miRTarBase - #MIRT517594


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pre-miRNA Information
pre-miRNA hsa-mir-4781   
Genomic Coordinates chr1: 54054079 - 54054154
Description Homo sapiens miR-4781 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4781-3p
Sequence 46| AAUGUUGGAAUCCUCGCUAGAG |67
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs968609764 2 dbSNP
rs899910686 3 dbSNP
rs74085143 4 dbSNP
rs550946107 8 dbSNP
rs747064911 10 dbSNP
rs1352517651 13 dbSNP
rs1436072914 22 dbSNP
Putative Targets

Gene Information
Gene Symbol ZNF579   
Synonyms -
Description zinc finger protein 579
Transcript NM_152600   
Expression
Putative miRNA Targets on ZNF579
3'UTR of ZNF579
(miRNA target sites are highlighted)		 
>ZNF579|NM_152600|3'UTR
   1 CCTTCGCCGCCCTGCCCTCCGCCGCTCCGCCTGAGCTCCCCGGTTTGCAGAATGGAGGAGGGAAGTTGAAGGAGCCACCT
  81 CCTCTGTCTACCCACCCGTCCCCTTCACGCCCTTGACACTAAGGAGTGGGGGGCCCTGGACTGCCCCTTCCTCCCCCATC
 161 GCCCGCCCCCAGAACCCCTGATGCTGGTTAGGAACCGCTCACCCCAACATGTGTCTTAAGGCAGGACGACTTGGAAAAAA
 241 AGGCGGCGGACAGTTGGCCAGAGGGATGGAGACTGGTGGGGACGCCCCCGCCTCCCTGTCCCCCGTTTCACACACTGGAC
 321 ACCATCACCTCTTTGGAACTGCCAGACCCTGGGGGTCCCCAGTGAGCAAAGGTCTGTCCTTGTCCCTTTGTCTGTCTGTG
 401 AATAAATGTGAGTTCGTGAAATCCAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaGAUCGCUCCU-----A---AGGUUGUAa 5'
            ||:|: ||||     |    ||||||| 
Target 5' tgCTGGTTAGGAACCGCTCACCCCAACATg 3'
 182 - 211 148.00 -14.20
2 
miRNA  3' gagaucGCUCCUAAGGUUGUaa 5'
                || | | ||||| |  
Target 5' tgagttCGTGAAATCCAAAAaa 3'
 409 - 430 104.00 -5.46
3 
miRNA  3' gagaucGCUCCUA-AGGUUGUaa 5'
                :|:||:|  |||:::  
Target 5' agacccTGGGGGTCCCCAGTGag 3'
 344 - 366 84.00 -13.31
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30576976 9 COSMIC
COSN31581387 21 COSMIC
COSN31603292 29 COSMIC
COSN30166525 55 COSMIC
COSN31491567 84 COSMIC
COSN31592832 96 COSMIC
COSN31563069 141 COSMIC
COSN31539236 244 COSMIC
COSN26573124 290 COSMIC
COSN31590285 349 COSMIC
COSN8606564 367 COSMIC
COSN31571951 415 COSMIC
COSN28825327 464 COSMIC
COSN1772221 543 COSMIC
COSN26390732 762 COSMIC
COSN1772219 792 COSMIC
COSN27313513 809 COSMIC
COSN5762208 1079 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1238050013 1 dbSNP
rs1352730402 2 dbSNP
rs575846445 4 dbSNP
rs780103934 5 dbSNP
rs377230490 6 dbSNP
rs756192538 7 dbSNP
rs1284743438 9 dbSNP
rs1225742347 12 dbSNP
rs746303908 13 dbSNP
rs559077167 15 dbSNP
rs1318057427 18 dbSNP
rs781427167 19 dbSNP
rs372800344 20 dbSNP
rs1387732710 21 dbSNP
rs1321335531 22 dbSNP
rs781290377 23 dbSNP
rs1329091803 24 dbSNP
rs751206746 26 dbSNP
rs1447391681 27 dbSNP
rs1427476377 29 dbSNP
rs757035005 35 dbSNP
rs1480879882 39 dbSNP
rs909163927 40 dbSNP
rs980675818 41 dbSNP
rs188794000 42 dbSNP
rs1232626762 57 dbSNP
rs1024736711 59 dbSNP
rs1256749105 66 dbSNP
rs1325954319 72 dbSNP
rs991889246 74 dbSNP
rs1257800085 75 dbSNP
rs57846854 79 dbSNP
rs59026892 82 dbSNP
rs1198074615 93 dbSNP
rs956479940 97 dbSNP
rs1053817 98 dbSNP
rs1168152536 103 dbSNP
rs1299636985 108 dbSNP
rs1029941482 110 dbSNP
rs762296733 113 dbSNP
rs1369028591 115 dbSNP
rs1299745251 119 dbSNP
rs1388505218 128 dbSNP
rs1192424745 130 dbSNP
rs1000979222 131 dbSNP
rs1000081718 134 dbSNP
rs1217018001 145 dbSNP
rs114967586 146 dbSNP
rs746692259 148 dbSNP
rs1318959065 151 dbSNP
rs1207084167 156 dbSNP
rs1264155356 158 dbSNP
rs1488460349 158 dbSNP
