pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol KLLN   
Synonyms CWS4, KILLIN
Description killin, p53-regulated DNA replication inhibitor
Transcript NM_001126049   
Expression
Putative miRNA Targets on KLLN
3'UTR of KLLN
(miRNA target sites are highlighted)
>KLLN|NM_001126049|3'UTR
   1 GACCTGAGACTCACTCCTTGCTCTACATCGACCTATTCTGCGCCTTCCCAAACGTGGGAAAAGGAGCTGGGCGCTAGGGC
  81 TCTCGGGCCTCTCCATCGCTGATGCCCTGCCGCTTAGGGTGAACCCTTTTGGTTCTGTGCTTGAGGGTATCTCCTGCTGC
 161 AGCCCAGAGCGTGCATTCTCCGATGTTGCAACAAACGTCCAGTCACTACCCCTGAGCTGGTGAGCGCGCCCCACCTACTG
 241 TGGACTCAGCCAAGTGACTTATCTGGTCTGAGAACCTAGTCAATGGCCGTCAGCCCAGAACAAACCTGTCAAGTCTGTTT
 321 ACAGCCCCGATTGGGCTGACCTGTCACCGTGAGAGAGCTGATTCGGAAATGCTGAGAGTTGGATCGCACTCCTACCCCGC
 401 ACCCCACCCGTCAAGGATCTACAAAGCAAGTAGTCGACCCGCTTAAAGAGAATGAGCATCAACACCAGTCTGGGAATTTA
 481 TTGTTTTTTCATTTCCCTTAGGAAGTAGAACTACAGACGACAATTTGAGTCAAAAAATATCTAACGAGACCTAGGTTGAA
 561 GCACTGAGTTGTTTTTCAAACTTTGAGAGAATGAGAATCAATCTGCATGTGTGTTCAATAATTGTAAGTGCCTAGCAAAG
 641 TCTAAAGAGGGTTTATGCTGTATTTGAGAAAGAGTACTGTATATGTGCACATCATAGTTGCAGGCAACCTCTGAAGACTA
 721 GAAACCTCAAGAGACCTAGCGCAGAAAGCCACAGGCCATTACCTAACTCCGGGACTACTAATTAAACCTGGGATATTTAC
 801 AGTGTTCTTAGAGACCTCTGAGGCTCCATAAAACTTTGCACTTATATACAGCATTTAAGATAGCTGTGCAGGAGTTAACA
 881 ACCTGCTGAAGCTTCAGTGTTGATATTTATTGAAGACTGGTTTTGTGCATAGTTCTGGTCAGCTTGGGAAAGGCAAGGAC
 961 CACAGTGGAAAAGGAAATGGAAAGCAACCGGAAAAGAGTAAGAGAAAGGCCTCCAGTTGATTTCCAGAGATGCAGATACT
1041 GTCCACACAGCCTAGCGTGAACTACAGATTTCATTATTGTATAAATAACCAAAGATAAGGAGTTCCTGATGTCTAGGTGT
1121 TCTACTAGATTGCATGGTAAAAACCAGAGCTGTGTTTAATTATCAATTACTGCGTGGTAGAAAAAGGGAAAATGAAGATG
1201 AACTTTTAAAAGGGGAGTAGATTAGGGAGGGGTAAAATGTCTCACATTTGTTTCTTAGATTGCTGATCTTGTCTCCAGAG
1281 TCCCTGTTATTAGCACTGCCCTTCTCTGTCCCTCCCCTGGAGCCTACCCTAAGTGACAATTAGTCTCATAGCATCTGAGA
1361 ATCTCTGAAATCTGCTTTCATGGAAGCAAATGAAACAAGGGTGCATTCCTGTCCTGGTGCGACAGAATCCTCTTGGATTC
1441 CATGGCACAGAGTTACTCTGGAGCAGAGATAATCTGCATCACCAGCACTAAAGTGCTAGAATATGAGACCAGCCTCCAAG
1521 TACTTCCATCCGGCTGAAGAAAGAAAATGGGAAATGGGTTTTACTGCTTCTCTAAACATCAGGTCCCTCTACTTCTCTCT
1601 AGTGGTGAATGAAAGGATCATCAATGTTGGCAGATATTTGGCCAGCCCAACAGCAACATCAGGTGGTTATTAGGAGTTGG
1681 TGAATAAAATCCTCCTTCTGTTCCTAGTGTTAAGTTGTTTCTGAAAGAAATACTGATGCATCCTTTTCCAATTTTTTGTT
1761 TTTCTTTTCCTTTCTACCCAAATGGCTGGCCCTATCTAAACTAAAGAAAGTTTCAAAAATAGTACTTTTTTAAAGTTCAG
1841 TTGAAAATACCTGCTTGGCTGTATAGATATTACAATACACTGGTCTCCAAGCACTTCAGTTCTTTTTTTTTTTTTCTTTT
1921 TTTTTTTTTTTTTTTGAGACGGAGTCTCACAGGCTGGAGTGCAGTGGCATGATCTCGGTTCACTGCAACCTCTGCCTCCC
2001 AGGTTCAAGCAATTCCCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCATCATGCCGGGCTAATTTTTT
2081 GTAGTTTAGTAAAGACAGGGTTTCACCATGTTGGTCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCGCCACGGC
2161 CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCATACTTAGTTCTTTACCTGTCTGGATTCAGAACCA
2241 GAATACCATAGGGAGAAGTAGAAGCTTGTAACAAAGGGACAATTATATAAAGCTTCAGGGTGACTATGTAGATTGATTAG
2321 TAAGCATGGTAAACTAGCTTTAATTATCGCTTCTAACAGCTGATTCCAAAACTCTATTGTTACTACACCAAAATAATGTC
2401 GAAAGAAAATTTCTTTCTTATTTTCTTTGATAAGCGAAATGACCAGCAACTTGATGTGGATGATATAAATACTTGATGTG
2481 CTCTTTGTAGGTCATCTGCTAAGATGTCTTTTGTGTAAACACTCTGATCTCTATAGTGCCTTTCTCATCTCCCATACGCT
2561 GACCTTTCAAAAAGGGATCTAACTCAATAGCTTTAATTTTTAAACAATCTTCTGTATTTCTGTCTGTTTAACTACTGTTT
2641 TCTAAATAATACAGAATATAAAAACATAATAATCATTGGATTGAATGTAAACCCATTGTTCCAAGGGTCTGAGGTTTTCC
2721 CCTTATTTCATTTATCCTAATAACAAACATTATTGTTCTTTCAATAAAGATAATTTTAAGACATTCTCCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguaGAAGGAAGUCGGAg 5'
              || || ||||||| 
Target 5' tcccCTGCC-TCAGCCTc 3'
2014 - 2030 149.00 -17.60
2
miRNA  3' ggUAGAAGGA--AGUCGGAg 5'
            ||  |:||  |||||:| 
Target 5' gcATAGTTCTGGTCAGCTTg 3'
927 - 946 134.00 -11.70
3
miRNA  3' gguagaaGGAAGUCGGag 5'
                 || ||||||  
Target 5' tcaatggCCGTCAGCCca 3'
280 - 297 127.00 -13.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31574929 1 COSMIC
COSN30160980 14 COSMIC
COSN31490271 64 COSMIC
COSN31582232 80 COSMIC
COSN26436155 102 COSMIC
COSN31533169 110 COSMIC
COSN22854166 209 COSMIC
COSN30531383 213 COSMIC
COSN1505581 348 COSMIC
COSN24511889 972 COSMIC
COSN21695425 1539 COSMIC
COSN505896 1764 COSMIC
COSN19093736 1915 COSMIC
COSN23840717 2056 COSMIC
COSN23803340 2153 COSMIC
COSN21463033 2201 COSMIC
COSN32056259 2435 COSMIC
COSN22178104 2679 COSMIC
COSN26218223 2740 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1252090932 1 dbSNP
rs1221372634 3 dbSNP
rs1320293027 15 dbSNP
rs866089700 16 dbSNP
rs1247277998 17 dbSNP
rs1453243802 19 dbSNP
rs754403847 20 dbSNP
rs948529354 22 dbSNP
rs915748685 23 dbSNP
rs1038101433 25 dbSNP
rs1448308319 26 dbSNP
rs1373667040 29 dbSNP
rs1049005151 38 dbSNP
rs751537271 44 dbSNP
rs181069579 53 dbSNP
rs776404259 54 dbSNP
rs779972240 59 dbSNP
rs1291663041 62 dbSNP
rs1226244257 76 dbSNP
rs982834495 80 dbSNP
rs1484565201 84 dbSNP
rs755976514 87 dbSNP
rs1247814230 89 dbSNP
rs1447975711 91 dbSNP
rs538764371 104 dbSNP
rs1267163366 110 dbSNP
rs1419734367 112 dbSNP
