miRTarBase - #MIRT518215


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pre-miRNA Information
pre-miRNA hsa-mir-4781   
Genomic Coordinates chr1: 54054079 - 54054154
Description Homo sapiens miR-4781 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4781-3p
Sequence 46| AAUGUUGGAAUCCUCGCUAGAG |67
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs968609764 2 dbSNP
rs899910686 3 dbSNP
rs74085143 4 dbSNP
rs550946107 8 dbSNP
rs747064911 10 dbSNP
rs1352517651 13 dbSNP
rs1436072914 22 dbSNP
Putative Targets

Gene Information
Gene Symbol TRMT10B   
Synonyms RG9MTD3, bA3J10.9
Description tRNA methyltransferase 10B
Transcript NM_144964   
Expression
Putative miRNA Targets on TRMT10B
3'UTR of TRMT10B
(miRNA target sites are highlighted)		 
>TRMT10B|NM_144964|3'UTR
   1 TGGGCCTAAGATTGCAGCTGCGTGGCCAGGTGCTCACGCCGTAATGCCAACACTTTGGTAGACCGAAGTGGGCAGATCAC
  81 CTGAGGTCAGGAGTTCACGACCAGCCTGGCCAACATGGTGAAACCCTTCTCTACTGAAAATACAAAAATTAGCCAGGTGT
 161 GGTGGCGCATACCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACTCGGGAGGCGAAGGTTGCAG
 241 TGAGCCGAGATTTCACCAGTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAATAAATAAAAAAAA
 321 ATGCAGCTGCAGGAGTGAGGCGCTTGGAGGTACCTTGACCCAAAGAGCAGGGCAGAGGGTGGCAGTGGCACATAGGCAAG
 401 TGTCTTTGCATGACATCTTCTCAGAGCTTCACAATAATGTCAGGGACCACATTTAATGCTTTTTAATCTCCCATAGTGCC
 481 TGGCTCACAGGAAGTGCTCAGATATGTTAAGTAATAAAAAGTTAATGTGGTGGGTGCAGTGGCTCACGCCTGTAATCCCA
 561 GCACTTTGGGAGGCTGAGGTGAGTGGATTACAAGGTCAGGAGTTCCAGACCAGCCTGGCTAATATGGTGAAACCTCGTCT
 641 CTACTAAAAATACAAAAATTAGCTGGGCATGGTGGTGCGTGCCTGTAGTCTCAGCTACTCAGGAGGCTGAGGCAGGAGAA
 721 TCGCCTGAACCCGGGCGGCGGAGGTTGTAGTGAGCCAAGATCCAGCCTGGGCGACAGAGCCAGACTCTTGTCTCGAGGGG
 801 AAAAAAAAAAAAAATTATGTAACAAGGAATTAGCCTCAAAACCACATGGCTTTGGACGTGCTAATTCAACTTTTGTACAT
 881 CTATTTGTGAGAGACCTCTTGAAATTGTTTAAATGGTTACATCAAGAGTTTAATATTCACTAAACTGGCATCATAAAATT
 961 GTATGACTTTCTCCAGCCTTGTCTGATCATGCTCGTTGTTGCCCAGCTCAGTAATAAGCTTTGCAGGATCCAGCCTGTTC
1041 TGACCTATCCCTACTGAGTCCCCATAGCATTTTGTTCCCTCCTGTGGCTCTTACCTTGTTCTCCCTTGCAGAGTATGGGC
1121 ATGGAGGGCTTCTCTTCCTAATCCTTCCTAATGGTAGGATCCTAACAGGACAAATCTGTGTACCTATCTTTCTATCCTCC
1201 CTGAGCCTGTACCAACTAGATTCTTCATATGTATTTGTAACAGATTAAATTGGAAAGCAAACACAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaGAUCGCUCCUAAGGUUGUAa 5'
            | |||  ||   ||||||| 
Target 5' gaCCAGCCTGG---CCAACATg 3'
 99 - 117 149.00 -11.40
2 
miRNA  3' gaGAUCGC--UCCUAAGGUUGUaa 5'
            ||| :|  ||||| |:||||  
Target 5' tcCTAATGGTAGGATCCTAACAgg 3'
 1146 - 1169 134.00 -12.80
3 
miRNA  3' gaGAUCGCUCC--UAAGGUUGUaa 5'
            ||  ||  |  || ||||||  
Target 5' tgCTCACGCCGTAATGCCAACAct 3'
 31 - 54 130.00 -10.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31525620 10 COSMIC
COSN26556927 15 COSMIC
COSN28859628 64 COSMIC
COSN30495896 66 COSMIC
COSN24401830 74 COSMIC
COSN30176897 76 COSMIC
COSN30169002 118 COSMIC
COSN30481573 119 COSMIC
COSN30160386 121 COSMIC
COSN31598942 125 COSMIC
COSN31583133 147 COSMIC
COSN25286408 150 COSMIC
COSN28837702 168 COSMIC
COSN20188659 317 COSMIC
COSN26750847 816 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1200843009 2 dbSNP
rs1354329059 3 dbSNP
rs755580875 6 dbSNP
rs370258442 7 dbSNP
rs757056144 8 dbSNP
rs184125230 12 dbSNP
rs1203130191 13 dbSNP
rs915249421 17 dbSNP