rs780222546 160 dbSNP
rs1011297035 162 dbSNP
rs1189385177 165 dbSNP
rs1191053066 171 dbSNP
rs1468260543 180 dbSNP
rs1295023896 183 dbSNP
rs892893727 190 dbSNP
rs1172295676 192 dbSNP
rs1366604173 197 dbSNP
rs1018949552 202 dbSNP
rs1294102757 205 dbSNP
rs1211766490 206 dbSNP
rs1357176305 209 dbSNP
rs767816971 215 dbSNP
rs758792387 227 dbSNP
rs891317299 228 dbSNP
rs928526047 235 dbSNP
rs746370906 243 dbSNP
rs536556006 245 dbSNP
rs748737387 247 dbSNP
rs1038454248 248 dbSNP
rs1310994938 263 dbSNP
rs929792851 265 dbSNP
rs1367710118 268 dbSNP
rs1298886856 278 dbSNP
rs941362796 280 dbSNP
rs927284148 282 dbSNP
rs1294668777 283 dbSNP
rs1360886258 288 dbSNP
rs1330201892 290 dbSNP
rs567903884 302 dbSNP
rs1486007601 305 dbSNP
rs1187938945 313 dbSNP
rs981110956 316 dbSNP
rs1164060426 323 dbSNP
rs1390858254 324 dbSNP
rs947951540 329 dbSNP
rs973882897 331 dbSNP
rs550810469 349 dbSNP
rs531000608 360 dbSNP
rs564674216 371 dbSNP
rs923694734 374 dbSNP
rs1378889938 376 dbSNP
rs1396974458 379 dbSNP
rs979170131 388 dbSNP
rs551039612 397 dbSNP
rs1245158610 408 dbSNP
rs1237272692 417 dbSNP
rs1017913688 431 dbSNP
rs1006947610 433 dbSNP
rs1217492932 449 dbSNP
rs757389913 451 dbSNP
rs1253889017 452 dbSNP
rs955634957 454 dbSNP
rs1183998697 455 dbSNP
rs1244854600 463 dbSNP
rs1437717793 465 dbSNP
rs1249912775 467 dbSNP
rs1408795480 474 dbSNP
rs1203626579 482 dbSNP
rs1030323255 493 dbSNP
rs754009838 498 dbSNP
rs1345009777 499 dbSNP
rs1275770150 504 dbSNP
rs1470477885 510 dbSNP
rs1029909597 512 dbSNP
rs994379267 528 dbSNP
rs1343352123 530 dbSNP
rs1310704407 535 dbSNP
rs1373342702 544 dbSNP
rs1224982596 552 dbSNP
rs1272667571 562 dbSNP
rs897290593 563 dbSNP
rs1478942168 568 dbSNP
rs1331112978 571 dbSNP
rs59859551 579 dbSNP
rs559095646 583 dbSNP
rs542561918 592 dbSNP
rs1372388096 593 dbSNP
rs905878518 595 dbSNP
rs1233386968 598 dbSNP
rs1471165468 601 dbSNP
rs573898270 612 dbSNP
rs1011097416 619 dbSNP
rs183899158 620 dbSNP
rs1178912856 621 dbSNP
rs892878949 623 dbSNP
rs1465437066 626 dbSNP
rs1330075596 627 dbSNP
rs1174464952 630 dbSNP
rs193086394 633 dbSNP
rs1443695045 640 dbSNP
rs547192912 645 dbSNP
rs1272542544 647 dbSNP
rs1366353190 648 dbSNP
rs1223737115 649 dbSNP
rs1284882526 650 dbSNP
rs1411312419 651 dbSNP
rs1001607024 655 dbSNP
rs917867265 656 dbSNP
rs756241406 660 dbSNP
rs1246178623 661 dbSNP
rs1490550596 663 dbSNP
rs577888168 667 dbSNP
rs1056270812 668 dbSNP
rs1253115777 672 dbSNP
rs1421777401 680 dbSNP
rs534959342 681 dbSNP
rs1045818743 684 dbSNP
rs1281175182 686 dbSNP
rs1404076703 686 dbSNP
rs1197823149 693 dbSNP
rs1364407465 694 dbSNP
rs752980275 694 dbSNP
rs929871952 696 dbSNP
rs77282471 698 dbSNP
rs1345354270 704 dbSNP
rs979608938 708 dbSNP
rs762804607 710 dbSNP
rs1341270705 711 dbSNP
rs1226521662 716 dbSNP
rs910948085 720 dbSNP
rs539154060 738 dbSNP
rs754199784 743 dbSNP
rs1360183723 750 dbSNP
rs1224848092 751 dbSNP
rs1351817852 753 dbSNP
rs1261254241 754 dbSNP
rs371758009 757 dbSNP
rs1029924275 759 dbSNP
rs994390536 760 dbSNP
rs1447201741 763 dbSNP
rs1357205354 773 dbSNP
rs1335998362 776 dbSNP
rs773125038 778 dbSNP
rs77659309 779 dbSNP
rs1424694186 782 dbSNP
rs536648757 784 dbSNP
rs1164969753 792 dbSNP
rs1358123448 793 dbSNP
rs1017081456 795 dbSNP
rs1006116963 804 dbSNP
rs62127841 806 dbSNP
rs80306853 808 dbSNP
rs76620330 809 dbSNP
rs1314234063 820 dbSNP
rs1383479487 820 dbSNP
rs1428896140 820 dbSNP
