miRTarBase - #MIRT514761


—
pre-miRNA Information
pre-miRNA hsa-mir-7107   
Genomic Coordinates chr12: 121444273 - 121444352
Description Homo sapiens miR-7107 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7107-5p
Sequence 6| UCGGCCUGGGGAGGAGGAAGGG |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782634189 2 dbSNP
rs782536354 3 dbSNP
rs1230027540 4 dbSNP
rs539127530 5 dbSNP
rs782765349 9 dbSNP
rs55671311 10 dbSNP
rs183760300 11 dbSNP
rs782805318 12 dbSNP
rs782108772 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RBM4B   
Synonyms RBM30, RBM4L, ZCCHC15, ZCCHC21B, ZCRB3B
Description RNA binding motif protein 4B
Transcript NM_031492   
Expression
Putative miRNA Targets on RBM4B
3'UTR of RBM4B
(miRNA target sites are highlighted)		 
>RBM4B|NM_031492|3'UTR
   1 AAACTGGAGGTAGGATAATTGCGGACTGAACCCTCGGGCTGCGGTCATATATGAGAACTTGCTCCGCGCGGTCCCCTTTG
  81 CCGGGATGTTTCCATTGCTTCATGTTTCAGTAAACAAAAGGAGTTTGTGACCAACTATGTTTTCTTTCTTAATTCTTCTA
 161 AGTTGACTTTTCTTTCCTCCTGAAACTAGTCTCTGTAGCCTTTCACTCTGTTCCTTATATTCTCAGCCTCTGAGCAGCCC
 241 TAGGTAAGGATTATGCTGGCATCCCCTTTTTCCTGTGCAGTGGAACCCCTCTTATCTTGCTTTCCCTAGGAGTTGAATCC
 321 TTCTCCCTGCCTACCTGCAGCATCTCCTTTCCCTTTAAAATGACCATGTAGTGGCAAGCAGCCTTTTACTCTTCTGTTAG
 401 CTCTGGACTCTTAACACTTAAGTTACTCTTCTGAAATTGCTAGGACCATTGGGGGTTTTGTTGTTTTGTTTGTTTTTTAT
 481 GTCCGACCTGTGATCGTGGTACAGCATTAGCTGAAATTTACCCTTGTTTTACTCCACTCCTCCCTTTTTTAAAAAAATTT
 561 TTTGACAAATAAATGTTTCTAACACTTAAATATC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gggaaggaggaGGGGUCCGGCu 5'
                     ||:|:|||:| 
Target 5' gcggactgaacCCTCGGGCTGc 3'
 21 - 42 119.00 -17.70
2 
miRNA  3' gggaAGGAGGAGGGGUCCGGCu 5'
              ||| |:|: ||:|| :| 
Target 5' gcggTCCCCTTTGCCGGGATGt 3'
 68 - 89 102.00 -18.60
3 
miRNA  3' gggaAGGAGGAGG--GGUCCGGcu 5'
              ||  ||||:   ||| ||  
Target 5' attcTCAGCCTCTGAGCAGCCCta 3'
 219 - 242 100.00 -15.02
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20983429 14 COSMIC
COSN22322614 103 COSMIC
COSN20983669 114 COSMIC
COSN29287043 128 COSMIC
COSN20983668 140 COSMIC
COSN8688223 431 COSMIC
COSN20497505 1084 COSMIC
COSN8688222 1190 COSMIC
COSN6610923 2110 COSMIC
COSN20077513 2481 COSMIC
COSN31659911 2681 COSMIC
COSN20048803 2691 COSMIC
COSN1136548 2793 COSMIC
COSN7017337 2804 COSMIC
COSN30621074 2822 COSMIC
COSN20041812 2941 COSMIC
COSN17781873 2948 COSMIC
COSN30747871 2948 COSMIC
COSN19729983 2949 COSMIC
COSN30647076 2949 COSMIC
COSN19693192 2955 COSMIC
COSN1136547 2988 COSMIC
COSN31556776 3059 COSMIC
COSN8282825 3066 COSMIC
COSN30691587 3131 COSMIC
COSN31520265 3185 COSMIC
COSN8282824 3267 COSMIC
COSN9031565 3273 COSMIC
COSN31531005 3320 COSMIC
COSN17563574 3586 COSMIC
COSN26403912 3594 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs565580785 2 dbSNP
rs1329813655 5 dbSNP
rs749516750 7 dbSNP
rs1226024550 10 dbSNP
rs1344298906 12 dbSNP
rs1376584255 13 dbSNP
rs1298025624 14 dbSNP
rs1218500458 23 dbSNP
rs376202667 29 dbSNP
rs545787285 34 dbSNP
rs368439506 35 dbSNP
rs1294859957 37 dbSNP
rs1342997151 38 dbSNP
rs764896197 42 dbSNP
rs1436749845 44 dbSNP
rs759254219 46 dbSNP
rs780429303 47 dbSNP
rs1218649985 48 dbSNP
rs1277843098 48 dbSNP
rs753564329 49 dbSNP
rs1205454794 53 dbSNP
rs532179892 55 dbSNP
rs1457117983 56 dbSNP
rs1486688388 71 dbSNP
rs899764655 74 dbSNP
rs1476763959 76 dbSNP
rs563215931 85 dbSNP
rs1171546105 87 dbSNP
rs529505702 89 dbSNP
rs543552962 91 dbSNP
rs1471265386 94 dbSNP
rs1227467774 97 dbSNP
rs1326611867 103 dbSNP
rs1284691870 104 dbSNP
rs185795134 105 dbSNP
rs79574230 107 dbSNP
rs1301116893 109 dbSNP
rs540832097 124 dbSNP
rs1275561055 128 dbSNP
rs930064021 131 dbSNP
rs1225300735 140 dbSNP
rs571984221 151 dbSNP
rs1256038458 152 dbSNP
