miRTarBase - #MIRT519524


—
pre-miRNA Information
pre-miRNA hsa-mir-3663   
Genomic Coordinates chr10: 117167678 - 117167774
Description Homo sapiens miR-3663 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3663-5p
Sequence 21| GCUGGUCUGCGUGGUGCUCGG |41
Evidence Experimental
Experiments Northern
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs111525499 10 dbSNP
rs1186183324 11 dbSNP
rs1166397684 12 dbSNP
rs1391472885 17 dbSNP
rs1461514502 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF8   
Synonyms HF.18, Zfp128
Description zinc finger protein 8
Transcript NM_021089   
Expression
Putative miRNA Targets on ZNF8
3'UTR of ZNF8
(miRNA target sites are highlighted)		 
>ZNF8|NM_021089|3'UTR
   1 GAGAGAAACTTTGCTGATGACTTTTAACCACAAGTAAAAAATGTGGTAAGTCCACATAGTGTACTCATGGAAGGAGGGGC
  81 TGGGGGTAGAAATGTCATGGGTGACTTCTGACTTTCTAAGGAAATGATGCTTCCCAAGCACCCGAGGTTGGTTGGTCCCA
 161 AATCTATCAAACTCAGTGCCCTCTTTAGCGACATATTTTGTGACATTCCTTCCATTACACCACAGTGAGTTCACAGGTAA
 241 TATAACCTACCCACCTGTGTAATGTCAAAAAAAATCAATATGCGGCCCCATTTTGTAAAGGATCATTAAAATGAAAGTAA
 321 TTTATGGTAGAGTAAATTGTAGAGTAACGTGT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggcUCGUGGUGCGUCUGGUCg 5'
             |||||| || ||::::| 
Target 5' ccaAGCACC-CG-AGGTTGGt 3'
 134 - 152 100.00 -18.80
2 
miRNA  3' ggcucguGGUGCGUCUGGUcg 5'
                 |||: :| ||||  
Target 5' attccttCCAT-TACACCAca 3'
 205 - 224 97.00 -8.30
3 
miRNA  3' ggcUCGUGGU---GCG---UCUGGUcg 5'
             :|| |||   :|:   :||:||  
Target 5' tgcGGCCCCATTTTGTAAAGGATCAtt 3'
 281 - 307 94.00 -10.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30176209 2 COSMIC
COSN30147273 6 COSMIC
COSN30132334 21 COSMIC
COSN30107045 30 COSMIC
COSN27006573 64 COSMIC
COSN2502710 79 COSMIC
COSN30147282 111 COSMIC
COSN31500147 122 COSMIC
COSN30154626 127 COSMIC
COSN9852943 495 COSMIC
COSN4778825 1315 COSMIC
COSN22584860 1327 COSMIC
COSN30402704 1441 COSMIC
COSN25573950 1605 COSMIC
COSN28069250 1883 COSMIC
COSN27945817 2128 COSMIC
COSN7451286 2786 COSMIC
COSN25924804 2818 COSMIC
COSN7451287 2938 COSMIC
COSN23914464 3326 COSMIC
COSN24511492 3741 COSMIC
COSN22151857 3799 COSMIC
COSN24206943 3986 COSMIC
COSN21558256 4290 COSMIC
COSN23699486 4671 COSMIC
COSN17291277 4989 COSMIC
COSN8977207 5087 COSMIC
COSN21265887 5173 COSMIC
COSN22128750 5741 COSMIC
COSN28580907 5884 COSMIC
COSN26497428 6069 COSMIC
COSN8977208 6203 COSMIC
COSN22377549 6482 COSMIC
COSN7451289 6633 COSMIC
COSN19387349 6645 COSMIC
COSN8977209 6675 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1273143186 3 dbSNP
rs1477322458 6 dbSNP
rs745952741 7 dbSNP
rs1430792399 10 dbSNP
rs768593847 13 dbSNP
rs774128294 14 dbSNP
rs746660068 15 dbSNP
rs761895705 17 dbSNP
rs1402921890 18 dbSNP
rs188839301 20 dbSNP
rs755742462 22 dbSNP
rs1013621776 25 dbSNP
rs1405796637 26 dbSNP
rs1305120971 29 dbSNP
rs369820169 30 dbSNP
rs137872498 32 dbSNP
rs760338063 34 dbSNP
rs1351392698 35 dbSNP
rs1225380173 36 dbSNP
rs1281899375 37 dbSNP
rs1487798979 47 dbSNP
rs1222811254 49 dbSNP
rs765963067 51 dbSNP
rs1048311330 54 dbSNP
rs762764518 68 dbSNP
rs149221767 72 dbSNP
rs1411283418 73 dbSNP
rs76222139 78 dbSNP
rs528238206 82 dbSNP
rs547519091 83 dbSNP
rs1005180894 84 dbSNP
rs1202155795 94 dbSNP
rs1482282734 102 dbSNP
rs564218549 116 dbSNP
rs182460811 123 dbSNP
rs1055469968 135 dbSNP
rs549753275 144 dbSNP
rs569908594 145 dbSNP
rs955233065 148 dbSNP
rs143416316 149 dbSNP
rs1293961217 150 dbSNP
rs1346164694 150 dbSNP
rs1025547573 151 dbSNP
rs970900568 160 dbSNP
rs986542082 165 dbSNP
rs913607653 167 dbSNP
rs550129969 168 dbSNP
rs148373615 177 dbSNP
rs1357100219 179 dbSNP
rs989853283 180 dbSNP
rs979485819 190 dbSNP
rs924986284 191 dbSNP
rs938245405 195 dbSNP
rs1055344199 196 dbSNP
rs566299938 197 dbSNP
rs1359442016 206 dbSNP
rs918077110 208 dbSNP
rs1481792852 211 dbSNP
rs949519170 215 dbSNP
rs1047889725 226 dbSNP
rs1222687567 230 dbSNP
rs1248832691 237 dbSNP
rs534886788 246 dbSNP
rs774002278 248 dbSNP
rs1265065755 250 dbSNP
rs1489228766 250 dbSNP
rs1184437697 251 dbSNP
