pre-miRNA Information
pre-miRNA hsa-mir-3179-1   
Genomic Coordinates chr16: 14901508 - 14901591
Description Homo sapiens miR-3179-1 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-3179-2   
Genomic Coordinates chr16: 16300159 - 16300242
Description Homo sapiens miR-3179-2 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-3179-3   
Genomic Coordinates chr16: 18411894 - 18411977
Description Homo sapiens miR-3179-3 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-3179-4   
Genomic Coordinates chr16: 18494493 - 18494576
Description Homo sapiens miR-3179-4 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-3179
Sequence 52| AGAAGGGGUGAAAUUUAAACGU |73
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1351100204 1 dbSNP
rs1398613616 4 dbSNP
rs1340262765 20 dbSNP
rs1229893475 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF366   
Synonyms DC-SCRIPT, DCSCRIPT
Description zinc finger protein 366
Transcript NM_152625   
Expression
Putative miRNA Targets on ZNF366
3'UTR of ZNF366
(miRNA target sites are highlighted)
>ZNF366|NM_152625|3'UTR
   1 GTGGACAGTTTTAAAATTACATTTGGAAAATGAGAAGGAGGCAGTTCAAATATAGCTTTCTGCATGAACTGTCATTTTCT
  81 GGAGACTGGCGAATAGTACCAATCTCTACAAATGGCTTAGACTAAATGAGCAGGGATGTAGGTAATGGAAAGCCTTCTCA
 161 GGTCATTCACGGGGCCCTTGATACCCTTCACACATGTGCAGGGTCTTCATCAGTGGCGTTTTATGCATTGCCAGTATAAT
 241 AAACTGTGAGTATTCTTCCAGATATCTAATTGTAAGCTGATGCTGAGGTGCTTTTAGAAATTCTACTTTCCTTTGATTCA
 321 TATGCAATACATGGTAAATTTCTAATTGCAAAAATATGGTGCTTGAGGTGTCACCTTATTAATAACTATTTAGGTGAATT
 401 TGTGAAGGTTATAATATTTTCCATATAGATGAAAATATTAGTCGTCATATATATAAAAATAGCCTTTATTCTATAACCAA
 481 AAATGTCAGAAATGGCACAGGAGGATGAGCTATTGAAGAGAATGCTCTCCAGTAGTTGCTGCAGATATAAGGTAAAATTT
 561 CAGGAGAAGAATAATTTTGACTAAGGGAAACTGGTGACCTAGAATACTTAGATTCTCTTGTTCTGTGTCGGCTGTCTTCA
 641 TCAGATTGAGCATTTGGAGCATTATTTTTCAGATGATATGATGATGTTTGGGGCCCTGGCTCCTCAGACAAACCCTCACT
 721 TCTCGAGCACGGCTCCCTCCTGGAGACCATTGCTGTCTTGCTCTGAGGCCTCATGCCCCATAAGACAGATGCAGGGGCCG
 801 GGCGCAGAGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACTTGAGGTCAGGAGTTTGAGAC
 881 CAACCTGGCCAACGTGGCAAAACCCCTTCTCTACTAAAAATACAAAAATTAGCCAGGCATGATGGCAGGAGCCTGTAGTT
 961 CCAGCTACTCGGGAGGCTGAAGCAGGAGAATCGTTTGAACCCAGGCAGTGGAGATTGCAGTGAGCTGAGCTGAGATCACG
1041 CTACTGCACTACAGCCTGGGTGACAGAGTGAGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAGGACAGATGCAGGAAG
1121 ACTTGTCACCAGTGACCAGGGGGCTTTCTCCTCAGAGCTAGAGCTGGGGGGGTGACCTCAGAGAATTCTCCCAGAAATCT
1201 AAGCTCTGACTTATTTGGGGTACTAGAATAGTTGACAGCAAATCATTAGTAAAGAAGACTCTGGACTGTGTTTTCAGTGC
1281 TGGCTGTACATTAGAAGCATCTGGGGTGACCTTTAAAAAAAAACCACCAAACCAAGGCCTTACCCATTAAGATTCTGATT
1361 TAATTGATCTGGAGTGGAGCCCTAGGACTGAAATTTTCCAAATTGCTCCTGGCAATTCTTATGTGCAGCCAAGATTGAGA
1441 AGATTGAGGGGACTAAAATAGAACTCACCATTTCTGTGGCTTCCAGGACACTTCCCAGAGACTTCATAAGTATTTCTGTT
1521 CCTAGCCTCAGACTCTTTAAGGTTGAGAATAGGAGACCTCACAATCATACTGCTGACTTAGGCTTTCTTACCTGTCTGTA
1601 AGAGCCTTATGAGCGGACACACACAGTCTATATATAGATACACACTTTTTACATTATACTAGAAGATGATGCCTGTGATG
1681 TTTATGGTCACTTACTATGTTTAAAAAATGCATGACTGGCCTATGGTGACTCATTATTTCTTCCCAGATGCTTGAACCAT
1761 GATGCCAGTGAGTGGAAATGACTCTATTGGGTGGGATGGGCCCAGCAGGTCAGACTTACTTAGGCACTGGCACTGAGAAA
1841 AGCAATACTGACTGGGTGTCGTGTACGTGTGACTGCCCATAGCAATAACCCTCTGGTACTGTGTCTGTTTATGTAAAAAC
1921 TTCTTGTTTGGTAGTTTTGACTCGTATTTGTAGAGCTAGGTACTGGTTATTATTGTGCTTCATCCTATCCCAGATTTCCC
2001 AGTACATTCCTTTAGAAGACATGTCCATCTCCAACTGCTGGGGGCTGGCCTTTTCTGTAGGCCAAGGTGCTGCCCCATTA
2081 GCCCCACCTGGTTGTCATCACTCACCCATGTGTTGTGTCCATCTCTGACCCATTTCCCCTGCCACCTTGCCTAAAGCTTC
2161 TCCTGTCAGCCTCCCCACCACCATGAAGTGCTAAGAGTACTATGTCCTGAGGTAAGGGCACCTGCAACGGAGATTGTGAA
2241 GAGAAGACTGTGGGTTTCTGTGGTTACAAGCACAACTCTGGGTCAAAAACCCATTCCAAGTCCTCAGAGGGGCAAGTCCC
2321 TTCCATTCAGTATTAATATAGCTCATCAGTGCCTCTGATGAAATTGCCCAGGATGCTGGCAGTGTGGCCTGGGAGGCTTC
2401 CAGCTCTTGGGGTCTGGTTACACATTTATTCACACTGCGGCCATGTGTTGAGGACCTACTATGTGCTGTGTTTGACCACA
2481 CGTCCTGTAGAATGCCGTTTGGTTCTGAGTATGCCTGGCTGGAATGGAAACCAGGAAATTCTAGAGTAACAGGCTCTAGT
2561 CCTTTCCAACCAAAACAAACCTCATGGGAATGTTTGAGGGACCAGTTAATGTTGAGACAGAGAGAGTATGGTCTAGAATG
2641 GTGGTTTTCAGATTGTGTTTTGAGAAGCCAGAGGTCATCTTTAGGCCTCTGAAGAGTGGTAAGGGGAGGAGAAGCTCTCA
2721 ACTCCCACACCCACCTCACTCCAAGCAGCTCAAGTTCCATCTGATTTATACATTAGCATTCTAAGTAAAATTTTATTTGG
2801 AGGCAGTAAAAAGGTCTAGGAGAAATAAAAACAATTTGTTATGGAGTGTATTCCAGGGCCTGTTTTTAGTTGTTGACTCT
2881 GGGCATAAGACACTTAATTAGATCTAACCTGATGGTTAATACAGCATTAACCTGAGCACCAATGCTAAAACATTGGTTTT