rs1317076772 155 dbSNP
rs1387675890 164 dbSNP
rs778319200 175 dbSNP
rs1456953801 181 dbSNP
rs919978277 202 dbSNP
rs1386679555 203 dbSNP
rs1038386563 205 dbSNP
rs937316758 220 dbSNP
rs1377007139 223 dbSNP
rs1481103130 225 dbSNP
rs754633329 226 dbSNP
rs564010921 233 dbSNP
rs927300335 235 dbSNP
rs982131303 238 dbSNP
rs1466479497 243 dbSNP
rs1170060761 246 dbSNP
rs1388991434 256 dbSNP
rs1405044409 258 dbSNP
rs375222638 262 dbSNP
rs1347505004 267 dbSNP
rs913444568 279 dbSNP
rs988942393 284 dbSNP
rs35576901 300 dbSNP
rs956454932 313 dbSNP
rs1252894549 315 dbSNP
rs1353963895 317 dbSNP
rs1208892734 321 dbSNP
rs1207842252 327 dbSNP
rs1032069182 337 dbSNP
rs538629763 337 dbSNP
rs1463291757 339 dbSNP
rs1261815261 342 dbSNP
rs1264559021 349 dbSNP
rs1478470885 350 dbSNP
rs779373266 351 dbSNP
rs755653182 374 dbSNP
rs1472653002 378 dbSNP
rs181380872 379 dbSNP
rs1367622430 401 dbSNP
rs1418086698 412 dbSNP
rs1297737968 417 dbSNP
rs12364617 422 dbSNP
rs1382757277 423 dbSNP
rs749967466 425 dbSNP
rs1017931379 427 dbSNP
rs1253736462 428 dbSNP
rs1008600980 429 dbSNP
rs1315324740 435 dbSNP
rs1361225100 445 dbSNP
rs1213995566 446 dbSNP
rs1284754670 453 dbSNP
rs745357173 469 dbSNP
rs1254611610 470 dbSNP
rs1328684364 470 dbSNP
rs1423612084 479 dbSNP
rs1188755178 480 dbSNP
rs891003180 486 dbSNP
rs1434765091 487 dbSNP
rs767427045 492 dbSNP
rs761781794 493 dbSNP
rs1455373332 494 dbSNP
rs1290565353 500 dbSNP
rs751316394 507 dbSNP
rs1399900906 508 dbSNP
rs993933361 509 dbSNP
rs1337220826 515 dbSNP
rs1384680847 524 dbSNP
rs7120560 532 dbSNP
rs1308031665 536 dbSNP
rs11227567 540 dbSNP
rs1253729415 541 dbSNP
rs763899633 550 dbSNP
rs937430792 552 dbSNP
rs191369877 579 dbSNP
rs1045732298 585 dbSNP
rs144064501 587 dbSNP
rs186491146 588 dbSNP
rs1420966674 590 dbSNP
rs1174117244 591 dbSNP
rs571934729 593 dbSNP
rs913455945 609 dbSNP
rs1177015197 638 dbSNP
rs988994732 646 dbSNP
rs1444227232 662 dbSNP
rs375740007 670 dbSNP
rs552131792 671 dbSNP
rs1392771005 681 dbSNP
rs781058030 684 dbSNP
rs181858265 687 dbSNP
rs1224685266 693 dbSNP
rs926127800 694 dbSNP
rs1316449861 701 dbSNP
rs979625199 709 dbSNP
rs563337212 715 dbSNP
rs188982241 719 dbSNP
rs1481778860 725 dbSNP
rs1144791 737 dbSNP
rs1189658671 747 dbSNP
rs1018359893 767 dbSNP
rs1200072935 769 dbSNP
rs1344967133 769 dbSNP
rs1431280191 774 dbSNP
rs1169781565 793 dbSNP
rs1463991402 793 dbSNP
rs1354868189 799 dbSNP
rs1463246804 809 dbSNP
rs1291382460 812 dbSNP
rs1163045110 815 dbSNP
rs368273425 819 dbSNP
rs775789245 823 dbSNP
rs1404957394 826 dbSNP
rs1285766774 827 dbSNP
rs986448357 832 dbSNP
rs1218555554 834 dbSNP
rs1274192596 836 dbSNP
rs1309606086 836 dbSNP
rs955305686 847 dbSNP
rs1025492407 849 dbSNP
rs879497042 853 dbSNP
rs1224900698 860 dbSNP
rs1228133584 863 dbSNP
rs1340571213 867 dbSNP
rs1185837812 871 dbSNP
rs994028206 874 dbSNP
rs184993876 881 dbSNP
rs1162262300 886 dbSNP
rs1340067043 887 dbSNP
rs1332305814 888 dbSNP
rs1304497538 889 dbSNP
rs1358036046 900 dbSNP
rs1212754814 902 dbSNP
rs374146207 903 dbSNP
rs139034627 907 dbSNP
rs61890409 908 dbSNP
rs1167809138 909 dbSNP
rs866679024 910 dbSNP
rs75184787 911 dbSNP
rs762628258 911 dbSNP
rs905910077 915 dbSNP
rs1046158006 919 dbSNP
rs950005299 922 dbSNP
rs1373312931 926 dbSNP
rs763352485 926 dbSNP
rs891781982 926 dbSNP
rs1472283947 927 dbSNP
rs513599 935 dbSNP
rs1384371029 937 dbSNP
rs1235338561 939 dbSNP
rs1444902531 941 dbSNP
rs1165059454 943 dbSNP
rs765447996 946 dbSNP
rs1053393319 947 dbSNP
rs936229010 955 dbSNP
rs759651216 970 dbSNP
rs560844082 972 dbSNP
rs1250419812 985 dbSNP
rs181815000 987 dbSNP
rs1205150687 991 dbSNP
rs1446461859 992 dbSNP
rs974898729 999 dbSNP
rs139194783 1003 dbSNP
