbSNP
rs983522342 1108 dbSNP
rs541679605 1122 dbSNP
rs748524606 1123 dbSNP
rs1472290189 1125 dbSNP
rs1059072 1132 dbSNP
rs990981136 1133 dbSNP
rs1157099237 1138 dbSNP
rs372255416 1139 dbSNP
rs1401535515 1141 dbSNP
rs1164440843 1144 dbSNP
rs1214742377 1151 dbSNP
rs959558939 1157 dbSNP
rs887263487 1158 dbSNP
rs1304275307 1160 dbSNP
rs545381430 1174 dbSNP
rs1350458449 1181 dbSNP
rs1313557711 1194 dbSNP
rs1289699963 1197 dbSNP
rs1350887292 1199 dbSNP
rs1227861863 1200 dbSNP
rs746041723 1201 dbSNP
rs1004222422 1211 dbSNP
rs1222085087 1212 dbSNP
rs1250965205 1223 dbSNP
rs1482045593 1233 dbSNP
rs1180056561 1244 dbSNP
rs1254077487 1247 dbSNP
rs1272493643 1256 dbSNP
rs1470603236 1257 dbSNP
rs1181482277 1261 dbSNP
rs796946923 1262 dbSNP
rs1370428126 1263 dbSNP
rs1428413256 1264 dbSNP
rs1020370980 1265 dbSNP
rs1446742342 1272 dbSNP
rs1282035939 1273 dbSNP
rs1009941417 1274 dbSNP
rs892876683 1275 dbSNP
rs778592470 1278 dbSNP
rs1054161218 1291 dbSNP
rs545665301 1302 dbSNP
rs562672954 1303 dbSNP
rs1207229637 1306 dbSNP
rs1040238026 1307 dbSNP
rs1163438428 1308 dbSNP
rs1403138221 1309 dbSNP
rs1421566135 1311 dbSNP
rs543829383 1312 dbSNP
rs578106177 1318 dbSNP
rs1184546078 1319 dbSNP
rs1389949385 1319 dbSNP
rs937561345 1323 dbSNP
rs983855365 1325 dbSNP
rs1171033909 1332 dbSNP
rs754632825 1333 dbSNP
rs1331658459 1339 dbSNP
rs1260802766 1341 dbSNP
rs1045843695 1342 dbSNP
rs1296526305 1343 dbSNP
rs1362755209 1346 dbSNP
rs1230419814 1350 dbSNP
rs920666924 1352 dbSNP
rs990928986 1353 dbSNP
rs950083978 1356 dbSNP
rs959506627 1363 dbSNP
rs1462768940 1364 dbSNP
rs928131578 1367 dbSNP
rs1204556142 1372 dbSNP
rs982344927 1393 dbSNP
rs748744781 1396 dbSNP
rs1220918713 1397 dbSNP
rs193051314 1405 dbSNP
rs1275649869 1411 dbSNP
rs991447440 1416 dbSNP
rs1219785670 1419 dbSNP
rs1426683415 1420 dbSNP
rs1317640324 1423 dbSNP
rs1276727438 1427 dbSNP
rs1469922044 1428 dbSNP
rs1319464442 1430 dbSNP
rs1010301727 1441 dbSNP
rs962962348 1443 dbSNP
rs541497877 1450 dbSNP
rs189129846 1452 dbSNP
rs555903162 1453 dbSNP
rs1355787565 1461 dbSNP
rs1267722340 1462 dbSNP
rs1171221655 1464 dbSNP
rs1465058147 1474 dbSNP
rs1207225934 1478 dbSNP
rs535700518 1484 dbSNP
rs1451481923 1490 dbSNP
rs578205065 1491 dbSNP
rs1178283681 1493 dbSNP
rs1157833913 1494 dbSNP
rs1433625804 1501 dbSNP
rs1268295834 1502 dbSNP
rs900308957 1510 dbSNP
rs1458514758 1514 dbSNP
rs951609029 1515 dbSNP
rs1389762808 1516 dbSNP
rs1384919589 1523 dbSNP
rs1325412091 1525 dbSNP
rs1346130012 1530 dbSNP
rs1040614171 1531 dbSNP
rs1287845819 1533 dbSNP
rs74347550 1535 dbSNP
rs1008771756 1543 dbSNP
rs1261596802 1546 dbSNP
rs1260317078 1549 dbSNP
rs1356089699 1549 dbSNP
rs79974244 1549 dbSNP
rs1199769516 1554 dbSNP
rs1180770922 1558 dbSNP
rs997240264 1576 dbSNP
rs1420443458 1577 dbSNP
rs1182064051 1585 dbSNP
rs1367597301 1587 dbSNP
rs182468958 1590 dbSNP
rs1456179070 1601 dbSNP
