pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CSTF1   
Synonyms CstF-50, CstFp50
Description cleavage stimulation factor subunit 1
Transcript NM_001033521   
Other Transcripts NM_001033522 , NM_001324   
Expression
Putative miRNA Targets on CSTF1
3'UTR of CSTF1
(miRNA target sites are highlighted)
>CSTF1|NM_001033521|3'UTR
   1 GCCACCCTCTCCGTAGGGTTCTTTCTCGAGGACTCTACCCTCCTCCCCCACGTCCTGTCTCAGCTGCAGTCGTAAGTCCG
  81 TGCACCATCCTTGACGTTTTGCTGCCACCTCTGTCCACATTCTTCTTGGATTTGTATAAAAGAATCTTTTTTTACCTTGA
 161 TGTAGAATCATGGTGGAAAAAGTTGGAAACACAGATCTGTGCAGTTCTACATTCACTGATTATTACAGTGTGATTTTCAT
 241 CGGTTTTGTAAGTACAGGACTTGCCGTTTCTTTTGATCTCTTGATTGAAGGAGGATAGGGCATTAAAGTGCTTTTGACAT
 321 GAGGAATTTTCATTTGGTTCTTCTGTCAACTTTCTTGCTTATTCTGCTGAACCCTCTGTGTATTTCCCTTCCAGGTATAT
 401 TTGAACAGATAAGCAGGCATGCAGCTCTGAGACTCCTGAGTTTTATGCCATTATCAAAAGCATTTTCAAGAATCCCTCAA
 481 TTCTATCCTGAAATGATGTTATTCTGATAATAAAGCTCAGATCTGCAACTTTATTGTTATATATTTTTCACTTCTGTAAA
 561 ATTAATGGCCAGTTTTTCCTGACAATTTATAGGAACAGTATCTTTCAACATACTCCCTACATTATCCTTCAATATCTGCA
 641 ATACTTGTCTTTAGTAACTGTATTTCTGGTAAGATTATGATTTCATGAGAAACAATTGAAAATATATCCGATCTAATTAA
 721 ATTAGGTCAGCCTGCTATTGCTCTCAGGTGTTGCCTGTCTTCACGAATGATTAGTATCGATTGACCTCTTTCTTAGGTG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguagAAGGAAGUCGGAg 5'
               ||   ||||||| 
Target 5' ttaaaTTAGGTCAGCCTg 3'
717 - 734 141.00 -9.10
2
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             |||||: ||| |:| 
Target 5' ggtTCTTCTGTCAACTTt 3'
336 - 353 115.00 -8.20
3
miRNA  3' gguaGAAGGA---AGUCGGag 5'
              | ||||   |||||:  
Target 5' cccaCGTCCTGTCTCAGCTgc 3'
47 - 67 114.00 -13.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM3693700 1 COSMIC
COSM4675234 1 COSMIC
COSN8868683 5 COSMIC
COSN31575936 13 COSMIC
COSN24307034 14 COSMIC
COSN30145924 14 COSMIC
COSN30532502 18 COSMIC
COSN26972139 53 COSMIC
COSN26972141 65 COSMIC
COSN26972140 73 COSMIC
COSN15665045 76 COSMIC
COSN30157292 102 COSMIC
COSN28866525 154 COSMIC
COSN31599966 243 COSMIC
COSN30280737 276 COSMIC
COSN26425442 668 COSMIC
COSN23211868 797 COSMIC
COSN22323576 820 COSMIC
COSN16283627 1006 COSMIC
COSN24931987 1051 COSMIC
COSN2509820 1296 COSMIC
COSN7061437 1603 COSMIC
COSN21457430 1630 COSMIC
COSN21527020 1743 COSMIC
COSN20623868 1791 COSMIC
COSN30300271 1962 COSMIC
COSN30031630 2024 COSMIC
COSN1250840 2204 COSMIC
COSN15605020 2523 COSMIC
COSN27231766 2597 COSMIC
COSN27304660 2597 COSMIC