rs1260958846 18 dbSNP
rs745579597 19 dbSNP
rs1484189668 20 dbSNP
rs990387517 21 dbSNP
rs373447531 22 dbSNP
rs149676917 23 dbSNP
rs1471510889 27 dbSNP
rs1231626698 31 dbSNP
rs1328878469 31 dbSNP
rs199679803 34 dbSNP
rs777044617 38 dbSNP
rs765588924 39 dbSNP
rs528982520 40 dbSNP
rs371287651 41 dbSNP
rs114184947 42 dbSNP
rs923653352 45 dbSNP
rs1426784032 47 dbSNP
rs1336699765 49 dbSNP
rs944898341 50 dbSNP
rs752030342 52 dbSNP
rs755668849 53 dbSNP
rs768946729 57 dbSNP
rs1464443823 58 dbSNP
rs565665181 65 dbSNP
rs889429792 66 dbSNP
rs1006789361 70 dbSNP
rs1473609032 74 dbSNP
rs1181654365 78 dbSNP
rs1317540936 81 dbSNP
rs1048053484 86 dbSNP
rs200818309 89 dbSNP
rs376323686 89 dbSNP
rs1282409897 99 dbSNP
rs555067999 102 dbSNP
rs1225675932 107 dbSNP
rs548082539 117 dbSNP
rs1282469714 119 dbSNP
rs762226091 124 dbSNP
rs898366545 125 dbSNP
rs1286076401 137 dbSNP
rs1222428936 142 dbSNP
rs1340871716 144 dbSNP
rs994365931 151 dbSNP
rs1394041822 159 dbSNP
rs1401488217 167 dbSNP
rs766047702 168 dbSNP
rs1241845699 170 dbSNP
rs1458896840 175 dbSNP
rs1409761525 180 dbSNP
rs1158743095 186 dbSNP
rs906350513 189 dbSNP
rs1025735052 198 dbSNP
rs1239407387 207 dbSNP
rs1199405101 209 dbSNP
rs1442192867 223 dbSNP
rs971858746 224 dbSNP
rs1249204985 229 dbSNP
rs573624870 230 dbSNP
rs1330648446 231 dbSNP
rs1034379154 245 dbSNP
rs147770975 247 dbSNP
rs1031075380 248 dbSNP
rs1285583468 251 dbSNP
rs990441326 252 dbSNP
rs956752316 253 dbSNP
rs914788413 257 dbSNP
rs878901430 262 dbSNP
rs1022227651 263 dbSNP
rs773913435 278 dbSNP
rs1163672883 280 dbSNP
rs1367304130 285 dbSNP
rs1320029943 293 dbSNP
rs1405995435 298 dbSNP
rs537454768 298 dbSNP
rs953391789 298 dbSNP
rs1391129460 305 dbSNP
rs759059922 305 dbSNP
rs539599418 306 dbSNP
rs529803254 307 dbSNP
rs1463975927 308 dbSNP
rs556713669 309 dbSNP
rs972608868 309 dbSNP
rs1291591600 313 dbSNP
rs1358501004 313 dbSNP
rs777538838 313 dbSNP
rs570090856 314 dbSNP
rs1230308824 316 dbSNP
rs371620956 317 dbSNP
rs555368323 323 dbSNP
rs1437299075 324 dbSNP
rs1444173452 327 dbSNP
rs1212027857 332 dbSNP
rs1321866662 335 dbSNP
rs1048187060 337 dbSNP
rs773212233 340 dbSNP
rs1371377325 342 dbSNP
rs910919973 343 dbSNP
rs909536748 344 dbSNP
rs1192220935 346 dbSNP
rs1390161456 346 dbSNP
rs1246716692 350 dbSNP
rs1478070573 359 dbSNP
rs947737989 362 dbSNP
rs1218953681 364 dbSNP
rs1490098050 367 dbSNP
rs942366343 368 dbSNP
rs1274872142 372 dbSNP
rs188915371 383 dbSNP
rs1339737605 387 dbSNP
rs1357461780 391 dbSNP
rs752642175 397 dbSNP
rs1222358150 400 dbSNP
rs540940363 411 dbSNP
rs773792468 416 dbSNP
rs939288493 419 dbSNP
rs1052178448 423 dbSNP
rs1428233315 427 dbSNP
rs929839062 427 dbSNP
rs1010916257 428 dbSNP
rs1469318050 432 dbSNP
rs557593722 433 dbSNP
rs1416605981 434 dbSNP
rs1047312815 435 dbSNP
rs1188990426 437 dbSNP
rs1022363540 440 dbSNP
rs1183811881 447 dbSNP
rs1481968812 453 dbSNP
rs907022341 458 dbSNP
rs1210537490 469 dbSNP
rs1002993476 472 dbSNP
rs1442278585 474 dbSNP
rs1162827314 488 dbSNP
rs1223048783 491 dbSNP
rs1034432909 497 dbSNP
rs1290444894 498 dbSNP
rs1408186288 498 dbSNP
rs1018954857 501 dbSNP
rs1303839536 502 dbSNP
rs117790370 503 dbSNP
rs576021501 503 dbSNP
rs1011551392 504 dbSNP
rs543300774 505 dbSNP
rs1021893088 506 dbSNP
rs763922984 510 dbSNP