rs1314749155 118 dbSNP
rs35361056 120 dbSNP
rs944445841 121 dbSNP
rs1448196453 124 dbSNP
rs1378853832 125 dbSNP
rs1470294318 136 dbSNP
rs922847290 149 dbSNP
rs977749646 151 dbSNP
rs1436956643 158 dbSNP
rs1379827642 161 dbSNP
rs966768504 163 dbSNP
rs1218862601 173 dbSNP
rs975642929 175 dbSNP
rs1299359927 179 dbSNP
rs990352050 192 dbSNP
rs1325688810 193 dbSNP
rs1329871669 194 dbSNP
rs964142634 197 dbSNP
rs1268014697 201 dbSNP
rs1210921919 219 dbSNP
rs1034458216 220 dbSNP
rs1002029131 228 dbSNP
rs1243020465 231 dbSNP
rs747190523 247 dbSNP
rs141066244 256 dbSNP
rs768601757 262 dbSNP
rs1480438950 270 dbSNP
rs1158970309 275 dbSNP
rs1409600288 277 dbSNP
rs1458728213 278 dbSNP
rs746974442 282 dbSNP
rs1031108701 283 dbSNP
rs1049035850 284 dbSNP
rs549954376 289 dbSNP
rs531710639 301 dbSNP
rs147739023 312 dbSNP
rs1405582559 318 dbSNP
rs1024196123 322 dbSNP
rs1247888662 324 dbSNP
rs1218968439 328 dbSNP
rs1012856533 329 dbSNP
rs565600813 352 dbSNP
rs1225965766 361 dbSNP
rs1285459607 364 dbSNP
rs911677803 365 dbSNP
rs1218930167 369 dbSNP
rs1286258766 371 dbSNP
rs1241382007 373 dbSNP
rs1356291852 374 dbSNP
rs1305572292 379 dbSNP
rs1490376722 379 dbSNP
rs1038196954 385 dbSNP
rs1223664245 386 dbSNP
rs1368406887 389 dbSNP
rs1473564907 397 dbSNP
rs1177653777 398 dbSNP
rs1412804491 402 dbSNP
rs1403348050 403 dbSNP
rs1162972380 405 dbSNP
rs1367739313 407 dbSNP
rs1425500280 413 dbSNP
rs1042514560 414 dbSNP
rs945093784 419 dbSNP
rs549283354 424 dbSNP
rs1280584660 430 dbSNP
rs990381784 435 dbSNP
rs941227231 438 dbSNP
rs190019605 463 dbSNP
rs1359764009 464 dbSNP
rs1365238832 465 dbSNP
rs1271874593 483 dbSNP
rs1182474596 490 dbSNP
rs1438974647 490 dbSNP
rs886853852 496 dbSNP
rs1421355710 509 dbSNP
rs1236778731 521 dbSNP
rs771917238 522 dbSNP
rs1358375092 523 dbSNP
rs1158307852 533 dbSNP
rs1183417258 535 dbSNP
rs1259024071 537 dbSNP
rs1215170154 538 dbSNP
rs1445533715 539 dbSNP
rs1433633785 540 dbSNP
rs1046842267 545 dbSNP
rs746073034 546 dbSNP
rs779241478 550 dbSNP
rs546594521 552 dbSNP
rs975615084 563 dbSNP
rs1330174992 564 dbSNP
rs527952325 568 dbSNP
rs185094431 571 dbSNP
rs915524974 582 dbSNP
rs560318248 583 dbSNP
rs868229865 589 dbSNP
rs1218327551 591 dbSNP
rs927476077 594 dbSNP
rs1383911754 597 dbSNP
rs1227216408 603 dbSNP
rs1489485147 609 dbSNP
rs545544697 624 dbSNP
rs1259266273 625 dbSNP
rs990036632 626 dbSNP
rs757250596 629 dbSNP
rs1215750037 645 dbSNP
rs7901097 647 dbSNP
rs1031497239 648 dbSNP