COSN7098499 2635 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs759604263 2 dbSNP
rs767553332 5 dbSNP
rs546236855 7 dbSNP
rs1251434541 8 dbSNP
rs181401266 13 dbSNP
rs750199023 14 dbSNP
rs757046491 16 dbSNP
rs758269154 17 dbSNP
rs1257230490 19 dbSNP
rs779791984 21 dbSNP
rs780906370 22 dbSNP
rs751311711 24 dbSNP
rs538212301 28 dbSNP
rs201838541 29 dbSNP
rs372870703 30 dbSNP
rs185706466 31 dbSNP
rs1284643125 35 dbSNP
rs778284558 36 dbSNP
rs749587691 37 dbSNP
rs1332711693 43 dbSNP
rs771299882 46 dbSNP
rs149041179 49 dbSNP
rs375719269 50 dbSNP
rs760835133 52 dbSNP
rs6024853 53 dbSNP
rs542730432 54 dbSNP
rs143018521 56 dbSNP
rs1317650555 59 dbSNP
rs1316341908 64 dbSNP
rs1402481432 72 dbSNP
rs1409358190 73 dbSNP
rs749112247 80 dbSNP
rs938131571 81 dbSNP
rs1313533420 82 dbSNP
rs944412005 86 dbSNP
rs768650822 92 dbSNP
rs148184670 96 dbSNP
rs545396193 97 dbSNP
rs1261961780 99 dbSNP
rs900254779 102 dbSNP
rs773966690 103 dbSNP
rs1448159082 104 dbSNP
rs1348029294 114 dbSNP
rs1218564605 119 dbSNP
rs1321242770 120 dbSNP
rs996002472 120 dbSNP
rs1224406164 121 dbSNP
rs761638765 129 dbSNP
rs902740376 133 dbSNP
rs1268568346 135 dbSNP
rs1204215099 139 dbSNP
rs887639174 143 dbSNP
rs1345845474 145 dbSNP
rs1009500268 148 dbSNP
rs565582750 159 dbSNP
rs1201269543 165 dbSNP
rs1014882900 189 dbSNP
rs1477679001 189 dbSNP
rs900655799 191 dbSNP
rs995974759 192 dbSNP
rs1422482125 194 dbSNP
rs1184347988 199 dbSNP
rs1027357474 208 dbSNP
rs773481374 210 dbSNP
rs531073440 211 dbSNP
rs115138879 215 dbSNP
rs1004470910 217 dbSNP
rs190240313 218 dbSNP
rs1264882366 221 dbSNP
rs546045358 224 dbSNP
rs1317008620 226 dbSNP
rs981746716 229 dbSNP
rs1180212486 235 dbSNP
rs1271215922 237 dbSNP
rs1216542373 242 dbSNP
rs140219472 243 dbSNP
rs958775064 244 dbSNP
rs546273916 250 dbSNP
rs16979884 253 dbSNP
rs1450473655 262 dbSNP
rs538250906 266 dbSNP
rs182315222 267 dbSNP
rs1465447648 279 dbSNP
rs1033577887 287 dbSNP
rs867533925 294 dbSNP
rs1416213659 297 dbSNP
rs75407746 299 dbSNP
rs1042390502 301 dbSNP
rs1411267213 322 dbSNP
rs1405979536 328 dbSNP
rs989016548 333 dbSNP
rs765801662 338 dbSNP
rs923921154 343 dbSNP
rs1244907849 347 dbSNP
rs1184115379 354 dbSNP
rs1457203718 355 dbSNP
rs944339976 358 dbSNP
rs146945258 362 dbSNP
rs1308320852 365 dbSNP
rs1289382648 368 dbSNP
rs752969917 375 dbSNP
rs931703769 376 dbSNP
rs1048842161 377 dbSNP
rs887597949 377 dbSNP
rs554775062 387 dbSNP
rs7806 389 dbSNP
rs1346761225 398 dbSNP
rs533942892 400 dbSNP
rs996710027 407 dbSNP