rs564812898 1011 dbSNP
rs1248475459 1023 dbSNP
rs188312930 1027 dbSNP
rs776626469 1028 dbSNP
rs910945692 1032 dbSNP
rs1286413770 1044 dbSNP
rs1355936980 1046 dbSNP
rs1318729827 1047 dbSNP
rs72923085 1050 dbSNP
rs955066789 1052 dbSNP
rs1461561722 1058 dbSNP
rs1185081515 1065 dbSNP
rs1230305359 1067 dbSNP
rs1235919872 1069 dbSNP
rs1469298711 1074 dbSNP
rs747547898 1077 dbSNP
rs1409497996 1091 dbSNP
rs1413315569 1094 dbSNP
rs556480345 1104 dbSNP
rs1025252270 1105 dbSNP
rs536253355 1117 dbSNP
rs773659495 1119 dbSNP
rs377186221 1128 dbSNP
rs962657852 1138 dbSNP
rs1376511630 1140 dbSNP
rs1443197585 1146 dbSNP
rs1281386173 1150 dbSNP
rs1017184674 1155 dbSNP
rs1217426239 1164 dbSNP
rs1262385084 1165 dbSNP
rs1001344170 1176 dbSNP
rs905958887 1184 dbSNP
rs1024414331 1189 dbSNP
rs1436908721 1192 dbSNP
rs1014334235 1194 dbSNP
rs1234137777 1196 dbSNP
rs772938364 1199 dbSNP
rs772573508 1200 dbSNP
rs1476733951 1204 dbSNP
rs1430535744 1205 dbSNP
rs1471233786 1213 dbSNP
rs777659771 1217 dbSNP
rs1396187119 1220 dbSNP
rs575466632 1223 dbSNP
rs1410786657 1226 dbSNP
rs891835063 1229 dbSNP
rs372833572 1230 dbSNP
rs879850573 1234 dbSNP
rs1283990472 1238 dbSNP
rs1053106134 1244 dbSNP
rs1411188289 1252 dbSNP
rs1276127072 1262 dbSNP
rs936240176 1272 dbSNP
rs1196049433 1281 dbSNP
rs184100043 1283 dbSNP
rs866336383 1284 dbSNP
rs1274597680 1298 dbSNP
rs1449392554 1308 dbSNP
rs904739490 1325 dbSNP
rs1268970483 1329 dbSNP
rs534371327 1335 dbSNP
rs1192095108 1342 dbSNP
rs1372888510 1344 dbSNP
rs1410652627 1351 dbSNP
rs1169873880 1353 dbSNP
rs1388922106 1357 dbSNP
rs1424259908 1360 dbSNP
rs1303881766 1362 dbSNP
rs779751858 1365 dbSNP
rs1406722515 1369 dbSNP
rs1316087339 1370 dbSNP
rs1325648571 1372 dbSNP
rs755780040 1374 dbSNP
rs571916424 1376 dbSNP
rs745359906 1377 dbSNP
rs1271699504 1378 dbSNP
rs552095178 1381 dbSNP
rs1353900055 1382 dbSNP
rs1244748957 1383 dbSNP
rs1039622942 1385 dbSNP
rs192702232 1391 dbSNP
rs912030200 1393 dbSNP
rs1261560705 1399 dbSNP
rs1447950072 1404 dbSNP
rs1195865374 1405 dbSNP
rs1367057626 1407 dbSNP
rs1248909318 1413 dbSNP
rs1222784036 1426 dbSNP
rs1387195683 1428 dbSNP
rs1417867437 1445 dbSNP
rs1287063339 1455 dbSNP
rs780714029 1465 dbSNP
rs757138682 1466 dbSNP
rs1451324666 1470 dbSNP
rs1288158156 1480 dbSNP
rs1210882371 1481 dbSNP
rs1320091046 1485 dbSNP
rs563571701 1485 dbSNP
rs1380276238 1489 dbSNP
rs1451488569 1492 dbSNP
rs1330058300 1497 dbSNP
rs1287854138 1502 dbSNP
rs1226606870 1518 dbSNP
rs1360977075 1519 dbSNP
rs1050831397 1523 dbSNP
rs1259627480 1527 dbSNP
rs1352091763 1529 dbSNP
rs1207390598 1533 dbSNP
rs569456113 1541 dbSNP
rs933735733 1544 dbSNP
rs918293011 1549 dbSNP
rs1347963644 1552 dbSNP
rs751512467 1553 dbSNP
rs962957575 1562 dbSNP
rs1438052520 1575 dbSNP
rs370556897 1578 dbSNP
rs1457482194 1589 dbSNP
rs1032748668 1592 dbSNP
rs1160177588 1593 dbSNP
rs1403668587 1606 dbSNP
rs546250920 1610 dbSNP
rs549723914 1613 dbSNP
rs978472930 1616 dbSNP
rs868651820 1618 dbSNP
rs1387409205 1624 dbSNP
rs188127015 1626 dbSNP
rs1384614579 1631 dbSNP
rs1481096784 1634 dbSNP
rs1427869707 1636 dbSNP
rs980406090 1637 dbSNP
rs1477980034 1653 dbSNP
rs561438 1656 dbSNP
rs969944056 1670 dbSNP
rs1024135504 1676 dbSNP
rs1190873283 1677 dbSNP
rs1323290525 1682 dbSNP
rs1465538828 1692 dbSNP
rs1014386656 1695 dbSNP
rs1176811868 1696 dbSNP
rs1370686685 1696 dbSNP
rs1479802693 1696 dbSNP
rs369524236 1697 dbSNP
rs1206909736 1703 dbSNP
rs1314088888 1711 dbSNP
rs1183905701 1712 dbSNP
rs1297213345 1714 dbSNP
rs1408006130 1714 dbSNP
rs1427041341 1714 dbSNP
rs1469214493 1714 dbSNP
rs574932627 1714 dbSNP
rs956069245 1724 dbSNP
rs1031684245 1732 dbSNP
rs1280794597 1735 dbSNP
rs561224 1738 dbSNP