rs1416990718 511 dbSNP
rs1182304020 522 dbSNP
rs1406753110 522 dbSNP
rs1353769749 524 dbSNP
rs369234970 527 dbSNP
rs1235680998 533 dbSNP
rs563490511 540 dbSNP
rs1465422532 546 dbSNP
rs977685872 548 dbSNP
rs529015086 549 dbSNP
rs1313702671 551 dbSNP
rs1230445579 560 dbSNP
rs753683209 572 dbSNP
rs546401096 579 dbSNP
rs1436396998 588 dbSNP
rs181468017 597 dbSNP
rs1052314906 603 dbSNP
rs1450986362 605 dbSNP
rs779174017 611 dbSNP
rs1164962708 615 dbSNP
rs1425344481 615 dbSNP
rs1194383606 618 dbSNP
rs986550916 620 dbSNP
rs1272722345 626 dbSNP
rs1450065415 627 dbSNP
rs1249784652 635 dbSNP
rs910929950 637 dbSNP
rs1485577882 638 dbSNP
rs1266275911 643 dbSNP
rs1223999836 647 dbSNP
rs1179696031 652 dbSNP
rs946574984 675 dbSNP
rs1043786209 676 dbSNP
rs1229555016 678 dbSNP
rs564695211 680 dbSNP
rs1296026367 683 dbSNP
rs1380037470 684 dbSNP
rs375936502 686 dbSNP
rs1244644297 693 dbSNP
rs141889932 699 dbSNP
rs368969469 715 dbSNP
rs919872079 717 dbSNP
rs929905874 720 dbSNP
rs1046967434 723 dbSNP
rs147110281 724 dbSNP
rs1392012627 725 dbSNP
rs938457068 731 dbSNP
rs573371899 733 dbSNP
rs1476358453 734 dbSNP
rs571104138 737 dbSNP
rs747459336 738 dbSNP
rs533667885 740 dbSNP
rs879654578 741 dbSNP
rs984993682 743 dbSNP
rs1338891046 747 dbSNP
rs1344682832 753 dbSNP
rs1273109537 757 dbSNP
rs1227296881 765 dbSNP
rs1023139288 770 dbSNP
rs1404229953 771 dbSNP
rs550141104 773 dbSNP
rs980563018 774 dbSNP
rs927589275 776 dbSNP
rs549849149 779 dbSNP
rs1166108731 782 dbSNP
rs1225868007 783 dbSNP
rs1378101481 785 dbSNP
rs1461464167 785 dbSNP
rs939058091 788 dbSNP
rs12000618 790 dbSNP
rs45539136 795 dbSNP
rs1183079808 796 dbSNP
rs946544012 797 dbSNP
rs62539385 798 dbSNP
rs1320975772 799 dbSNP
rs1199329848 800 dbSNP
rs1043501078 801 dbSNP
rs1320728720 801 dbSNP
rs565743397 801 dbSNP
rs573092925 801 dbSNP
rs760136822 801 dbSNP
rs534655203 802 dbSNP
rs943420717 803 dbSNP
rs986227121 805 dbSNP
rs1017991293 806 dbSNP
rs1326651469 819 dbSNP
rs1040492438 820 dbSNP
rs187017641 821 dbSNP
rs963739987 823 dbSNP
rs1468301327 826 dbSNP
rs1428630224 829 dbSNP
rs973831157 842 dbSNP
rs919619477 850 dbSNP
rs993538627 851 dbSNP
rs1048003120 854 dbSNP
rs951076923 859 dbSNP
rs1362248741 865 dbSNP
rs1443342292 870 dbSNP
rs1258891379 876 dbSNP
rs1190909748 882 dbSNP
rs1459614712 883 dbSNP
rs1262415982 885 dbSNP
rs1480620048 886 dbSNP
rs983107814 890 dbSNP
rs1178333812 895 dbSNP
rs1352479422 900 dbSNP
rs1277394239 902 dbSNP
rs1238075991 904 dbSNP
rs887997585 906 dbSNP
rs1336121859 916 dbSNP
rs1427391676 918 dbSNP
rs1450291230 922 dbSNP
rs1405242377 924 dbSNP
rs751027301 929 dbSNP
rs1321353634 942 dbSNP
rs1458885817 943 dbSNP
rs928536920 953 dbSNP
rs115239380 958 dbSNP
rs1473334183 962 dbSNP
rs1370523607 963 dbSNP
rs1387189802 968 dbSNP
rs1055614643 972 dbSNP
rs1444603624 979 dbSNP
rs1249184187 984 dbSNP
rs1208869640 986 dbSNP
rs1281700303 995 dbSNP
rs1448162317 995 dbSNP
rs537339002 996 dbSNP
rs1356808656 998 dbSNP
rs1316964971 1012 dbSNP
rs1243466029 1017 dbSNP
rs1382032992 1026 dbSNP
rs1298230580 1028 dbSNP
rs35930238 1030 dbSNP
rs915732055 1038 dbSNP
rs556906426 1046 dbSNP
rs1324694931 1051 dbSNP
rs937763462 1053 dbSNP
rs1406121781 1054 dbSNP
rs573751799 1066 dbSNP
rs562049906 1068 dbSNP
rs1424407141 1070 dbSNP