rs966963810 820 dbSNP
rs567958580 823 dbSNP
rs1248130620 829 dbSNP
rs12972695 830 dbSNP
rs79241306 839 dbSNP
rs776066441 842 dbSNP
rs1412812281 844 dbSNP
rs1205934396 849 dbSNP
rs143391043 851 dbSNP
rs1440997313 854 dbSNP
rs1187316492 855 dbSNP
rs1244252624 863 dbSNP
rs1472135205 866 dbSNP
rs1177370284 869 dbSNP
rs1377933692 876 dbSNP
rs1001259065 877 dbSNP
rs1386713017 879 dbSNP
rs906951311 883 dbSNP
rs142593315 897 dbSNP
rs1406604871 898 dbSNP
rs1056322220 899 dbSNP
rs1454496824 900 dbSNP
rs1023952449 912 dbSNP
rs1211328458 915 dbSNP
rs571528565 917 dbSNP
rs761047916 918 dbSNP
rs1203323280 921 dbSNP
rs1267059733 922 dbSNP
rs923833835 925 dbSNP
rs1043593883 931 dbSNP
rs946531989 932 dbSNP
rs1197299451 951 dbSNP
rs911011210 959 dbSNP
rs1330515676 961 dbSNP
rs1238108398 965 dbSNP
rs1288501636 977 dbSNP
rs1181942906 979 dbSNP
rs1365074479 981 dbSNP
rs985171325 1004 dbSNP
rs1175335744 1005 dbSNP
rs1406534807 1006 dbSNP
rs933656058 1009 dbSNP
rs922236799 1013 dbSNP
rs1329148599 1027 dbSNP
rs1395716133 1030 dbSNP
rs768223598 1034 dbSNP
rs1392001303 1040 dbSNP
rs1330944292 1043 dbSNP
rs1329470659 1050 dbSNP
rs1376946905 1054 dbSNP
rs149225651 1056 dbSNP
rs1284245107 1060 dbSNP
rs961676666 1065 dbSNP
rs1217199367 1067 dbSNP
rs1448431351 1072 dbSNP
rs1387662541 1074 dbSNP
rs1481227650 1077 dbSNP
rs529690427 1081 dbSNP
rs1459026661 1086 dbSNP
rs1389464901 1089 dbSNP
rs1164245408 1098 dbSNP
rs187679205 1099 dbSNP
rs1429566912 1100 dbSNP
rs1481265391 1104 dbSNP
rs1404075727 1109 dbSNP
rs1372332926 1110 dbSNP
rs970628732 1111 dbSNP
rs941193447 1112 dbSNP
rs1388664503 1117 dbSNP
rs1449177985 1147 dbSNP
rs1246574619 1158 dbSNP
rs182965250 1159 dbSNP
rs889649317 1165 dbSNP
rs1023056008 1168 dbSNP
rs528863118 1169 dbSNP
rs190392303 1174 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 163033.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM545212
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / Control
Location of target site ENST00000325421.4 | 3UTR | AUAACUUUUUUUUUUUCUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000325421.4 | 3UTR | AUAACUUUUUUUUUUUCUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
204 hsa-miR-4781-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT071728 CCNK cyclin K 2 2
MIRT184858 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT205881 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT218699 ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 2 2
MIRT223783 OXR1 oxidation resistance 1 2 2
MIRT242435 GAN gigaxonin 2 2
MIRT306825 NCBP2 nuclear cap binding protein subunit 2 2 2
MIRT334170 CCND1 cyclin D1 2 6
MIRT339617 TMPO thymopoietin 2 2
MIRT400371 C2ORF68 chromosome 2 open reading frame 68 2 2
MIRT445533 KIF1B kinesin family member 1B 2 4
MIRT450273 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT450701 RORA RAR related orphan receptor A 2 2
MIRT451160 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT453775 NUCB1 nucleobindin 1 2 10
MIRT453884 IFRD1 interferon related developmental regulator 1 2 12
MIRT454238 OSBPL10 oxysterol binding protein like 10 2 9
MIRT458661 PAGR1 PAXIP1 associated glutamate rich protein 1 2 12
MIRT466948 STAU1 staufen double-stranded RNA binding protein 1 2 2
MIRT470278 PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 2 2
MIRT471144 PHF19 PHD finger protein 19 2 2