rs1304020241 649 dbSNP
rs982227448 654 dbSNP
rs1188202747 656 dbSNP
rs1464221058 656 dbSNP
rs1371504995 664 dbSNP
rs970693450 670 dbSNP
rs1344958727 671 dbSNP
rs1279143908 678 dbSNP
rs1413280207 681 dbSNP
rs564991821 686 dbSNP
rs1339191019 689 dbSNP
rs950708133 694 dbSNP
rs1027632333 717 dbSNP
rs752592502 720 dbSNP
rs1327867490 729 dbSNP
rs543082103 737 dbSNP
rs1227693294 740 dbSNP
rs1023653461 742 dbSNP
rs1273788365 751 dbSNP
rs1342191813 755 dbSNP
rs994757307 756 dbSNP
rs900384916 765 dbSNP
rs1012282716 770 dbSNP
rs1263549650 771 dbSNP
rs894378768 788 dbSNP
rs1016897965 789 dbSNP
rs1194097117 792 dbSNP
rs1246205299 799 dbSNP
rs1479473984 802 dbSNP
rs1179234767 809 dbSNP
rs1430671105 813 dbSNP
rs1457143938 814 dbSNP
rs1005788190 818 dbSNP
rs1338149905 823 dbSNP
rs370905351 824 dbSNP
rs576119843 825 dbSNP
rs554575355 826 dbSNP
rs193149038 828 dbSNP
rs1466341357 835 dbSNP
rs777746796 840 dbSNP
rs1047211102 845 dbSNP
rs758349626 850 dbSNP
rs1283346058 858 dbSNP
rs1328444810 861 dbSNP
rs933775427 864 dbSNP
rs1042154611 868 dbSNP
rs1468888951 871 dbSNP
rs1351043262 882 dbSNP
rs945097749 883 dbSNP
rs1289363079 885 dbSNP
rs190576098 889 dbSNP
rs1201730388 893 dbSNP
rs1053351356 894 dbSNP
rs1472582524 896 dbSNP
rs1039334339 897 dbSNP
rs927590216 906 dbSNP
rs1186355716 921 dbSNP
rs942395877 927 dbSNP
rs1454597349 935 dbSNP
rs980743043 935 dbSNP
rs367801804 945 dbSNP
rs552946896 958 dbSNP
rs1054076618 968 dbSNP
rs149992281 980 dbSNP
rs1202318977 985 dbSNP
rs1349324717 990 dbSNP
rs924137454 994 dbSNP
rs756622635 997 dbSNP
rs1407925548 998 dbSNP
rs983573108 1004 dbSNP
rs982574784 1012 dbSNP
rs1243855465 1017 dbSNP
rs1270278813 1022 dbSNP
rs1282178927 1028 dbSNP
rs950737364 1054 dbSNP
rs1258719676 1056 dbSNP
rs970788362 1057 dbSNP
rs1324954987 1059 dbSNP
rs1194623800 1070 dbSNP
rs916689747 1071 dbSNP
rs1420184915 1079 dbSNP
rs1295086444 1080 dbSNP
rs1383773887 1088 dbSNP
rs1446143016 1090 dbSNP
rs571678582 1107 dbSNP
rs1369433503 1110 dbSNP
rs994872380 1114 dbSNP
rs183894316 1122 dbSNP
rs191518084 1125 dbSNP
rs1397173016 1130 dbSNP
rs1395375377 1134 dbSNP
rs1310383065 1144 dbSNP
rs56389051 1168 dbSNP
rs1005468817 1184 dbSNP
rs951267088 1193 dbSNP
rs1009203010 1196 dbSNP
rs1341577197 1198 dbSNP
rs890315860 1199 dbSNP
rs1253121213 1203 dbSNP
rs1042576369 1207 dbSNP
rs1200373748 1208 dbSNP
rs567345489 1215 dbSNP
rs1183846495 1217 dbSNP
rs1389217823 1218 dbSNP
rs1426335715 1220 dbSNP
rs1451741542 1232 dbSNP