rs965730791 1602 dbSNP
rs1366071143 1606 dbSNP
rs779547823 1611 dbSNP
rs878871520 1614 dbSNP
rs1429033171 1616 dbSNP
rs553288278 1630 dbSNP
rs1047671426 1631 dbSNP
rs556483269 1638 dbSNP
rs1235881668 1641 dbSNP
rs1054403217 1650 dbSNP
rs1307941802 1660 dbSNP
rs1340145319 1669 dbSNP
rs1243001232 1670 dbSNP
rs1317644259 1672 dbSNP
rs999165278 1673 dbSNP
rs920614503 1678 dbSNP
rs1055186703 1683 dbSNP
rs938078355 1684 dbSNP
rs539744947 1685 dbSNP
rs1273179132 1691 dbSNP
rs1481324913 1696 dbSNP
rs34797560 1701 dbSNP
rs1195911440 1709 dbSNP
rs1300096456 1720 dbSNP
rs1421720076 1722 dbSNP
rs1045949236 1726 dbSNP
rs1217122221 1744 dbSNP
rs982677831 1756 dbSNP
rs1448709437 1759 dbSNP
rs915962774 1760 dbSNP
rs570071320 1774 dbSNP
rs1463568546 1780 dbSNP
rs1445452681 1784 dbSNP
rs1398020071 1785 dbSNP
rs72825711 1786 dbSNP
rs1401713884 1794 dbSNP
rs1450722987 1802 dbSNP
rs1317539025 1803 dbSNP
rs989766845 1805 dbSNP
rs140558935 1814 dbSNP
rs535762001 1815 dbSNP
rs1227471504 1816 dbSNP
rs1254909094 1823 dbSNP
rs1482037959 1824 dbSNP
rs976855366 1827 dbSNP
rs1431686138 1830 dbSNP
rs964174203 1836 dbSNP
rs1186499333 1846 dbSNP
rs995843631 1846 dbSNP
rs1421507336 1847 dbSNP
rs1429077816 1849 dbSNP
rs964428897 1854 dbSNP
rs1017347468 1855 dbSNP
rs1468351820 1868 dbSNP
rs767768870 1877 dbSNP
rs1018730383 1881 dbSNP
rs1434794189 1885 dbSNP
rs1287522097 1888 dbSNP
rs1364618335 1889 dbSNP
rs1383283150 1895 dbSNP
rs1301259981 1910 dbSNP
rs1309933967 1919 dbSNP
rs1224864910 1923 dbSNP
rs1009134257 1924 dbSNP
rs568089430 1936 dbSNP
rs753710003 1937 dbSNP
rs1033061438 1939 dbSNP
rs151292898 1944 dbSNP
rs201245439 1944 dbSNP
rs753184711 1944 dbSNP
rs998799835 1944 dbSNP
rs1265262285 1947 dbSNP
rs1236869896 1950 dbSNP
rs1479479047 1951 dbSNP
rs1202719959 1961 dbSNP
rs1483745779 1966 dbSNP
rs1456920617 1967 dbSNP
rs1157304371 1972 dbSNP
rs1347305698 1979 dbSNP
rs117577428 1985 dbSNP
rs1293429614 1987 dbSNP
rs1344226828 1991 dbSNP
rs899132236 1995 dbSNP
rs867486152 2000 dbSNP
rs1055125541 2007 dbSNP
rs894308381 2011 dbSNP
rs1283400873 2012 dbSNP
rs1055910679 2021 dbSNP
rs1221724899 2025 dbSNP
rs1285977328 2027 dbSNP
rs1317288048 2032 dbSNP
rs941415149 2046 dbSNP
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rs888475173 2048 dbSNP
rs1490826131 2056 dbSNP
rs546072628 2067 dbSNP
rs1309617717 2070 dbSNP
rs1269716131 2071 dbSNP
rs938026097 2082 dbSNP
rs1175699933 2090 dbSNP
rs1410494550 2091 dbSNP
rs532459323 2093 dbSNP
rs1364206688 2097 dbSNP
rs12618769 2098 dbSNP
rs922881757 2101 dbSNP
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rs942895631 2110 dbSNP
rs778404883 2112 dbSNP
rs537178060 2118 dbSNP
rs985855781 2119 dbSNP
rs1312653572 2124 dbSNP
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rs188445424 5229 dbSNP
rs1347936647 5234 dbSNP
rs1478982589 5238 dbSNP
rs918609045 5242 dbSNP
rs1267072193 5257 dbSNP
