miRTarBase - #MIRT514246


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pre-miRNA Information
pre-miRNA hsa-mir-6818   
Genomic Coordinates chr22: 30007049 - 30007113
Description Homo sapiens miR-6818 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6818-3p
Sequence 44| UUGUCUCUUGUUCCUCACACAG |65
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1325627700 2 dbSNP
rs750902684 3 dbSNP
rs756542190 6 dbSNP
rs1365035732 17 dbSNP
Putative Targets

Gene Information
Gene Symbol S1PR2   
Synonyms AGR16, DFNB68, EDG-5, EDG5, Gpcr13, H218, LPB2, S1P2
Description sphingosine-1-phosphate receptor 2
Transcript NM_004230   
Expression
Putative miRNA Targets on S1PR2
3'UTR of S1PR2
(miRNA target sites are highlighted)		 
>S1PR2|NM_004230|3'UTR
   1 GGGTGGGGGTGGACCAACAACCAGGCCAGGGCAGAGGGGTTCATGGAGAGGCCACTGGGTGACCCCAGATAGAGACTTGG
  81 GGCTACTGAGCCAGATGCCCCCGCCCCACAGACCTGGGTGATGTTGCAAATATTTCACACCTGGAAAGGCCAGATAAGGC
 161 ACTGACTAGTCACATAGCAGTGTTGCAGTGCGGTCCTGAGGGCCAGTCCAGTGGCTAGTGTGACCCCTTTAGAACTGGAT
 241 CCTGGGGAGGCCAGGGCAGGGGACCTGTGAAGAGCCAGGGTGAGGGCAGGCAGCATTTAAGGGGAGCTCAGGGCAGGAGC
 321 ACTTTACCACCTGGTACAAAGGATTTTTTTTTTTTTTTGAGACGGAATCTTGCACTGCTGCCCAGGCTGGAGTGCAGTGG
 401 CGTGATCTCGGCTCACCGCAAGCTCCGCCTCCTGGGTTCATGTCGTTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTA
 481 TAGGCGCCTGCCACCACACCTGGCTAATTTTTTGTACCTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCT
 561 TGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCTT
 641 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGAAGTCTCGCTCTGTTGCCCAGGCTGGAGAGTGCAGTGGT
 721 ACGGTCTCAGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCCAGCCTGAGCCTCCTGAGTAGCTGGGATTAC
 801 AGGTGCCTACCACCACGCCCAGGTAATTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGG
 881 CTGGTCTCGAACTCCTGACCTCATGATCCGCCCGTGTTGGCCTCCCAAAGTGTGGGATTACAGGCGTAAGCCACCTCACC
 961 TGGCGGTACAAAGAATTTCTGCATTTTCTTCCCTGGCCCCTAGTCCTGCACCGATTTCTCCTTTTCGAATGTATTCCTCC
1041 TGCCACCTTCTCTGGGCAACTTCGTGCGACTACAGAACCACTGTCCTGAGGAGCTAGAGGCCTCCTCTCTGACCATCCAG
1121 AGCCCAAATCCACAGCTTCCCCAAATTTCATCAGCTGCCACTTGACGACTTCTCCCCGTCTCTCTGAGGCCCGGAAACCA
1201 CGGCTGGAGGTGGGGAGGGGATGGCGGCTGAGGTCCATTCCTCATTCTCAGACCTCATTGCTCAGTTGCACTATTTGGGG
1281 CACAGAATAATCACCAAAAGTGAGAAAAACGAGTTTGGGTGGCTGGGGAGGACTTTGGGACTCTTGATGCAAGGCGCAAC
1361 TTGAGAAAATTCTGGGTGTGATATTTGCACAGACACCCTCCTTTCAAAAACAGCCACCCCCCAAGCTATTCTCAGCTCCA
1441 CACCTGCAGCCCCAGCTAAGGTACCAGGTCTCCTGAGCAAGGCAGAGAGAAGCCTTGAGCCTTCTCTGTGTCTTCTTTCA
1521 AGAACCCCGCTGTGTCTTCTTTCAAGATTTTTTTTTTGAGACAGTTTCAAGATTTTTGTTTTGTTTTTGAGATGGAGTCT
1601 CACTGTGTCACCCAGGCTGAGGTGGCAGTGGTTCAATCTCCGTTCACTGCCACCTCCACCTCCCGGGTTCAAGCGATTCT
1681 CCTGCTTCAGCCTCTCGAGTAGCTGGGACTACAGGCACCTGCCACCATGTCTGGCTAATTTTTGTATTTTTAGTAGAGAC
1761 AGGGTTTCACTACGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCGCCCGCCTCGGCCTCCCCAATTGCTG
1841 GGATTACAGGCGTGAGCCACTGTGCCCGGCCTTCTTCTTTCAAGTTATATAGAATGGAGCATGGGGGTGGCAGTGGCTAG
1921 GGACATTTCCTGGGGACACTCTCCCCTAACCCCCCAGAAGGACTTCACAAAAACCTGTGGATAATGGAAGGGATGTTACG
2001 GTACAAACGTATATTTATGTGTGTGTGTGTGTATGTGTGTGCGCGCGCGCGTGTGCACATAGGCGTGATGTCTGTGACCC
2081 TCCTCTCCTCGTCACATTTCCCCCAGAATGAATGCTGTCCTGTCTGCTCATGTTTGTGTTGAAGCTGCCAAAGTCGGGGA
2161 GCTCTGGTCCTGCCCAGACCCCTTTGGAATTGCTGGCCCATCCTCCCACTGGAGAGCTGGGGTGCAGCTCACCTTGGGGA
2241 AGGAAACCTCATGCCTCAGAGTAATTTCTTGTGAATGCAAAGCCTGGGGGAGCGGGTCTTTGGGGGGCAAGGAGCCAGTC