rs886497500 252 dbSNP
rs929834479 259 dbSNP
rs1225279495 267 dbSNP
rs563637905 267 dbSNP
rs187090690 284 dbSNP
rs529426677 285 dbSNP
rs113139862 286 dbSNP
rs894163672 287 dbSNP
rs1452312705 289 dbSNP
rs1038095958 290 dbSNP
rs537103837 291 dbSNP
rs1421252217 301 dbSNP
rs556999908 303 dbSNP
rs573529483 305 dbSNP
rs542924252 307 dbSNP
rs1245083940 314 dbSNP
rs1203501166 319 dbSNP
rs1485556861 322 dbSNP
rs1404710586 325 dbSNP
rs906710177 331 dbSNP
rs999609952 332 dbSNP
rs1028280420 336 dbSNP
rs1165159984 337 dbSNP
rs559371681 338 dbSNP
rs1351439398 340 dbSNP
rs1451414625 341 dbSNP
rs1384508194 343 dbSNP
rs955283181 349 dbSNP
rs1008438479 350 dbSNP
rs1437363290 352 dbSNP
rs1020806223 354 dbSNP
rs966834023 356 dbSNP
rs958254902 362 dbSNP
rs979227548 364 dbSNP
rs557417134 365 dbSNP
rs80298408 374 dbSNP
rs146357628 378 dbSNP
rs191202838 380 dbSNP
rs922641922 391 dbSNP
rs755632365 392 dbSNP
rs951448456 395 dbSNP
rs533259156 400 dbSNP
rs982581668 404 dbSNP
rs909733089 413 dbSNP
rs949653631 414 dbSNP
rs983995786 438 dbSNP
rs908062959 439 dbSNP
rs942092798 445 dbSNP
rs543462542 446 dbSNP
rs1290822316 447 dbSNP
rs1189860215 448 dbSNP
rs138339802 455 dbSNP
rs915556634 458 dbSNP
rs1249279549 467 dbSNP
rs900497858 472 dbSNP
rs182527953 474 dbSNP
rs934425372 478 dbSNP
rs535209825 481 dbSNP
rs1051769394 495 dbSNP
rs549681293 496 dbSNP
rs1389571389 503 dbSNP
rs894001399 504 dbSNP
rs1166429814 517 dbSNP
rs150617304 522 dbSNP
rs1373755781 537 dbSNP
rs1358685624 539 dbSNP
rs1448899609 542 dbSNP
rs1479467501 543 dbSNP
rs1011566179 550 dbSNP
rs1199993143 574 dbSNP
rs551834274 583 dbSNP
rs528738801 586 dbSNP
rs1371875983 608 dbSNP
rs1194915460 616 dbSNP
rs900086211 617 dbSNP
rs1228157135 621 dbSNP
rs1252652871 630 dbSNP
rs185915624 633 dbSNP
rs780510100 645 dbSNP
rs1322128737 656 dbSNP
rs1283218727 662 dbSNP
rs1406074419 670 dbSNP
rs1329364199 676 dbSNP
rs1210248268 677 dbSNP
rs1276119771 681 dbSNP
rs1441318252 683 dbSNP
rs902382506 685 dbSNP
rs1210282640 686 dbSNP
rs1397506374 689 dbSNP
rs1239130029 694 dbSNP
rs1468315325 702 dbSNP
rs1001015180 705 dbSNP
rs1177154133 706 dbSNP
rs1032018198 707 dbSNP
rs951417842 708 dbSNP
rs959115961 709 dbSNP
rs552013520 711 dbSNP
rs990421229 712 dbSNP
rs1024608061 719 dbSNP
rs1181121431 721 dbSNP
rs971372992 726 dbSNP
rs1473671081 731 dbSNP
rs1252237966 733 dbSNP
rs1201324813 735 dbSNP
rs1174505817 738 dbSNP
rs983745990 744 dbSNP
rs751837493 751 dbSNP
rs373842153 752 dbSNP
rs1263211866 754 dbSNP
rs1224706038 757 dbSNP
rs908034547 765 dbSNP
rs80307631 766 dbSNP
rs1278240251 770 dbSNP
rs1238816291 775 dbSNP
rs973990591 780 dbSNP
rs556747330 781 dbSNP
rs932072783 786 dbSNP
rs1337447569 789 dbSNP
rs915793655 791 dbSNP
rs1405744572 798 dbSNP
rs367691147 799 dbSNP
rs34417401 803 dbSNP
rs1365310626 804 dbSNP
rs1181439875 809 dbSNP
rs1243269075 819 dbSNP
rs924298903 831 dbSNP
rs535850239 835 dbSNP
rs1444734472 838 dbSNP
rs890490791 844 dbSNP
rs1352682683 847 dbSNP
rs1222120094 854 dbSNP
rs260472 856 dbSNP
rs1382340261 857 dbSNP
rs371734513 860 dbSNP
rs946865401 860 dbSNP
rs1343942516 863 dbSNP
rs1042340725 867 dbSNP
rs902435390 868 dbSNP
rs1000665813 869 dbSNP
rs375995655 875 dbSNP
rs1482005640 876 dbSNP
rs1204384027 878 dbSNP
rs1040284532 879 dbSNP
rs1032152320 881 dbSNP
rs1362262002 884 dbSNP
rs763038234 886 dbSNP
rs139667950 888 dbSNP
rs1483899030 892 dbSNP
rs375473852 893 dbSNP
rs1011977844 897 dbSNP
rs575065046 898 dbSNP
rs887133845 902 dbSNP
rs190251592 906 dbSNP
rs1174330704 911 dbSNP
rs1417500061 916 dbSNP
rs1024576973 918 dbSNP
rs970460773 920 dbSNP
rs1005539593 922 dbSNP
rs1169760267 923 dbSNP
rs435442 926 dbSNP
rs1017071050 931 dbSNP
rs777705391 945 dbSNP
rs529339512 946 dbSNP
rs973544100 969 dbSNP
rs1301171261 971 dbSNP
rs868220728 973 dbSNP
rs922109205 980 dbSNP
rs971316856 984 dbSNP
rs749162656 985 dbSNP
rs542648669 988 dbSNP
rs770713451 990 dbSNP
rs1276064743 994 dbSNP
rs981348777 995 dbSNP
rs924267808 996 dbSNP
rs955744242 1001 dbSNP
rs182567911 1002 dbSNP
rs1042113300 1003 dbSNP
rs923854996 1005 dbSNP