2961 GTATGCTGTTGAGTGACCAACATCCTGGTTTGCCTGGGATGATCGTGGTTTAGACCTGTTGTCCCAGGATAATTATTCAA
3041 GTGTCACCTTAATTCTCAAAAGTATTCCAGTTTGGGTGAGAAATTACATGGACACTTTATGCAAGAGCACAGAGTTAAGG
3121 GAAGGGTTGGCCAGCCTTGCCTAATGAGCTGATGAACCAGAAGGCAAGCCTTGAAGGAGAGTCCATGTGGGCCATCTCAG
3201 AGAACTAAGGGATGAAGCCTTCCAAGATTACCAGCATTCCAAAACCAGAATATCATATTGTGAGACTCTGAAAATAGGTC
3281 ACTACCAAATGCTTTCCAGCCTTTTGACCACTGTCACTTTGAACAAATCAATGGACCAGCAAAGTGGCATATTTTTCTTT
3361 TATTCTTTTTATTCTTTCCTATGATTACTCCTCATGTTACCTTTCAATTCCTCTTTCTGTCTCTCTTTTTAAAAATTTGA
3441 CTCCCCACCGGCCATGAGACTAAGGCTGACCTTTCATAAACCCACAAGAGTAACTGGTATATTTGTATATGAGTAGTTGC
3521 ATGAGAAAGCTCAATGTGCATACTGTATTTATTAAGCCCTGAACGCATTTAATAAAATATTAACATGGTGTTTTGAATTA
3601 TGATCTTTGTCTGCTTTGCTGGAACAAAATATAACAGAGCTAACGTTTGAAATCCTTCGCATATTTGGACAACATTACAC
3681 CAAATGTTGATTTTGTACAGAACTCTGGCTTGCTATTTAAAAACTAAAACTCTAAGTATATAGCAGCCCAAGTTGTGAAT
3761 ATTGCTTTCTGCTTCACTGAAAAAGCAGTTTACCTGAAAAGAGCATGTAACCTATATTTTGTTAATTTAAGCAAATAAAG
3841 ACATGTTGAAAAAGCTG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugcaaaUUUAAAGUGGGGAAGa 5'
                |||    |||||||| 
Target 5' cgtggcAAA----ACCCCTTCt 3'
893 - 910 146.00 -15.96
2
miRNA  3' ugcaAAUUUAAAGU---GGGGAAGa 5'
              |||  |||||   ||:|||: 
Target 5' catgTTACCTTTCAATTCCTCTTTc 3'
3393 - 3417 130.00 -9.70
3
miRNA  3' ugcaaauuuaaagUGGGGAAGa 5'
                       ::|||||| 
Target 5' ctcagaggggcaaGTCCCTTCc 3'
2303 - 2324 125.00 -10.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26958454 1 COSMIC
COSN30574228 3 COSMIC
COSN31560839 6 COSMIC
COSN32059503 25 COSMIC
COSN30473597 43 COSMIC
COSN30178914 46 COSMIC
COSN23875731 60 COSMIC
COSN31583571 174 COSMIC
COSN31610379 192 COSMIC
COSN15576646 444 COSMIC
COSN22663116 579 COSMIC
COSN6926322 716 COSMIC
COSN6926321 717 COSMIC
COSN6926320 730 COSMIC
COSN22543826 800 COSMIC
COSN32045492 867 COSMIC
COSN29465542 1067 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs770424180 5 dbSNP
rs760117737 6 dbSNP
rs1184937828 17 dbSNP
rs1413274880 25 dbSNP
rs1293692900 27 dbSNP
rs1246515891 30 dbSNP
rs764871895 31 dbSNP
rs1312891098 34 dbSNP
rs4267851 37 dbSNP
rs1362074352 38 dbSNP
rs747944618 40 dbSNP
rs1428228666 41 dbSNP
rs374173373 43 dbSNP
rs1163820278 45 dbSNP
rs770111919 47 dbSNP
rs371219891 49 dbSNP
rs757290919 50 dbSNP
rs542926512 53 dbSNP
rs1227571056 62 dbSNP
rs77724139 64 dbSNP
rs1323800282 79 dbSNP
rs920221002 80 dbSNP
rs879071676 88 dbSNP
rs1385985943 89 dbSNP
rs565290190 90 dbSNP
rs757072499 91 dbSNP
rs1207327563 93 dbSNP
rs557112810 102 dbSNP
rs1472519985 103 dbSNP
rs1050495865 125 dbSNP
rs139079914 128 dbSNP
rs923240613 129 dbSNP
rs1165012009 133 dbSNP
rs577762280 136 dbSNP
rs961951613 140 dbSNP
rs1371152473 141 dbSNP
rs970458957 143 dbSNP
rs866568398 148 dbSNP
rs1296277709 153 dbSNP
rs1381038928 163 dbSNP
rs1188004170 170 dbSNP
rs1228623183 171 dbSNP
rs1463761014 175 dbSNP
rs987974090 177 dbSNP
rs190965994 179 dbSNP
rs531371029 183 dbSNP
rs1275433074 185 dbSNP
rs1483055348 186 dbSNP
rs1203596562 197 dbSNP
rs907790880 199 dbSNP
rs1201431448 201 dbSNP
rs1483797476 202 dbSNP
rs533748923 203 dbSNP
rs1181599218 208 dbSNP
rs1412627579 209 dbSNP
rs530799418 210 dbSNP
rs566301102 212 dbSNP
rs554726199 217 dbSNP
rs184983562 218 dbSNP
rs899727075 224 dbSNP
rs1023449322 230 dbSNP
rs1168260097 231 dbSNP
rs75724981 232 dbSNP
rs1416111792 237 dbSNP
rs1020047757 242 dbSNP
rs1343410234 243 dbSNP
rs990516166 243 dbSNP
rs960455692 250 dbSNP
rs1380935065 270 dbSNP
rs1034624792 274 dbSNP
rs1437548959 276 dbSNP
rs16878599 281 dbSNP
rs1047168447 287 dbSNP
rs1212831683 292 dbSNP
rs753818368 301 dbSNP
rs898639018 305 dbSNP
rs1209927135 315 dbSNP
rs1241679623 321 dbSNP
rs999598798 322 dbSNP
rs1190084356 323 dbSNP
rs903399541 324 dbSNP
rs1362643238 325 dbSNP
rs1335746009 332 dbSNP
rs1396211469 333 dbSNP
rs1055943066 343 dbSNP
rs545507676 357 dbSNP
rs1165582085 369 dbSNP
rs1427194161 370 dbSNP
rs937601498 371 dbSNP
rs1020946532 372 dbSNP
rs1403597402 373 dbSNP
rs1459068450 375 dbSNP
rs928867722 379 dbSNP
rs758438017 381 dbSNP
rs1364680390 382 dbSNP
rs569123565 393 dbSNP
rs1046048537 402 dbSNP
rs949052803 403 dbSNP
rs750467047 405 dbSNP
rs1219124894 408 dbSNP
rs893297680 415 dbSNP
rs769458698 421 dbSNP
rs1168097784 425 dbSNP
rs1050599040 426 dbSNP
rs1331683460 428 dbSNP
rs1209704878 434 dbSNP
rs550349061 436 dbSNP
rs11951619 437 dbSNP