rs1354757112 411 dbSNP
rs1048805628 413 dbSNP
rs1162470410 417 dbSNP
rs780974195 418 dbSNP
rs1458104017 420 dbSNP
rs1386551729 426 dbSNP
rs745582705 433 dbSNP
rs1418406786 435 dbSNP
rs1014234593 436 dbSNP
rs6092312 437 dbSNP
rs1436997340 445 dbSNP
rs1268468228 446 dbSNP
rs1220524113 447 dbSNP
rs1024714785 458 dbSNP
rs1247505572 461 dbSNP
rs905887209 463 dbSNP
rs1315686018 476 dbSNP
rs755831910 477 dbSNP
rs1309738751 480 dbSNP
rs779371347 481 dbSNP
rs6099131 489 dbSNP
rs1014566326 498 dbSNP
rs1002024153 499 dbSNP
rs1367329001 520 dbSNP
rs1302219759 524 dbSNP
rs1402682397 530 dbSNP
rs1033133448 533 dbSNP
rs1481575620 534 dbSNP
rs748850614 535 dbSNP
rs1303250602 536 dbSNP
rs13043522 538 dbSNP
rs1452377822 539 dbSNP
rs1362001862 541 dbSNP
rs1161131581 542 dbSNP
rs139284561 555 dbSNP
rs573328904 556 dbSNP
rs1428335072 563 dbSNP
rs1002825360 564 dbSNP
rs1428691377 566 dbSNP
rs1034675244 570 dbSNP
rs1269810555 574 dbSNP
rs1466554533 577 dbSNP
rs1170124671 585 dbSNP
rs1204663201 589 dbSNP
rs1020472957 594 dbSNP
rs771516386 597 dbSNP
rs966282200 598 dbSNP
rs976382963 600 dbSNP
rs921590280 606 dbSNP
rs1225677813 607 dbSNP
rs78996198 609 dbSNP
rs186054340 610 dbSNP
rs989955901 611 dbSNP
rs1332402609 614 dbSNP
rs1382128052 617 dbSNP
rs575940634 621 dbSNP
rs544557612 633 dbSNP
rs1282047961 634 dbSNP
rs1405147500 642 dbSNP
rs761037856 643 dbSNP
rs1174023910 645 dbSNP
rs143206308 648 dbSNP
rs978159646 650 dbSNP
rs530252437 655 dbSNP
rs924000183 658 dbSNP
rs940481388 687 dbSNP
rs1263903746 694 dbSNP
rs774397035 697 dbSNP
rs1036209670 705 dbSNP
rs1249517722 708 dbSNP
rs1461279400 708 dbSNP
rs896349336 709 dbSNP
rs117639398 710 dbSNP
rs976364761 711 dbSNP
rs1324648434 718 dbSNP
rs561071975 725 dbSNP
rs1210200194 735 dbSNP
rs1226236029 738 dbSNP
rs777151702 740 dbSNP
rs932164883 750 dbSNP
rs1297070862 751 dbSNP
rs1382251444 755 dbSNP
rs1381982364 763 dbSNP
rs1490883226 765 dbSNP
rs1049195578 766 dbSNP
rs1268508001 775 dbSNP
rs1470866479 778 dbSNP
rs887927504 779 dbSNP
rs564474792 780 dbSNP
rs1374950150 786 dbSNP
rs1444011765 787 dbSNP
rs893242944 787 dbSNP
rs532067117 789 dbSNP
rs760216162 799 dbSNP
rs1020389499 801 dbSNP
rs114324599 815 dbSNP
rs1337066404 819 dbSNP
rs568735929 820 dbSNP
rs147543356 821 dbSNP
rs1454480414 829 dbSNP
rs765704609 841 dbSNP
rs1422313980 842 dbSNP
rs1302125978 843 dbSNP
rs376796723 844 dbSNP
rs1340790343 845 dbSNP
rs1398909617 848 dbSNP
rs1168648479 853 dbSNP
rs1401308032 863 dbSNP