rs1344315058 1008 dbSNP
rs528799909 1009 dbSNP
rs552076641 1010 dbSNP
rs1215269747 1011 dbSNP
rs571885611 1016 dbSNP
rs575229962 1017 dbSNP
rs1452350854 1023 dbSNP
rs934215861 1032 dbSNP
rs1201242490 1034 dbSNP
rs149771160 1047 dbSNP
rs1389608940 1051 dbSNP
rs1448926884 1052 dbSNP
rs1295052644 1054 dbSNP
rs1439694964 1058 dbSNP
rs1353595562 1060 dbSNP
rs555756494 1065 dbSNP
rs370973089 1085 dbSNP
rs1046167882 1086 dbSNP
rs906285364 1087 dbSNP
rs1004516172 1088 dbSNP
rs1391946046 1096 dbSNP
rs1015022958 1101 dbSNP
rs567246354 1102 dbSNP
rs995116763 1106 dbSNP
rs1029149023 1107 dbSNP
rs1261305777 1108 dbSNP
rs1362652529 1119 dbSNP
rs971667438 1125 dbSNP
rs1303271254 1127 dbSNP
rs953559075 1129 dbSNP
rs1221865776 1134 dbSNP
rs987645031 1137 dbSNP
rs911941235 1143 dbSNP
rs536285583 1144 dbSNP
rs1297701666 1147 dbSNP
rs187559348 1148 dbSNP
rs925973292 1159 dbSNP
rs575605314 1170 dbSNP
rs192093293 1172 dbSNP
rs144187501 1173 dbSNP
rs1178783043 1183 dbSNP
rs947859044 1187 dbSNP
rs1417717358 1190 dbSNP
rs558394235 1191 dbSNP
rs1407694655 1193 dbSNP
rs759389237 1194 dbSNP
rs1179564248 1199 dbSNP
rs184164317 1214 dbSNP
rs1356761834 1220 dbSNP
rs1483582816 1221 dbSNP
rs1257703547 1223 dbSNP
rs1213544942 1234 dbSNP
rs1316192533 1236 dbSNP
rs1307403584 1239 dbSNP
rs1241932524 1241 dbSNP
rs544000496 1246 dbSNP
rs1005053671 1247 dbSNP
rs1036015949 1249 dbSNP
rs1464621682 1250 dbSNP
rs1305167100 1254 dbSNP
rs1209378287 1258 dbSNP
rs557472861 1259 dbSNP
rs964472459 1262 dbSNP
rs1422542085 1263 dbSNP
rs1421867090 1273 dbSNP
rs1383625979 1276 dbSNP
rs148686824 1277 dbSNP
rs995085757 1280 dbSNP
rs1029214422 1281 dbSNP
rs1424531911 1283 dbSNP
rs921433264 1286 dbSNP
rs1258347115 1287 dbSNP
rs574062089 1289 dbSNP
rs543061254 1290 dbSNP
rs1184752516 1292 dbSNP
rs80207533 1300 dbSNP
rs1473969259 1301 dbSNP
rs115432787 1304 dbSNP
rs1385902797 1313 dbSNP
rs1290591571 1315 dbSNP
rs1245045829 1316 dbSNP
rs940271331 1318 dbSNP
rs767585773 1321 dbSNP
rs1292777682 1322 dbSNP
rs1038349370 1325 dbSNP
rs1019541992 1327 dbSNP
rs1299276257 1328 dbSNP
rs967472902 1332 dbSNP
rs977931645 1342 dbSNP
rs1320581390 1343 dbSNP
rs1163256344 1346 dbSNP
rs144443463 1347 dbSNP
rs957403254 1358 dbSNP
rs1168453101 1359 dbSNP
rs1427953277 1367 dbSNP
rs991459621 1369 dbSNP
rs916460841 1379 dbSNP
rs1489814167 1382 dbSNP
rs1002627368 1383 dbSNP
rs565556167 1384 dbSNP
rs1358058878 1414 dbSNP
rs947994043 1416 dbSNP
rs981938064 1434 dbSNP
rs927816549 1435 dbSNP
rs1317930840 1436 dbSNP
rs940434899 1438 dbSNP
rs1021277546 1439 dbSNP
rs1209634221 1444 dbSNP
rs1302903307 1452 dbSNP
rs1270299708 1457 dbSNP
rs1036561532 1461 dbSNP
rs964766230 1471 dbSNP
rs898921692 1472 dbSNP
rs974514873 1474 dbSNP
rs1424405938 1475 dbSNP
rs1030456067 1477 dbSNP
rs531174488 1484 dbSNP
rs1479396513 1486 dbSNP
rs930254875 1495 dbSNP
rs1482303674 1497 dbSNP
rs1050104336 1499 dbSNP
rs1248000158 1504 dbSNP
rs375844402 1508 dbSNP
rs954452451 1512 dbSNP
rs117482759 1513 dbSNP
rs1221057448 1515 dbSNP
rs571953450 1516 dbSNP
rs1180396296 1517 dbSNP
rs1019093109 1525 dbSNP
rs1333130846 1526 dbSNP
rs903388573 1531 dbSNP
rs1305201900 1538 dbSNP
rs1446315550 1539 dbSNP
rs529753135 1541 dbSNP
rs1401170395 1556 dbSNP
rs1333418769 1557 dbSNP
rs546643394 1565 dbSNP
rs58258713 1568 dbSNP
rs919932880 1569 dbSNP
rs948688609 1574 dbSNP
rs1365244149 1587 dbSNP
rs1464101147 1595 dbSNP
rs56110050 1600 dbSNP
rs56407704 1603 dbSNP
rs1301759738 1605 dbSNP
rs766990284 1606 dbSNP
rs56179544 1609 dbSNP
rs538230389 1612 dbSNP
rs991425653 1613 dbSNP
rs1460428661 1617 dbSNP
rs1278552787 1622 dbSNP
rs1305913009 1623 dbSNP
rs55890806 1629 dbSNP
rs60941395 1635 dbSNP
rs55636211 1637 dbSNP
rs552102195 1639 dbSNP
rs367874688 1640 dbSNP
rs55768143 1646 dbSNP
rs1290428339 1647 dbSNP
rs1239755569 1648 dbSNP
rs1310729061 1650 dbSNP
rs1311658594 1652 dbSNP
rs61236270 1653 dbSNP
rs982463398 1654 dbSNP
rs55852018 1656 dbSNP
rs1339936386 1669 dbSNP
rs78922679 1671 dbSNP
rs75655115 1672 dbSNP
rs74654187 1674 dbSNP
rs1052865207 1679 dbSNP
