miRTarBase - #MIRT519191


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pre-miRNA Information
pre-miRNA hsa-mir-1208   
Genomic Coordinates chr8: 128150116 - 128150188
Synonyms MIRN1208, hsa-mir-1208, MIR1208
Description Homo sapiens miR-1208 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1208
Sequence 12| UCACUGUUCAGACAGGCGGA |31
Evidence Experimental
Experiments Northern
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs756433811 2 dbSNP
rs780440181 3 dbSNP
rs1380328961 4 dbSNP
rs747737307 8 dbSNP
rs771811651 10 dbSNP
rs1350004170 13 dbSNP
rs375652780 17 dbSNP
rs552306924 18 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol IVD   
Synonyms ACAD2
Description isovaleryl-CoA dehydrogenase
Transcript NM_002225   
Other Transcripts NM_001159508   
Expression
Putative miRNA Targets on IVD
3'UTR of IVD
(miRNA target sites are highlighted)		 
>IVD|NM_002225|3'UTR
   1 TCCTGAGACCCTTCGCCCCCTTTTCCTGCACCTAGTGGCCTTTCTTGGGAAGTAGAGATGTGGCGGCTTTCCCACCCTGC
  81 CCACAGCAGGCCCTCCTGCCCAGCTGCTCTTGTCAGCCCTCTGGCCTCTGGATGAGGTTGAGTTCTCCACAACAGCTCCC
 161 AAGCATCATGGGCCTCGCAGCCGGGCCTGTGCCACGGCTAGTGTTGTGTGATTTAAAATGGACTCAGCAGGAAGCATATT
 241 GTCTGGGGATTGTTGGGACAGGTTTTGGTGACTCTGTGCCCTTGCTCTCTAACTTCTGAGCCCACCTCCCAGGGTAGGCA
 321 CCTGGGGGCATGCAGGTGCCCACCTCCCAGGGTAGGCACCTGGGGGCATGCAGGTACCCACCTCTTTCTCTTGGGTGAGG
 401 CTCTGGCAAGGAGATCTCTCTGCTCAAGCACAGCAGAATCATGGCCCCTCTCCATGAATTGGAACTTGGTACAGGTTAAG
 481 TATCCCTAATCCTGAAATCTGAAACACTTGTGGTTCCAAGCATTTTGGATAAGGCAAATTCAACTTTCAGTCTCTTTTCT
 561 GGGGGAAAAAAATAATAAACCTAGCCTAGCCAGGCGTGGTGGCTCATGCTTGTAATCCCAGCACTTCAGGAGGCTGAGAT
 641 GGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGTGGAAACCTCGCCTCAACTAAAAATAGAAAAA
 721 AATTAGTTGGGCATGGTGGTGGGCACCTGTAATCCCAGCTACTTCAGGAGGCTGAGGCAGGAGAATTACTTGAACCCAGG
 801 AGGCGGACGTTGCAGTGAGCCGAGCTTGTGCCATTGCACTCCAGCCTGGGCGACAAGAGCAAAACTCTTCAAAAAACAAA
 881 ACAAAACAAAAAAACCCTGGCCCTTGTTTCTTCCAGTTTCTAGAGGTATCAGCTCCTAGCAGCTTATGAACACATATGCT
 961 TGCTTGGCCAGGCAAGGTGGTGTGTGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACTTGCAGTCAGG
1041 AGTTCAAGACCAGCCTGTCCAACGTGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGGGTGGTGGTGCAC
1121 GTCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGTGGAGGTTGCAATGAGCCAATA
1201 TGACACCGCTGCAGTCCAGCCTGGGCCATAGAGTGAGACTCTGTCTCAAAAAAGGAAAGAAAAATAGGCTGGGCACAGTG
1281 ACTCATGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCAGGTGGATCACGAGGTCAGGAGTTCAAGACCAGCCTGGCCA
1361 AGATGGTAAAACCTCGTCTCTACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCAGGCTCCTGTAATCCCAGCTACTCA
1441 GGAGGCTGAGGCAGAGAATTGCTTGAACCCGGGAGGCAGAGTTTGCAGTGAGCCAAGATCACACCACTGCACTCCAGCTT
1521 GGACGACAGAGCGAGACTCTGTCTCAAAAAATAATAGGCCAGGCATGGTGGCTCAACGTCTGTAATCCCAGCACTTTGGG
1601 AGGCCGAGGCGGGCAGATCACAAGGTCAGGAGTTCGAGACCAGCCTGACGACCAACATGGTGAAACCTCGTCTCTACTAA
1681 AAATACAAAAATTAGCCAGGCCTGGTGGCACGCGCCTGTAATCCCAGTTACACAGAAGACTGAGGCAGGAGAATCGCTTG
1761 AACGCAGGAGGCAGAGGTTGCAGGAGCTGAGATCGCGCCATTGCACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCTCA
1841 AAAAATAATAATAAAATAAATGAACACACATGCTGCTGAGTCCGCAGGGGGGGCAGAGCAGAGGACAGCGTGCTTTTGTG
1921 TACTGTTGGAAGACTGGCTCCTCCTGTACAGCACCTCTGAGCCCTTGTGCACCGCCCTGCCACGGGCACCATCCAGTCCT
2001 GGCCGTGTGACCACCCACAGCTGACTGGGCAGCAGGCACAGGCCCTACCCGAGCAGGCCGGAGTTGGCTCGCATGACTCC
2081 AGCTGAGGCTGCCTGTGTACATTTCTCCAGATACCCTATGGCTAATTTTGTTATAACTGCACAGTGGCTGCTGCCATTTT
2161 GTATTAAATATATTGTGAAACAAACCTATCTGGGGAGAAGCAATCTACTTGCCGCTGCTTCCTGTCTGGATCCAGCTTGT
2241 GTCCTTGGAGAGTGGCTGGCCCAGGTCCTATTCCTGTCCTCCAGCCCGTTCTTTCATGAGGGACAGGAAGGTAAAATCAG
2321 CCCTTAGGAGAGAGGTCTCAGCCTCCCTTTCCCAGATCTCCCAGTGAGTTTTAAAGGAAGCAGGGAGCCCAGAGTGCTAA
2401 GTTCTTACAGCCAGAAGGAAGCTTATAGATTTCTGAAAACCGCCCCTTTGTTTTTAAAAAGATCAACACAATTTGACTTT
2481 CTCAAGGTCAAAACGAACTAGAATCCAGATCTGCTCATGGCAAAAATGGGGGTGTTCTGAGAATTCCAGCTTTGGGCCGC
2561 ACTGTACAGCAGTCTGGATAGAGTGTGATCTGAGAAGGGAATGGGTCTGGGTTGTTCCACCCCTTCCGAGTTCCAAAAAG
2641 AGGGAACTGGTTTTCTTGGTTCTCAGCCCAGCAGCACCTATCCTGGCTCTTGGTCCTGGCCTGCAGCCAAGTGCTGTTCC
2721 TAGCCTGAGGCTTGAGACAGGTGGGGTTGGCTCCTCACCAACCCCAGTTCCGTCCCATCCTGAGGGCAAGATCCTGGGCT