rs893591399 1242 dbSNP
rs1053466617 1244 dbSNP
rs1334528680 1251 dbSNP
rs998458449 1276 dbSNP
rs1408071495 1279 dbSNP
rs1221971947 1290 dbSNP
rs530010360 1296 dbSNP
rs900914720 1298 dbSNP
rs548921567 1301 dbSNP
rs1361577811 1304 dbSNP
rs527990207 1305 dbSNP
rs1297891944 1316 dbSNP
rs1308094217 1324 dbSNP
rs186662792 1325 dbSNP
rs1261761447 1328 dbSNP
rs1326251357 1329 dbSNP
rs565799299 1333 dbSNP
rs1247792332 1337 dbSNP
rs1484720493 1348 dbSNP
rs950324368 1350 dbSNP
rs917426656 1353 dbSNP
rs1261817736 1354 dbSNP
rs533552717 1356 dbSNP
rs983989404 1359 dbSNP
rs1174217772 1361 dbSNP
rs1431425271 1365 dbSNP
rs750010648 1372 dbSNP
rs929449995 1399 dbSNP
rs935608831 1401 dbSNP
rs116928332 1403 dbSNP
rs1046540588 1404 dbSNP
rs1182293782 1410 dbSNP
rs543524504 1420 dbSNP
rs964722457 1421 dbSNP
rs184216900 1442 dbSNP
rs560875179 1444 dbSNP
rs916656956 1449 dbSNP
rs1281416688 1452 dbSNP
rs990909150 1459 dbSNP
rs1284021852 1463 dbSNP
rs1315430847 1468 dbSNP
rs1217531914 1470 dbSNP
rs1251023826 1472 dbSNP
rs954754961 1476 dbSNP
rs963332533 1477 dbSNP
rs1196705745 1478 dbSNP
rs1270412003 1480 dbSNP
rs1020863504 1488 dbSNP
rs561450801 1491 dbSNP
rs542634874 1493 dbSNP
rs1903860 1498 dbSNP
rs554012658 1508 dbSNP
rs1424255044 1512 dbSNP
rs893623945 1519 dbSNP
rs1367462799 1530 dbSNP
rs544909412 1531 dbSNP
rs1279443095 1532 dbSNP
rs80005718 1534 dbSNP
rs531162210 1542 dbSNP
rs1001879832 1551 dbSNP
rs556057845 1554 dbSNP
rs1308124393 1558 dbSNP
rs1358372977 1565 dbSNP
rs191630598 1577 dbSNP
rs1293339214 1578 dbSNP
rs1490352134 1583 dbSNP
rs1204388098 1587 dbSNP
rs997974056 1603 dbSNP
rs1177637579 1617 dbSNP
rs965218352 1624 dbSNP
rs1245174298 1629 dbSNP
rs1377624633 1630 dbSNP
rs1017945496 1631 dbSNP
rs1412782078 1633 dbSNP
rs1006598237 1634 dbSNP
rs893439863 1651 dbSNP
rs1161828247 1663 dbSNP
rs1367559671 1669 dbSNP
rs1425322672 1675 dbSNP
rs1328247769 1678 dbSNP
rs567383999 1682 dbSNP
rs1444990198 1690 dbSNP
rs1299163294 1694 dbSNP
rs1382420801 1695 dbSNP
rs896088294 1700 dbSNP
rs139261693 1712 dbSNP
rs559242940 1717 dbSNP
rs776163150 1719 dbSNP
rs1213519951 1722 dbSNP
rs999621692 1726 dbSNP
rs902761339 1731 dbSNP
rs1439549459 1733 dbSNP
rs920733998 1735 dbSNP
rs1293766667 1747 dbSNP
rs1459062743 1748 dbSNP
rs973504572 1749 dbSNP
rs188576792 1753 dbSNP
rs1370595413 1757 dbSNP
rs943398070 1762 dbSNP
rs1047118121 1764 dbSNP
rs949497530 1789 dbSNP
rs895318892 1791 dbSNP
rs1167480043 1794 dbSNP