2321 AGGGGCTTGTTTCCCCTCATAGAGCTCCCCAGACGTGCCTCCGCAATGCCTGAAACCCAGACCTAGGCTAATAAACGGTT
2401 CAATTTCTGTTAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaCACACUCCUUGUUCUCUGUu 5'
            |||  || ::| ||:|||| 
Target 5' ggGTGGCAGTGGCTAGGGACAt 3'
 1905 - 1926 144.00 -13.40
2 
miRNA  3' gacacacuccuuguUCUCUGUu 5'
                        ||||||| 
Target 5' tttgtatttttagtAGAGACAg 3'
 1741 - 1762 140.00 -9.81
3 
miRNA  3' gacacACUCCUUGUUCUCUGuu 5'
               ||||||:| ||||:|  
Target 5' tgtccTGAGGAGCTAGAGGCct 3'
 1082 - 1103 137.00 -18.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1199706 80 ClinVar
1199924 138 ClinVar
COSN30513603 1 COSMIC
COSN1210442 15 COSMIC
COSN6137507 20 COSMIC
COSN27003364 43 COSMIC
COSN28657429 77 COSMIC
COSN21341542 562 COSMIC
COSN22833639 639 COSMIC
COSN29517726 639 COSMIC
COSN22388157 694 COSMIC
COSN32095516 750 COSMIC
COSN9845795 917 COSMIC
COSN21591506 962 COSMIC
COSN21589472 963 COSMIC
COSN16130290 1079 COSMIC
COSN8552032 1577 COSMIC
COSN4777050 1774 COSMIC
COSN8552031 2004 COSMIC
rs2116941 77 GWAS
rs10409243 1532 GWAS
rs55818584 1973 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1234145823 1 dbSNP
rs976886957 2 dbSNP
rs372799945 3 dbSNP
rs1429721021 4 dbSNP
rs763419270 4 dbSNP
rs1488419668 18 dbSNP
rs753076607 22 dbSNP
rs989151064 22 dbSNP
rs764211203 23 dbSNP
rs370864731 26 dbSNP
rs1266011953 36 dbSNP
rs560621469 37 dbSNP
rs753104727 39 dbSNP
rs767947690 40 dbSNP
rs545591591 42 dbSNP
rs772959230 44 dbSNP
rs764867123 46 dbSNP
rs761373331 50 dbSNP
rs1030834900 58 dbSNP
rs578178978 63 dbSNP
rs1440625563 67 dbSNP
rs1279553522 75 dbSNP
rs1346503694 76 dbSNP
rs2116941 77 dbSNP
rs537826575 80 dbSNP
rs1252855785 82 dbSNP
rs1214799723 85 dbSNP
rs1198936077 94 dbSNP
rs1435630893 95 dbSNP
rs1203730361 98 dbSNP
rs1024826191 100 dbSNP
rs753016578 102 dbSNP
rs574009566 103 dbSNP
rs948625571 109 dbSNP
rs895225635 114 dbSNP
rs1168731487 129 dbSNP
rs1421731821 131 dbSNP
rs1408316455 135 dbSNP
rs116309379 138 dbSNP
rs1366677084 149 dbSNP
rs1407330869 153 dbSNP
rs1006188110 164 dbSNP
rs1057340080 178 dbSNP
rs1281993615 179 dbSNP
rs1227685992 190 dbSNP
rs555080829 191 dbSNP
rs1047982082 192 dbSNP
rs533986129 195 dbSNP
rs908589678 196 dbSNP
rs1361460475 202 dbSNP
rs1221889331 206 dbSNP
rs984202832 220 dbSNP
rs1267848607 223 dbSNP
rs1447426058 226 dbSNP
rs566636069 235 dbSNP
rs1402703132 251 dbSNP
rs1194126582 255 dbSNP
rs1344093334 257 dbSNP
rs1244100667 258 dbSNP
rs1295653821 260 dbSNP
rs557522753 268 dbSNP
rs1385946059 272 dbSNP
rs921252993 277 dbSNP
rs1039191686 280 dbSNP
rs943566338 284 dbSNP
rs910970216 287 dbSNP
rs1383167539 293 dbSNP
rs1319859273 309 dbSNP
rs1324270758 311 dbSNP
rs767819389 322 dbSNP
rs754654557 330 dbSNP
rs1315060160 332 dbSNP
rs1316799885 339 dbSNP
rs1384386974 344 dbSNP
rs1290993229 359 dbSNP
rs1351096965 359 dbSNP
rs879772088 359 dbSNP
rs1402569171 363 dbSNP
rs539668453 364 dbSNP
rs1445426096 371 dbSNP
rs936304928 387 dbSNP
rs34016247 391 dbSNP
rs923622569 392 dbSNP
rs181198866 400 dbSNP
rs534824645 401 dbSNP
rs559827831 402 dbSNP
rs561184497 405 dbSNP
rs188338262 410 dbSNP
rs1456329720 412 dbSNP
rs1337056356 417 dbSNP
rs183589749 418 dbSNP
rs1449889906 426 dbSNP
rs181902354 427 dbSNP
rs1336235414 429 dbSNP
rs1032504553 432 dbSNP
rs990666888 433 dbSNP
rs546621525 444 dbSNP
rs1264034796 445 dbSNP
rs1465000868 450 dbSNP