rs1383459764 883 dbSNP
rs1166065850 894 dbSNP
rs1301261444 895 dbSNP
rs1445746387 899 dbSNP
rs1292895281 901 dbSNP
rs1439856352 902 dbSNP
rs1252249853 914 dbSNP
rs1325726909 918 dbSNP
rs62209417 919 dbSNP
rs908933368 920 dbSNP
rs953121385 920 dbSNP
rs984490826 920 dbSNP
rs75370577 921 dbSNP
rs548201607 922 dbSNP
rs1266949537 934 dbSNP
rs1356976769 935 dbSNP
rs1337291405 939 dbSNP
rs1308939340 962 dbSNP
rs1404537746 967 dbSNP
rs894362005 974 dbSNP
rs1221518401 980 dbSNP
rs568319364 981 dbSNP
rs949282900 986 dbSNP
rs1206910299 987 dbSNP
rs1157284358 989 dbSNP
rs1471394910 991 dbSNP
rs1364705821 995 dbSNP
rs1327547761 1005 dbSNP
rs8125654 1006 dbSNP
rs1428397089 1010 dbSNP
rs569511474 1012 dbSNP
rs1451618102 1021 dbSNP
rs926564383 1024 dbSNP
rs1203313784 1026 dbSNP
rs1021498038 1027 dbSNP
rs1288728024 1038 dbSNP
rs1387689692 1045 dbSNP
rs200972527 1046 dbSNP
rs370302677 1046 dbSNP
rs762079207 1047 dbSNP
rs1285358809 1050 dbSNP
rs937316934 1055 dbSNP
rs1344674756 1058 dbSNP
rs373493200 1062 dbSNP
rs1316890575 1066 dbSNP
rs1163421127 1068 dbSNP
rs1360756919 1069 dbSNP
rs1176198165 1071 dbSNP
rs191006272 1076 dbSNP
rs1286546819 1077 dbSNP
rs1201115955 1078 dbSNP
rs1383660534 1080 dbSNP
rs1240985882 1081 dbSNP
rs1396152249 1083 dbSNP
rs142136389 1083 dbSNP
rs1165686412 1086 dbSNP
rs1177846150 1086 dbSNP
rs1182899648 1086 dbSNP
rs1210498127 1086 dbSNP
rs1244722109 1086 dbSNP
rs1268647896 1086 dbSNP
rs1317650302 1086 dbSNP
rs1408747706 1086 dbSNP
rs1414662876 1086 dbSNP
rs1418296520 1086 dbSNP
rs1450985797 1086 dbSNP
rs1459867099 1086 dbSNP
rs1476071258 1086 dbSNP
rs71198364 1086 dbSNP
rs754496445 1086 dbSNP
rs768901777 1086 dbSNP
rs1317033070 1088 dbSNP
rs1380572905 1089 dbSNP
rs1054401286 1098 dbSNP
rs1244952194 1106 dbSNP
rs1309730536 1111 dbSNP
rs1214607794 1112 dbSNP
rs6024854 1113 dbSNP
rs1241484559 1114 dbSNP
rs6024855 1115 dbSNP
rs967197953 1117 dbSNP
rs1201150747 1119 dbSNP
rs1245507818 1120 dbSNP
rs1460416732 1121 dbSNP
rs1213148613 1122 dbSNP
rs1183313991 1124 dbSNP
rs1385501728 1125 dbSNP
rs181404945 1127 dbSNP
rs887811596 1128 dbSNP
rs1441887697 1129 dbSNP
rs1430258731 1133 dbSNP
rs1420464831 1141 dbSNP
rs375639343 1151 dbSNP
rs1031466050 1152 dbSNP
rs1390251453 1152 dbSNP
rs1466097413 1162 dbSNP
rs1338196193 1164 dbSNP
rs1403737865 1169 dbSNP
rs1002167883 1170 dbSNP
rs539133492 1172 dbSNP
rs1451829168 1175 dbSNP
rs976460723 1181 dbSNP
rs922226672 1182 dbSNP
rs1206880066 1186 dbSNP