rs763810275 1742 dbSNP
rs113748956 1746 dbSNP
rs557688264 1749 dbSNP
rs1365370463 1763 dbSNP
rs1224626798 1764 dbSNP
rs1285636999 1771 dbSNP
rs541686927 1775 dbSNP
rs1306076554 1781 dbSNP
rs1204128999 1782 dbSNP
rs758294504 1792 dbSNP
rs1252037426 1793 dbSNP
rs904791255 1801 dbSNP
rs1039312240 1802 dbSNP
rs758213070 1814 dbSNP
rs1268261618 1816 dbSNP
rs1435487468 1819 dbSNP
rs1364021462 1826 dbSNP
rs1008212975 1830 dbSNP
rs1431208003 1833 dbSNP
rs1426453665 1841 dbSNP
rs535063307 1842 dbSNP
rs1373352047 1844 dbSNP
rs574565353 1845 dbSNP
rs148694696 1848 dbSNP
rs1364381782 1853 dbSNP
rs1406115423 1867 dbSNP
rs761006516 1868 dbSNP
rs547116296 1872 dbSNP
rs933747097 1875 dbSNP
rs1360319078 1889 dbSNP
rs1214287054 1891 dbSNP
rs765478154 1903 dbSNP
rs553150822 1910 dbSNP
rs1309552539 1920 dbSNP
rs1423634977 1921 dbSNP
rs1490523713 1933 dbSNP
rs1170899453 1936 dbSNP
rs1450408258 1944 dbSNP
rs1247794030 1945 dbSNP
rs1248328175 1946 dbSNP
rs1484845630 1950 dbSNP
rs115156643 1958 dbSNP
rs941057254 1963 dbSNP
rs1450994522 1967 dbSNP
rs1161228306 1971 dbSNP
rs1384103532 1974 dbSNP
rs1484347543 1977 dbSNP
rs1166027541 1978 dbSNP
rs1344004527 1981 dbSNP
rs1238167864 1983 dbSNP
rs1289857456 1987 dbSNP
rs909523922 2001 dbSNP
rs1450768772 2009 dbSNP
rs1314553761 2011 dbSNP
rs1360280537 2015 dbSNP
rs1248338909 2018 dbSNP
rs1310395323 2024 dbSNP
rs1315101351 2024 dbSNP
rs980075963 2033 dbSNP
rs1242508252 2034 dbSNP
rs1228868137 2042 dbSNP
rs970375162 2043 dbSNP
rs917089233 2059 dbSNP
rs564777865 2065 dbSNP
rs1341277444 2080 dbSNP
rs1183163875 2085 dbSNP
rs992625958 2088 dbSNP
rs759719301 2090 dbSNP
rs956121376 2096 dbSNP
rs544810845 2101 dbSNP
rs1397466060 2102 dbSNP
rs1000670481 2126 dbSNP
rs968777778 2140 dbSNP
rs776810785 2143 dbSNP
rs1383892770 2146 dbSNP
rs1454757520 2159 dbSNP
rs1445108806 2163 dbSNP
rs1018015052 2168 dbSNP
rs1372633084 2172 dbSNP
rs1223176805 2180 dbSNP
rs1284782496 2182 dbSNP
rs1330962121 2183 dbSNP
rs1171113832 2201 dbSNP
rs1262273199 2204 dbSNP
rs766586313 2223 dbSNP
rs1430942642 2231 dbSNP
rs1211769253 2242 dbSNP
rs144112838 2242 dbSNP
rs1051890057 2246 dbSNP
rs1168742302 2250 dbSNP
rs993599421 2252 dbSNP
rs544137049 2266 dbSNP
rs1414746222 2269 dbSNP
rs772519870 2273 dbSNP
rs1479742519 2274 dbSNP
rs1036768427 2278 dbSNP
rs143632548 2280 dbSNP
rs34617201 2286 dbSNP
rs1181371637 2292 dbSNP
rs74731917 2302 dbSNP
rs888157537 2310 dbSNP
rs1044413182 2323 dbSNP
rs1281334701 2334 dbSNP
rs1352333178 2339 dbSNP
rs1254059019 2343 dbSNP
rs1282450702 2346 dbSNP
rs1323928042 2347 dbSNP
rs1205852127 2353 dbSNP
rs1270377905 2360 dbSNP
rs1436849321 2363 dbSNP
rs948672509 2367 dbSNP
rs917142750 2372 dbSNP
rs992679667 2372 dbSNP
rs934504633 2373 dbSNP
rs72923084 2382 dbSNP
rs978903670 2385 dbSNP
rs1419143257 2389 dbSNP
rs969207155 2399 dbSNP
rs1363763984 2402 dbSNP
rs1226255612 2407 dbSNP
rs1255762831 2407 dbSNP
rs1200103295 2408 dbSNP
rs774625902 2409 dbSNP
rs986504775 2410 dbSNP
rs776131611 2413 dbSNP
rs1411017725 2414 dbSNP
rs954973002 2419 dbSNP
rs1331490818 2421 dbSNP
rs1030518893 2426 dbSNP
rs898029946 2429 dbSNP
rs1016840313 2430 dbSNP
rs1005301733 2443 dbSNP
rs554305599 2465 dbSNP
rs534331163 2466 dbSNP
rs888158609 2468 dbSNP
rs1191565322 2470 dbSNP
rs1241860194 2471 dbSNP
rs578152497 2476 dbSNP
rs558339266 2477 dbSNP
rs1170663874 2489 dbSNP
rs1044080117 2509 dbSNP
rs1350694663 2517 dbSNP
rs769449988 2519 dbSNP
rs1388418382 2522 dbSNP
rs879175530 2526 dbSNP
rs1474339739 2528 dbSNP
rs538079076 2533 dbSNP
rs1435405069 2545 dbSNP
rs1182947793 2546 dbSNP
rs1356657570 2548 dbSNP
rs1244676316 2549 dbSNP
rs558599631 2551 dbSNP
rs1359125996 2561 dbSNP
rs569502634 2566 dbSNP