MIRT471873 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT476739 FOXN2 forkhead box N2 2 2
MIRT480453 C16orf72 chromosome 16 open reading frame 72 2 6
MIRT482107 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483374 CYP4A22 cytochrome P450 family 4 subfamily A member 22 2 2
MIRT484063 CYP4A11 cytochrome P450 family 4 subfamily A member 11 2 2
MIRT496329 SH3BGRL SH3 domain binding glutamate rich protein like 2 2
MIRT498659 AP3B2 adaptor related protein complex 3 beta 2 subunit 2 4
MIRT498711 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 10
MIRT499322 ZNF485 zinc finger protein 485 2 6
MIRT499711 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 10
MIRT499767 CIRH1A UTP4, small subunit processome component 2 6
MIRT499912 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 8
MIRT504946 ZSWIM6 zinc finger SWIM-type containing 6 2 4
MIRT505377 TMEM154 transmembrane protein 154 2 4
MIRT508778 GSG1 germ cell associated 1 2 2
MIRT509793 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT512421 LAYN layilin 2 4
MIRT513321 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT513592 DCTN6 dynactin subunit 6 2 2
MIRT514785 RBM4B RNA binding motif protein 4B 2 2
MIRT514859 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 2
MIRT515122 LMOD3 leiomodin 3 2 2
MIRT515271 CSNK1E casein kinase 1 epsilon 2 2
MIRT515594 FBXL13 F-box and leucine rich repeat protein 13 2 2
MIRT515880 PLXDC2 plexin domain containing 2 2 2
MIRT515908 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT515960 C9orf156 tRNA methyltransferase O 2 2
MIRT517210 OTUD6A OTU deubiquitinase 6A 2 2
MIRT517330 ZNF347 zinc finger protein 347 2 2
MIRT517480 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT517594 ZNF579 zinc finger protein 579 2 4
MIRT517676 TRIM72 tripartite motif containing 72 2 2
MIRT518215 TRMT10B tRNA methyltransferase 10B 2 2
MIRT518583 ATP8B1 ATPase phospholipid transporting 8B1 2 2
MIRT518777 ZFP14 ZFP14 zinc finger protein 2 2
MIRT519094 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 4
MIRT519112 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT519400 DNASE2 deoxyribonuclease 2, lysosomal 2 4
MIRT519446 GLA galactosidase alpha 2 2
MIRT519476 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT519711 ZNF584 zinc finger protein 584 2 4
MIRT521409 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT521522 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT522652 MANEAL mannosidase endo-alpha like 2 2
MIRT523505 GMPS guanine monophosphate synthase 2 4
MIRT523795 FAM63B MINDY lysine 48 deubiquitinase 2 2 2
MIRT524062 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524136 DMXL1 Dmx like 1 2 2
MIRT524192 DENND4C DENN domain containing 4C 2 4
MIRT525925 KIAA0391 KIAA0391 2 2
MIRT528021 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT528685 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT528769 CD1D CD1d molecule 2 2
MIRT529373 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 2 4
MIRT529469 ZNF546 zinc finger protein 546 2 2
MIRT529641 ZNF621 zinc finger protein 621 2 2
MIRT530681 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 4
MIRT530752 GPR82 G protein-coupled receptor 82 2 2
MIRT531628 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT531649 C19orf52 translocase of inner mitochondrial membrane 29 2 4
MIRT532179 SEC14L5 SEC14 like lipid binding 5 2 4