rs925127429 440 dbSNP
rs1247947305 443 dbSNP
rs72761170 444 dbSNP
rs1427058330 452 dbSNP
rs757401922 456 dbSNP
rs879287331 456 dbSNP
rs1159543198 460 dbSNP
rs1388197856 463 dbSNP
rs1008264244 464 dbSNP
rs1325656540 468 dbSNP
rs752875146 471 dbSNP
rs1350517914 473 dbSNP
rs374120555 478 dbSNP
rs1483702873 484 dbSNP
rs1274526377 486 dbSNP
rs1203865179 494 dbSNP
rs1339493082 499 dbSNP
rs1285388848 500 dbSNP
rs146333389 505 dbSNP
rs1339503722 522 dbSNP
rs1310383251 523 dbSNP
rs1352794417 529 dbSNP
rs985095445 534 dbSNP
rs73763715 537 dbSNP
rs916385476 545 dbSNP
rs1371127168 548 dbSNP
rs990631903 551 dbSNP
rs1307371464 552 dbSNP
rs1457292373 571 dbSNP
rs960405667 572 dbSNP
rs1291468870 580 dbSNP
rs1451701940 582 dbSNP
rs1221039852 589 dbSNP
rs1266691603 591 dbSNP
rs1473499279 592 dbSNP
rs1182708370 598 dbSNP
rs1362978012 602 dbSNP
rs1468841831 608 dbSNP
rs759834377 615 dbSNP
rs1404842226 619 dbSNP
rs753696501 620 dbSNP
rs1301306868 621 dbSNP
rs977900243 624 dbSNP
rs1056374504 625 dbSNP
rs1392990884 628 dbSNP
rs376206993 629 dbSNP
rs1247383007 630 dbSNP
rs1285629689 637 dbSNP
rs1356529062 638 dbSNP
rs1472632363 642 dbSNP
rs1366924013 646 dbSNP
rs553368217 664 dbSNP
rs1484034756 667 dbSNP
rs907488264 674 dbSNP
rs142462438 676 dbSNP
rs1012214605 684 dbSNP
rs1435897534 686 dbSNP
rs1189277519 688 dbSNP
rs1238278919 690 dbSNP
rs893412322 696 dbSNP
rs1029129353 707 dbSNP
rs1444219670 709 dbSNP
rs1161820764 711 dbSNP
rs1392070065 718 dbSNP
rs760651406 724 dbSNP
rs182341331 725 dbSNP
rs1185343073 730 dbSNP
rs752542549 731 dbSNP
rs564006080 732 dbSNP
rs1451459962 742 dbSNP
rs1052028690 744 dbSNP
rs936432934 749 dbSNP
rs1250695214 751 dbSNP
rs1355263829 758 dbSNP
rs1202020996 760 dbSNP
rs1256586933 761 dbSNP
rs1270846017 767 dbSNP
rs1181957239 768 dbSNP
rs1229803697 776 dbSNP
rs1250083786 777 dbSNP
rs940811097 779 dbSNP
rs1287429048 780 dbSNP
rs536226979 792 dbSNP
rs1468018335 793 dbSNP
rs375906905 795 dbSNP
rs1049071802 799 dbSNP
rs930538289 800 dbSNP
rs1366831286 803 dbSNP
rs577576973 804 dbSNP
rs990577844 805 dbSNP
rs912509406 808 dbSNP
rs553067873 813 dbSNP
rs939178120 815 dbSNP
rs1201499975 816 dbSNP
rs1161689201 817 dbSNP
rs1465467734 824 dbSNP
rs927856673 827 dbSNP
rs191421048 830 dbSNP
rs1435466813 832 dbSNP
rs1411695954 835 dbSNP
rs1180465851 843 dbSNP
rs1479663819 844 dbSNP
rs1161754295 852 dbSNP
rs1390453161 854 dbSNP
rs966501004 855 dbSNP
rs914869716 871 dbSNP
rs1025662726 874 dbSNP
rs1472222582 880 dbSNP
rs1382109198 881 dbSNP
rs995471918 883 dbSNP
rs1198999709 884 dbSNP
rs574062502 893 dbSNP
rs186170927 894 dbSNP
rs1210221460 902 dbSNP
rs1221480879 903 dbSNP
rs554508512 906 dbSNP
rs944068158 915 dbSNP
rs1238566287 921 dbSNP
rs1259091529 936 dbSNP
rs907355856 939 dbSNP
rs1268815534 943 dbSNP
rs996470166 946 dbSNP
rs1489998064 947 dbSNP
rs770324694 952 dbSNP
rs1184865923 966 dbSNP
rs1221850465 968 dbSNP
rs112410709 970 dbSNP
rs1275341448 971 dbSNP
rs1005346547 973 dbSNP
rs1435624702 975 dbSNP
rs575450289 976 dbSNP
rs1361667311 979 dbSNP
rs1322569859 990 dbSNP
rs779559989 993 dbSNP
rs112976129 994 dbSNP
rs747320201 1003 dbSNP
rs1309667709 1004 dbSNP
rs1373762503 1007 dbSNP
rs1222952846 1016 dbSNP
rs895182546 1020 dbSNP
rs936312905 1026 dbSNP
rs1157464650 1039 dbSNP
rs1416487585 1040 dbSNP
rs1426259432 1043 dbSNP
rs903641956 1052 dbSNP
rs1172523986 1057 dbSNP
rs1175782444 1061 dbSNP
rs1248000036 1062 dbSNP
rs1477290804 1065 dbSNP
rs1054961892 1067 dbSNP
rs770586843 1068 dbSNP
rs1250608059 1070 dbSNP
rs1189941472 1072 dbSNP
rs1465116637 1074 dbSNP
rs1247011241 1075 dbSNP
rs1441222399 1082 dbSNP
rs1296226156 1083 dbSNP
rs1213436532 1084 dbSNP
rs1453608745 1085 dbSNP
rs865876601 1087 dbSNP
rs868794954 1092 dbSNP
rs1230653482 1095 dbSNP
rs1039440629 1097 dbSNP
rs1218590022 1100 dbSNP
rs1307371255 1101 dbSNP
rs1202942042 1103 dbSNP
rs1168101542 1105 dbSNP
rs1183799759 1105 dbSNP
rs1189871634 1105 dbSNP
rs1247914680 1105 dbSNP
rs1258130567 1105 dbSNP
rs1409297584 1105 dbSNP
rs1484053264 1105 dbSNP
rs569900355 1105 dbSNP
rs753584941 1105 dbSNP
rs760312225 1105 dbSNP
rs772241300 1105 dbSNP
rs939294152 1105 dbSNP
rs866903265 1107 dbSNP
rs1470077727 1114 dbSNP
rs912416220 1120 dbSNP
rs927773818 1122 dbSNP
rs1437386374 1123 dbSNP
rs1270836032 1124 dbSNP
rs986602346 1128 dbSNP
rs1042243372 1129 dbSNP
rs945082867 1135 dbSNP