rs1006323911 463 dbSNP
rs1201802482 468 dbSNP
rs904294633 471 dbSNP
rs1420136652 478 dbSNP
rs756289370 481 dbSNP
rs1221079286 485 dbSNP
rs1307066452 486 dbSNP
rs528150291 489 dbSNP
rs564208800 490 dbSNP
rs144320768 492 dbSNP
rs1467933618 497 dbSNP
rs1301680002 498 dbSNP
rs1393049484 499 dbSNP
rs1012596744 523 dbSNP
rs1039730535 525 dbSNP
rs1349617542 526 dbSNP
rs1223942797 529 dbSNP
rs1284983512 530 dbSNP
rs1361664088 536 dbSNP
rs1325880550 537 dbSNP
rs895690055 538 dbSNP
rs558789721 540 dbSNP
rs189137467 541 dbSNP
rs1389562181 542 dbSNP
rs1249090481 554 dbSNP
rs893300455 555 dbSNP
rs1200542964 561 dbSNP
rs1336168721 575 dbSNP
rs1479218486 576 dbSNP
rs1174981813 579 dbSNP
rs1373148841 582 dbSNP
rs1053439722 583 dbSNP
rs538799740 586 dbSNP
rs1369820972 587 dbSNP
rs1361138759 591 dbSNP
rs1385297389 592 dbSNP
rs923715717 600 dbSNP
rs1042022713 603 dbSNP
rs949112705 605 dbSNP
rs1272608227 607 dbSNP
rs1341987836 610 dbSNP
rs1223895119 611 dbSNP
rs1177009214 613 dbSNP
rs1427753614 619 dbSNP
rs1190240560 620 dbSNP
rs1262052180 622 dbSNP
rs1429954545 624 dbSNP
rs1417112774 628 dbSNP
rs1389019448 629 dbSNP
rs1188276904 630 dbSNP
rs1450009055 631 dbSNP
rs1363485097 632 dbSNP
rs1242388458 635 dbSNP
rs1362870351 636 dbSNP
rs1384134572 637 dbSNP
rs1201252208 638 dbSNP
rs1247340652 639 dbSNP
rs1294636570 641 dbSNP
rs1462233244 648 dbSNP
rs1320267624 653 dbSNP
rs1256265092 657 dbSNP
rs1203353131 664 dbSNP
rs1307346448 665 dbSNP
rs1293879238 666 dbSNP
rs1230989313 670 dbSNP
rs1366577732 673 dbSNP
rs917803780 674 dbSNP
rs1314904822 675 dbSNP
rs1159475541 676 dbSNP
rs1184422719 676 dbSNP
rs1185318614 676 dbSNP
rs1206436702 676 dbSNP
rs1228257813 676 dbSNP
rs1261714572 676 dbSNP
rs1302437697 676 dbSNP
rs1308083433 676 dbSNP
rs1317280579 676 dbSNP
rs1318861037 676 dbSNP
rs1346756035 676 dbSNP
rs1377571236 676 dbSNP
rs1387957050 676 dbSNP
rs1423201389 676 dbSNP
rs1444464130 676 dbSNP
rs1444789666 676 dbSNP
rs1455526706 676 dbSNP
rs1486606561 676 dbSNP
rs779228186 676 dbSNP
rs1267149401 677 dbSNP
rs148328365 678 dbSNP
rs761763926 679 dbSNP
rs1450582871 680 dbSNP
rs1381390848 682 dbSNP
rs1461363185 682 dbSNP
rs1303701207 684 dbSNP
rs1204968385 686 dbSNP
rs1235243376 687 dbSNP
rs1461667490 688 dbSNP
rs1352913202 689 dbSNP
rs113804225 690 dbSNP
rs1430108715 691 dbSNP
rs1168856839 692 dbSNP
rs1042885647 694 dbSNP
rs1384565520 695 dbSNP
rs959207613 700 dbSNP
rs1411447824 701 dbSNP
rs909059836 707 dbSNP
rs11672059 709 dbSNP
rs984648600 714 dbSNP
rs950766848 717 dbSNP
rs1447930347 718 dbSNP
rs1299314313 722 dbSNP
rs1425093371 723 dbSNP
rs1026436678 726 dbSNP
rs1288147230 728 dbSNP
rs1323712943 729 dbSNP
rs866461482 732 dbSNP
rs997513795 733 dbSNP
rs11880277 746 dbSNP
rs1234578276 750 dbSNP
rs1017819690 761 dbSNP
rs1176339110 763 dbSNP
rs1177808703 776 dbSNP
rs1269339385 779 dbSNP
rs886936400 784 dbSNP
rs573999764 789 dbSNP
rs144263589 804 dbSNP
rs931369143 807 dbSNP
rs921377810 811 dbSNP
rs555303276 813 dbSNP
rs540272270 816 dbSNP
rs572999098 817 dbSNP
rs1171710908 832 dbSNP
rs1356742887 835 dbSNP
rs1042124350 836 dbSNP
rs1207373336 841 dbSNP
rs1307744261 841 dbSNP
rs35364624 841 dbSNP
rs558153089 841 dbSNP
rs1011767543 843 dbSNP
rs1342408760 844 dbSNP
rs1313537770 845 dbSNP
rs949047105 846 dbSNP
rs1390834852 849 dbSNP
rs1371479748 850 dbSNP
rs867018617 854 dbSNP
rs1310040325 857 dbSNP