rs1010271848 1192 dbSNP
rs1041815934 1194 dbSNP
rs1243812356 1198 dbSNP
rs932260157 1200 dbSNP
rs1316623899 1202 dbSNP
rs1313985316 1207 dbSNP
rs185543416 1209 dbSNP
rs901984160 1215 dbSNP
rs909417952 1218 dbSNP
rs565960052 1219 dbSNP
rs1372328034 1220 dbSNP
rs1036113438 1221 dbSNP
rs1321953641 1225 dbSNP
rs906910593 1228 dbSNP
rs938381696 1229 dbSNP
rs1481804222 1230 dbSNP
rs190644186 1231 dbSNP
rs1405478646 1236 dbSNP
rs1184668783 1244 dbSNP
rs1249361475 1247 dbSNP
rs1268402545 1254 dbSNP
rs11700131 1255 dbSNP
rs1220360785 1256 dbSNP
rs1490845563 1259 dbSNP
rs1433421097 1262 dbSNP
rs544560640 1268 dbSNP
rs1426631365 1269 dbSNP
rs953667691 1270 dbSNP
rs1011535325 1271 dbSNP
rs1469183962 1273 dbSNP
rs1315550061 1291 dbSNP
rs1309581311 1294 dbSNP
rs182932972 1295 dbSNP
rs760833370 1297 dbSNP
rs1350732767 1301 dbSNP
rs903021479 1302 dbSNP
rs1369089049 1307 dbSNP
rs1439749137 1309 dbSNP
rs1015919955 1311 dbSNP
rs961746053 1321 dbSNP
rs1343309845 1333 dbSNP
rs998654698 1335 dbSNP
rs1457516854 1339 dbSNP
rs1428881300 1345 dbSNP
rs1031098846 1349 dbSNP
rs971800433 1349 dbSNP
rs970928978 1356 dbSNP
rs1186497419 1358 dbSNP
rs980649673 1362 dbSNP
rs1270503168 1365 dbSNP
rs926506060 1366 dbSNP
rs1323258388 1376 dbSNP
rs1262187736 1381 dbSNP
rs1372802287 1387 dbSNP
rs766649389 1391 dbSNP
rs1285231719 1392 dbSNP
rs997591293 1393 dbSNP
rs1381126039 1397 dbSNP
rs1029436132 1398 dbSNP
rs1343749371 1399 dbSNP
rs953370500 1400 dbSNP
rs1166713351 1402 dbSNP
rs1053667708 1408 dbSNP
rs985045599 1410 dbSNP
rs776536500 1420 dbSNP
rs962191266 1421 dbSNP
rs574752068 1425 dbSNP
rs1467756112 1428 dbSNP
rs1378376181 1429 dbSNP
rs901943966 1430 dbSNP
rs933454395 1433 dbSNP
rs1309839757 1435 dbSNP
rs928803694 1442 dbSNP
rs1461174494 1443 dbSNP
rs1415201508 1453 dbSNP
rs938461562 1457 dbSNP
rs1055542879 1458 dbSNP
rs1202489443 1460 dbSNP
rs1050602876 1462 dbSNP
rs1484046111 1462 dbSNP
rs541038999 1462 dbSNP
rs1339435129 1463 dbSNP
rs1251106296 1464 dbSNP
rs534851859 1469 dbSNP
rs10470034 1472 dbSNP
rs1266389163 1479 dbSNP
rs1334474699 1479 dbSNP
rs1397490219 1487 dbSNP
rs189120466 1502 dbSNP
rs1016560516 1503 dbSNP
rs897461858 1504 dbSNP
rs1193837415 1505 dbSNP
rs765636642 1510 dbSNP
rs993167666 1511 dbSNP
rs1408153614 1512 dbSNP
rs1043004426 1513 dbSNP
rs1169405930 1517 dbSNP
rs903074336 1520 dbSNP
rs998717990 1521 dbSNP
rs1443298276 1523 dbSNP
rs1256491794 1525 dbSNP
rs1194870272 1528 dbSNP
rs1041299095 1530 dbSNP