rs1303929420 1137 dbSNP
rs1299986151 1139 dbSNP
rs1324744929 1139 dbSNP
rs918467544 1140 dbSNP
rs974518774 1142 dbSNP
rs1475069127 1153 dbSNP
rs150970974 1157 dbSNP
rs1480644722 1166 dbSNP
rs1034876427 1167 dbSNP
rs1404263773 1170 dbSNP
rs971431231 1173 dbSNP
rs980192441 1173 dbSNP
rs1344664751 1176 dbSNP
rs1428664456 1178 dbSNP
rs989265889 1179 dbSNP
rs142737644 1188 dbSNP
rs1346628471 1196 dbSNP
rs546599462 1203 dbSNP
rs181409958 1214 dbSNP
rs892051142 1217 dbSNP
rs953691051 1219 dbSNP
rs1321021336 1223 dbSNP
rs1413335559 1225 dbSNP
rs35109972 1229 dbSNP
rs567348347 1232 dbSNP
rs1033224060 1233 dbSNP
rs1212949519 1238 dbSNP
rs1000976158 1241 dbSNP
rs903497605 1242 dbSNP
rs1426909962 1258 dbSNP
rs140390864 1261 dbSNP
rs1039751634 1268 dbSNP
rs778491620 1270 dbSNP
rs1407482914 1286 dbSNP
rs531086893 1290 dbSNP
rs1325591956 1298 dbSNP
rs1366807595 1300 dbSNP
rs189858058 1308 dbSNP
rs974979294 1310 dbSNP
rs942477026 1311 dbSNP
rs966333794 1318 dbSNP
rs551625077 1319 dbSNP
rs890844052 1320 dbSNP
rs1221636924 1321 dbSNP
rs533422786 1323 dbSNP
rs1050917733 1324 dbSNP
rs1360128193 1324 dbSNP
rs1388972112 1326 dbSNP
rs1184430829 1334 dbSNP
rs1019506198 1346 dbSNP
rs1182179205 1357 dbSNP
rs1005054404 1369 dbSNP
rs1473542601 1372 dbSNP
rs1468793026 1374 dbSNP
rs950827210 1377 dbSNP
rs1165592809 1388 dbSNP
rs1385918301 1392 dbSNP
rs1209149427 1404 dbSNP
rs1424037841 1408 dbSNP
rs1027730856 1410 dbSNP
rs994918065 1414 dbSNP
rs929791918 1416 dbSNP
rs376811363 1418 dbSNP
rs1328588644 1424 dbSNP
rs1334875176 1426 dbSNP
rs918541225 1428 dbSNP
rs974004361 1432 dbSNP
rs1341569317 1434 dbSNP
rs895130217 1437 dbSNP
rs1293445994 1444 dbSNP
rs1230239248 1445 dbSNP
rs1055075440 1448 dbSNP
rs1003393493 1449 dbSNP
rs927334877 1451 dbSNP
rs980482961 1452 dbSNP
rs186183926 1453 dbSNP
rs1380164936 1460 dbSNP
rs757074387 1470 dbSNP
rs971463731 1485 dbSNP
rs1413301080 1488 dbSNP
rs1024306811 1490 dbSNP
rs146674227 1491 dbSNP
rs945224410 1506 dbSNP
rs956202308 1517 dbSNP
rs1167741034 1518 dbSNP
rs1394757168 1521 dbSNP
rs915098649 1534 dbSNP
rs1429622754 1539 dbSNP
rs1353429261 1540 dbSNP
rs1338334187 1541 dbSNP
rs1167621993 1553 dbSNP
rs1406274284 1555 dbSNP
rs1451300259 1564 dbSNP
rs574096849 1569 dbSNP
rs562161988 1591 dbSNP
rs1053514687 1596 dbSNP
rs932419415 1598 dbSNP
rs1328167303 1601 dbSNP
rs1228032574 1607 dbSNP
rs1269469754 1611 dbSNP
rs920904334 1614 dbSNP
rs1000468800 1615 dbSNP
rs1264003115 1616 dbSNP
rs542464258 1623 dbSNP
rs944913189 1625 dbSNP
rs1201926012 1627 dbSNP
rs753728317 1635 dbSNP
rs1429680203 1643 dbSNP
rs1193127539 1645 dbSNP
rs1371809350 1646 dbSNP
rs1481627720 1651 dbSNP
rs1177533060 1655 dbSNP
rs1253639812 1658 dbSNP
rs1468935594 1663 dbSNP
rs1300616824 1678 dbSNP
rs1182825599 1680 dbSNP
rs1382253919 1684 dbSNP
rs1317564387 1685 dbSNP
rs143192835 1686 dbSNP
rs1017945897 1698 dbSNP
rs45446498 1702 dbSNP
rs11297646 1703 dbSNP
rs17378693 1703 dbSNP
rs770714865 1703 dbSNP
rs386688951 1704 dbSNP
rs879113850 1704 dbSNP
rs11294795 1709 dbSNP
rs1050823589 1711 dbSNP
rs1262663322 1712 dbSNP
rs994030348 1715 dbSNP
rs756144255 1723 dbSNP
rs1260281807 1739 dbSNP
rs1490980799 1743 dbSNP
rs1200649608 1751 dbSNP
rs896973307 1756 dbSNP
rs1289393404 1759 dbSNP
rs752787204 1762 dbSNP
rs984143191 1763 dbSNP
rs559265961 1769 dbSNP
rs181856925 1774 dbSNP
rs377621739 1783 dbSNP
rs1157467319 1786 dbSNP
rs950907976 1786 dbSNP
rs1406666537 1787 dbSNP
rs1027802004 1796 dbSNP
rs973446035 1797 dbSNP
rs557631486 1806 dbSNP
rs1289316240 1810 dbSNP
rs1384825348 1811 dbSNP
rs1309434099 1816 dbSNP
rs1317687053 1818 dbSNP
rs959460749 1832 dbSNP
rs537665228 1834 dbSNP
rs57607344 1853 dbSNP
rs755099398 1854 dbSNP
rs906561984 1860 dbSNP
rs1020868457 1861 dbSNP
rs1009924089 1867 dbSNP
rs77700592 1874 dbSNP
rs1349912979 1876 dbSNP
rs893629847 1877 dbSNP
rs917368371 1883 dbSNP
rs534749524 1886 dbSNP
rs956097993 1889 dbSNP
rs534612076 1890 dbSNP
rs1163788769 1900 dbSNP
rs1377924338 1903 dbSNP
rs1425954060 1904 dbSNP
rs1459491249 1908 dbSNP
rs1364819312 1921 dbSNP
rs1413907070 1924 dbSNP
rs1159618010 1934 dbSNP
rs567252538 1936 dbSNP
rs1053632903 1944 dbSNP
rs1374419410 1947 dbSNP
rs932367258 1953 dbSNP
rs1307285054 1959 dbSNP
rs1248305800 1965 dbSNP
rs1246712552 1966 dbSNP
rs1291707919 1972 dbSNP
rs1357907049 1973 dbSNP
rs1207144335 1975 dbSNP