2801 CATAGGCAGTCCCTTTCACTTCCTTGTCTTGCTCCCTGCTATGTTGGAGATGAATGTGACTAAAAGGGCCATCTTGCTGG
2881 CTTAATGTGTGGCTGGAGAGACCAGCCTGGAGACAATGTGGCAAAATGGGGCGCTTCATCCAGTCTGTCTAAGCCCTGTC
2961 GACTTGGGGAGGTGATTTCTTTCCTGGTTCTATATGTGAAGCAAAATAAATGTTTTAAAATTAAAAGCAAAAAAAACAAA
3041 ATGAACCATGAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aggCGGACAGACUUGU-CACu 5'
             ||||| |  |||| ||| 
Target 5' ccaGCCTGGC-CAACATGTGg 3'
 672 - 691 124.00 -15.70
2 
miRNA  3' aggcGGACA-----GACUUGUCACu 5'
              ::|||     ||| |||||| 
Target 5' taatTTTGTTATAACTGCACAGTGg 3'
 2123 - 2147 124.00 -12.90
3 
miRNA  3' agGCGGACAGAC---UUGUCACu 5'
            | || | |||   ||||| | 
Target 5' caCTCCAGCCTGGGCAACAGAGt 3'
 1804 - 1826 122.00 -15.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
203782 15 ClinVar
1186849 16 ClinVar
884362 113 ClinVar
315804 124 ClinVar
884363 132 ClinVar
315805 196 ClinVar
884364 197 ClinVar
315806 205 ClinVar
315807 262 ClinVar
886388 288 ClinVar
315808 290 ClinVar
315809 339 ClinVar
315810 385 ClinVar
315811 448 ClinVar
315812 567 ClinVar
886389 567 ClinVar
886390 569 ClinVar
315813 597 ClinVar
315814 612 ClinVar
887385 653 ClinVar
887386 700 ClinVar
887387 788 ClinVar
887388 799 ClinVar
887389 806 ClinVar
315815 809 ClinVar
315816 810 ClinVar
887576 823 ClinVar
887577 826 ClinVar
315817 1006 ClinVar
887578 1091 ClinVar
315818 1118 ClinVar
887579 1173 ClinVar
887580 1209 ClinVar
315819 1214 ClinVar
884430 1241 ClinVar
884431 1246 ClinVar
884432 1314 ClinVar
884433 1377 ClinVar
315820 1472 ClinVar
315821 1578 ClinVar
315822 1611 ClinVar
885362 1637 ClinVar
885363 1840 ClinVar
885364 1885 ClinVar
315823 1887 ClinVar
315824 1891 ClinVar
315825 1899 ClinVar
887454 1945 ClinVar
887455 1985 ClinVar
887456 2002 ClinVar
315826 2006 ClinVar
315827 2071 ClinVar
887457 2126 ClinVar
887458 2206 ClinVar
887459 2236 ClinVar
315828 2276 ClinVar
315829 2286 ClinVar
315830 2303 ClinVar
887640 2390 ClinVar
315831 2495 ClinVar
887641 2495 ClinVar
315832 2560 ClinVar
315833 2631 ClinVar
315834 2845 ClinVar
315835 2851 ClinVar
884494 2884 ClinVar
315836 2913 ClinVar
884495 2961 ClinVar
315837 3029 ClinVar
884496 3037 ClinVar
COSN31552972 16 COSMIC
COSN30466616 21 COSMIC
COSN31583732 21 COSMIC
COSN30488913 40 COSMIC
COSN31491990 52 COSMIC
COSN30116627 75 COSMIC
COSN30104227 94 COSMIC
COSN5173737 202 COSMIC
COSN29761055 339 COSMIC
COSN22169857 538 COSMIC
COSN28899620 823 COSMIC
COSN30611297 868 COSMIC
COSN2493380 968 COSMIC
COSN14799048 1050 COSMIC
COSN31959649 1194 COSMIC
COSN22725063 1272 COSMIC
COSN32148503 1529 COSMIC
COSN20111945 1894 COSMIC
COSN32064611 1942 COSMIC
COSN4761808 1944 COSMIC
COSN20078344 2074 COSMIC
COSN30699769 2118 COSMIC
COSN27499806 2328 COSMIC
COSN20989671 2356 COSMIC
COSN23462199 2490 COSMIC
COSN21226681 2886 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs938062574 1 dbSNP
rs1362173401 3 dbSNP
rs1328271998 10 dbSNP
rs1228507316 12 dbSNP
rs8040294 15 dbSNP
rs112765023 16 dbSNP
rs369667477 19 dbSNP
rs1337301959 20 dbSNP
rs1236906106 21 dbSNP
rs1046712881 24 dbSNP
rs769056725 26 dbSNP
rs369472717 28 dbSNP
rs886745848 36 dbSNP
rs776987475 37 dbSNP
rs1193504300 39 dbSNP
rs748298627 45 dbSNP
rs1447458131 53 dbSNP
rs1413311040 54 dbSNP
rs1042535765 62 dbSNP
rs1041153557 63 dbSNP
rs538799297 65 dbSNP
rs751207255 97 dbSNP
rs558721558 113 dbSNP
rs998548934 118 dbSNP
rs577706202 120 dbSNP
rs536728525 124 dbSNP
rs1262957898 131 dbSNP
rs190115786 132 dbSNP
rs1007187503 137 dbSNP
rs1243581689 139 dbSNP
rs893381174 143 dbSNP
rs1017696872 146 dbSNP
rs1445987336 151 dbSNP
rs1371046324 167 dbSNP
rs868854678 177 dbSNP
rs995182252 178 dbSNP
rs1026134981 183 dbSNP
rs1165169561 184 dbSNP
rs573527656 185 dbSNP
rs1426715791 187 dbSNP
rs1386263707 195 dbSNP
rs77680513 196 dbSNP
rs1417892978 197 dbSNP
rs886051127 205 dbSNP
rs1035727345 207 dbSNP
rs982187608 208 dbSNP
rs927993866 211 dbSNP
rs553261385 231 dbSNP
rs1267469376 234 dbSNP
rs1219811210 235 dbSNP
rs35599751 245 dbSNP
rs2075624 262 dbSNP
rs1381577384 275 dbSNP