rs1305184733 5258 dbSNP
rs1245472132 5268 dbSNP
rs748555649 5273 dbSNP
rs1333823182 5277 dbSNP
rs899153207 5289 dbSNP
rs1037085163 5293 dbSNP
rs777254974 5294 dbSNP
rs34284037 5298 dbSNP
rs1300313692 5301 dbSNP
rs1220283129 5306 dbSNP
rs1235279124 5307 dbSNP
rs1256563184 5309 dbSNP
rs1348615660 5313 dbSNP
rs1172051198 5316 dbSNP
rs1216020055 5318 dbSNP
rs1342612222 5320 dbSNP
rs910009008 5321 dbSNP
rs1489402798 5335 dbSNP
rs980259733 5337 dbSNP
rs1187391161 5339 dbSNP
rs1267105259 5341 dbSNP
rs1381663510 5346 dbSNP
rs1382890940 5347 dbSNP
rs970282748 5349 dbSNP
rs1396237785 5361 dbSNP
rs1418519291 5362 dbSNP
rs1156317465 5363 dbSNP
rs3171842 5364 dbSNP
rs993105342 5369 dbSNP
rs185354913 5375 dbSNP
rs1292624511 5376 dbSNP
rs1365192971 5380 dbSNP
rs1417820673 5387 dbSNP
rs538462804 5397 dbSNP
rs559438603 5405 dbSNP
rs1051847284 5406 dbSNP
rs373383226 5412 dbSNP
rs542453913 5414 dbSNP
rs1216736312 5417 dbSNP
rs932145230 5420 dbSNP
rs879112696 5425 dbSNP
rs548065759 5429 dbSNP
rs921053410 5434 dbSNP
rs745376513 5439 dbSNP
rs1479039995 5442 dbSNP
rs1177386670 5446 dbSNP
rs573733185 5447 dbSNP
rs1381591782 5448 dbSNP
rs975171235 5455 dbSNP
rs556886315 5456 dbSNP
rs977764886 5464 dbSNP
rs773471408 5465 dbSNP
rs1399349738 5467 dbSNP
rs967762094 5474 dbSNP
rs1022028208 5475 dbSNP
rs536913705 5476 dbSNP
rs1268869782 5477 dbSNP
rs577808059 5479 dbSNP
rs1209967633 5481 dbSNP
rs1320149608 5483 dbSNP
rs1215849016 5484 dbSNP
rs956568665 5509 dbSNP
rs1271270483 5516 dbSNP
rs1457630823 5523 dbSNP
rs1240591958 5527 dbSNP
rs1200295146 5532 dbSNP
rs1411102238 5540 dbSNP
rs1318354459 5541 dbSNP
rs1422621316 5542 dbSNP
rs1270929179 5543 dbSNP
rs1333231315 5544 dbSNP
rs1355074388 5545 dbSNP
rs1442936522 5557 dbSNP
rs1034857103 5567 dbSNP
rs1003409263 5572 dbSNP
rs889645060 5573 dbSNP
rs1324951955 5588 dbSNP
rs1303456397 5589 dbSNP
rs577538403 5589 dbSNP
rs969245329 5593 dbSNP
rs1294186751 5594 dbSNP
rs1317627229 5596 dbSNP
rs1217215203 5598 dbSNP
rs1275640054 5600 dbSNP
rs1438909932 5607 dbSNP
rs1029965050 5613 dbSNP
rs1394373187 5614 dbSNP
rs998121392 5615 dbSNP
rs778217830 5616 dbSNP
rs994905487 5619 dbSNP
rs1037032380 5624 dbSNP
rs941377038 5628 dbSNP
rs143090584 5631 dbSNP
rs768017166 5633 dbSNP
rs1420073148 5634 dbSNP
rs1044525408 5644 dbSNP
rs1173914473 5645 dbSNP
rs149066870 5658 dbSNP
rs1416724728 5664 dbSNP
rs917430051 5665 dbSNP
rs1340123143 5668 dbSNP
rs1398473441 5668 dbSNP
rs368997909 5668 dbSNP
rs566845365 5668 dbSNP
rs922109120 5668 dbSNP
rs1166909271 5670 dbSNP
rs1474209854 5674 dbSNP
rs1379051017 5677 dbSNP
rs1039871263 5681 dbSNP
rs1198950503 5683 dbSNP
rs552986869 5686 dbSNP
rs1211019328 5690 dbSNP
rs1261934805 5697 dbSNP
rs547121295 5697 dbSNP
rs924899155 5700 dbSNP
rs1242453767 5701 dbSNP
rs1477602433 5704 dbSNP
rs558119007 5706 dbSNP
rs977714148 5706 dbSNP
rs987769586 5711 dbSNP
rs1458017954 5725 dbSNP