rs1252218805 1977 dbSNP
rs1193033279 1981 dbSNP
rs565615861 1982 dbSNP
rs899585246 1985 dbSNP
rs1488868141 1993 dbSNP
rs1194896376 1995 dbSNP
rs1040697950 2000 dbSNP
rs1235935576 2010 dbSNP
rs1445932290 2029 dbSNP
rs1183611033 2032 dbSNP
rs1206791780 2037 dbSNP
rs1384600228 2043 dbSNP
rs1246154023 2045 dbSNP
rs1172323623 2048 dbSNP
rs1354915064 2049 dbSNP
rs943708189 2057 dbSNP
rs908241067 2067 dbSNP
rs549022552 2070 dbSNP
rs537264339 2072 dbSNP
rs1408492406 2073 dbSNP
rs1453544659 2074 dbSNP
rs762692438 2076 dbSNP
rs766577149 2081 dbSNP
rs920732865 2084 dbSNP
rs1216807652 2085 dbSNP
rs1296861948 2093 dbSNP
rs1269238391 2095 dbSNP
rs1228142978 2107 dbSNP
rs1197070549 2118 dbSNP
rs1315704594 2123 dbSNP
rs973546017 2129 dbSNP
rs1462371308 2132 dbSNP
rs1203829369 2136 dbSNP
rs1241955985 2138 dbSNP
rs964999569 2144 dbSNP
rs1387806737 2145 dbSNP
rs1420054181 2151 dbSNP
rs1427716157 2158 dbSNP
rs1367708173 2163 dbSNP
rs1431806536 2177 dbSNP
rs1470406625 2178 dbSNP
rs1324558126 2179 dbSNP
rs777195802 2193 dbSNP
rs959415645 2195 dbSNP
rs1033717478 2196 dbSNP
rs1018266614 2199 dbSNP
rs982644884 2201 dbSNP
rs549010023 2202 dbSNP
rs769120129 2206 dbSNP
rs1432930175 2211 dbSNP
rs189603678 2222 dbSNP
rs1006600708 2228 dbSNP
rs551543549 2229 dbSNP
rs763271485 2234 dbSNP
rs1325295912 2244 dbSNP
rs1223725191 2245 dbSNP
rs1277425516 2250 dbSNP
rs1309936774 2255 dbSNP
rs773614307 2275 dbSNP
rs1242688959 2276 dbSNP
rs1029446852 2292 dbSNP
rs993930675 2299 dbSNP
rs1270747839 2309 dbSNP
rs1480612064 2314 dbSNP
rs369686631 2320 dbSNP
rs1176019777 2335 dbSNP
rs1433645134 2351 dbSNP
rs533485791 2352 dbSNP
rs559615493 2359 dbSNP
rs1466465430 2366 dbSNP
rs1005762196 2373 dbSNP
rs780447249 2378 dbSNP
rs1032137616 2394 dbSNP
rs996689152 2404 dbSNP
rs1346571819 2412 dbSNP
rs1208302685 2415 dbSNP
rs183747398 2438 dbSNP
rs762336506 2439 dbSNP
rs1342416344 2440 dbSNP
rs1225036126 2445 dbSNP
rs1234605977 2446 dbSNP
rs1312116414 2447 dbSNP
rs917264081 2458 dbSNP
rs1214386295 2459 dbSNP
rs1040794157 2460 dbSNP
rs1231417357 2461 dbSNP
rs191605667 2465 dbSNP
rs886764632 2466 dbSNP
rs925997756 2473 dbSNP
rs528887308 2481 dbSNP
rs772573586 2482 dbSNP
rs1417890081 2487 dbSNP
rs910829480 2496 dbSNP
rs929550530 2497 dbSNP
rs1424488387 2510 dbSNP
rs920854571 2512 dbSNP
rs1443896710 2515 dbSNP
rs1279718717 2519 dbSNP
rs1375556970 2522 dbSNP
rs1256768997 2531 dbSNP
rs1317096481 2534 dbSNP
rs1374760309 2544 dbSNP
rs189464060 2550 dbSNP
rs1209091439 2554 dbSNP
rs796956612 2559 dbSNP
rs926817304 2562 dbSNP
rs972352250 2570 dbSNP
rs961160029 2579 dbSNP
rs982207764 2582 dbSNP
rs971235833 2587 dbSNP
rs1437916980 2589 dbSNP
rs569630485 2591 dbSNP
rs1192762743 2594 dbSNP
rs1017085411 2610 dbSNP
rs1472738713 2617 dbSNP
rs1161877321 2618 dbSNP
rs1426890359 2620 dbSNP
rs1258777580 2627 dbSNP
rs1329130198 2630 dbSNP
rs913881261 2633 dbSNP
rs1005421573 2639 dbSNP
rs1316531745 2645 dbSNP
rs1383496239 2649 dbSNP
rs1243952597 2654 dbSNP
rs184581691 2655 dbSNP
rs905672741 2657 dbSNP
rs745937612 2658 dbSNP
rs543868870 2661 dbSNP
rs1022863350 2665 dbSNP
rs771621756 2669 dbSNP
rs1201369965 2674 dbSNP
rs1214878661 2675 dbSNP
rs1257726414 2676 dbSNP
rs1456605673 2682 dbSNP
rs1205691615 2691 dbSNP
rs1243797798 2696 dbSNP
rs1441864181 2703 dbSNP
rs957905191 2706 dbSNP
rs1485657093 2707 dbSNP
rs745440999 2713 dbSNP
rs576435598 2714 dbSNP
rs895701268 2715 dbSNP
rs778959123 2716 dbSNP
rs1170392977 2717 dbSNP
rs1343711618 2725 dbSNP
rs996803770 2726 dbSNP
rs1338193465 2730 dbSNP
rs963850460 2735 dbSNP
rs143958002 2741 dbSNP
rs1332129053 2742 dbSNP
rs112531736 2747 dbSNP
rs1226247354 2748 dbSNP
rs1431286457 2760 dbSNP
rs1007948961 2767 dbSNP
rs545216586 2772 dbSNP
rs1316346078 2774 dbSNP
rs770541915 2776 dbSNP
rs1324319600 2786 dbSNP
rs1314680435 2792 dbSNP
rs1046695551 2797 dbSNP
rs904646630 2799 dbSNP
rs1396370965 2802 dbSNP
rs1198745333 2803 dbSNP
rs551299954 2832 dbSNP
rs1311018033 2841 dbSNP
rs578034552 2842 dbSNP
rs1037899367 2846 dbSNP
rs76653699 2847 dbSNP
rs938297561 2848 dbSNP
rs926766586 2853 dbSNP
rs943579122 2869 dbSNP
rs553257199 2870 dbSNP
rs1178185733 2872 dbSNP
rs987614030 2874 dbSNP
rs949459543 2879 dbSNP
rs1370392034 2881 dbSNP
rs1465156170 2883 dbSNP
rs754331089 2884 dbSNP
rs1170287713 2885 dbSNP
rs540681236 2891 dbSNP
rs1387095356 2893 dbSNP
rs1400507487 2896 dbSNP