rs545271626 278 dbSNP
rs919787120 282 dbSNP
rs147206510 285 dbSNP
rs565064447 288 dbSNP
rs529793013 290 dbSNP
rs886051128 290 dbSNP
rs1367004776 297 dbSNP
rs368025013 300 dbSNP
rs1407027048 302 dbSNP
rs1292863935 303 dbSNP
rs1366391939 305 dbSNP
rs1158473430 307 dbSNP
rs908457843 314 dbSNP
rs915244347 318 dbSNP
rs1333150309 328 dbSNP
rs1160470699 332 dbSNP
rs1230555076 334 dbSNP
rs946970104 336 dbSNP
rs531068507 337 dbSNP
rs978341502 338 dbSNP
rs879231133 339 dbSNP
rs1269132241 348 dbSNP
rs1261661599 349 dbSNP
rs1484768695 355 dbSNP
rs1262203173 361 dbSNP
rs934200186 366 dbSNP
rs1401321763 367 dbSNP
rs1203867977 368 dbSNP
rs1281498677 372 dbSNP
rs1225402292 377 dbSNP
rs1051208889 380 dbSNP
rs1040755317 381 dbSNP
rs899565746 383 dbSNP
rs145781896 385 dbSNP
rs886051129 385 dbSNP
rs527849281 391 dbSNP
rs890169843 402 dbSNP
rs943126292 404 dbSNP
rs1289765269 414 dbSNP
rs1188253362 415 dbSNP
rs181075595 416 dbSNP
rs1466009249 417 dbSNP
rs1427781066 424 dbSNP
rs1416639726 426 dbSNP
rs1481126421 432 dbSNP
rs1474014872 445 dbSNP
rs1038674505 447 dbSNP
rs79191320 448 dbSNP
rs1263614232 451 dbSNP
rs186293612 456 dbSNP
rs774581954 458 dbSNP
rs1453033505 460 dbSNP
rs1011750847 462 dbSNP
rs1460851244 468 dbSNP
rs1156698359 470 dbSNP
rs546900720 475 dbSNP
rs1205723608 481 dbSNP
rs566868717 484 dbSNP
rs1020923846 489 dbSNP
rs994753674 497 dbSNP
rs1269605743 498 dbSNP
rs1026271909 501 dbSNP
rs1312508850 509 dbSNP
rs903466337 512 dbSNP
rs746020585 513 dbSNP
rs1296797392 520 dbSNP
rs532655934 522 dbSNP
rs1404616959 523 dbSNP
rs1003342073 528 dbSNP
rs552386119 541 dbSNP
rs1339269010 554 dbSNP
rs1034862211 565 dbSNP
rs1308206796 566 dbSNP
rs549510775 567 dbSNP
rs1237552427 571 dbSNP
rs765034368 581 dbSNP
rs991503850 584 dbSNP
rs991334981 586 dbSNP
rs1022281888 592 dbSNP
rs149755898 595 dbSNP
rs1349421929 596 dbSNP
rs115034694 597 dbSNP
rs556745416 599 dbSNP
rs1461671390 600 dbSNP
rs1272415237 601 dbSNP
rs1194122543 603 dbSNP
rs1272939729 609 dbSNP
rs886051130 612 dbSNP
rs986902294 628 dbSNP
rs911399401 630 dbSNP
rs567262030 631 dbSNP
rs1484509223 648 dbSNP
rs761306144 653 dbSNP
rs1454008009 654 dbSNP
rs1251006797 657 dbSNP
rs908452408 658 dbSNP
rs191997379 659 dbSNP
rs943991849 663 dbSNP
rs1398267919 670 dbSNP
rs202127632 686 dbSNP
rs1423541420 693 dbSNP
rs920901317 695 dbSNP
rs1165191939 699 dbSNP
rs1039225701 700 dbSNP
rs932322773 701 dbSNP
rs1435242820 708 dbSNP
rs1053491726 716 dbSNP
rs1251257862 732 dbSNP
rs1234820453 735 dbSNP
rs1173162167 740 dbSNP
rs1357492366 754 dbSNP
rs898825797 763 dbSNP
rs930338292 771 dbSNP
rs1047433456 775 dbSNP
rs1350658433 787 dbSNP
rs1278287842 799 dbSNP
rs886325284 801 dbSNP
rs868156313 805 dbSNP
rs183425220 806 dbSNP
rs2075625 809 dbSNP
rs886051131 810 dbSNP
rs545308440 813 dbSNP
rs558747313 822 dbSNP
rs373923824 823 dbSNP
rs7182052 826 dbSNP
rs968162419 831 dbSNP
rs544709780 838 dbSNP
rs978029489 839 dbSNP
rs1234162773 848 dbSNP
rs1198738718 853 dbSNP
rs894459187 854 dbSNP
rs1279053581 855 dbSNP
rs1345058743 856 dbSNP
rs1487575020 869 dbSNP
rs1193057986 873 dbSNP
rs1030974159 886 dbSNP
rs955598445 887 dbSNP
rs1026993277 888 dbSNP
rs1252376104 888 dbSNP
rs762571908 892 dbSNP
rs1395618049 893 dbSNP
rs1225995889 894 dbSNP
rs1351972373 896 dbSNP
rs1434099709 899 dbSNP
rs952861468 903 dbSNP
rs1300999634 909 dbSNP
rs1387299112 910 dbSNP
rs1222349471 913 dbSNP
rs1343319584 914 dbSNP
rs1382820684 917 dbSNP
rs1317947002 919 dbSNP
rs773789235 923 dbSNP
rs189226861 926 dbSNP
rs911383651 927 dbSNP
rs763325446 929 dbSNP
rs1015456160 936 dbSNP
rs1402408471 939 dbSNP
rs965599674 940 dbSNP
rs1232802306 949 dbSNP
rs575183667 951 dbSNP
rs1352255420 954 dbSNP
rs1399773445 954 dbSNP
rs765927012 955 dbSNP
rs1431453061 956 dbSNP
rs751258245 958 dbSNP
rs1463218914 964 dbSNP
rs1195107751 969 dbSNP
rs1240746227 971 dbSNP
rs1253457606 972 dbSNP
rs530129218 973 dbSNP
rs540269821 975 dbSNP
rs1173919350 985 dbSNP
rs35694358 995 dbSNP
rs538291553 999 dbSNP
rs1263045468 1003 dbSNP
rs1320810493 1006 dbSNP
rs560096869 1006 dbSNP