rs967711131 5726 dbSNP
rs748887919 5729 dbSNP
rs777430267 5735 dbSNP
rs181096059 5736 dbSNP
rs927903751 5739 dbSNP
rs1320582563 5740 dbSNP
rs1327370019 5743 dbSNP
rs1235038369 5760 dbSNP
rs1370342760 5763 dbSNP
rs982014267 5768 dbSNP
rs969642493 5785 dbSNP
rs1284672837 5787 dbSNP
rs953980098 5790 dbSNP
rs1206503182 5793 dbSNP
rs1284546647 5797 dbSNP
rs1450781728 5798 dbSNP
rs1301827773 5799 dbSNP
rs755867886 5805 dbSNP
rs188771996 5808 dbSNP
rs185047554 5821 dbSNP
rs1454645435 5830 dbSNP
rs998466929 5831 dbSNP
rs770207363 5854 dbSNP
rs531205996 5858 dbSNP
rs897068374 5861 dbSNP
rs1015550278 5862 dbSNP
rs752541430 5866 dbSNP
rs1403889851 5875 dbSNP
rs565609969 5886 dbSNP
rs1397223882 5888 dbSNP
rs781180176 5904 dbSNP
rs1173895363 5909 dbSNP
rs1309232573 5913 dbSNP
rs1373947042 5914 dbSNP
rs1240595305 5915 dbSNP
rs1262661509 5919 dbSNP
rs1014956787 5931 dbSNP
rs1355223529 5931 dbSNP
rs1207758524 5932 dbSNP
rs1044838023 5933 dbSNP
rs1468783097 5934 dbSNP
rs890438577 5935 dbSNP
rs551385666 5936 dbSNP
rs1236310882 5942 dbSNP
rs1030567974 5943 dbSNP
rs1364546121 5945 dbSNP
rs996413091 5945 dbSNP
rs900684924 5955 dbSNP
rs754940216 5958 dbSNP
rs1420442445 5959 dbSNP
rs193179711 5961 dbSNP
rs1398739323 5966 dbSNP
rs895926418 5967 dbSNP
rs893594106 5971 dbSNP
rs1339434461 5976 dbSNP
rs1052180703 5979 dbSNP
rs1258446754 5983 dbSNP
rs1335184107 5983 dbSNP
rs1057291480 5986 dbSNP
rs1211902647 5994 dbSNP
rs559087824 5995 dbSNP
rs1347179417 5997 dbSNP
rs1217819846 6004 dbSNP
rs144939266 6008 dbSNP
rs927586407 6010 dbSNP
rs924846824 6013 dbSNP
rs982456835 6015 dbSNP
rs947957409 6016 dbSNP
rs376226232 6018 dbSNP
rs1186014596 6019 dbSNP
rs973297669 6023 dbSNP
rs1279548059 6025 dbSNP
rs1440402318 6029 dbSNP
rs1475699252 6030 dbSNP
rs1170423163 6031 dbSNP
rs1371760998 6031 dbSNP
rs963544133 6038 dbSNP
rs1169037218 6039 dbSNP
rs1400845673 6041 dbSNP
rs1342643575 6045 dbSNP
rs1014987865 6050 dbSNP
rs150256020 6056 dbSNP
rs112517544 6069 dbSNP
rs1309111672 6082 dbSNP
rs1228029628 6084 dbSNP
rs985574440 6105 dbSNP
rs1344344436 6110 dbSNP
rs534942491 6112 dbSNP
rs1282661852 6114 dbSNP
rs1486113471 6121 dbSNP
rs1030263708 6124 dbSNP
rs953818435 6126 dbSNP
rs190363467 6130 dbSNP
rs766313203 6133 dbSNP
rs976601919 6145 dbSNP
rs1377590109 6147 dbSNP
rs1407083753 6148 dbSNP
rs961224963 6150 dbSNP
rs1156747541 6151 dbSNP
rs1418715310 6154 dbSNP
rs1286801496 6155 dbSNP
rs1363793829 6156 dbSNP
rs1382599460 6170 dbSNP
rs1300419498 6174 dbSNP
rs1329282283 6175 dbSNP
rs1236474495 6179 dbSNP
rs1473632425 6182 dbSNP
rs1022285831 6183 dbSNP
rs1011786509 6187 dbSNP
rs1052198594 6187 dbSNP
rs567253164 6187 dbSNP
rs1257993226 6193 dbSNP
rs1206095843 6196 dbSNP
rs1187017465 6199 dbSNP
rs935045980 6203 dbSNP
rs1196132101 6204 dbSNP
rs1395133114 6207 dbSNP
rs1438595431 6213 dbSNP
rs1156438850 6218 dbSNP
rs906201818 6218 dbSNP
rs1485450187 6225 dbSNP