rs1188726027 2897 dbSNP
rs149892527 2903 dbSNP
rs988275352 2904 dbSNP
rs555194618 2907 dbSNP
rs972426511 2908 dbSNP
rs1262538830 2911 dbSNP
rs958019991 2912 dbSNP
rs1216553433 2916 dbSNP
rs1273177482 2926 dbSNP
rs1490945269 2938 dbSNP
rs369498843 2942 dbSNP
rs984262606 2945 dbSNP
rs1432200912 2946 dbSNP
rs975313915 2955 dbSNP
rs1022758397 2968 dbSNP
rs1419729953 2969 dbSNP
rs1014010796 2974 dbSNP
rs963968481 2977 dbSNP
rs192939569 2985 dbSNP
rs777743637 2986 dbSNP
rs895773329 2993 dbSNP
rs756049090 2996 dbSNP
rs569401276 2997 dbSNP
rs1385287587 2999 dbSNP
rs1354595910 3001 dbSNP
rs1239438354 3003 dbSNP
rs137967623 3004 dbSNP
rs60418766 3005 dbSNP
rs1265200811 3006 dbSNP
rs904509768 3019 dbSNP
rs139383425 3024 dbSNP
rs943466700 3040 dbSNP
rs1025814126 3044 dbSNP
rs1328327747 3047 dbSNP
rs564759920 3062 dbSNP
rs898154177 3074 dbSNP
rs1051941787 3091 dbSNP
rs1392924908 3093 dbSNP
rs1055403934 3094 dbSNP
rs1165282817 3098 dbSNP
rs1367703857 3115 dbSNP
rs529290790 3117 dbSNP
rs933466814 3126 dbSNP
rs1401235879 3127 dbSNP
rs1446214591 3130 dbSNP
rs919546907 3135 dbSNP
rs1229414283 3141 dbSNP
rs972289158 3145 dbSNP
rs1461069456 3149 dbSNP
rs749485321 3151 dbSNP
rs1229999370 3155 dbSNP
rs905447282 3165 dbSNP
rs1457931253 3166 dbSNP
rs777582445 3168 dbSNP
rs1462230770 3184 dbSNP
rs1182411029 3186 dbSNP
rs568468096 3187 dbSNP
rs909550074 3188 dbSNP
rs1421853073 3189 dbSNP
rs1404421646 3190 dbSNP
rs1424651434 3196 dbSNP
rs1465275721 3201 dbSNP
rs549893324 3204 dbSNP
rs1168729101 3222 dbSNP
rs1161822279 3234 dbSNP
rs1448761012 3248 dbSNP
rs949574201 3252 dbSNP
rs546970058 3262 dbSNP
rs1052499328 3268 dbSNP
rs936765199 3273 dbSNP
rs1384342338 3274 dbSNP
rs1279201884 3281 dbSNP
rs1318215754 3284 dbSNP
rs925245560 3285 dbSNP
rs1180521702 3286 dbSNP
rs1255719698 3287 dbSNP
rs1435589892 3292 dbSNP
rs1268765899 3306 dbSNP
rs1210141891 3309 dbSNP
rs975429697 3310 dbSNP
rs1213934415 3311 dbSNP
rs1333700191 3324 dbSNP
rs942554375 3334 dbSNP
rs368741065 3347 dbSNP
rs1263655779 3349 dbSNP
rs1477348636 3351 dbSNP
rs150875348 3365 dbSNP
rs1415169155 3378 dbSNP
rs755888867 3378 dbSNP
rs188257582 3380 dbSNP
rs959847945 3381 dbSNP
rs1031578790 3385 dbSNP
rs1299294144 3388 dbSNP
rs999191698 3390 dbSNP
rs1340332423 3391 dbSNP
rs968641027 3394 dbSNP
rs1275932094 3398 dbSNP
rs1369274459 3400 dbSNP
rs1025504679 3401 dbSNP
rs559701183 3408 dbSNP
rs1277262468 3411 dbSNP
rs1332924472 3419 dbSNP
rs1309881164 3425 dbSNP
rs973766845 3426 dbSNP
rs1286564897 3429 dbSNP
rs962454944 3442 dbSNP
rs889237742 3444 dbSNP
rs758638395 3449 dbSNP
rs1001165388 3450 dbSNP
rs997706916 3453 dbSNP
rs184422557 3454 dbSNP
rs1420918228 3456 dbSNP
rs1159791858 3463 dbSNP
rs750743465 3466 dbSNP
rs1360387121 3471 dbSNP
rs1458068332 3476 dbSNP
rs1025643908 3477 dbSNP
rs897981213 3484 dbSNP
rs1305338326 3494 dbSNP
rs752490175 3497 dbSNP
rs1013859411 3498 dbSNP
rs892613054 3506 dbSNP
rs1273836060 3511 dbSNP
rs767373401 3513 dbSNP
rs372887897 3517 dbSNP
rs762246598 3519 dbSNP
rs1309959095 3525 dbSNP
rs192423734 3534 dbSNP
rs565492403 3535 dbSNP
rs1048571032 3540 dbSNP
rs1291732487 3541 dbSNP
rs1193695671 3543 dbSNP
rs948388893 3547 dbSNP
rs915686688 3552 dbSNP
rs1467787130 3557 dbSNP
rs903940437 3559 dbSNP
rs1039691299 3562 dbSNP
rs777194194 3564 dbSNP
rs555381186 3565 dbSNP
rs368976844 3567 dbSNP
rs929923927 3574 dbSNP
rs756404857 3578 dbSNP
rs754881161 3583 dbSNP
rs1283227598 3602 dbSNP
rs575735018 3613 dbSNP
rs1347035574 3630 dbSNP
rs1331397486 3631 dbSNP
rs1376133680 3632 dbSNP
rs969048192 3643 dbSNP
rs117029878 3645 dbSNP
rs764551556 3658 dbSNP
rs372117294 3659 dbSNP
rs1288065146 3661 dbSNP
rs1030447482 3672 dbSNP
rs1034056027 3680 dbSNP
rs997611958 3682 dbSNP
rs897886447 3685 dbSNP
rs979859261 3686 dbSNP
rs565905162 3687 dbSNP
rs1431680523 3688 dbSNP
rs554048325 3690 dbSNP
rs971451351 3691 dbSNP
rs1036948666 3694 dbSNP
rs1161795497 3695 dbSNP
rs1344976250 3697 dbSNP
rs1415299332 3704 dbSNP
rs536179424 3708 dbSNP
rs1170874003 3709 dbSNP
rs1416708069 3716 dbSNP
rs1398926219 3726 dbSNP
rs1403502898 3727 dbSNP
rs1443886670 3729 dbSNP
rs568652066 3736 dbSNP
rs187952119 3739 dbSNP
rs1447062994 3741 dbSNP
rs1014222875 3746 dbSNP
rs1320339598 3755 dbSNP
rs1392665869 3764 dbSNP
rs1190130571 3772 dbSNP
rs1257623666 3779 dbSNP
rs531693120 3782 dbSNP
rs570969568 3791 dbSNP