rs1410248924 858 dbSNP
rs1269319439 866 dbSNP
rs1364705190 867 dbSNP
rs1201243926 868 dbSNP
rs1161659025 869 dbSNP
rs1459378489 874 dbSNP
rs1187147581 875 dbSNP
rs1368919754 881 dbSNP
rs1157755117 888 dbSNP
rs1416741270 889 dbSNP
rs1253564327 891 dbSNP
rs1182414377 902 dbSNP
rs1483615528 903 dbSNP
rs1268619365 905 dbSNP
rs1322010395 906 dbSNP
rs988342147 910 dbSNP
rs956980428 913 dbSNP
rs558259993 914 dbSNP
rs1266493847 915 dbSNP
rs185250322 916 dbSNP
rs1315168635 918 dbSNP
rs568999142 945 dbSNP
rs968843079 946 dbSNP
rs375839774 948 dbSNP
rs1288922693 952 dbSNP
rs1451190167 957 dbSNP
rs1344715794 964 dbSNP
rs1249973624 975 dbSNP
rs1447774689 982 dbSNP
rs1022722221 988 dbSNP
rs1188458087 992 dbSNP
rs776323559 1001 dbSNP
rs1386343497 1013 dbSNP
rs1474062716 1014 dbSNP
rs1012958774 1026 dbSNP
rs1390492912 1027 dbSNP
rs959731272 1029 dbSNP
rs1400906406 1037 dbSNP
rs1322181986 1050 dbSNP
rs1301075348 1058 dbSNP
rs1388241504 1063 dbSNP
rs1035389432 1067 dbSNP
rs1288176358 1068 dbSNP
rs75737111 1074 dbSNP
rs950568257 1081 dbSNP
rs1283362582 1087 dbSNP
rs919301316 1093 dbSNP
rs976170855 1098 dbSNP
rs1159529536 1111 dbSNP
rs1270319516 1131 dbSNP
rs1463725513 1143 dbSNP
rs1479907526 1144 dbSNP
rs1426700731 1149 dbSNP
rs1444586393 1153 dbSNP
rs966040650 1165 dbSNP
rs887049476 1166 dbSNP
rs1453640852 1167 dbSNP
rs1160905588 1170 dbSNP
rs1018040959 1177 dbSNP
rs757839210 1178 dbSNP
rs1463642701 1183 dbSNP
rs1336766459 1192 dbSNP
rs995366298 1193 dbSNP
rs1033256913 1198 dbSNP
rs1333508608 1201 dbSNP
rs1336116780 1215 dbSNP
rs1240852252 1225 dbSNP
rs1229013753 1228 dbSNP
rs10415075 1232 dbSNP
rs879265285 1235 dbSNP
rs899874809 1240 dbSNP
rs1039787047 1242 dbSNP
rs1228038886 1259 dbSNP
rs944152284 1262 dbSNP
rs1347268001 1265 dbSNP
rs1196394552 1271 dbSNP
rs535693204 1273 dbSNP
rs1256138235 1280 dbSNP
rs1438910760 1287 dbSNP
rs1184700406 1294 dbSNP
rs1250101095 1310 dbSNP
rs1472030037 1311 dbSNP
rs1378861208 1313 dbSNP
rs568371565 1314 dbSNP
rs116016370 1316 dbSNP
rs764557435 1317 dbSNP
rs1235185598 1330 dbSNP
rs1013771305 1346 dbSNP
rs1331442091 1351 dbSNP
rs1305901731 1354 dbSNP
rs1294833394 1355 dbSNP
rs935561027 1356 dbSNP
rs528137879 1357 dbSNP
rs1380447110 1365 dbSNP
rs550099571 1374 dbSNP
rs1302324645 1376 dbSNP
rs758643828 1386 dbSNP
rs1055188707 1390 dbSNP
rs1231086044 1397 dbSNP
rs1255491012 1397 dbSNP
rs1340623050 1398 dbSNP
rs925550402 1404 dbSNP
rs1320653223 1418 dbSNP
rs570538584 1420 dbSNP
rs752380059 1421 dbSNP
rs1373173762 1423 dbSNP
rs929088245 1423 dbSNP
rs919103487 1425 dbSNP
rs1308927693 1431 dbSNP
rs1425127544 1433 dbSNP
rs969587360 1436 dbSNP
rs1295082365 1443 dbSNP
rs1369913018 1446 dbSNP
rs552280721 1453 dbSNP
rs1385339300 1455 dbSNP
rs916774141 1461 dbSNP
rs991245931 1464 dbSNP
rs1366080643 1465 dbSNP
rs1231256688 1467 dbSNP
rs764803767 1473 dbSNP
rs529718719 1475 dbSNP
rs530532930 1481 dbSNP
rs1173933620 1485 dbSNP
rs1321592134 1486 dbSNP
rs1342097330 1487 dbSNP
rs1479235502 1493 dbSNP
rs759061285 1500 dbSNP
rs910665985 1506 dbSNP
rs1267640681 1507 dbSNP
rs563054244 1508 dbSNP
rs544490629 1510 dbSNP
rs1448211598 1519 dbSNP
rs776186056 1528 dbSNP
rs977658356 1529 dbSNP
rs10409243 1532 dbSNP
rs1212026240 1544 dbSNP
rs562092502 1546 dbSNP
rs1347920613 1548 dbSNP
rs1460896815 1548 dbSNP
rs1026904548 1549 dbSNP
rs1014455157 1558 dbSNP