rs147736590 1075 dbSNP
rs987800105 1079 dbSNP
rs913577715 1089 dbSNP
rs1190985468 1095 dbSNP
rs1407075264 1103 dbSNP
rs1239808875 1104 dbSNP
rs1191813289 1109 dbSNP
rs967915590 1119 dbSNP
rs748511512 1120 dbSNP
rs529239168 1126 dbSNP
rs1220055317 1130 dbSNP
rs1232039350 1130 dbSNP
rs1260999082 1134 dbSNP
rs770100633 1138 dbSNP
rs550722061 1146 dbSNP
rs1269726807 1150 dbSNP
rs1285139025 1159 dbSNP
rs542761510 1159 dbSNP
rs1437273935 1160 dbSNP
rs1301460826 1164 dbSNP
rs1347682686 1164 dbSNP
rs1490497781 1165 dbSNP
rs1404724110 1167 dbSNP
rs890677792 1168 dbSNP
rs1007699269 1169 dbSNP
rs1017751553 1170 dbSNP
rs1040858756 1172 dbSNP
rs1432420176 1176 dbSNP
rs1182770889 1180 dbSNP
rs1365782644 1183 dbSNP
rs1408760784 1184 dbSNP
rs1419383390 1186 dbSNP
rs923416800 1187 dbSNP
rs1478063778 1194 dbSNP
rs963500913 1202 dbSNP
rs1270615005 1208 dbSNP
rs929386366 1210 dbSNP
rs1047718343 1213 dbSNP
rs1206332523 1220 dbSNP
rs1252213555 1220 dbSNP
rs1305762647 1228 dbSNP
rs1272185915 1231 dbSNP
rs1219898176 1232 dbSNP
rs1451670900 1235 dbSNP
rs559450622 1238 dbSNP
rs1026697072 1246 dbSNP
rs1366670598 1249 dbSNP
rs142561944 1250 dbSNP
rs570758561 1251 dbSNP
rs1351312082 1254 dbSNP
rs1301881935 1258 dbSNP
rs879505964 1261 dbSNP
rs982441364 1263 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 158234.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gagaucgcuccuaaGGUUGUAa 5'
                        ||||||| 
Target 5' -----------uggCCAACAUg 3'
 		1 - 11
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000297994.3 | 3UTR | UGGCCAACAUGGUGAAACCCUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
204 hsa-miR-4781-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT071728 CCNK cyclin K 2 2
MIRT184858 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT205881 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT218699 ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 2 2
MIRT223783 OXR1 oxidation resistance 1 2 2
MIRT242435 GAN gigaxonin 2 2
MIRT306825 NCBP2 nuclear cap binding protein subunit 2 2 2
MIRT334170 CCND1 cyclin D1 2 6
MIRT339617 TMPO thymopoietin 2 2
MIRT400371 C2ORF68 chromosome 2 open reading frame 68 2 2
MIRT445533 KIF1B kinesin family member 1B 2 4
MIRT450273 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT450701 RORA RAR related orphan receptor A 2 2
MIRT451160 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT453775 NUCB1 nucleobindin 1 2 10
MIRT453884 IFRD1 interferon related developmental regulator 1 2 12
MIRT454238 OSBPL10 oxysterol binding protein like 10 2 9
MIRT458661 PAGR1 PAXIP1 associated glutamate rich protein 1 2 12
MIRT466948 STAU1 staufen double-stranded RNA binding protein 1 2 2
MIRT470278 PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 2 2
MIRT471144 PHF19 PHD finger protein 19 2 2
MIRT471873 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT476739 FOXN2 forkhead box N2 2 2
MIRT480453 C16orf72 chromosome 16 open reading frame 72 2 6
MIRT482107 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483374 CYP4A22 cytochrome P450 family 4 subfamily A member 22 2 2
MIRT484063 CYP4A11 cytochrome P450 family 4 subfamily A member 11 2 2
MIRT496329 SH3BGRL SH3 domain binding glutamate rich protein like 2 2