rs891658286 1687 dbSNP
rs1382576129 1689 dbSNP
rs1347694726 1690 dbSNP
rs577911578 1691 dbSNP
rs1420043834 1699 dbSNP
rs5828757 1699 dbSNP
rs77024997 1699 dbSNP
rs796626792 1699 dbSNP
rs1251777933 1702 dbSNP
rs1443541764 1703 dbSNP
rs369739164 1705 dbSNP
rs1021999397 1715 dbSNP
rs531938038 1715 dbSNP
rs971923920 1716 dbSNP
rs867123671 1723 dbSNP
rs1354796611 1725 dbSNP
rs1288500165 1737 dbSNP
rs1244054993 1745 dbSNP
rs1355782055 1749 dbSNP
rs920316448 1750 dbSNP
rs1252143295 1758 dbSNP
rs930390828 1763 dbSNP
rs544259478 1764 dbSNP
rs147817248 1766 dbSNP
rs1174691246 1767 dbSNP
rs372122574 1768 dbSNP
rs954421214 1770 dbSNP
rs752018599 1772 dbSNP
rs1400396535 1781 dbSNP
rs1362205309 1782 dbSNP
rs574547090 1784 dbSNP
rs944974069 1793 dbSNP
rs961573063 1794 dbSNP
rs1166619400 1800 dbSNP
rs931258 1808 dbSNP
rs920136415 1818 dbSNP
rs903445299 1825 dbSNP
rs949010011 1829 dbSNP
rs999391084 1837 dbSNP
rs1273202541 1838 dbSNP
rs1365680052 1839 dbSNP
rs1386444309 1844 dbSNP
rs1488862663 1845 dbSNP
rs781300643 1846 dbSNP
rs1265761254 1848 dbSNP
rs928660066 1851 dbSNP
rs1054648788 1853 dbSNP
rs553489670 1854 dbSNP
rs891627127 1859 dbSNP
rs188764484 1860 dbSNP
rs1042904938 1862 dbSNP
rs1022905633 1864 dbSNP
rs1343505272 1868 dbSNP
rs1029984320 1882 dbSNP
rs796979586 1882 dbSNP
rs996127250 1882 dbSNP
rs35428818 1883 dbSNP
rs73058298 1884 dbSNP
rs1487280415 1885 dbSNP
rs1422288652 1886 dbSNP
rs79249732 1893 dbSNP
rs1170650844 1895 dbSNP
rs1438084434 1896 dbSNP
rs1267677122 1898 dbSNP
rs971411610 1906 dbSNP
rs543321453 1909 dbSNP
rs1186194954 1912 dbSNP
rs563674461 1917 dbSNP
rs1004628147 1921 dbSNP
rs1224030112 1926 dbSNP
rs1172204012 1934 dbSNP
rs1436217395 1936 dbSNP
rs576017928 1938 dbSNP
rs1035307965 1941 dbSNP
rs1199241992 1943 dbSNP
rs1014723209 1950 dbSNP
rs963166343 1956 dbSNP
rs962003734 1957 dbSNP
rs1347935107 1960 dbSNP
rs1457252384 1964 dbSNP
rs1276320255 1971 dbSNP
rs1294316033 1987 dbSNP
rs1398984884 1991 dbSNP
rs996048438 1992 dbSNP
rs972277647 1994 dbSNP
rs1389666550 1997 dbSNP
rs1296983045 1998 dbSNP
rs1174507821 2005 dbSNP
rs1433025722 2014 dbSNP
rs1366496734 2016 dbSNP
rs920452627 2024 dbSNP
rs1193184288 2029 dbSNP
rs1438039882 2030 dbSNP
rs1237740383 2041 dbSNP
rs1311264844 2049 dbSNP
rs1321475502 2050 dbSNP
rs1261189717 2051 dbSNP
rs1222850414 2057 dbSNP
rs141246666 2059 dbSNP
rs1280451427 2063 dbSNP
rs980408984 2072 dbSNP
rs756157583 2076 dbSNP
rs928630644 2081 dbSNP
rs985917023 2083 dbSNP
rs1206212711 2086 dbSNP
rs910210420 2095 dbSNP
rs543183747 2096 dbSNP
rs1449960294 2100 dbSNP
rs1301673403 2101 dbSNP
rs960068408 2105 dbSNP
rs8106692 2106 dbSNP
rs1178712502 2111 dbSNP
rs192798101 2120 dbSNP
rs1379919594 2125 dbSNP
rs1179427281 2131 dbSNP
rs924834577 2139 dbSNP
rs947508575 2144 dbSNP
rs1043259133 2149 dbSNP
rs1483552574 2155 dbSNP
rs1239091534 2166 dbSNP
rs1214184584 2175 dbSNP
rs921811658 2180 dbSNP
rs1423013446 2182 dbSNP
rs1165224098 2183 dbSNP
rs1286361303 2185 dbSNP
rs564046314 2203 dbSNP
rs934942235 2208 dbSNP
rs528706768 2230 dbSNP
rs1396890084 2240 dbSNP
rs1054539390 2243 dbSNP
rs8107581 2253 dbSNP
rs1420562725 2257 dbSNP
rs1319930652 2259 dbSNP
rs1396057924 2264 dbSNP
rs1051718531 2266 dbSNP
rs1398553008 2269 dbSNP
rs571715159 2269 dbSNP
rs145091164 2272 dbSNP
rs1159521797 2273 dbSNP
rs376707772 2281 dbSNP
rs1164211295 2284 dbSNP
rs1424404206 2290 dbSNP
rs76820079 2305 dbSNP
rs1415892633 2316 dbSNP
rs1282932854 2323 dbSNP
rs1003260757 2328 dbSNP
rs1487876818 2329 dbSNP
rs1263589292 2330 dbSNP
rs184390504 2338 dbSNP
rs962254090 2339 dbSNP
rs994618495 2340 dbSNP
rs1264449612 2342 dbSNP
rs758817071 2348 dbSNP
rs1322936472 2351 dbSNP
rs1229177424 2367 dbSNP
rs1027551348 2381 dbSNP
rs1217307219 2397 dbSNP
rs1340355493 2399 dbSNP
rs1295510212 2406 dbSNP
rs1299220027 2407 dbSNP
rs868853440 2413 dbSNP
rs993449646 2417 dbSNP
rs8106960 2429 dbSNP
rs951893072 2432 dbSNP
rs537773289 2433 dbSNP
rs1458528612 2448 dbSNP
rs985969203 2454 dbSNP
rs531258706 2459 dbSNP
rs960287427 2464 dbSNP