rs759105597 1009 dbSNP
rs1284586545 1011 dbSNP
rs767403377 1012 dbSNP
rs914975387 1015 dbSNP
rs1056818440 1019 dbSNP
rs1268242192 1024 dbSNP
rs894976526 1025 dbSNP
rs1395647231 1030 dbSNP
rs1440851442 1034 dbSNP
rs1301834027 1035 dbSNP
rs1365922682 1039 dbSNP
rs1336004818 1047 dbSNP
rs1468113691 1049 dbSNP
rs1364888020 1051 dbSNP
rs1176825262 1058 dbSNP
rs1215759420 1059 dbSNP
rs1409646299 1063 dbSNP
rs1295653114 1064 dbSNP
rs752411713 1065 dbSNP
rs1196329138 1067 dbSNP
rs1042267037 1068 dbSNP
rs1274865409 1070 dbSNP
rs1468712260 1076 dbSNP
rs1213022561 1078 dbSNP
rs924776758 1080 dbSNP
rs1182306520 1085 dbSNP
rs1476439518 1087 dbSNP
rs1257277262 1091 dbSNP
rs938868507 1104 dbSNP
rs1306612041 1105 dbSNP
rs1270432281 1113 dbSNP
rs1187254678 1115 dbSNP
rs28532413 1116 dbSNP
rs886051132 1118 dbSNP
rs1012453870 1121 dbSNP
rs1043574370 1122 dbSNP
rs1303544356 1123 dbSNP
rs756115845 1136 dbSNP
rs1167309089 1142 dbSNP
rs1167661720 1147 dbSNP
rs1379039491 1149 dbSNP
rs1434929195 1150 dbSNP
rs1419076048 1155 dbSNP
rs1176895965 1158 dbSNP
rs1377213516 1160 dbSNP
rs1461193738 1163 dbSNP
rs1324489696 1164 dbSNP
rs1047821716 1172 dbSNP
rs532691940 1173 dbSNP
rs999583930 1174 dbSNP
rs1030943159 1179 dbSNP
rs1288980134 1180 dbSNP
rs1360630062 1181 dbSNP
rs1216433254 1188 dbSNP
rs955405069 1191 dbSNP
rs552425184 1193 dbSNP
rs1335238117 1199 dbSNP
rs1480027140 1200 dbSNP
rs1008429037 1208 dbSNP
rs7165233 1209 dbSNP
rs886051133 1214 dbSNP
rs1342385238 1220 dbSNP
rs146819701 1241 dbSNP
rs974616361 1246 dbSNP
rs1016111733 1248 dbSNP
rs965201472 1248 dbSNP
rs1223080322 1269 dbSNP
rs757344224 1270 dbSNP
rs951756030 1281 dbSNP
rs1333684090 1282 dbSNP
rs763997470 1283 dbSNP
rs983227663 1297 dbSNP
rs1241620522 1305 dbSNP
rs1299915860 1313 dbSNP
rs550652153 1314 dbSNP
rs939037198 1315 dbSNP
rs1056134764 1316 dbSNP
rs1426934753 1316 dbSNP
rs1258423246 1321 dbSNP
rs1474997986 1324 dbSNP
rs916448945 1330 dbSNP
rs554514443 1331 dbSNP
rs948011125 1332 dbSNP
rs1159033023 1334 dbSNP
rs1417797261 1340 dbSNP
rs1410574747 1342 dbSNP
rs1405200649 1345 dbSNP
rs1401843748 1346 dbSNP
rs1183668146 1355 dbSNP
rs567297452 1356 dbSNP
rs1344121157 1357 dbSNP
rs1397513956 1358 dbSNP
rs1317270495 1363 dbSNP
rs1267715083 1365 dbSNP
rs953980961 1366 dbSNP
rs1314344848 1368 dbSNP
rs1404076006 1368 dbSNP
rs1384094177 1369 dbSNP
rs1355760314 1373 dbSNP
rs903720810 1376 dbSNP
rs536344215 1377 dbSNP
rs1290340978 1381 dbSNP
rs1352516206 1389 dbSNP
rs778897908 1392 dbSNP
rs1224302815 1393 dbSNP
rs553038573 1400 dbSNP
rs1281612639 1402 dbSNP
rs1283392950 1408 dbSNP
rs1391927278 1408 dbSNP
rs1288610525 1411 dbSNP
rs1452303431 1412 dbSNP
rs1347442070 1413 dbSNP
rs1351619603 1414 dbSNP
rs1213190292 1418 dbSNP
rs1341884037 1419 dbSNP
rs1258314709 1421 dbSNP
rs891126253 1422 dbSNP
rs1434496105 1429 dbSNP
rs1008609013 1432 dbSNP
rs1018286505 1436 dbSNP
rs977846280 1438 dbSNP
rs1484883184 1441 dbSNP
rs1470692532 1454 dbSNP
rs1269931950 1457 dbSNP
rs1177138813 1461 dbSNP
rs1406348635 1462 dbSNP
rs140465296 1470 dbSNP
rs1175046294 1471 dbSNP
rs4923865 1472 dbSNP
rs1261279593 1474 dbSNP
rs1235734163 1478 dbSNP
rs1027552740 1487 dbSNP
rs951557896 1490 dbSNP
rs1057266249 1491 dbSNP
rs1380872372 1492 dbSNP
rs190880106 1498 dbSNP
rs1014641699 1501 dbSNP
rs960451975 1506 dbSNP
rs1469685170 1511 dbSNP
rs1404751364 1512 dbSNP
rs1173583316 1513 dbSNP
rs992205941 1516 dbSNP
rs916266994 1523 dbSNP
rs947948590 1524 dbSNP
rs1442596810 1525 dbSNP
rs1192280769 1526 dbSNP
rs1278728241 1532 dbSNP
rs979403600 1533 dbSNP
rs575407919 1534 dbSNP
rs940016794 1537 dbSNP
rs1281185434 1538 dbSNP
rs1347177668 1540 dbSNP
rs1460782914 1540 dbSNP
rs1241399585 1546 dbSNP
rs1037082726 1548 dbSNP
rs901285165 1555 dbSNP
rs998014020 1560 dbSNP
rs1028185714 1566 dbSNP
rs1275297754 1574 dbSNP
rs11630850 1578 dbSNP
rs1204336449 1579 dbSNP
rs554738498 1606 dbSNP
rs1402556747 1607 dbSNP
rs386783339 1608 dbSNP
rs560208226 1609 dbSNP
rs11630878 1611 dbSNP
rs1168955368 1612 dbSNP
rs1443984123 1619 dbSNP
rs1395193595 1622 dbSNP