rs117591434 2567 dbSNP
rs570978853 2571 dbSNP
rs910599879 2584 dbSNP
rs986170135 2584 dbSNP
rs867080495 2587 dbSNP
rs1264625140 2597 dbSNP
rs954736434 2601 dbSNP
rs1030279868 2602 dbSNP
rs972326087 2603 dbSNP
rs753851535 2605 dbSNP
rs1459404889 2611 dbSNP
rs962228832 2612 dbSNP
rs1016439211 2617 dbSNP
rs1414531356 2617 dbSNP
rs1173391508 2624 dbSNP
rs1431748406 2626 dbSNP
rs1457519488 2626 dbSNP
rs1427704215 2628 dbSNP
rs1322280956 2629 dbSNP
rs1380202975 2638 dbSNP
rs1191952457 2640 dbSNP
rs138074713 2643 dbSNP
rs766061768 2644 dbSNP
rs1207434685 2648 dbSNP
rs1341688226 2653 dbSNP
rs888221055 2665 dbSNP
rs756764534 2667 dbSNP
rs1275331573 2668 dbSNP
rs1209349703 2671 dbSNP
rs1330413632 2676 dbSNP
rs1211046203 2678 dbSNP
rs1310146982 2681 dbSNP
rs760474140 2683 dbSNP
rs1219395251 2685 dbSNP
rs1349547310 2688 dbSNP
rs766605093 2698 dbSNP
rs866420462 2713 dbSNP
rs1285873194 2714 dbSNP
rs1411195308 2716 dbSNP
rs147402658 2717 dbSNP
rs1258394163 2719 dbSNP
rs1302712111 2720 dbSNP
rs1417330498 2721 dbSNP
rs1465011626 2722 dbSNP
rs143939117 2727 dbSNP
rs895518213 2734 dbSNP
rs761755512 2735 dbSNP
rs1410123357 2738 dbSNP
rs1184426082 2748 dbSNP
rs1472924118 2752 dbSNP
rs1403604786 2754 dbSNP
rs1468989651 2757 dbSNP
rs1056816308 2758 dbSNP
rs1256901287 2762 dbSNP
rs1389238050 2770 dbSNP
rs775535254 2775 dbSNP
rs1482246488 2780 dbSNP
rs773598045 2785 dbSNP
rs1257517252 2786 dbSNP
rs1485868077 2788 dbSNP
rs527343227 2789 dbSNP
rs767967898 2790 dbSNP
rs1328041640 2794 dbSNP
rs1281800747 2799 dbSNP
rs1265789205 2801 dbSNP
rs903066031 2806 dbSNP
rs578238032 2811 dbSNP
rs201657088 2815 dbSNP
rs571011020 2824 dbSNP
rs1257924207 2827 dbSNP
rs1479771318 2836 dbSNP
rs1191475360 2840 dbSNP
rs551131421 2840 dbSNP
rs1050974816 2842 dbSNP
rs1483367506 2844 dbSNP
rs1184193179 2845 dbSNP
rs933402624 2846 dbSNP
rs923275492 2848 dbSNP
rs1465994416 2851 dbSNP
rs1176348846 2857 dbSNP
rs1268309038 2858 dbSNP
rs972003601 2860 dbSNP
rs878899071 2864 dbSNP
rs1207566169 2870 dbSNP
rs962281830 2872 dbSNP
rs1326553071 2873 dbSNP
rs1257226327 2879 dbSNP
rs909430648 2890 dbSNP
rs1236128180 2892 dbSNP
rs985041763 2892 dbSNP
rs1345293215 2907 dbSNP
rs1387762434 2912 dbSNP
rs758319142 2912 dbSNP
rs1303853218 2926 dbSNP
rs1306019735 2927 dbSNP
rs969989428 2932 dbSNP
rs1207214044 2940 dbSNP
rs576258650 2940 dbSNP
rs1266613615 2946 dbSNP
rs1012711808 2947 dbSNP
rs531421945 2948 dbSNP
rs1269175730 2949 dbSNP
rs1426392789 2949 dbSNP
rs562785272 2950 dbSNP
rs1169265971 2951 dbSNP
rs1035364385 2955 dbSNP
rs542603658 2955 dbSNP
rs529278994 2957 dbSNP
rs1161122559 2962 dbSNP
rs1365575722 2978 dbSNP
rs998494385 2978 dbSNP
rs903121015 2979 dbSNP
rs4930386 2986 dbSNP
rs1321389559 2987 dbSNP
rs1434631502 2988 dbSNP
rs1367456451 2989 dbSNP
rs1011482329 2992 dbSNP
rs1382946739 2995 dbSNP
rs1291094419 3002 dbSNP
rs888984731 3003 dbSNP
rs769930435 3010 dbSNP
rs1222154103 3011 dbSNP
rs1394781097 3013 dbSNP
rs1382021889 3014 dbSNP
rs1303788559 3015 dbSNP
rs1267027473 3018 dbSNP
rs1436230458 3020 dbSNP
rs1272400905 3021 dbSNP
rs1484734961 3026 dbSNP
rs1187556379 3030 dbSNP
rs1457100606 3032 dbSNP
rs1386920913 3035 dbSNP
rs1161555686 3039 dbSNP
rs1450935859 3041 dbSNP
rs746047219 3051 dbSNP
rs1417188258 3053 dbSNP
rs1185573800 3058 dbSNP
rs776961431 3059 dbSNP
rs1406480383 3070 dbSNP
rs1258258757 3071 dbSNP
rs752508349 3072 dbSNP
rs1464219848 3078 dbSNP
rs1245998118 3079 dbSNP
rs923327913 3080 dbSNP
rs1210152472 3087 dbSNP
rs764970265 3101 dbSNP
rs747332336 3102 dbSNP
rs1439601174 3103 dbSNP
rs1242070612 3105 dbSNP
rs1324021458 3106 dbSNP
rs1228825759 3116 dbSNP
rs940710288 3117 dbSNP
rs560480673 3118 dbSNP
rs985479559 3119 dbSNP