rs1424187391 2465 dbSNP
rs1195610472 2468 dbSNP
rs1431167985 2479 dbSNP
rs988745258 2487 dbSNP
rs1228122297 2488 dbSNP
rs1210048440 2493 dbSNP
rs536309713 2493 dbSNP
rs969190807 2493 dbSNP
rs1230093968 2496 dbSNP
rs1329700393 2496 dbSNP
rs978898539 2497 dbSNP
rs921756106 2498 dbSNP
rs910265775 2499 dbSNP
rs965841615 2500 dbSNP
rs1393028243 2502 dbSNP
rs1329416735 2503 dbSNP
rs74542748 2508 dbSNP
rs1235601459 2513 dbSNP
rs778928478 2517 dbSNP
rs548430788 2518 dbSNP
rs1376849314 2521 dbSNP
rs568197913 2525 dbSNP
rs911781702 2526 dbSNP
rs1471512863 2531 dbSNP
rs1158684683 2533 dbSNP
rs112949057 2534 dbSNP
rs1457779439 2536 dbSNP
rs550743572 2540 dbSNP
rs533968106 2543 dbSNP
rs1343364935 2544 dbSNP
rs1255745608 2550 dbSNP
rs780672042 2551 dbSNP
rs1373504005 2554 dbSNP
rs187971467 2555 dbSNP
rs573363967 2556 dbSNP
rs1315125443 2557 dbSNP
rs1348982109 2558 dbSNP
rs1409653100 2563 dbSNP
rs539095041 2564 dbSNP
rs1044860311 2568 dbSNP
rs1172978169 2572 dbSNP
rs1467329948 2573 dbSNP
rs1351029338 2576 dbSNP
rs1157666043 2577 dbSNP
rs1224912214 2581 dbSNP
rs1275924139 2583 dbSNP
rs904942196 2585 dbSNP
rs1239437318 2587 dbSNP
rs368677752 2588 dbSNP
rs896049748 2589 dbSNP
rs1201391049 2590 dbSNP
rs550816642 2595 dbSNP
rs1010468223 2596 dbSNP
rs372902068 2619 dbSNP
rs948857072 2620 dbSNP
rs1281374046 2624 dbSNP
rs1445862511 2632 dbSNP
rs968784467 2635 dbSNP
rs377125457 2636 dbSNP
rs979254785 2639 dbSNP
rs1029040528 2640 dbSNP
rs375401764 2643 dbSNP
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rs1047771095 5537 dbSNP
rs1411108379 5538 dbSNP
rs1180840983 5547 dbSNP
rs549606923 5548 dbSNP
rs1380829351 5549 dbSNP
rs1004155430 5560 dbSNP
rs1295350542 5561 dbSNP
rs991122954 5565 dbSNP
rs1331561891 5570 dbSNP
rs915632959 5584 dbSNP
rs1227857061 5585 dbSNP
rs949823027 5587 dbSNP
rs566250493 5595 dbSNP
rs1227671380 5596 dbSNP
rs1259652300 5601 dbSNP
rs548156622 5605 dbSNP
rs116265518 5606 dbSNP
rs1347797248 5610 dbSNP
rs1423980338 5612 dbSNP
rs935590935 5612 dbSNP
rs1186042938 5616 dbSNP
rs183948702 5625 dbSNP
rs3745140 5629 dbSNP
rs1028034078 5630 dbSNP
rs1189685479 5630 dbSNP
rs955319115 5656 dbSNP
rs1322514382 5661 dbSNP
rs1007865656 5668 dbSNP
rs1292122969 5674 dbSNP
rs1226201283 5680 dbSNP
rs536640670 5683 dbSNP
rs1364446685 5703 dbSNP
rs1298202104 5704 dbSNP
rs557264290 5705 dbSNP
rs1010881392 5707 dbSNP
rs1437069548 5707 dbSNP
rs966916325 5709 dbSNP
rs371872486 5715 dbSNP
rs1458096788 5733 dbSNP
rs1351197143 5739 dbSNP
rs1166233977 5741 dbSNP
rs1039743764 5743 dbSNP
rs751889488 5743 dbSNP
rs1260742119 5744 dbSNP
rs1428953463 5749 dbSNP
rs3745141 5756 dbSNP
rs1416050582 5757 dbSNP
rs1460925457 5764 dbSNP
rs1165766949 5768 dbSNP
rs1352083078 5771 dbSNP
rs1488939264 5780 dbSNP
rs925448881 5804 dbSNP
rs1029488372 5812 dbSNP
rs1341515841 5821 dbSNP
rs1275377838 5823 dbSNP
rs1229555752 5825 dbSNP
rs865863704 5827 dbSNP
rs1310292168 5833 dbSNP
rs542862607 5839 dbSNP
rs1387122310 5854 dbSNP
rs951328474 5859 dbSNP
rs1452224427 5863 dbSNP
rs959526975 5871 dbSNP
rs1305761686 5883 dbSNP
rs60404734 5884 dbSNP
rs572666790 5894 dbSNP
rs1169895448 5895 dbSNP
rs1463987147 5906 dbSNP
rs1376375092 5924 dbSNP
rs1017229013 5940 dbSNP
rs374763391 5941 dbSNP
rs991091854 5947 dbSNP
rs541161242 5949 dbSNP
rs1402314574 5951 dbSNP
rs1180316289 5952 dbSNP
rs781067966 5953 dbSNP
rs1279623329 5954 dbSNP
rs1353189752 5958 dbSNP
rs1232096246 5968 dbSNP
rs186715762 5970 dbSNP
rs1197571801 5995 dbSNP
rs1482269113 5997 dbSNP
rs971108803 6004 dbSNP
rs1323044941 6030 dbSNP
rs1233755423 6034 dbSNP
rs1047741926 6036 dbSNP
rs981634297 6048 dbSNP
rs907914532 6056 dbSNP
rs1286174198 6060 dbSNP
rs1460408381 6061 dbSNP
rs939910708 6070 dbSNP
rs77694402 6073 dbSNP
rs543441594 6074 dbSNP
rs1486070419 6085 dbSNP
rs1195584650 6086 dbSNP
rs898410287 6087 dbSNP
rs1475016780 6090 dbSNP
rs946973974 6091 dbSNP
rs1472392327 6093 dbSNP
rs777266983 6103 dbSNP
rs76191115 6109 dbSNP
rs1184155660 6110 dbSNP
rs1422098975 6114 dbSNP
rs899867795 6115 dbSNP
rs191231042 6117 dbSNP