MIRT498659 AP3B2 adaptor related protein complex 3 beta 2 subunit 2 4
MIRT498711 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 10
MIRT499322 ZNF485 zinc finger protein 485 2 6
MIRT499711 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 10
MIRT499767 CIRH1A UTP4, small subunit processome component 2 6
MIRT499912 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 8
MIRT504946 ZSWIM6 zinc finger SWIM-type containing 6 2 4
MIRT505377 TMEM154 transmembrane protein 154 2 4
MIRT508778 GSG1 germ cell associated 1 2 2
MIRT509793 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT512421 LAYN layilin 2 4
MIRT513321 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT513592 DCTN6 dynactin subunit 6 2 2
MIRT514785 RBM4B RNA binding motif protein 4B 2 2
MIRT514859 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 2
MIRT515122 LMOD3 leiomodin 3 2 2
MIRT515271 CSNK1E casein kinase 1 epsilon 2 2
MIRT515594 FBXL13 F-box and leucine rich repeat protein 13 2 2
MIRT515880 PLXDC2 plexin domain containing 2 2 2
MIRT515908 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT515960 C9orf156 tRNA methyltransferase O 2 2
MIRT517210 OTUD6A OTU deubiquitinase 6A 2 2
MIRT517330 ZNF347 zinc finger protein 347 2 2
MIRT517480 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT517594 ZNF579 zinc finger protein 579 2 4
MIRT517676 TRIM72 tripartite motif containing 72 2 2
MIRT518215 TRMT10B tRNA methyltransferase 10B 2 2
MIRT518583 ATP8B1 ATPase phospholipid transporting 8B1 2 2
MIRT518777 ZFP14 ZFP14 zinc finger protein 2 2
MIRT519094 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 4
MIRT519112 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT519400 DNASE2 deoxyribonuclease 2, lysosomal 2 4
MIRT519446 GLA galactosidase alpha 2 2
MIRT519476 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT519711 ZNF584 zinc finger protein 584 2 4
MIRT521409 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT521522 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT522652 MANEAL mannosidase endo-alpha like 2 2
MIRT523505 GMPS guanine monophosphate synthase 2 4
MIRT523795 FAM63B MINDY lysine 48 deubiquitinase 2 2 2
MIRT524062 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524136 DMXL1 Dmx like 1 2 2
MIRT524192 DENND4C DENN domain containing 4C 2 4
MIRT525925 KIAA0391 KIAA0391 2 2
MIRT528021 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT528685 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT528769 CD1D CD1d molecule 2 2
MIRT529373 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 2 4
MIRT529469 ZNF546 zinc finger protein 546 2 2
MIRT529641 ZNF621 zinc finger protein 621 2 2
MIRT530681 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 4
MIRT530752 GPR82 G protein-coupled receptor 82 2 2
MIRT531628 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT531649 C19orf52 translocase of inner mitochondrial membrane 29 2 4
MIRT532179 SEC14L5 SEC14 like lipid binding 5 2 4
MIRT532219 CCDC117 coiled-coil domain containing 117 2 2
MIRT534238 SLC25A16 solute carrier family 25 member 16 2 4
MIRT539952 SLC30A5 solute carrier family 30 member 5 2 2
MIRT540179 MB21D1 Mab-21 domain containing 1 2 2
MIRT540466 ZNF71 zinc finger protein 71 2 2