rs1344840441 3120 dbSNP
rs761030335 3133 dbSNP
rs1201329942 3134 dbSNP
rs540635456 3138 dbSNP
rs113448159 3145 dbSNP
rs1236415767 3173 dbSNP
rs1472801651 3175 dbSNP
rs755176171 3177 dbSNP
rs1406497512 3188 dbSNP
rs1298770345 3198 dbSNP
rs746387266 3201 dbSNP
rs1324870902 3208 dbSNP
rs1468464919 3212 dbSNP
rs1336248455 3216 dbSNP
rs1359833539 3222 dbSNP
rs1336272206 3225 dbSNP
rs1296521819 3229 dbSNP
rs1396623485 3231 dbSNP
rs578125943 3236 dbSNP
rs138375152 3242 dbSNP
rs1311066928 3247 dbSNP
rs754122214 3250 dbSNP
rs1431540016 3254 dbSNP
rs992318971 3254 dbSNP
rs959804422 3255 dbSNP
rs1211701533 3259 dbSNP
rs1230657431 3260 dbSNP
rs1390607567 3267 dbSNP
rs1483028492 3280 dbSNP
rs1183484843 3290 dbSNP
rs1414661774 3298 dbSNP
rs1479629785 3301 dbSNP
rs1035418422 3302 dbSNP
rs1426226322 3303 dbSNP
rs1416354981 3304 dbSNP
rs998579366 3308 dbSNP
rs766496311 3316 dbSNP
rs1011949103 3322 dbSNP
rs1308485399 3324 dbSNP
rs1369787058 3329 dbSNP
rs889032006 3344 dbSNP
rs1187653464 3345 dbSNP
rs1274023790 3346 dbSNP
rs1028812749 3347 dbSNP
rs1220548376 3351 dbSNP
rs997287206 3356 dbSNP
rs1340761887 3361 dbSNP
rs762063147 3361 dbSNP
rs1441269638 3362 dbSNP
rs1254770029 3376 dbSNP
rs1209417046 3379 dbSNP
rs901661784 3385 dbSNP
rs1247631179 3401 dbSNP
rs1036419091 3402 dbSNP
rs150412412 3411 dbSNP
rs1389633425 3443 dbSNP
rs1275839022 3448 dbSNP
rs1170547834 3449 dbSNP
rs1214304762 3451 dbSNP
rs1337714461 3453 dbSNP
rs1286109569 3467 dbSNP
rs1322678743 3479 dbSNP
rs940752255 3485 dbSNP
rs1438176019 3491 dbSNP
rs1245795849 3502 dbSNP
rs1294875446 3503 dbSNP
rs1363997205 3507 dbSNP
rs1228590966 3511 dbSNP
rs535713012 3512 dbSNP
rs1357993033 3515 dbSNP
rs369675183 3515 dbSNP
rs750587634 3515 dbSNP
rs568639145 3520 dbSNP
rs1049054967 3521 dbSNP
rs1191316875 3526 dbSNP
rs774979120 3531 dbSNP
rs1411623603 3532 dbSNP
rs1371042293 3534 dbSNP
rs1307203817 3539 dbSNP
rs1190641640 3540 dbSNP
rs1383436133 3541 dbSNP
rs1407943183 3542 dbSNP
rs1392434377 3555 dbSNP
rs768045646 3556 dbSNP
rs1162515199 3558 dbSNP
rs1472252966 3560 dbSNP
rs1391207316 3562 dbSNP
rs1406936172 3563 dbSNP
rs916820791 3565 dbSNP
rs1387507479 3573 dbSNP
rs769037595 3574 dbSNP
rs1435341315 3582 dbSNP
rs1415075550 3583 dbSNP
rs1183662884 3585 dbSNP
rs1473870046 3586 dbSNP
rs1285238254 3587 dbSNP
rs1203823012 3593 dbSNP
rs992350000 3594 dbSNP
rs1465552430 3597 dbSNP
rs1210779885 3600 dbSNP
rs1253090296 3606 dbSNP
rs1204269343 3611 dbSNP
rs1220318118 3613 dbSNP
rs1436497259 3617 dbSNP
rs1241363099 3621 dbSNP
rs1441857732 3623 dbSNP
rs1188320014 3626 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 83759.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gggaaggaggaggggUCCGGCu 5'
                         |||||| 
Target 5' ---------------AGGCCGg 3'
 		1 - 7
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000531036.2 | 3UTR | AGGCCGGGUGCUGUGGCUCACGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
144 hsa-miR-7107-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT060580 CCND1 cyclin D1 2 4
MIRT451035 ZNF610 zinc finger protein 610 2 2
MIRT485711 CASP16 caspase 16, pseudogene 2 8
MIRT488402 TDRKH tudor and KH domain containing 2 2
MIRT492084 TCF21 transcription factor 21 2 2
MIRT504213 VAV3 vav guanine nucleotide exchange factor 3 2 13
MIRT505723 SERTAD3 SERTA domain containing 3 2 4
MIRT509007 FBXO6 F-box protein 6 2 2
MIRT509843 FOS Fos proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT514761 RBM4B RNA binding motif protein 4B 2 2
MIRT515664 LRRC27 leucine rich repeat containing 27 2 2
MIRT516316 F8A2 coagulation factor VIII associated 2 2 2
MIRT516342 F8A3 coagulation factor VIII associated 3 2 2