MIRT532219 CCDC117 coiled-coil domain containing 117 2 2
MIRT534238 SLC25A16 solute carrier family 25 member 16 2 4
MIRT539952 SLC30A5 solute carrier family 30 member 5 2 2
MIRT540179 MB21D1 Mab-21 domain containing 1 2 2
MIRT540466 ZNF71 zinc finger protein 71 2 2
MIRT540560 PPIC peptidylprolyl isomerase C 2 2
MIRT543265 ZNF662 zinc finger protein 662 2 2
MIRT543596 KIAA1549 KIAA1549 2 2
MIRT543971 RNF20 ring finger protein 20 2 2
MIRT544053 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT544605 DCAF5 DDB1 and CUL4 associated factor 5 2 2
MIRT544679 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT547627 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT550668 TRAF1 TNF receptor associated factor 1 2 2
MIRT551533 EMB embigin 2 2
MIRT552443 ZNF449 zinc finger protein 449 2 2
MIRT559265 BAG4 BCL2 associated athanogene 4 2 4
MIRT562479 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT564211 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT565973 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT570524 SHH sonic hedgehog 2 2
MIRT575307 Osbpl10 oxysterol binding protein-like 10 2 6
MIRT618212 C22orf39 chromosome 22 open reading frame 39 2 2
MIRT620115 HARBI1 harbinger transposase derived 1 2 2
MIRT624062 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT626083 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT629868 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630750 COG6 component of oligomeric golgi complex 6 2 2
MIRT631002 ZNF573 zinc finger protein 573 2 2
MIRT631100 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT631290 SGSM1 small G protein signaling modulator 1 2 2
MIRT631337 CD300E CD300e molecule 2 2
MIRT631532 MYO6 myosin VI 2 2
MIRT631644 WDR91 WD repeat domain 91 2 4
MIRT632788 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT633282 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT633593 ABRACL ABRA C-terminal like 2 2
MIRT634074 PLIN3 perilipin 3 2 2
MIRT634163 YME1L1 YME1 like 1 ATPase 2 2
MIRT634257 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634679 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT638384 RABL3 RAB, member of RAS oncogene family like 3 2 2
MIRT638687 GCLM glutamate-cysteine ligase modifier subunit 2 2
MIRT640311 PRR13 proline rich 13 2 2
MIRT641132 NPHP3 nephrocystin 3 2 2
MIRT642315 FPR1 formyl peptide receptor 1 2 2
MIRT643703 KIAA0586 KIAA0586 2 2
MIRT644322 NFKBID NFKB inhibitor delta 2 2
MIRT645741 POLR3A RNA polymerase III subunit A 2 2
MIRT646975 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 2
MIRT648064 TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 2 2
MIRT648536 CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 2 2
MIRT649294 NEK8 NIMA related kinase 8 2 2
MIRT650014 KLB klotho beta 2 2
MIRT650551 YIPF4 Yip1 domain family member 4 2 2
MIRT651796 UTP6 UTP6, small subunit processome component 2 2
MIRT652647 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT653548 SLC38A7 solute carrier family 38 member 7 2 2
MIRT653895 SGK3 serum/glucocorticoid regulated kinase family member 3 2 2
MIRT655470 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT657764 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT659118 DENND6A DENN domain containing 6A 2 2
MIRT659377 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659836 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT659954 C8orf44-SGK3 C8orf44-SGK3 readthrough 2 2