rs1276132183 1531 dbSNP
rs900993375 1541 dbSNP
rs149630806 1542 dbSNP
rs1404395453 1543 dbSNP
rs1270856018 1544 dbSNP
rs1340836201 1550 dbSNP
rs532102357 1554 dbSNP
rs1213357415 1556 dbSNP
rs57790792 1557 dbSNP
rs1360590198 1558 dbSNP
rs1225234231 1564 dbSNP
rs1308745593 1565 dbSNP
rs1424020182 1566 dbSNP
rs1364268681 1567 dbSNP
rs1006141951 1570 dbSNP
rs1016482270 1575 dbSNP
rs962295859 1576 dbSNP
rs763401814 1581 dbSNP
rs972331148 1583 dbSNP
rs1471420602 1584 dbSNP
rs928832336 1590 dbSNP
rs1243350705 1593 dbSNP
rs568559980 1598 dbSNP
rs960234588 1601 dbSNP
rs991650518 1602 dbSNP
rs946025404 1603 dbSNP
rs977404822 1605 dbSNP
rs562566138 1606 dbSNP
rs947049324 1610 dbSNP
rs933402112 1624 dbSNP
rs531232463 1625 dbSNP
rs924254973 1626 dbSNP
rs1289161153 1629 dbSNP
rs1404475342 1630 dbSNP
rs1326159260 1635 dbSNP
rs548125431 1636 dbSNP
rs1384815790 1641 dbSNP
rs1040958607 1642 dbSNP
rs1459094543 1650 dbSNP
rs901039840 1652 dbSNP
rs1182442748 1654 dbSNP
rs11905070 1654 dbSNP
rs1037919754 1656 dbSNP
rs898099090 1662 dbSNP
rs11905108 1669 dbSNP
rs796149665 1671 dbSNP
rs192078950 1672 dbSNP
rs1269085102 1675 dbSNP
rs8183916 1676 dbSNP
rs1223102189 1681 dbSNP
rs889168274 1683 dbSNP
rs6024856 1685 dbSNP
rs1016249651 1688 dbSNP
rs1437235854 1698 dbSNP
rs539170308 1702 dbSNP
rs989291129 1703 dbSNP
rs1020798524 1706 dbSNP
rs966586007 1708 dbSNP
rs558799067 1722 dbSNP
rs897819950 1723 dbSNP
rs183972217 1725 dbSNP
rs370644175 1726 dbSNP
rs111748077 1727 dbSNP
rs1478035394 1729 dbSNP
rs375097993 1730 dbSNP
rs1022740785 1746 dbSNP
rs968480252 1747 dbSNP
rs910630871 1748 dbSNP
rs1214508963 1750 dbSNP
rs879747580 1751 dbSNP
rs924305820 1752 dbSNP
rs757298599 1762 dbSNP
rs977076558 1763 dbSNP
rs1384408886 1765 dbSNP
rs922508212 1769 dbSNP
rs1440945456 1770 dbSNP
rs932489040 1774 dbSNP
rs1280923966 1775 dbSNP
rs1049525875 1776 dbSNP
rs368399942 1777 dbSNP
rs888268481 1778 dbSNP
rs778904970 1779 dbSNP
rs1410487826 1783 dbSNP
rs1231225001 1791 dbSNP
rs1366490122 1791 dbSNP
rs1037751117 1792 dbSNP
rs1399017557 1794 dbSNP
rs1446187078 1795 dbSNP
rs753268091 1799 dbSNP
rs1335763791 1808 dbSNP
rs745423038 1811 dbSNP
rs191255529 1812 dbSNP
rs896047747 1818 dbSNP
rs184031054 1821 dbSNP
rs6024857 1824 dbSNP
rs1023166495 1831 dbSNP
rs968865390 1834 dbSNP
rs553978122 1838 dbSNP
rs1471657202 1839 dbSNP
rs906163485 1842 dbSNP
rs1382531870 1844 dbSNP
rs533326032 1845 dbSNP
rs115852666 1849 dbSNP
rs1280898250 1852 dbSNP