MIRT517139 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT518746 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519299 MLH1 mutL homolog 1 2 2
MIRT521527 QSOX1 quiescin sulfhydryl oxidase 1 2 4
MIRT531756 TXK TXK tyrosine kinase 2 2
MIRT542208 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542235 FUT9 fucosyltransferase 9 2 2
MIRT542791 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT554378 SETD5 SET domain containing 5 2 2
MIRT569908 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570222 SLC27A1 solute carrier family 27 member 1 2 2
MIRT570976 RGS19 regulator of G protein signaling 19 2 2
MIRT573046 SHMT1 serine hydroxymethyltransferase 1 2 2
MIRT574954 Vav3 vav 3 oncogene 2 8
MIRT609297 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT612990 GBX2 gastrulation brain homeobox 2 2 2
MIRT613851 SHB SH2 domain containing adaptor protein B 2 2
MIRT613935 POLR3A RNA polymerase III subunit A 2 2
MIRT614243 WDR53 WD repeat domain 53 2 4
MIRT615158 SPIB Spi-B transcription factor 2 2
MIRT616145 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT616389 C1orf87 chromosome 1 open reading frame 87 2 2
MIRT617737 ATCAY ATCAY, caytaxin 2 4
MIRT621449 TCN2 transcobalamin 2 2 2
MIRT625784 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT628556 MELK maternal embryonic leucine zipper kinase 2 2
MIRT632041 ZNF430 zinc finger protein 430 2 2
MIRT634937 GTF2H2C GTF2H2 family member C 2 4
MIRT637208 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT637610 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT637832 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638107 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT638387 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT641689 SPCS1 signal peptidase complex subunit 1 2 2
MIRT642611 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643850 LACTB lactamase beta 2 4
MIRT649575 PALD1 phosphatase domain containing, paladin 1 2 2
MIRT649860 WDR12 WD repeat domain 12 2 2
MIRT651026 ZNF699 zinc finger protein 699 2 2
MIRT652336 TMOD3 tropomodulin 3 2 4
MIRT653286 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 2 2
MIRT656292 METTL14 methyltransferase like 14 2 2
MIRT656458 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT659539 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT661537 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT668042 GTPBP10 GTP binding protein 10 2 2
MIRT668147 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT668800 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT669818 STOML1 stomatin like 1 2 2
MIRT670490 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670615 NPHP1 nephrocystin 1 2 2
MIRT670892 CYTIP cytohesin 1 interacting protein 2 2
MIRT670943 LIPG lipase G, endothelial type 2 2
MIRT671268 MTRNR2L5 MT-RNR2-like 5 2 2
MIRT671903 GBP4 guanylate binding protein 4 2 2
MIRT672239 ABHD15 abhydrolase domain containing 15 2 2
MIRT672326 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT673113 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT674412 GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase 2 2
MIRT677718 IRF1 interferon regulatory factor 1 2 2
MIRT678585 PPP1R3B protein phosphatase 1 regulatory subunit 3B 2 2
MIRT678726 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT679338 ISG20L2 interferon stimulated exonuclease gene 20 like 2 2 2
MIRT679614 RRP36 ribosomal RNA processing 36 2 2
MIRT679695 SLC1A5 solute carrier family 1 member 5 2 4
MIRT679715 RPL24 ribosomal protein L24 2 2
MIRT680065 CD96 CD96 molecule 2 2
MIRT683379 ESR2 estrogen receptor 2 2 2
MIRT683683 MICA MHC class I polypeptide-related sequence A 2 2