rs1200988750 6120 dbSNP
rs1159012060 6122 dbSNP
rs184141797 6125 dbSNP
rs73570607 6127 dbSNP
rs1280926357 6138 dbSNP
rs1311462192 6139 dbSNP
rs1373196818 6145 dbSNP
rs140722173 6146 dbSNP
rs1284480276 6147 dbSNP
rs1408859889 6148 dbSNP
rs1020577562 6151 dbSNP
rs1380694164 6153 dbSNP
rs1389710653 6157 dbSNP
rs1160488680 6165 dbSNP
rs1456539825 6170 dbSNP
rs551548654 6171 dbSNP
rs966385965 6174 dbSNP
rs898401144 6175 dbSNP
rs1188255247 6178 dbSNP
rs188498250 6179 dbSNP
rs747457162 6180 dbSNP
rs971078601 6187 dbSNP
rs959902449 6198 dbSNP
rs981135663 6205 dbSNP
rs1031806421 6212 dbSNP
rs990989034 6217 dbSNP
rs918102665 6225 dbSNP
rs970833574 6237 dbSNP
rs1247511477 6242 dbSNP
rs1277884559 6250 dbSNP
rs1485250386 6257 dbSNP
rs1434890490 6265 dbSNP
rs1327410688 6278 dbSNP
rs1211849305 6281 dbSNP
rs537110782 6291 dbSNP
rs769018022 6297 dbSNP
rs544380979 6302 dbSNP
rs1426626065 6303 dbSNP
rs941971235 6313 dbSNP
rs1167861770 6319 dbSNP
rs1176701233 6326 dbSNP
rs1037724331 6332 dbSNP
rs915439398 6336 dbSNP
rs946942901 6340 dbSNP
rs1196405541 6342 dbSNP
rs1409288293 6343 dbSNP
rs777051485 6349 dbSNP
rs1267605434 6360 dbSNP
rs1224122307 6367 dbSNP
rs1339418822 6376 dbSNP
rs77714399 6382 dbSNP
rs1172363444 6385 dbSNP
rs192829543 6391 dbSNP
rs890994053 6394 dbSNP
rs1435795485 6407 dbSNP
rs536156384 6409 dbSNP
rs943784569 6411 dbSNP
rs1272303823 6414 dbSNP
rs868298853 6417 dbSNP
rs548561858 6419 dbSNP
rs902287314 6420 dbSNP
rs552832406 6422 dbSNP
rs1360545355 6452 dbSNP
rs1439325727 6454 dbSNP
rs1303955843 6455 dbSNP
rs1406900475 6467 dbSNP
rs372290273 6475 dbSNP
rs1000456361 6477 dbSNP
rs1032450252 6479 dbSNP
rs1410474035 6483 dbSNP
rs868020905 6486 dbSNP
rs1421550097 6497 dbSNP
rs1377503969 6499 dbSNP
rs1477555986 6500 dbSNP
rs1429615637 6501 dbSNP
rs1242198213 6502 dbSNP
rs1201157796 6503 dbSNP
rs1481844922 6504 dbSNP
rs1301230851 6509 dbSNP
rs1205182139 6515 dbSNP
rs1438958655 6517 dbSNP
rs887168344 6524 dbSNP
rs1217878453 6528 dbSNP
rs185175532 6529 dbSNP
rs1284276633 6532 dbSNP
rs1038155783 6543 dbSNP
rs1012950826 6554 dbSNP
rs770106980 6558 dbSNP
rs1287871312 6562 dbSNP
rs1443011037 6563 dbSNP
rs1356249446 6569 dbSNP
rs538441025 6572 dbSNP
rs778541428 6582 dbSNP
rs1332089113 6585 dbSNP
rs1025133005 6588 dbSNP
rs1436310778 6589 dbSNP
rs1178243556 6603 dbSNP
rs1203854671 6604 dbSNP
rs1471414864 6608 dbSNP
rs1238831105 6617 dbSNP
rs970850775 6618 dbSNP
rs983621745 6620 dbSNP
rs773263804 6623 dbSNP
rs1235153458 6634 dbSNP
rs963470575 6655 dbSNP
rs1264153971 6656 dbSNP
rs973417017 6657 dbSNP
rs921951559 6658 dbSNP
rs1174693543 6659 dbSNP
rs532912494 6659 dbSNP
rs557868051 6659 dbSNP
rs578039366 6660 dbSNP
rs1426773362 6661 dbSNP
rs554105111 6665 dbSNP
rs932583536 6670 dbSNP
rs1169366365 6672 dbSNP
rs543850427 6677 dbSNP
rs955966844 6686 dbSNP
rs985817862 6688 dbSNP
rs763112802 6690 dbSNP
rs1387505339 6692 dbSNP
rs796137423 6698 dbSNP
rs766308770 6701 dbSNP
rs1411040170 6705 dbSNP
rs902256245 6706 dbSNP
rs936447212 6716 dbSNP
rs1053453139 6718 dbSNP
rs190125478 6719 dbSNP
rs921487501 6720 dbSNP
rs894836901 6721 dbSNP
rs1260454835 6724 dbSNP
rs1011922418 6729 dbSNP
rs1216810808 6738 dbSNP
rs745790362 6746 dbSNP
rs552000848 6756 dbSNP
rs987187907 6756 dbSNP
rs1360159294 6758 dbSNP
rs906803160 6761 dbSNP
rs1276426872 6764 dbSNP
rs908569938 6765 dbSNP
rs1337245150 6766 dbSNP
rs1432700732 6766 dbSNP
rs1005026964 6767 dbSNP
rs1432469224 6769 dbSNP
rs751542667 6774 dbSNP
rs1259015979 6775 dbSNP
rs1163536933 6776 dbSNP
rs530333124 6789 dbSNP
rs1166041360 6790 dbSNP
rs1038458069 6793 dbSNP
rs920006419 6796 dbSNP
rs963439930 6803 dbSNP
rs1187411678 6805 dbSNP
rs1487006326 6814 dbSNP
rs1439419373 6816 dbSNP
rs28757810 6819 dbSNP
rs1221895177 6824 dbSNP
rs1452716670 6832 dbSNP
rs3087604 6849 dbSNP
rs543373364 6853 dbSNP
rs376123338 6859 dbSNP
rs987495248 6861 dbSNP
rs1240690593 6866 dbSNP
rs1296095017 6867 dbSNP
rs528061118 6868 dbSNP
rs113484196 6869 dbSNP
rs977874600 6872 dbSNP
rs1366931053 6875 dbSNP
rs1305566522 6879 dbSNP
rs556221051 6879 dbSNP