MIRT660258 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT663268 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 2 2
MIRT663766 ZNF285 zinc finger protein 285 2 2
MIRT666198 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT669763 ZNF101 zinc finger protein 101 2 4
MIRT669933 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT670007 GPR156 G protein-coupled receptor 156 2 4
MIRT670465 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670868 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671313 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT671959 SPPL3 signal peptide peptidase like 3 2 2
MIRT672281 SHE Src homology 2 domain containing E 2 2
MIRT673654 CYCS cytochrome c, somatic 2 2
MIRT674063 ATXN3 ataxin 3 2 2
MIRT674423 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT674438 MIOX myo-inositol oxygenase 2 4
MIRT674483 BCL2L15 BCL2 like 15 2 2
MIRT675478 NUBPL nucleotide binding protein like 2 2
MIRT675648 TTPAL alpha tocopherol transfer protein like 2 2
MIRT675981 FAM126B family with sequence similarity 126 member B 2 2
MIRT676251 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT677652 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT682718 KIAA1456 KIAA1456 2 2
MIRT687545 MOB1B MOB kinase activator 1B 2 2
MIRT689620 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690035 CCDC90B coiled-coil domain containing 90B 2 2
MIRT691449 CXorf36 chromosome X open reading frame 36 2 2
MIRT691549 FLYWCH2 FLYWCH family member 2 2 2
MIRT691737 LARS leucyl-tRNA synthetase 2 2
MIRT692638 SUSD1 sushi domain containing 1 2 2
MIRT693866 IYD iodotyrosine deiodinase 2 2
MIRT693979 ZNF70 zinc finger protein 70 2 2
MIRT694150 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT695492 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT695547 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT696023 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT696402 CORO7 coronin 7 2 2
MIRT703028 HEATR5A HEAT repeat containing 5A 2 2
MIRT703559 FKBP14 FK506 binding protein 14 2 2
MIRT705036 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT705120 C4orf29 abhydrolase domain containing 18 2 2
MIRT706611 CYB5B cytochrome b5 type B 2 2
MIRT706635 PNPT1 polyribonucleotide nucleotidyltransferase 1 2 2
MIRT706730 RFK riboflavin kinase 2 2
MIRT706868 MAFF MAF bZIP transcription factor F 2 2
MIRT707020 RRP36 ribosomal RNA processing 36 2 2
MIRT707036 ACTR5 ARP5 actin related protein 5 homolog 2 2
MIRT707125 ZNF154 zinc finger protein 154 2 2
MIRT707390 SLC35F6 solute carrier family 35 member F6 2 2
MIRT708664 LYRM7 LYR motif containing 7 2 2
MIRT713010 BBX BBX, HMG-box containing 2 2
MIRT717314 TRAF3IP1 TRAF3 interacting protein 1 2 2
MIRT721912 C6orf201 chromosome 6 open reading frame 201 2 2
MIRT723050 YTHDC1 YTH domain containing 1 2 2
MIRT725038 NDUFAF7 NADH:ubiquinone oxidoreductase complex assembly factor 7 2 2
MIRT755316 SMAD5 SMAD family member 5 4 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4781-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4781-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4781-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4781-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)

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