MIRT683865 OCIAD1 OCIA domain containing 1 2 2
MIRT684073 TLR7 toll like receptor 7 2 2
MIRT684126 CEP104 centrosomal protein 104 2 2
MIRT684485 GPR137B G protein-coupled receptor 137B 2 2
MIRT684736 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT684778 MYO1F myosin IF 2 2
MIRT685028 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT685189 DCTN5 dynactin subunit 5 2 2
MIRT685307 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT685514 MSH3 mutS homolog 3 2 2
MIRT685702 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT685944 PTGIS prostaglandin I2 synthase 2 2
MIRT686311 VPS53 VPS53, GARP complex subunit 2 2
MIRT686686 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT687641 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT687923 HOOK3 hook microtubule tethering protein 3 2 2
MIRT688117 GEMIN8 gem nuclear organelle associated protein 8 2 2
MIRT688460 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT688629 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT688823 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT689117 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT689166 ZNF665 zinc finger protein 665 2 2
MIRT690070 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT690733 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT691324 KIAA1841 KIAA1841 2 2
MIRT691517 ZNF682 zinc finger protein 682 2 2
MIRT691607 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT692314 RFK riboflavin kinase 2 2
MIRT692376 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT692436 METTL8 methyltransferase like 8 2 2
MIRT692782 SYNPO2L synaptopodin 2 like 2 2
MIRT693136 THEM4 thioesterase superfamily member 4 2 2
MIRT693422 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT693871 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT694049 PRIM1 DNA primase subunit 1 2 2
MIRT694092 KIAA0930 KIAA0930 2 2
MIRT694190 ZNF347 zinc finger protein 347 2 2
MIRT695177 SLC25A33 solute carrier family 25 member 33 2 2
MIRT696180 GNB5 G protein subunit beta 5 2 2
MIRT697387 ZMAT3 zinc finger matrin-type 3 2 2
MIRT698924 SPEM1 spermatid maturation 1 2 2
MIRT699314 SLC35F5 solute carrier family 35 member F5 2 4
MIRT701106 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT701575 MYPN myopalladin 2 2
MIRT701825 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT702047 METTL21A methyltransferase like 21A 2 2
MIRT703034 HAS2 hyaluronan synthase 2 2 4
MIRT704143 DNAL1 dynein axonemal light chain 1 2 2
MIRT704759 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT705079 C4orf29 abhydrolase domain containing 18 2 2
MIRT705346 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706104 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT709070 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT709534 ZBED1 zinc finger BED-type containing 1 2 2
MIRT712356 NAT14 N-acetyltransferase 14 (putative) 2 2
MIRT713713 PAOX polyamine oxidase 2 2
MIRT714304 ZNF454 zinc finger protein 454 2 2
MIRT714919 PPP1R12C protein phosphatase 1 regulatory subunit 12C 2 2
MIRT715792 TBL3 transducin beta like 3 2 2
MIRT717376 RBM41 RNA binding motif protein 41 2 2
MIRT719069 ACOX1 acyl-CoA oxidase 1 2 2
MIRT724548 HAUS2 HAUS augmin like complex subunit 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-7107-5p Docetaxel 148124 NSC628503 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-7107-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-7107-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-7107-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-7107-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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