rs1024410157 1558 dbSNP
rs114818137 1558 dbSNP
rs139543274 1563 dbSNP
rs1365055495 1578 dbSNP
rs1229418541 1582 dbSNP
rs35699769 1589 dbSNP
rs1315249642 1606 dbSNP
rs1276823149 1618 dbSNP
rs1202375589 1627 dbSNP
rs1320336385 1631 dbSNP
rs1243608487 1632 dbSNP
rs899655203 1636 dbSNP
rs867765146 1641 dbSNP
rs1008293181 1642 dbSNP
rs1345523934 1651 dbSNP
rs1002240112 1654 dbSNP
rs891227965 1664 dbSNP
rs572936836 1665 dbSNP
rs1250553711 1674 dbSNP
rs1052356989 1681 dbSNP
rs935340273 1690 dbSNP
rs925501005 1693 dbSNP
rs1159586317 1696 dbSNP
rs1412892858 1697 dbSNP
rs1048977325 1710 dbSNP
rs1318568778 1717 dbSNP
rs1043953812 1718 dbSNP
rs1388063008 1725 dbSNP
rs1449359444 1727 dbSNP
rs929224053 1728 dbSNP
rs897768951 1734 dbSNP
rs1451326501 1752 dbSNP
rs948339355 1763 dbSNP
rs1330720873 1772 dbSNP
rs916742305 1773 dbSNP
rs35309986 1774 dbSNP
rs147221266 1777 dbSNP
rs1167714547 1778 dbSNP
rs1235611528 1794 dbSNP
rs938336513 1801 dbSNP
rs188305573 1805 dbSNP
rs1482890727 1808 dbSNP
rs143696275 1814 dbSNP
rs74178202 1815 dbSNP
rs1157269985 1818 dbSNP
rs951022929 1819 dbSNP
rs1444139431 1823 dbSNP
rs773003554 1824 dbSNP
rs1357865254 1828 dbSNP
rs1308960575 1832 dbSNP
rs527414492 1834 dbSNP
rs1407578307 1835 dbSNP
rs964327108 1847 dbSNP
rs1018083302 1848 dbSNP
rs1008491311 1852 dbSNP
rs535686311 1856 dbSNP
rs1275937022 1860 dbSNP
rs891175453 1865 dbSNP
rs1031046581 1867 dbSNP
rs574780173 1868 dbSNP
rs1275319943 1880 dbSNP
rs1245132609 1888 dbSNP
rs1481989156 1889 dbSNP
rs1180271378 1899 dbSNP
rs1353727157 1901 dbSNP
rs577624437 1903 dbSNP
rs534582935 1932 dbSNP
rs1448055290 1934 dbSNP
rs771920403 1938 dbSNP
rs1478481809 1940 dbSNP
rs1334829643 1943 dbSNP
rs570426482 1946 dbSNP
rs34208381 1947 dbSNP
rs903856610 1950 dbSNP
rs551891263 1951 dbSNP
rs1282345102 1953 dbSNP
rs1434615394 1954 dbSNP
rs1169824999 1957 dbSNP
rs1372790217 1958 dbSNP
rs1408429794 1959 dbSNP
rs1372775029 1963 dbSNP
rs1428281608 1968 dbSNP
rs55818584 1973 dbSNP
rs948313752 1992 dbSNP
rs1438201526 1995 dbSNP
rs993404120 1999 dbSNP
rs958906622 2000 dbSNP
rs1412184543 2008 dbSNP
rs139477595 2009 dbSNP
rs1056608985 2015 dbSNP
rs939509884 2017 dbSNP
rs1001965869 2021 dbSNP
rs951666956 2023 dbSNP
rs1245020341 2027 dbSNP
rs908078680 2030 dbSNP
rs372070428 2032 dbSNP
rs1027303966 2033 dbSNP
rs775855539 2033 dbSNP
rs777202046 2033 dbSNP
rs1040329611 2035 dbSNP
rs1321254613 2035 dbSNP
rs1009106589 2037 dbSNP
rs888968220 2038 dbSNP
rs1321976623 2040 dbSNP
rs1227600021 2042 dbSNP
rs1362894168 2042 dbSNP
rs551152975 2042 dbSNP
rs1483944859 2043 dbSNP
rs919572585 2044 dbSNP
rs974163730 2045 dbSNP
rs76167553 2046 dbSNP
rs372293542 2047 dbSNP
rs986612140 2048 dbSNP
rs546472499 2049 dbSNP
rs147346249 2050 dbSNP
rs959096681 2051 dbSNP
rs1161844384 2052 dbSNP
rs927500038 2052 dbSNP
rs1457469050 2056 dbSNP
rs1160674336 2063 dbSNP
rs115321277 2064 dbSNP
rs746075189 2065 dbSNP
rs1334826140 2067 dbSNP
rs1342026563 2072 dbSNP
rs951762529 2085 dbSNP
rs1283416612 2088 dbSNP
rs1334381737 2089 dbSNP
rs368234473 2090 dbSNP
rs1027439280 2091 dbSNP
rs528782647 2091 dbSNP
rs993159649 2100 dbSNP
rs895367757 2102 dbSNP
rs781399611 2103 dbSNP
rs961738628 2115 dbSNP
rs1407327308 2127 dbSNP
rs564458518 2129 dbSNP
rs886591968 2136 dbSNP
rs1409119134 2138 dbSNP
rs1047945944 2142 dbSNP
rs929685684 2145 dbSNP
rs919683493 2150 dbSNP
rs1390302280 2155 dbSNP