rs966364545 1628 dbSNP
rs560135738 1637 dbSNP
rs769091155 1642 dbSNP
rs1194315767 1645 dbSNP
rs1484137355 1647 dbSNP
rs1040090234 1650 dbSNP
rs368774522 1651 dbSNP
rs960483400 1654 dbSNP
rs992942999 1659 dbSNP
rs1286468934 1663 dbSNP
rs899859183 1668 dbSNP
rs1447297530 1669 dbSNP
rs996152124 1670 dbSNP
rs1170464283 1671 dbSNP
rs1027278071 1673 dbSNP
rs1327553239 1675 dbSNP
rs887359063 1692 dbSNP
rs1004350094 1694 dbSNP
rs576791662 1698 dbSNP
rs1398260500 1702 dbSNP
rs546483981 1706 dbSNP
rs1308466109 1707 dbSNP
rs777287799 1712 dbSNP
rs573007850 1713 dbSNP
rs762339649 1714 dbSNP
rs1164944169 1715 dbSNP
rs562991820 1717 dbSNP
rs984349552 1721 dbSNP
rs960760855 1730 dbSNP
rs1179715037 1734 dbSNP
rs770627132 1737 dbSNP
rs1252797185 1741 dbSNP
rs1443037028 1750 dbSNP
rs1304012315 1753 dbSNP
rs1370340473 1755 dbSNP
rs1231083904 1756 dbSNP
rs867509911 1757 dbSNP
rs1350549401 1764 dbSNP
rs1340400449 1772 dbSNP
rs1195412190 1781 dbSNP
rs1023734352 1790 dbSNP
rs910132295 1792 dbSNP
rs1288591625 1793 dbSNP
rs1403890291 1795 dbSNP
rs182320281 1796 dbSNP
rs979759127 1797 dbSNP
rs552452829 1798 dbSNP
rs751478864 1798 dbSNP
rs925240293 1798 dbSNP
rs1157109868 1802 dbSNP
rs1458884453 1805 dbSNP
rs1412717781 1813 dbSNP
rs1198988015 1818 dbSNP
rs935239374 1823 dbSNP
rs1248857026 1831 dbSNP
rs1479552868 1831 dbSNP
rs1199996527 1832 dbSNP
rs1446987045 1834 dbSNP
rs186670312 1840 dbSNP
rs912374307 1841 dbSNP
rs1330620777 1843 dbSNP
rs1252857737 1844 dbSNP
rs1268151040 1855 dbSNP
rs756453656 1861 dbSNP
rs901237028 1864 dbSNP
rs944136288 1874 dbSNP
rs562252152 1884 dbSNP
rs1325854341 1885 dbSNP
rs1374266316 1886 dbSNP
rs1175754360 1887 dbSNP
rs1259692630 1887 dbSNP
rs1458699707 1887 dbSNP
rs398026948 1887 dbSNP
rs529843170 1889 dbSNP
rs546693286 1890 dbSNP
rs12185076 1891 dbSNP
rs887386650 1892 dbSNP
rs1004450033 1893 dbSNP
rs1280291846 1898 dbSNP
rs886051134 1899 dbSNP
rs1462756619 1900 dbSNP
rs1023343008 1906 dbSNP
rs1326511413 1906 dbSNP
rs1338525547 1910 dbSNP
rs1437231986 1915 dbSNP
rs1365807075 1925 dbSNP
rs1035878435 1927 dbSNP
rs895956080 1929 dbSNP
rs1385001701 1935 dbSNP
rs1320413094 1938 dbSNP
rs1013759724 1941 dbSNP
rs910131258 1945 dbSNP
rs1450694462 1947 dbSNP
rs1227009715 1948 dbSNP
rs1180844485 1950 dbSNP
rs1481992650 1950 dbSNP
rs1276467525 1953 dbSNP
rs1238648116 1957 dbSNP
rs538600078 1958 dbSNP
rs1444789428 1959 dbSNP
rs1482502668 1961 dbSNP
rs1337424887 1963 dbSNP
rs940287082 1964 dbSNP
rs972747816 1974 dbSNP
rs773719683 1975 dbSNP
rs1314295508 1978 dbSNP
rs1272943862 1983 dbSNP
rs969539454 1985 dbSNP
rs1238041383 1989 dbSNP
rs1441803348 1994 dbSNP
rs759281192 1996 dbSNP
rs1310302971 1997 dbSNP
rs185013442 2002 dbSNP
rs767044366 2005 dbSNP
rs886051135 2006 dbSNP
rs933999504 2007 dbSNP
rs752352907 2021 dbSNP
rs1181906163 2024 dbSNP
rs1472090373 2033 dbSNP
rs1249153955 2050 dbSNP
rs1206770743 2051 dbSNP
rs987991835 2057 dbSNP
rs77460541 2060 dbSNP
rs1260514272 2061 dbSNP
rs187887699 2071 dbSNP
rs193199905 2072 dbSNP
rs975650681 2074 dbSNP
rs1223281323 2077 dbSNP
rs921393862 2078 dbSNP
rs1043991887 2082 dbSNP
rs902410263 2083 dbSNP
rs931376335 2093 dbSNP
rs138876234 2096 dbSNP
rs999820176 2102 dbSNP
rs1160186284 2108 dbSNP
rs1459938175 2113 dbSNP
rs1056328692 2115 dbSNP
rs1399420428 2119 dbSNP
rs1456249360 2122 dbSNP
rs1048450160 2126 dbSNP
rs1183922460 2138 dbSNP
rs1357677453 2140 dbSNP
rs763819958 2144 dbSNP
rs776320823 2154 dbSNP
rs1023331567 2167 dbSNP
rs951836929 2170 dbSNP
rs1207959516 2182 dbSNP
rs534043098 2189 dbSNP
rs753780323 2192 dbSNP
rs757183267 2196 dbSNP
rs940268146 2198 dbSNP
rs1017546291 2204 dbSNP
rs185128282 2206 dbSNP
rs576829077 2214 dbSNP
rs545923231 2215 dbSNP
rs1385842764 2217 dbSNP
rs922853322 2219 dbSNP
rs750451493 2225 dbSNP
rs1457488831 2228 dbSNP
rs904968458 2231 dbSNP
rs189359145 2236 dbSNP
rs1434692410 2247 dbSNP
rs1031983762 2258 dbSNP
rs946814832 2260 dbSNP
rs1002778147 2261 dbSNP
rs956342089 2263 dbSNP
rs1033937484 2264 dbSNP
rs28452269 2265 dbSNP
rs958497940 2267 dbSNP