rs1475324697 6906 dbSNP
rs1192472299 6907 dbSNP
rs528736805 6910 dbSNP
rs1171642549 6913 dbSNP
rs923813796 6924 dbSNP
rs552013425 6930 dbSNP
rs746773838 6935 dbSNP
rs1199000544 6937 dbSNP
rs1466679024 6950 dbSNP
rs565431723 6956 dbSNP
rs530543237 6959 dbSNP
rs58851323 6966 dbSNP
rs1203043132 6969 dbSNP
rs1480304497 6975 dbSNP
rs1251782064 6982 dbSNP
rs572606654 6982 dbSNP
rs1310237937 6990 dbSNP
rs755831591 7021 dbSNP
rs1405846561 7023 dbSNP
rs997040737 7025 dbSNP
rs59678004 7031 dbSNP
rs1408685452 7032 dbSNP
rs1396463374 7043 dbSNP
rs567182825 7046 dbSNP
rs955826793 7052 dbSNP
rs947686781 7058 dbSNP
rs1324457913 7063 dbSNP
rs1357821235 7072 dbSNP
rs1429851577 7087 dbSNP
rs145850750 7108 dbSNP
rs1418553841 7111 dbSNP
rs908539423 7111 dbSNP
rs1251269469 7121 dbSNP
rs1197514898 7123 dbSNP
rs961438173 7128 dbSNP
rs546533458 7130 dbSNP
rs974035133 7132 dbSNP
rs906772066 7138 dbSNP
rs1325326400 7143 dbSNP
rs1342629602 7174 dbSNP
rs1237766941 7178 dbSNP
rs1335858331 7179 dbSNP
rs1308473147 7192 dbSNP
rs753384714 7203 dbSNP
rs1381156691 7206 dbSNP
rs1293522393 7207 dbSNP
rs1470487732 7210 dbSNP
rs570987416 7213 dbSNP
rs1157243948 7214 dbSNP
rs1453270510 7231 dbSNP
rs537282885 7232 dbSNP
rs1357193924 7239 dbSNP
rs1422045016 7250 dbSNP
rs1044224131 7252 dbSNP
rs1036530987 7255 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 7554.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggcucgUGGUGCGUCUGGUcg 5'
                ||||  | |||||  
Target 5' ------ACCAGCCUGACCAac 3'
 		1 - 15
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000196548.5 | 3UTR | ACCAGCCUGACCAACACGGUGAAACCCCAUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
203 hsa-miR-3663-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT222528 CRCP CGRP receptor component 2 2
MIRT442432 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 6
MIRT450423 BCL2L14 BCL2 like 14 2 2
MIRT456341 RCSD1 RCSD domain containing 1 2 2
MIRT479763 CCND1 cyclin D1 2 2
MIRT487162 IFRD1 interferon related developmental regulator 1 2 8
MIRT495471 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT497193 DUSP18 dual specificity phosphatase 18 2 2
MIRT499717 PAGR1 PAXIP1 associated glutamate rich protein 1 2 10
MIRT502681 CSNK1G3 casein kinase 1 gamma 3 2 8
MIRT503641 POLR2F RNA polymerase II subunit F 2 4
MIRT510824 SBNO1 strawberry notch homolog 1 2 4
MIRT512347 ZNF665 zinc finger protein 665 2 4
MIRT512528 ATCAY ATCAY, caytaxin 2 4
MIRT513246 FBXO17 F-box protein 17 2 4
MIRT513502 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT516033 PTAFR platelet activating factor receptor 2 2
MIRT517669 TRIM72 tripartite motif containing 72 2 2
MIRT517691 FAM175A abraxas 1, BRCA1 A complex subunit 2 2
MIRT519524 ZNF8 zinc finger protein 8 2 2
MIRT520953 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT522074 ORAI2 ORAI calcium release-activated calcium modulator 2 2 4
MIRT525333 CNGB1 cyclic nucleotide gated channel beta 1 2 2
MIRT526504 POU5F1B POU class 5 homeobox 1B 2 2
MIRT527847 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT529211 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT530071 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT530639 PPIC peptidylprolyl isomerase C 2 4
MIRT530679 CHRNB1 cholinergic receptor nicotinic beta 1 subunit 2 4
MIRT532177 SEC14L5 SEC14 like lipid binding 5 2 2
MIRT532432 DHX33 DEAH-box helicase 33 2 2
MIRT532832 ZNF704 zinc finger protein 704 2 2
MIRT534236 SLC25A16 solute carrier family 25 member 16 2 4
MIRT535115 PLXNA2 plexin A2 2 2
MIRT535563 OMD osteomodulin 2 2
MIRT536487 KIAA1468 KIAA1468 2 2
MIRT538371 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT539931 NUCB1 nucleobindin 1 2 4
MIRT562305 GINM1 glycoprotein integral membrane 1 2 2
MIRT563280 BBS10 Bardet-Biedl syndrome 10 2 2
MIRT618205 C22orf39 chromosome 22 open reading frame 39 2 2
MIRT620113 HARBI1 harbinger transposase derived 1 2 2
MIRT621189 FAM153B family with sequence similarity 153 member B 2 2