rs545886602 2156 dbSNP
rs575682796 2163 dbSNP
rs1350930124 2167 dbSNP
rs1473696657 2176 dbSNP
rs111640725 2180 dbSNP
rs1290506714 2181 dbSNP
rs1348878404 2185 dbSNP
rs563677819 2192 dbSNP
rs1008835650 2199 dbSNP
rs1412904026 2200 dbSNP
rs889055228 2201 dbSNP
rs1198453139 2205 dbSNP
rs1050257730 2212 dbSNP
rs1483624113 2223 dbSNP
rs1206834531 2224 dbSNP
rs910927820 2232 dbSNP
rs542021716 2247 dbSNP
rs986673516 2251 dbSNP
rs955321620 2258 dbSNP
rs923758324 2259 dbSNP
rs73015122 2263 dbSNP
rs968078166 2286 dbSNP
rs1476984923 2287 dbSNP
rs904616677 2289 dbSNP
rs1041788442 2290 dbSNP
rs868478415 2293 dbSNP
rs777849554 2294 dbSNP
rs946018686 2300 dbSNP
rs79481092 2303 dbSNP
rs959626666 2304 dbSNP
rs1232735062 2305 dbSNP
rs937587904 2306 dbSNP
rs1035055385 2307 dbSNP
rs1282198872 2308 dbSNP
rs1272970379 2315 dbSNP
rs927563013 2316 dbSNP
rs1219050794 2320 dbSNP
rs1210107454 2323 dbSNP
rs1268842019 2324 dbSNP
rs1003777530 2333 dbSNP
rs1449435902 2338 dbSNP
rs1192482659 2340 dbSNP
rs1390642623 2344 dbSNP
rs1451290559 2346 dbSNP
rs886707793 2354 dbSNP
rs377146753 2355 dbSNP
rs1277172411 2362 dbSNP
rs995011940 2364 dbSNP
rs1294407632 2367 dbSNP
rs1392953650 2378 dbSNP
rs931508308 2382 dbSNP
rs143790225 2383 dbSNP
rs778103329 2391 dbSNP
rs149404755 2396 dbSNP
rs558518703 2397 dbSNP
rs1245053986 2401 dbSNP
rs770223204 2411 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 9294.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000590320.1 | 3UTR | ACAGGGUUUCACUACGUUGGCCAGGCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
150 hsa-miR-6818-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT112122 TIMM17A translocase of inner mitochondrial membrane 17A 2 6
MIRT262243 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT446689 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT449923 TPST2 tyrosylprotein sulfotransferase 2 2 2
MIRT464356 USP12P1 ubiquitin specific peptidase 12 pseudogene 1 2 2
MIRT485703 CBX7 chromobox 7 2 2
MIRT497478 XPR1 xenotropic and polytropic retrovirus receptor 1 2 4
MIRT499435 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT514246 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT515032 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515065 PLA2G2C phospholipase A2 group IIC 2 2
MIRT520235 USP9X ubiquitin specific peptidase 9, X-linked 2 4
MIRT523685 FHL2 four and a half LIM domains 2 2 4
MIRT525524 FSIP2 fibrous sheath interacting protein 2 2 2
MIRT525838 FAR2 fatty acyl-CoA reductase 2 2 2
MIRT528583 PTGER3 prostaglandin E receptor 3 2 2
MIRT530404 SULT1B1 sulfotransferase family 1B member 1 2 2
MIRT530703 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT535118 PLSCR4 phospholipid scramblase 4 2 2
MIRT539880 IRGQ immunity related GTPase Q 2 2
MIRT540195 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT540938 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541501 TOR1AIP1 torsin 1A interacting protein 1 2 2
MIRT542544 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542559 ZNF280B zinc finger protein 280B 2 2
MIRT542689 RPS15A ribosomal protein S15a 2 2
MIRT548759 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT549735 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT553060 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT556303 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT560816 DIP2A disco interacting protein 2 homolog A 2 2