rs1348186837 1855 dbSNP
rs1222645555 1861 dbSNP
rs1314890024 1863 dbSNP
rs1031386248 1866 dbSNP
rs376126138 1869 dbSNP
rs1381793690 1879 dbSNP
rs976414049 1880 dbSNP
rs186842925 1882 dbSNP
rs1201709523 1888 dbSNP
rs932606841 1895 dbSNP
rs985337585 1896 dbSNP
rs1020725094 1902 dbSNP
rs1305676927 1903 dbSNP
rs116236411 1907 dbSNP
rs1371106012 1909 dbSNP
rs56269601 1910 dbSNP
rs1163978924 1919 dbSNP
rs1403434986 1926 dbSNP
rs1415664239 1927 dbSNP
rs1030001283 1931 dbSNP
rs1472402948 1936 dbSNP
rs576049608 1938 dbSNP
rs954695146 1940 dbSNP
rs748016927 1942 dbSNP
rs1483414727 1943 dbSNP
rs1291772717 1948 dbSNP
rs1183803435 1951 dbSNP
rs1219969089 1953 dbSNP
rs1323931755 1961 dbSNP
rs1291064453 1963 dbSNP
rs1223538761 1965 dbSNP
rs1349505140 1976 dbSNP
rs1286014700 1977 dbSNP
rs772013444 1986 dbSNP
rs777498713 1988 dbSNP
rs541503813 1991 dbSNP
rs1292915055 1993 dbSNP
rs986557099 2002 dbSNP
rs1351502620 2008 dbSNP
rs977204812 2023 dbSNP
rs1165221017 2030 dbSNP
rs1234804531 2032 dbSNP
rs1456454388 2034 dbSNP
rs941160598 2037 dbSNP
rs1468812561 2039 dbSNP
rs963445135 2044 dbSNP
rs746839901 2045 dbSNP
rs1430111758 2056 dbSNP
rs55853012 2064 dbSNP
rs185297883 2065 dbSNP
rs547699347 2068 dbSNP
rs1247736750 2070 dbSNP
rs895792704 2072 dbSNP
rs1410877809 2073 dbSNP
rs1331303620 2097 dbSNP
rs1327512101 2100 dbSNP
rs1046602833 2101 dbSNP
rs776957319 2103 dbSNP
rs1329358376 2104 dbSNP
rs1300023348 2109 dbSNP
rs542424714 2111 dbSNP
rs1283310334 2113 dbSNP
rs1055185310 2118 dbSNP
rs1294028443 2127 dbSNP
rs1434178145 2129 dbSNP
rs1346822087 2132 dbSNP
rs1322863952 2139 dbSNP
rs562095741 2146 dbSNP
rs1377244207 2148 dbSNP
rs775716359 2150 dbSNP
rs1262426792 2154 dbSNP
rs1010608694 2155 dbSNP
rs564339720 2156 dbSNP
rs1426560980 2159 dbSNP
rs1340054357 2160 dbSNP
rs533185336 2171 dbSNP
rs1463859612 2173 dbSNP
rs1042153413 2182 dbSNP
rs902321560 2184 dbSNP
rs1000331001 2200 dbSNP
rs549906113 2203 dbSNP
rs1230509994 2204 dbSNP
rs1313434960 2212 dbSNP
rs1301942357 2213 dbSNP
rs1270630709 2214 dbSNP
rs190147899 2217 dbSNP
rs569291765 2218 dbSNP
rs1181758865 2223 dbSNP
rs182315587 2230 dbSNP
rs1435461268 2231 dbSNP
rs1029365669 2244 dbSNP
rs1301307557 2251 dbSNP
rs953713407 2252 dbSNP
rs763495738 2253 dbSNP
rs1359785164 2266 dbSNP
rs1167982099 2268 dbSNP
rs548319412 2269 dbSNP
rs1197447884 2271 dbSNP
rs1017601282 2280 dbSNP
rs139356062 2286 dbSNP
rs533895703 2287 dbSNP
rs1476028139 2291 dbSNP
rs1255125463 2297 dbSNP