rs1417450699 1796 dbSNP
rs767495314 1806 dbSNP
rs1171654618 1813 dbSNP
rs1405852757 1827 dbSNP
rs1450850827 1832 dbSNP
rs1339069436 1841 dbSNP
rs954730785 1850 dbSNP
rs183638448 1855 dbSNP
rs1267910957 1861 dbSNP
rs942105320 1862 dbSNP
rs1181036341 1870 dbSNP
rs552063520 1875 dbSNP
rs760596593 1877 dbSNP
rs957878077 1891 dbSNP
rs1249819793 1893 dbSNP
rs1210691039 1899 dbSNP
rs1489558473 1900 dbSNP
rs1308847074 1902 dbSNP
rs1245031710 1903 dbSNP
rs1243526340 1907 dbSNP
rs983454661 1908 dbSNP
rs1311449475 1909 dbSNP
rs369197917 1911 dbSNP
rs1334668554 1912 dbSNP
rs865997618 1913 dbSNP
rs567129170 1915 dbSNP
rs113730541 1916 dbSNP
rs1179104228 1916 dbSNP
rs1429265001 1916 dbSNP
rs796254377 1916 dbSNP
rs1024716753 1917 dbSNP
rs772642013 1917 dbSNP
rs1491323518 1918 dbSNP
rs1327701628 1919 dbSNP
rs1363384851 1921 dbSNP
rs1282052248 1922 dbSNP
rs1013705888 1926 dbSNP
rs976647564 1927 dbSNP
rs1263547843 1929 dbSNP
rs1302141512 1930 dbSNP
rs1424491150 1931 dbSNP
rs1361504841 1933 dbSNP
rs1282364504 1934 dbSNP
rs1160801409 1935 dbSNP
rs1157167737 1936 dbSNP
rs1194558508 1936 dbSNP
rs1202140363 1936 dbSNP
rs1268247717 1936 dbSNP
rs1297995981 1936 dbSNP
rs1378601608 1936 dbSNP
rs1469898801 1936 dbSNP
rs1479750027 1936 dbSNP
rs5786795 1936 dbSNP
rs763209997 1936 dbSNP
rs1363106307 1937 dbSNP
rs1406706303 1937 dbSNP
rs1466960646 1937 dbSNP
rs1469015924 1937 dbSNP
rs1283806235 1938 dbSNP
rs1363320235 1940 dbSNP
rs569434957 1941 dbSNP
rs1281042947 1943 dbSNP
rs965146818 1949 dbSNP
rs550852908 1952 dbSNP
rs1291137741 1956 dbSNP
rs1489868508 1960 dbSNP
rs1222010232 1969 dbSNP
rs1225391385 1972 dbSNP
rs1018084283 1976 dbSNP
rs192064705 1977 dbSNP
rs1365902156 1989 dbSNP
rs188956302 2001 dbSNP
rs755493639 2003 dbSNP
rs1162465014 2006 dbSNP
rs771826993 2007 dbSNP
rs542671953 2012 dbSNP
rs527262178 2015 dbSNP
rs1293583068 2016 dbSNP
rs1349806992 2018 dbSNP
rs999190332 2032 dbSNP
rs902184994 2033 dbSNP
rs559860708 2035 dbSNP
rs1241189375 2041 dbSNP
rs1314566828 2047 dbSNP
rs1357518835 2052 dbSNP
rs943544607 2053 dbSNP
rs1266102724 2054 dbSNP
rs1480626397 2060 dbSNP
rs1194528755 2063 dbSNP
rs1013863440 2064 dbSNP
rs545310935 2067 dbSNP
rs1055287973 2068 dbSNP
rs1240942773 2077 dbSNP
rs1446052282 2081 dbSNP
rs913874411 2081 dbSNP
rs573588280 2084 dbSNP
rs1371936763 2091 dbSNP
rs1460407598 2096 dbSNP
rs150816814 2100 dbSNP
rs1341552790 2104 dbSNP
rs1320630706 2110 dbSNP
rs887865832 2122 dbSNP
rs1451705389 2123 dbSNP