MIRT567455 GLTSCR1 BRD4 interacting chromatin remodeling complex associated protein 2 2
MIRT575143 Cd93 CD93 antigen 2 2
MIRT607217 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607286 CD300E CD300e molecule 2 6
MIRT607302 RREB1 ras responsive element binding protein 1 2 6
MIRT608645 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT611095 MYO1F myosin IF 2 4
MIRT611576 CLEC4D C-type lectin domain family 4 member D 2 2
MIRT614271 WSCD2 WSC domain containing 2 2 2
MIRT614855 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT617114 KANK2 KN motif and ankyrin repeat domains 2 2 2
MIRT618002 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT618028 CTU1 cytosolic thiouridylase subunit 1 2 2
MIRT619062 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619289 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619356 CFHR5 complement factor H related 5 2 2
MIRT620725 CCL16 C-C motif chemokine ligand 16 2 2
MIRT620913 LRRTM2 leucine rich repeat transmembrane neuronal 2 2 2
MIRT621902 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT622025 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622556 PTPN3 protein tyrosine phosphatase, non-receptor type 3 2 2
MIRT623137 NCKAP1 NCK associated protein 1 2 2
MIRT623140 NAV2 neuron navigator 2 2 2
MIRT623701 HHAT hedgehog acyltransferase 2 2
MIRT624602 B3GALT5 beta-1,3-galactosyltransferase 5 2 2
MIRT625944 OLIG3 oligodendrocyte transcription factor 3 2 2
MIRT625988 SPATA17 spermatogenesis associated 17 2 2
MIRT628028 LSAMP limbic system-associated membrane protein 2 2
MIRT635521 MC2R melanocortin 2 receptor 2 2
MIRT638916 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT639796 EPX eosinophil peroxidase 2 2
MIRT640344 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT644806 VLDLR very low density lipoprotein receptor 2 2
MIRT645303 AGTRAP angiotensin II receptor associated protein 2 2
MIRT645629 SYTL4 synaptotagmin like 4 2 2
MIRT645683 TBC1D13 TBC1 domain family member 13 2 2
MIRT646216 DUSP10 dual specificity phosphatase 10 2 2
MIRT648505 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT649748 UTP20 UTP20, small subunit processome component 2 2
MIRT649797 CLEC2D C-type lectin domain family 2 member D 2 2
MIRT650482 UFM1 ubiquitin fold modifier 1 2 2
MIRT653199 SP9 Sp9 transcription factor 2 2
MIRT655741 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT659978 C2CD2L C2CD2 like 2 2
MIRT660350 BAG4 BCL2 associated athanogene 4 2 2
MIRT662185 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT663290 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT666817 PRCP prolylcarboxypeptidase 2 2
MIRT671665 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT671838 PDE3A phosphodiesterase 3A 2 2
MIRT672193 F2 coagulation factor II, thrombin 2 2
MIRT673870 KLF2 Kruppel like factor 2 2 2
MIRT683563 CARD8 caspase recruitment domain family member 8 2 2
MIRT684545 ZNF708 zinc finger protein 708 2 2
MIRT685140 TACR3 tachykinin receptor 3 2 2
MIRT685413 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT686039 SLC5A5 solute carrier family 5 member 5 2 2
MIRT686126 B4GALT7 beta-1,4-galactosyltransferase 7 2 2
MIRT687473 NHLRC2 NHL repeat containing 2 2 2
MIRT687946 HHIP hedgehog interacting protein 2 2
MIRT688171 FRRS1 ferric chelate reductase 1 2 2