rs1187879171 2269 dbSNP
rs1463460050 2272 dbSNP
rs11790 2276 dbSNP
rs372973889 2277 dbSNP
rs542488129 2285 dbSNP
rs114657778 2286 dbSNP
rs1235613107 2288 dbSNP
rs527854996 2288 dbSNP
rs965667442 2289 dbSNP
rs886051136 2303 dbSNP
rs975301922 2307 dbSNP
rs1322039638 2311 dbSNP
rs1435180502 2324 dbSNP
rs921079375 2329 dbSNP
rs952790971 2330 dbSNP
rs984176136 2337 dbSNP
rs780172576 2341 dbSNP
rs939963676 2354 dbSNP
rs181729371 2356 dbSNP
rs917541061 2359 dbSNP
rs1393439893 2361 dbSNP
rs1006357556 2362 dbSNP
rs574682014 2378 dbSNP
rs747193406 2382 dbSNP
rs1308139002 2383 dbSNP
rs1376895371 2385 dbSNP
rs1476246500 2388 dbSNP
rs1238570712 2390 dbSNP
rs1189373618 2395 dbSNP
rs1441926228 2397 dbSNP
rs1306517461 2402 dbSNP
rs1202427014 2403 dbSNP
rs1349357049 2407 dbSNP
rs1211163972 2409 dbSNP
rs1014697474 2417 dbSNP
rs1345019884 2427 dbSNP
rs961805800 2432 dbSNP
rs1482064602 2442 dbSNP
rs1044590170 2443 dbSNP
rs560244242 2462 dbSNP
rs1250936350 2473 dbSNP
rs1375657728 2478 dbSNP
rs1307250414 2482 dbSNP
rs1439065661 2485 dbSNP
rs1000581551 2486 dbSNP
rs769144225 2489 dbSNP
rs1472401732 2490 dbSNP
rs781683880 2495 dbSNP
rs1009223424 2500 dbSNP
rs1019686189 2506 dbSNP
rs1424673009 2508 dbSNP
rs1251354830 2509 dbSNP
rs901113135 2510 dbSNP
rs1175638909 2511 dbSNP
rs997144406 2515 dbSNP
rs1463715642 2521 dbSNP
rs985440857 2524 dbSNP
rs1299136892 2533 dbSNP
rs1263224583 2534 dbSNP
rs1028170178 2535 dbSNP
rs1246338789 2537 dbSNP
rs1355776211 2550 dbSNP
rs952489470 2559 dbSNP
rs532233403 2560 dbSNP
rs984206384 2563 dbSNP
rs1404741714 2573 dbSNP
rs1328436599 2584 dbSNP
rs1015725276 2591 dbSNP
rs961444881 2598 dbSNP
rs1219365848 2602 dbSNP
rs1462035620 2602 dbSNP
rs1180321419 2605 dbSNP
rs1473673659 2616 dbSNP
rs539042633 2620 dbSNP
rs368709470 2624 dbSNP
rs1310119563 2628 dbSNP
rs1292643042 2629 dbSNP
rs28654574 2631 dbSNP
rs949014921 2638 dbSNP
rs1251699788 2639 dbSNP
rs1266890747 2639 dbSNP
rs1226229728 2642 dbSNP
rs980729981 2649 dbSNP
rs991990761 2651 dbSNP
rs1329070059 2662 dbSNP
rs531526442 2671 dbSNP
rs926128171 2676 dbSNP
rs936213468 2681 dbSNP
rs1388039499 2683 dbSNP
rs1468434819 2687 dbSNP
rs1156998179 2694 dbSNP
rs1459068145 2697 dbSNP
rs1053209879 2706 dbSNP
rs1196675079 2717 dbSNP
rs1172429643 2721 dbSNP
rs1477249217 2731 dbSNP
rs1254746791 2737 dbSNP
rs917813274 2739 dbSNP
rs913879765 2748 dbSNP
rs892245482 2752 dbSNP
rs770401939 2755 dbSNP
rs945110932 2760 dbSNP
rs1246930353 2763 dbSNP
rs1206265409 2764 dbSNP
rs1466027396 2768 dbSNP
rs1040734501 2771 dbSNP
rs900806120 2772 dbSNP
rs548430607 2773 dbSNP
rs941709659 2775 dbSNP
rs1234982251 2780 dbSNP
rs1364344708 2800 dbSNP
rs1423394347 2808 dbSNP
rs1318690451 2811 dbSNP
rs1036488417 2812 dbSNP
rs1464338822 2813 dbSNP
rs1345798052 2815 dbSNP
rs1028618572 2820 dbSNP
rs1412939866 2842 dbSNP
rs1395936907 2843 dbSNP
rs567923322 2844 dbSNP
rs7207 2845 dbSNP
rs147367220 2851 dbSNP
rs1388850795 2855 dbSNP
rs545701904 2871 dbSNP
rs1383588146 2878 dbSNP
rs961475848 2883 dbSNP
rs181699798 2884 dbSNP
rs1278356467 2887 dbSNP
rs1440309250 2904 dbSNP
rs1280533074 2906 dbSNP
rs11557072 2913 dbSNP
rs1018530714 2917 dbSNP
rs1295324844 2917 dbSNP
rs1230450614 2918 dbSNP
rs1024319360 2922 dbSNP
rs1283638380 2927 dbSNP
rs970425910 2934 dbSNP
rs1313939322 2935 dbSNP
rs968419293 2936 dbSNP
rs775020440 2945 dbSNP
rs1369035932 2947 dbSNP
rs980125351 2948 dbSNP
rs1429587031 2954 dbSNP
rs979490368 2959 dbSNP
rs926243484 2961 dbSNP
rs1296009468 2962 dbSNP
rs1259175698 2966 dbSNP
rs936245878 2969 dbSNP
rs539908221 2970 dbSNP
rs1322300881 2974 dbSNP
rs556311379 2978 dbSNP
rs527894003 2980 dbSNP
rs1206583658 2981 dbSNP
rs1307979499 2990 dbSNP
rs1289312436 2991 dbSNP
rs1226673737 2993 dbSNP
rs1031500511 2994 dbSNP
rs956834579 3002 dbSNP
rs1409387688 3004 dbSNP
rs991938521 3004 dbSNP
rs917718418 3007 dbSNP
rs576357533 3011 dbSNP
rs1486866912 3022 dbSNP
rs1187343621 3023 dbSNP
rs1262812976 3028 dbSNP
rs1267649714 3029 dbSNP
rs1462989140 3029 dbSNP
rs5812161 3029 dbSNP
rs200465929 3030 dbSNP
rs1476961032 3032 dbSNP