rs1475500866 3800 dbSNP
rs1316171682 3802 dbSNP
rs1241375783 3811 dbSNP
rs1280004470 3812 dbSNP
rs892736560 3819 dbSNP
rs1213370616 3840 dbSNP
rs1442347655 3846 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 167465.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugcaaaUUUAAAGUGGGGAAGa 5'
                |||    |||||||| 
Target 5' -----cAAA----ACCCCUUCu 3'
1 - 13
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 167465.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugcaaaUUUAAAGUGGGGAAGa 5'
                |||    |||||||| 
Target 5' ------AAA----ACCCCUUCu 3'
1 - 12
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000318442.5 | 3UTR | CAAAACCCCUUCUCUACUAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000318442.5 | 3UTR | AAAACCCCUUCUCUACUAAAAAUACAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
133 hsa-miR-3179 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT102087 GIGYF1 GRB10 interacting GYF protein 1 2 4
MIRT110061 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 6
MIRT112198 BTG2 BTG anti-proliferation factor 2 2 2
MIRT117668 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT146657 MINK1 misshapen like kinase 1 2 2
MIRT175505 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT180535 TXNIP thioredoxin interacting protein 2 2
MIRT190624 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT190650 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT366902 NONO non-POU domain containing octamer binding 2 2
MIRT443554 ZFP3 ZFP3 zinc finger protein 2 2
MIRT445953 MLLT11 MLLT11, transcription factor 7 cofactor 2 2
MIRT446042 HMCN1 hemicentin 1 2 2
MIRT447968 MSH6 mutS homolog 6 2 2
MIRT448634 ONECUT1 one cut homeobox 1 2 2
MIRT449316 MRO maestro 2 2
MIRT451380 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451547 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451807 CDCA3 cell division cycle associated 3 2 4
MIRT451916 ILK integrin linked kinase 2 2
MIRT451938 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT452189 KIAA1456 KIAA1456 2 2
MIRT452498 HMGXB3 HMG-box containing 3 2 2
MIRT452548 ZNF467 zinc finger protein 467 2 2
MIRT453844 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT454515 ZFYVE27 zinc finger FYVE-type containing 27 2 2
MIRT455363 KDM5C lysine demethylase 5C 2 2
MIRT455455 EPB41L4B erythrocyte membrane protein band 4.1 like 4B 2 2
MIRT455628 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 10
MIRT455639 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 10
MIRT455690 GLO1 glyoxalase I 2 2
MIRT456300 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT456784 MTHFSD methenyltetrahydrofolate synthetase domain containing 2 2
MIRT456819 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT457566 ZNF34 zinc finger protein 34 2 2
MIRT457604 IDS iduronate 2-sulfatase 2 2
MIRT458236 NXPH3 neurexophilin 3 2 2
MIRT458313 TNFAIP8L3 TNF alpha induced protein 8 like 3 2 2
MIRT458350 NOC2L NOC2 like nucleolar associated transcriptional repressor 2 2
MIRT458670 GPR35 G protein-coupled receptor 35 2 2
MIRT459675 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT461126 RAB36 RAB36, member RAS oncogene family 2 2
MIRT461918 NECAB3 N-terminal EF-hand calcium binding protein 3 2 2
MIRT462301 PPM1H protein phosphatase, Mg2+/Mn2+ dependent 1H 2 2
MIRT463520 ZBTB7B zinc finger and BTB domain containing 7B 2 2
MIRT464378 URM1 ubiquitin related modifier 1 2 2
MIRT464614 UBE4B ubiquitination factor E4B 2 2
MIRT464711 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT465520 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465974 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT466058 TMEM189 transmembrane protein 189 2 2
MIRT466548 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT466647 TAGLN2 transgelin 2 2 2
MIRT467357 SP2 Sp2 transcription factor 2 2
MIRT468744 SDC2 syndecan 2 2 2
MIRT470244 PRRC2A proline rich coiled-coil 2A 2 2
MIRT471426 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT471732 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 2 2
MIRT472190 NHP2L1 small nuclear ribonucleoprotein 13 2 2
MIRT472450 NAV2 neuron navigator 2 2 6
MIRT474563 KLHDC3 kelch domain containing 3 2 2
MIRT474936 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT475165 IP6K1 inositol hexakisphosphate kinase 1 2 2