rs556335233 2127 dbSNP
rs1399294889 2128 dbSNP
rs1313551862 2131 dbSNP
rs1048312669 2134 dbSNP
rs1306926611 2135 dbSNP
rs957910603 2141 dbSNP
rs1253551127 2142 dbSNP
rs1173671772 2147 dbSNP
rs373364249 2152 dbSNP
rs923269796 2153 dbSNP
rs1182013418 2156 dbSNP
rs374986491 2157 dbSNP
rs548514172 2158 dbSNP
rs141469860 2163 dbSNP
rs1469221851 2164 dbSNP
rs543307510 2166 dbSNP
rs1174067559 2169 dbSNP
rs911160271 2169 dbSNP
rs980604833 2172 dbSNP
rs1467782798 2185 dbSNP
rs1303608499 2188 dbSNP
rs1190823236 2191 dbSNP
rs78839565 2195 dbSNP
rs140073260 2196 dbSNP
rs533991936 2197 dbSNP
rs1025167074 2198 dbSNP
rs566878155 2201 dbSNP
rs749476311 2202 dbSNP
rs1013322063 2203 dbSNP
rs1210413519 2207 dbSNP
rs60373064 2213 dbSNP
rs966379121 2214 dbSNP
rs1206442731 2223 dbSNP
rs1024659060 2225 dbSNP
rs1263255708 2226 dbSNP
rs1218882903 2227 dbSNP
rs530195013 2229 dbSNP
rs1197112865 2249 dbSNP
rs1431207742 2251 dbSNP
rs183136843 2257 dbSNP
rs748659967 2259 dbSNP
rs1033971383 2261 dbSNP
rs899452245 2268 dbSNP
rs1300180565 2273 dbSNP
rs1326200448 2278 dbSNP
rs781774241 2281 dbSNP
rs1404913166 2286 dbSNP
rs1335468383 2291 dbSNP
rs1454989531 2300 dbSNP
rs1037955781 2303 dbSNP
rs1006381812 2306 dbSNP
rs1314820267 2307 dbSNP
rs1241792092 2310 dbSNP
rs887953117 2311 dbSNP
rs889278788 2317 dbSNP
rs1047769480 2318 dbSNP
rs1220196264 2320 dbSNP
rs1271030116 2322 dbSNP
rs1488748833 2332 dbSNP
rs371100979 2335 dbSNP
rs994009741 2339 dbSNP
rs933395736 2342 dbSNP
rs189765659 2348 dbSNP
rs184914771 2349 dbSNP
rs536035434 2358 dbSNP
rs181205569 2359 dbSNP
rs1250027548 2372 dbSNP
rs1421968140 2375 dbSNP
rs911127789 2377 dbSNP
rs1301336046 2379 dbSNP
rs1352182256 2384 dbSNP
rs1049637350 2388 dbSNP
rs936478022 2389 dbSNP
rs1241914489 2393 dbSNP
rs925240268 2404 dbSNP
rs867492561 2413 dbSNP
rs1243192451 2415 dbSNP
rs1291403424 2415 dbSNP
rs75742574 2418 dbSNP
rs1474968095 2419 dbSNP
rs1481463289 2420 dbSNP
rs966848462 2425 dbSNP
rs1178995161 2435 dbSNP
rs917697756 2436 dbSNP
rs1444231893 2445 dbSNP
rs1185378071 2448 dbSNP
rs969654175 2450 dbSNP
rs991822493 2453 dbSNP
rs1406463497 2456 dbSNP
rs1459885766 2459 dbSNP
rs1353146236 2462 dbSNP
rs751899970 2472 dbSNP
rs1242426894 2473 dbSNP
rs1033897702 2478 dbSNP
rs77542800 2483 dbSNP
rs952224634 2484 dbSNP
rs1458707781 2488 dbSNP
rs1285466139 2495 dbSNP
rs1026913967 2517 dbSNP
rs560896889 2524 dbSNP
rs901931710 2526 dbSNP
rs1040468246 2529 dbSNP
rs1339147245 2537 dbSNP