rs1163542334 3034 dbSNP
rs909140097 3036 dbSNP
rs913379191 3037 dbSNP
rs77633443 3038 dbSNP
rs1249405552 3043 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 3712.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aggcggacagacuUGUCACu 5'
                       |||||| 
Target 5' -------------ACAGUGa 3'
 		1 - 7
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001159508 | 3UTR | CACAGUGACUCAUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_002225 | 3UTR | GCACAGUGACUCAUGCCUGUAAUCCCAACACUUUGGGAGGCCGAGGCAGGUGGAUCACGAGGUCAGGAGUUCAAGACCAGCCUGGCCAAGAUGGUAAAACCUCGUCUCUACUAAAAAUACAAAAAUUAGCCAGGUGUGGUGGCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_002225 | 3UTR | CACAGUGACUCAUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000249760.2 | 3UTR | ACAGUGACUCAUGCCUGUAAUCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.351 5.0e-2 0.258 1.2e-1 23 Click to see details
GSE28544 Breast cancer 0.285 8.9e-2 0.121 2.9e-1 24 Click to see details
GSE28260 Renal cortex and medulla -0.389 9.4e-2 -0.368 1.1e-1 13 Click to see details
GSE38226 Liver fibrosis -0.255 1.3e-1 -0.163 2.4e-1 21 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.228 1.4e-1 0.265 1.0e-1 25 Click to see details
GSE32688 Pancreatic cancer -0.151 2.0e-1 -0.126 2.5e-1 32 Click to see details
GSE26953 Aortic valvular endothelial cells -0.048 4.1e-1 0.000 5.0e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
55 hsa-miR-1208 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT076103 ADORA2B adenosine A2b receptor 2 2
MIRT447464 OSMR oncostatin M receptor 2 2
MIRT448145 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 2 2
MIRT463639 YY1 YY1 transcription factor 2 4
MIRT465065 TSR1 TSR1, ribosome maturation factor 2 2
MIRT468464 SET SET nuclear proto-oncogene 2 4
MIRT480171 CALM3 calmodulin 3 2 2
MIRT481495 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 2 8
MIRT484111 ABCD2 ATP binding cassette subfamily D member 2 2 4
MIRT499834 PCSK9 proprotein convertase subtilisin/kexin type 9 2 8
MIRT500261 ZNF788 zinc finger family member 788 2 6
MIRT500551 XBP1P1 X-box binding protein 1 pseudogene 1 2 8
MIRT502697 CSNK1G1 casein kinase 1 gamma 1 2 4
MIRT517786 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT519191 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT523114 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT527425 NRL neural retina leucine zipper 2 2
MIRT529509 IYD iodotyrosine deiodinase 2 2
MIRT533705 TMEM67 transmembrane protein 67 2 2
MIRT535694 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT536141 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT544878 ZNF543 zinc finger protein 543 2 4
MIRT551362 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT555949 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT561498 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT569681 AMACR alpha-methylacyl-CoA racemase 2 2
MIRT572518 KIAA0232 KIAA0232 2 2
MIRT572877 OPHN1 oligophrenin 1 2 2
MIRT572924 PRAMEF1 PRAME family member 1 2 2
MIRT607528 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT611076 ZNF621 zinc finger protein 621 2 2
MIRT613236 CCDC39 coiled-coil domain containing 39 2 2
MIRT616542 NFATC2 nuclear factor of activated T-cells 2 2 2
MIRT620010 CCDC137 coiled-coil domain containing 137 2 2
MIRT621491 STYK1 serine/threonine/tyrosine kinase 1 2 2
MIRT622379 SALL1 spalt like transcription factor 1 2 2
MIRT628226 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT636458 LRCH3 leucine rich repeats and calponin homology domain containing 3 2 2
MIRT636546 FAM126B family with sequence similarity 126 member B 2 2
MIRT637350 PIGP phosphatidylinositol glycan anchor biosynthesis class P 2 2
MIRT637604 ZNF554 zinc finger protein 554 2 2
MIRT637732 EXO5 exonuclease 5 2 2
MIRT638697 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT640634 ZIC4 Zic family member 4 2 2
MIRT641535 SNW1 SNW domain containing 1 2 2
MIRT648796 VPS8 VPS8, CORVET complex subunit 2 2