MIRT540560 PPIC peptidylprolyl isomerase C 2 2
MIRT543265 ZNF662 zinc finger protein 662 2 2
MIRT543596 KIAA1549 KIAA1549 2 2
MIRT543971 RNF20 ring finger protein 20 2 2
MIRT544053 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT544605 DCAF5 DDB1 and CUL4 associated factor 5 2 2
MIRT544679 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT547627 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT550668 TRAF1 TNF receptor associated factor 1 2 2
MIRT551533 EMB embigin 2 2
MIRT552443 ZNF449 zinc finger protein 449 2 2
MIRT559265 BAG4 BCL2 associated athanogene 4 2 4
MIRT562479 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT564211 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT565973 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT570524 SHH sonic hedgehog 2 2
MIRT575307 Osbpl10 oxysterol binding protein-like 10 2 6
MIRT618212 C22orf39 chromosome 22 open reading frame 39 2 2
MIRT620115 HARBI1 harbinger transposase derived 1 2 2
MIRT624062 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT626083 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT629868 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630750 COG6 component of oligomeric golgi complex 6 2 2
MIRT631002 ZNF573 zinc finger protein 573 2 2
MIRT631100 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT631290 SGSM1 small G protein signaling modulator 1 2 2
MIRT631337 CD300E CD300e molecule 2 2
MIRT631532 MYO6 myosin VI 2 2
MIRT631644 WDR91 WD repeat domain 91 2 4
MIRT632788 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT633282 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT633593 ABRACL ABRA C-terminal like 2 2
MIRT634074 PLIN3 perilipin 3 2 2
MIRT634163 YME1L1 YME1 like 1 ATPase 2 2
MIRT634257 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634679 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT638384 RABL3 RAB, member of RAS oncogene family like 3 2 2
MIRT638687 GCLM glutamate-cysteine ligase modifier subunit 2 2
MIRT640311 PRR13 proline rich 13 2 2
MIRT641132 NPHP3 nephrocystin 3 2 2
MIRT642315 FPR1 formyl peptide receptor 1 2 2
MIRT643703 KIAA0586 KIAA0586 2 2
MIRT644322 NFKBID NFKB inhibitor delta 2 2
MIRT645741 POLR3A RNA polymerase III subunit A 2 2
MIRT646975 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 2
MIRT648064 TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 2 2
MIRT648536 CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 2 2
MIRT649294 NEK8 NIMA related kinase 8 2 2
MIRT650014 KLB klotho beta 2 2
MIRT650551 YIPF4 Yip1 domain family member 4 2 2
MIRT651796 UTP6 UTP6, small subunit processome component 2 2
MIRT652647 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT653548 SLC38A7 solute carrier family 38 member 7 2 2
MIRT653895 SGK3 serum/glucocorticoid regulated kinase family member 3 2 2
MIRT655470 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT657764 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT659118 DENND6A DENN domain containing 6A 2 2
MIRT659377 CREG2 cellular repressor of E1A stimulated genes 2 2 2
MIRT659836 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT659954 C8orf44-SGK3 C8orf44-SGK3 readthrough 2 2