rs962531935 2302 dbSNP
rs554063545 2304 dbSNP
rs1483974762 2312 dbSNP
rs6099132 2318 dbSNP
rs1169964442 2325 dbSNP
rs543194663 2329 dbSNP
rs972516329 2334 dbSNP
rs1429564193 2336 dbSNP
rs918398852 2337 dbSNP
rs1299658407 2339 dbSNP
rs1227964595 2343 dbSNP
rs1339652334 2344 dbSNP
rs1303347485 2358 dbSNP
rs1310902517 2362 dbSNP
rs577078755 2363 dbSNP
rs185640670 2368 dbSNP
rs917294335 2370 dbSNP
rs948660585 2383 dbSNP
rs1427832954 2384 dbSNP
rs982699108 2386 dbSNP
rs1229561380 2390 dbSNP
rs556711384 2390 dbSNP
rs11475247 2391 dbSNP
rs1457754613 2391 dbSNP
rs398088523 2391 dbSNP
rs1268147902 2393 dbSNP
rs1425220756 2397 dbSNP
rs1257700238 2400 dbSNP
rs938243839 2400 dbSNP
rs1044675711 2401 dbSNP
rs904745558 2404 dbSNP
rs576106012 2406 dbSNP
rs1263484710 2407 dbSNP
rs751930869 2407 dbSNP
rs1490919633 2411 dbSNP
rs144086977 2425 dbSNP
rs1408149930 2426 dbSNP
rs997986630 2427 dbSNP
rs79827607 2433 dbSNP
rs35839613 2435 dbSNP
rs1266797433 2445 dbSNP
rs6014718 2451 dbSNP
rs765936258 2464 dbSNP
rs1371889472 2468 dbSNP
rs753594645 2475 dbSNP
rs1418197237 2476 dbSNP
rs1449238020 2482 dbSNP
rs572088409 2489 dbSNP
rs1157957515 2495 dbSNP
rs1164676883 2498 dbSNP
rs1006485666 2499 dbSNP
rs1016826273 2508 dbSNP
rs1181846564 2508 dbSNP
rs962625738 2509 dbSNP
rs541000259 2516 dbSNP
rs933814716 2517 dbSNP
rs973049467 2519 dbSNP
rs1335229237 2528 dbSNP
rs1267783536 2539 dbSNP
rs188320852 2546 dbSNP
rs754591693 2548 dbSNP
rs1280243792 2550 dbSNP
rs1232538116 2554 dbSNP
rs1329872423 2561 dbSNP
rs180678367 2565 dbSNP
rs778341726 2566 dbSNP
rs960818819 2571 dbSNP
rs533245733 2572 dbSNP
rs369381869 2573 dbSNP
rs752230803 2577 dbSNP
rs1375922253 2584 dbSNP
rs1026379949 2585 dbSNP
rs577173950 2585 dbSNP
rs950844263 2586 dbSNP
rs980073375 2586 dbSNP
rs549756344 2587 dbSNP
rs115572180 2589 dbSNP
rs1361805380 2593 dbSNP
rs1035591614 2597 dbSNP
rs1053779134 2598 dbSNP
rs1277163016 2600 dbSNP
rs1235640047 2607 dbSNP
rs762162643 2626 dbSNP
rs1486215465 2633 dbSNP
rs1207038712 2634 dbSNP
rs1437646772 2635 dbSNP
rs1346652154 2636 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 1477.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAGGA---AGUCggag 5'
            ||:|||||   ||||    
Target 5' ccAUUUUCCUGCCUCAG---- 3'
7 - 23
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000217109.4 | 3UTR | UUCACACCAUUUUCCUGCCUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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