MIRT663060 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT666581 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT699206 FYN FYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT704875 CD164 CD164 molecule 2 2
MIRT706850 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT712941 CCBE1 collagen and calcium binding EGF domains 1 2 3
MIRT714653 FSTL1 follistatin like 1 2 2
MIRT722320 SH2D1A SH2 domain containing 1A 2 2
MIRT722535 EPRS glutamyl-prolyl-tRNA synthetase 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-1 Anthocyanin NULL 145858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Caffeic acid NULL 689043 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Ferulic acid NULL 445858 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Hesperidin NULL 10621 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-1 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-1 Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-1 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Quantitative real-time PCR myocardial differentiation of mouse ES cells 19521018 2009 down-regulated
miR-1 Sulfonyl-hydrazone-1 (SHZ) NULL NULL Quantitative real-time PCR Murine broblast-derived Induced pluripotent stem cells 21445862 2011 up-regulated
miR-1 Cocaine NULL 446220 Next-generation sequencing ventral striatum 21708909 2011 up-regulated
miR-1 Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 down-regualted
miR-1 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-1 Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 Palmitic acid approved 985 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
miR-1 17beta-estradiol (E2) approved 5757 Microarray MCF-7AKT breast cancer cells 19528081 2009 down-regulated
miR-1 Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-1 Hydrogen peroxide (H2O2) NULL 784 Quantitative real-time PCR Human umbilical vein endothelial cells 21527937 2011 down-regulated
miR-1 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-1 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miR-1 Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
miR-1 Arsenic trioxide approved 14888 Quantitative real-time PCR cardia 22889704 2012 up-regulated
miR-1 Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-1 Quinidine approved 441074 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 up-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR myocardial infarction (MI) rats 19775284 2009 down-regulated
miR-1 Tanshinone IIA NULL 164676 Quantitative real-time PCR post-infarction rat cardiomyocytes 21220930 2011 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-1 Dexamethasone approved 5743 Microarray adrenals and granulosa cells 24205079 2014 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 up-regulated
miR-1 Thiourea (TU) NULL 737139 Quantitative real-time PCR skeletal muscle and heart 22142802 2012 down-regulated
miR-1 Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1208 Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-1208 Sunitinib 5329102 NSC750690 approved sensitive High Renal Cell Cancer tissue
hsa-miR-1208 Cisplatin 5460033 NSC119875 approved sensitive Low Renal Cell Cancer cell line (Caki-1)
hsa-mir-1208 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-1208 Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-1208 Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-miR-1208 Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM17)
hsa-miR-1208 Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-1208 Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-1208 Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-1208 Cisplatin 5460033 NSC119875 approved sensitive cell line (RPMI2650)
hsa-miR-1208 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-1208 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-1208 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-1208 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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