MIRT475399 ICMT isoprenylcysteine carboxyl methyltransferase 2 4
MIRT475426 ICK intestinal cell kinase 2 2
MIRT477090 FAM168A family with sequence similarity 168 member A 2 2
MIRT478458 DAB2 DAB2, clathrin adaptor protein 2 2
MIRT478953 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT480096 CALR calreticulin 2 2
MIRT481924 ANKRD33B ankyrin repeat domain 33B 2 2
MIRT483217 APOA1 apolipoprotein A1 2 6
MIRT483882 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT483923 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 2
MIRT483942 LENG8 leukocyte receptor cluster member 8 2 4
MIRT484209 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT484512 SYT7 synaptotagmin 7 2 2
MIRT484709 RNF11 ring finger protein 11 2 2
MIRT485356 MYO1C myosin IC 2 4
MIRT485615 FOSL1 FOS like 1, AP-1 transcription factor subunit 2 4
MIRT486584 ZNF619 zinc finger protein 619 2 2
MIRT487013 C2orf82 chromosome 2 open reading frame 82 2 2
MIRT487621 C20orf96 chromosome 20 open reading frame 96 2 2
MIRT487801 GPR20 G protein-coupled receptor 20 2 4
MIRT488134 GPR107 G protein-coupled receptor 107 2 2
MIRT488773 FXYD1 FXYD domain containing ion transport regulator 1 2 2
MIRT488854 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT489783 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT490102 FN3K fructosamine 3 kinase 2 2
MIRT490389 LHFPL3 LHFPL tetraspan subfamily member 3 2 2
MIRT490434 MYL9 myosin light chain 9 2 2
MIRT490451 GLUD1 glutamate dehydrogenase 1 2 2
MIRT490880 OSBP oxysterol binding protein 2 2
MIRT491037 ALPK3 alpha kinase 3 2 2
MIRT491250 HCN2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 2 2
MIRT491748 SEMA3F semaphorin 3F 2 2
MIRT492235 SLC48A1 solute carrier family 48 member 1 2 2
MIRT492490 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 2
MIRT492505 RANBP10 RAN binding protein 10 2 4
MIRT492773 PDGFB platelet derived growth factor subunit B 2 2
MIRT492922 NFAT5 nuclear factor of activated T-cells 5 2 2
MIRT493459 ITFG3 family with sequence similarity 234 member A 2 2
MIRT493654 HDLBP high density lipoprotein binding protein 2 2
MIRT494011 DUSP9 dual specificity phosphatase 9 2 2
MIRT499412 PLCG2 phospholipase C gamma 2 2 4
MIRT499552 C15orf43 telomere repeat binding bouquet formation protein 2 2 2
MIRT501836 NCOA2 nuclear receptor coactivator 2 2 2
MIRT501950 MAT2A methionine adenosyltransferase 2A 2 10
MIRT504066 KCTD12 potassium channel tetramerization domain containing 12 2 4
MIRT504509 PPP1R9B protein phosphatase 1 regulatory subunit 9B 2 2
MIRT508466 HOXB6 homeobox B6 2 4
MIRT512373 CPM carboxypeptidase M 2 2
MIRT513578 EVX1 even-skipped homeobox 1 2 2
MIRT517763 ZNF366 zinc finger protein 366 2 4
MIRT519773 ZNF354B zinc finger protein 354B 2 8
MIRT523568 GGCX gamma-glutamyl carboxylase 2 4
MIRT532802 CLDN11 claudin 11 2 2
MIRT544299 TSPYL1 TSPY like 1 2 2
MIRT544862 MYH2 myosin heavy chain 2 2 4
MIRT556731 KLHL15 kelch like family member 15 2 4
MIRT564347 AKR1B10 aldo-keto reductase family 1 member B10 2 2
MIRT568924 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT569012 CXorf36 chromosome X open reading frame 36 2 2
MIRT569256 FAM129B family with sequence similarity 129 member B 2 2
MIRT569591 PRELP proline and arginine rich end leucine rich repeat protein 2 2
MIRT569779 SAMD14 sterile alpha motif domain containing 14 2 2
MIRT570034 FAM228A family with sequence similarity 228 member A 2 2
MIRT573803 FRMPD4 FERM and PDZ domain containing 4 2 2
MIRT574190 ZNF264 zinc finger protein 264 2 2
MIRT576153 Hmox1 heme oxygenase 1 2 2
MIRT611311 CA8 carbonic anhydrase 8 2 4
MIRT673429 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT674976 SH3BP2 SH3 domain binding protein 2 2 2
MIRT692712 MEAF6 MYST/Esa1 associated factor 6 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3179 Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-3179 Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3179 Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-3179 Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-3179 Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-3179 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3179 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-3179 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

Error report submission