rs560097889 2544 dbSNP
rs1007479735 2552 dbSNP
rs995213590 2555 dbSNP
rs1285116177 2557 dbSNP
rs551051140 2558 dbSNP
rs962352944 2563 dbSNP
rs1239315693 2568 dbSNP
rs533300514 2574 dbSNP
rs1381287951 2585 dbSNP
rs557052599 2586 dbSNP
rs1447699533 2589 dbSNP
rs1016555504 2595 dbSNP
rs1049641885 2605 dbSNP
rs1327107893 2608 dbSNP
rs936597489 2609 dbSNP
rs1030459460 2616 dbSNP
rs1414282729 2628 dbSNP
rs373583523 2630 dbSNP
rs562639933 2643 dbSNP
rs1340676218 2646 dbSNP
rs1429460540 2654 dbSNP
rs1042594288 2655 dbSNP
rs536723454 2656 dbSNP
rs892585249 2657 dbSNP
rs1442509168 2668 dbSNP
rs753496923 2669 dbSNP
rs1282400765 2670 dbSNP
rs936697394 2674 dbSNP
rs544033033 2680 dbSNP
rs903848459 2683 dbSNP
rs1281055837 2690 dbSNP
rs917666605 2697 dbSNP
rs1230611556 2710 dbSNP
rs1261112204 2716 dbSNP
rs1479098653 2724 dbSNP
rs947958947 2725 dbSNP
rs1429067836 2726 dbSNP
rs991915979 2734 dbSNP
rs1203420335 2745 dbSNP
rs1174642178 2748 dbSNP
rs958989747 2753 dbSNP
rs926297153 2754 dbSNP
rs1315628107 2764 dbSNP
rs992041763 2766 dbSNP
rs1361821513 2771 dbSNP
rs1400569193 2772 dbSNP
rs76631158 2778 dbSNP
rs12571737 2794 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 100144748.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguaGAAGGAAGUCggag 5'
              || || ||||    
Target 5' ucccCUGCC-UCAG---- 3'
12 - 24
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 100144748.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguagaaggaaGUCGGAg 5'
                     | |||| 
Target 5' aagcaauucccCUGCCUc 3'
4 - 21
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_001126049 | 3UTR | UCCCAGGUUCAAGCAAUUCCCCUGCCUCAGCCUCCCGAGUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_001126049 | 3UTR | CCAGGUUCAAGCAAUUCCCCUGCCUCAGCCUCCCGAGUAGCUGGGACUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001126049 | 3UTR | CACUGCAACCUCUGCCUCCCAGGUUCAAGCAAUUCCCCUGCCUCAGCCUCCCGAGUAGCUGGGACUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_001126049 | 3UTR | AACCUCUGCCUCCCAGGUUCAAGCAAUUCCCCUGCCUCAGCCUCCCGAGUAGCUGGGACUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_001126049 | 3UTR | GCAAUUCCCCUGCCUCAGCCUCCCGAGUAGCUGGGACUACAGGCGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000445946.3 | 3UTR | GUUCAAGCAAUUCCCCUGCCUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000445946.3 | 3UTR | UUCAAGCAAUUCCCCUGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

Error report submission