rs1292712678 6228 dbSNP
rs1392105732 6234 dbSNP
rs1442971331 6244 dbSNP
rs763150313 6247 dbSNP
rs1371755231 6249 dbSNP
rs1005488057 6250 dbSNP
rs1447671096 6262 dbSNP
rs1284106308 6294 dbSNP
rs1222596238 6298 dbSNP
rs879150941 6305 dbSNP
rs947706531 6313 dbSNP
rs1467450657 6334 dbSNP
rs1216076081 6341 dbSNP
rs916543909 6346 dbSNP
rs1294273265 6348 dbSNP
rs1174985273 6354 dbSNP
rs185840143 6359 dbSNP
rs1233124777 6364 dbSNP
rs1353160974 6370 dbSNP
rs952649463 6374 dbSNP
rs1163683952 6375 dbSNP
rs1415367114 6377 dbSNP
rs1022961084 6378 dbSNP
rs941898570 6379 dbSNP
rs1399464608 6394 dbSNP
rs907683742 6401 dbSNP
rs1296509943 6426 dbSNP
rs577501123 6435 dbSNP
rs1344120081 6453 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 11320.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065668. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gaguggacUCGA-GGGCACGGAc 5'
                  | || ||||||||| 
Target 5' -------aAUCUACCCGUGCCUa 3'
 		1 - 16
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065668
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_7
Location of target site ENST00000264968.3 | 3UTR | AAUCUACCCGUGCCUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
THCA 0.322 0.22 0.452 0.13 8 Click to see details
THCA 0.322 0.22 0.452 0.13 8 Click to see details
THCA 0.322 0.22 0.452 0.13 8 Click to see details
THCA 0.322 0.22 0.452 0.13 8 Click to see details
THCA 0.322 0.22 0.452 0.13 8 Click to see details
THCA 0.322 0.22 0.452 0.13 8 Click to see details
THCA 0.322 0.22 0.452 0.13 8 Click to see details
61 hsa-miR-3622a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT166678 ZSWIM6 zinc finger SWIM-type containing 6 2 2
MIRT452081 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT457039 S1PR3 sphingosine-1-phosphate receptor 3 2 2
MIRT471975 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474065 LMNB2 lamin B2 2 2
MIRT475862 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT476191 GOLGA8A golgin A8 family member A 2 2
MIRT476521 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT483046 C15orf52 chromosome 15 open reading frame 52 2 4
MIRT495541 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT495892 CLOCK clock circadian regulator 2 2
MIRT495992 LTBP2 latent transforming growth factor beta binding protein 2 2 2
MIRT496001 EMP1 epithelial membrane protein 1 2 2
MIRT496208 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT496427 ACTRT3 actin related protein T3 2 2
MIRT496438 ZNF704 zinc finger protein 704 2 2
MIRT496473 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT496555 TBX15 T-box 15 2 2
MIRT497202 CECR1 adenosine deaminase 2 2 2
MIRT507632 CREBZF CREB/ATF bZIP transcription factor 2 2
MIRT513377 MGAT4A mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A 2 2
MIRT523460 GOLGA8J golgin A8 family member J 2 2