MIRT660258 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT663268 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 2 2
MIRT663766 ZNF285 zinc finger protein 285 2 2
MIRT666198 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT669763 ZNF101 zinc finger protein 101 2 4
MIRT669933 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT670007 GPR156 G protein-coupled receptor 156 2 4
MIRT670465 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670868 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671313 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT671959 SPPL3 signal peptide peptidase like 3 2 2
MIRT672281 SHE Src homology 2 domain containing E 2 2
MIRT673654 CYCS cytochrome c, somatic 2 2
MIRT674063 ATXN3 ataxin 3 2 2
MIRT674423 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT674438 MIOX myo-inositol oxygenase 2 4
MIRT674483 BCL2L15 BCL2 like 15 2 2
MIRT675478 NUBPL nucleotide binding protein like 2 2
MIRT675648 TTPAL alpha tocopherol transfer protein like 2 2
MIRT675981 FAM126B family with sequence similarity 126 member B 2 2
MIRT676251 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT677652 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT682718 KIAA1456 KIAA1456 2 2
MIRT687545 MOB1B MOB kinase activator 1B 2 2
MIRT689620 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690035 CCDC90B coiled-coil domain containing 90B 2 2
MIRT691449 CXorf36 chromosome X open reading frame 36 2 2
MIRT691549 FLYWCH2 FLYWCH family member 2 2 2
MIRT691737 LARS leucyl-tRNA synthetase 2 2
MIRT692638 SUSD1 sushi domain containing 1 2 2
MIRT693866 IYD iodotyrosine deiodinase 2 2
MIRT693979 ZNF70 zinc finger protein 70 2 2
MIRT694150 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT695492 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT695547 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT696023 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT696402 CORO7 coronin 7 2 2
MIRT703028 HEATR5A HEAT repeat containing 5A 2 2
MIRT703559 FKBP14 FK506 binding protein 14 2 2
MIRT705036 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT705120 C4orf29 abhydrolase domain containing 18 2 2
MIRT706611 CYB5B cytochrome b5 type B 2 2
MIRT706635 PNPT1 polyribonucleotide nucleotidyltransferase 1 2 2
MIRT706730 RFK riboflavin kinase 2 2
MIRT706868 MAFF MAF bZIP transcription factor F 2 2
MIRT707020 RRP36 ribosomal RNA processing 36 2 2
MIRT707036 ACTR5 ARP5 actin related protein 5 homolog 2 2
MIRT707125 ZNF154 zinc finger protein 154 2 2
MIRT707390 SLC35F6 solute carrier family 35 member F6 2 2
MIRT708664 LYRM7 LYR motif containing 7 2 2
MIRT713010 BBX BBX, HMG-box containing 2 2
MIRT717314 TRAF3IP1 TRAF3 interacting protein 1 2 2
MIRT721912 C6orf201 chromosome 6 open reading frame 201 2 2
MIRT723050 YTHDC1 YTH domain containing 1 2 2
MIRT725038 NDUFAF7 NADH:ubiquinone oxidoreductase complex assembly factor 7 2 2
MIRT755316 SMAD5 SMAD family member 5 4 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4781-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4781-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4781-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-4781-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)

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