MIRT688295 FAM208A family with sequence similarity 208 member A 2 2
MIRT689044 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT689194 ZNF574 zinc finger protein 574 2 2
MIRT691253 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT695358 PHAX phosphorylated adaptor for RNA export 2 2
MIRT696674 APOC3 apolipoprotein C3 2 2
MIRT697358 ZNF394 zinc finger protein 394 2 2
MIRT697604 XIAP X-linked inhibitor of apoptosis 2 2
MIRT697726 USP6NL USP6 N-terminal like 2 2
MIRT697776 UBXN7 UBX domain protein 7 2 2
MIRT698478 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT698984 SPAG9 sperm associated antigen 9 2 2
MIRT699851 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT700172 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT704339 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT704589 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT705836 AHCY adenosylhomocysteinase 2 2
MIRT707085 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT707132 TRA2B transformer 2 beta homolog 2 2
MIRT707145 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT707234 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT707347 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT707445 PPFIBP1 PPFIA binding protein 1 2 2
MIRT707494 AXL AXL receptor tyrosine kinase 2 2
MIRT707638 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT707690 FAM118A family with sequence similarity 118 member A 2 2
MIRT707706 CDC6 cell division cycle 6 2 2
MIRT707817 TMEM170A transmembrane protein 170A 2 2
MIRT707957 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT707996 NUDT4 nudix hydrolase 4 2 2
MIRT708026 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT708058 LIX1L limb and CNS expressed 1 like 2 2
MIRT708089 KIAA1671 KIAA1671 2 2
MIRT708125 GK5 glycerol kinase 5 (putative) 2 2
MIRT708194 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT708201 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT710503 BSDC1 BSD domain containing 1 2 2
MIRT711308 IFNGR2 interferon gamma receptor 2 2 2
MIRT711740 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT713202 SOCS6 suppressor of cytokine signaling 6 2 2
MIRT714380 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT715210 NPVF neuropeptide VF precursor 2 2
MIRT715559 EPHB4 EPH receptor B4 2 2
MIRT715835 SZT2 SZT2, KICSTOR complex subunit 2 2
MIRT716680 HLA-B major histocompatibility complex, class I, B 2 2
MIRT717660 THBS2 thrombospondin 2 2 2
MIRT718132 PALM paralemmin 2 2
MIRT718322 METTL7A methyltransferase like 7A 2 2
MIRT720693 RNF217 ring finger protein 217 2 2
MIRT720727 ELOVL7 ELOVL fatty acid elongase 7 2 2
MIRT721376 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT721983 FAM214B family with sequence similarity 214 member B 2 2
MIRT722163 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT722881 MOB3A MOB kinase activator 3A 2 2
MIRT723218 FMNL3 formin like 3 2 2
MIRT723788 MUC17 mucin 17, cell surface associated 2 2
MIRT724093 TMEM199 transmembrane protein 199 2 2
MIRT725265 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6818-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-6818-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-6818-3p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)

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