MIRT523465 GOLGA8I golgin A8 family member I, pseudogene 1 1
MIRT526049 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT533122 YIPF4 Yip1 domain family member 4 2 2
MIRT534183 SLC8A1 solute carrier family 8 member A1 2 2
MIRT556618 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT563361 WHSC1 nuclear receptor binding SET domain protein 2 2 2
MIRT563868 FAM206A family with sequence similarity 206 member A 2 2
MIRT564360 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 2 2
MIRT564661 ZNF449 zinc finger protein 449 2 2
MIRT564805 ZBTB33 zinc finger and BTB domain containing 33 2 2
MIRT564867 ZBED3 zinc finger BED-type containing 3 2 2
MIRT565340 TMEM104 transmembrane protein 104 2 2
MIRT566439 PHF16 jade family PHD finger 3 2 2
MIRT567587 FCHSD2 FCH and double SH3 domains 2 2 2
MIRT569597 C3orf62 chromosome 3 open reading frame 62 2 2
MIRT569700 FMNL3 formin like 3 2 2
MIRT575957 Nanos1 nanos homolog 1 (Drosophila) 2 3
MIRT576516 Slc35e2 solute carrier family 35, member E2 2 2
MIRT608480 RRP36 ribosomal RNA processing 36 2 2
MIRT614335 NANOS1 nanos C2HC-type zinc finger 1 2 3
MIRT630816 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT631708 C1QTNF6 C1q and TNF related 6 2 2
MIRT632369 SRRD SRR1 domain containing 2 2
MIRT633471 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT634478 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 2
MIRT667336 MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 2 2
MIRT667654 LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2 2
MIRT671046 SS18 SS18, nBAF chromatin remodeling complex subunit 2 2
MIRT672823 VEZT vezatin, adherens junctions transmembrane protein 2 2
MIRT673049 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT673435 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT676096 DPP9 dipeptidyl peptidase 9 2 2
MIRT678059 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT679783 GOLGA2 golgin A2 2 2
MIRT684219 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT697642 WRN Werner syndrome RecQ like helicase 2 2
MIRT706595 C1RL complement C1r subcomponent like 2 2
MIRT706603 CCS copper chaperone for superoxide dismutase 2 2
MIRT717647 HLX H2.0 like homeobox 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3622a Doxorubicin 31703 NSC123127 approved resistant High Hepatocellular Carcinoma cell line (HepG2)
hsa-mir-3622a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-miR-3622a-5p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-3622a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3622a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3622a-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3622a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-3622a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR3)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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