MIRT623755 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT624059 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT625016 TMIGD2 transmembrane and immunoglobulin domain containing 2 2 2
MIRT626073 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT627875 PAN2 PAN2 poly(A) specific ribonuclease subunit 2 2
MIRT629306 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT630446 IDE insulin degrading enzyme 2 2
MIRT631000 ZNF573 zinc finger protein 573 2 2
MIRT631093 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT631282 SGSM1 small G protein signaling modulator 1 2 2
MIRT631530 MYO6 myosin VI 2 2
MIRT631642 WDR91 WD repeat domain 91 2 4
MIRT631825 TMEM154 transmembrane protein 154 2 2
MIRT632778 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT633278 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT633658 SLC28A1 solute carrier family 28 member 1 2 2
MIRT634071 PLIN3 perilipin 3 2 2
MIRT634159 YME1L1 YME1 like 1 ATPase 2 2
MIRT634227 TMEM132B transmembrane protein 132B 2 2
MIRT636401 MYO5A myosin VA 2 2
MIRT638678 GCLM glutamate-cysteine ligase modifier subunit 2 2
MIRT640231 TOMM40 translocase of outer mitochondrial membrane 40 2 2
MIRT640304 PRR13 proline rich 13 2 2
MIRT641125 NPHP3 nephrocystin 3 2 2
MIRT643422 ERVMER34-1 endogenous retrovirus group MER34 member 1, envelope 2 2
MIRT643700 KIAA0586 KIAA0586 2 2
MIRT644314 NFKBID NFKB inhibitor delta 2 2
MIRT644345 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT645736 POLR3A RNA polymerase III subunit A 2 2
MIRT648058 TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 2 2
MIRT649462 UBA5 ubiquitin like modifier activating enzyme 5 2 2
MIRT650009 KLB klotho beta 2 2
MIRT650567 YIPF4 Yip1 domain family member 4 2 2
MIRT652639 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT653887 SGK3 serum/glucocorticoid regulated kinase family member 3 2 2
MIRT655369 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT659116 DENND6A DENN domain containing 6A 2 2
MIRT659520 CHST3 carbohydrate sulfotransferase 3 2 2
MIRT659946 C8orf44-SGK3 C8orf44-SGK3 readthrough 2 2
MIRT661384 RHCG Rh family C glycoprotein 2 2
MIRT662910 MED18 mediator complex subunit 18 2 2
MIRT663107 NPR1 natriuretic peptide receptor 1 2 2
MIRT663759 ZNF285 zinc finger protein 285 2 2
MIRT664554 MKI67IP nucleolar protein interacting with the FHA domain of MKI67 1 1
MIRT664611 LIMD1 LIM domains containing 1 2 2
MIRT666193 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT666794 PSMD1 proteasome 26S subunit, non-ATPase 1 2 2
MIRT668752 DDX19B DEAD-box helicase 19B 2 2
MIRT669601 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT669704 AAK1 AP2 associated kinase 1 2 2
MIRT669812 STOML1 stomatin like 1 2 2
MIRT669927 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT669951 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT670005 GPR156 G protein-coupled receptor 156 2 4
MIRT670051 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT670301 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670390 EMP2 epithelial membrane protein 2 2 2
MIRT670457 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670486 DCUN1D2 defective in cullin neddylation 1 domain containing 2 2 2
MIRT670568 GLTP glycolipid transfer protein 2 2
MIRT671061 KIF1B kinesin family member 1B 2 2
MIRT671085 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT671306 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT671807 WISP3 WNT1 inducible signaling pathway protein 3 2 2
MIRT671956 SPPL3 signal peptide peptidase like 3 2 2
MIRT671993 OSTF1 osteoclast stimulating factor 1 2 2
MIRT672092 WDR5B WD repeat domain 5B 2 2
MIRT672273 SHE Src homology 2 domain containing E 2 2
MIRT672447 TTPAL alpha tocopherol transfer protein like 2 2
MIRT672451 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT673652 CYCS cytochrome c, somatic 2 2
MIRT674003 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT674054 ATXN3 ataxin 3 2 2
MIRT674248 NUP62 nucleoporin 62 2 2
MIRT674437 MIOX myo-inositol oxygenase 2 4
MIRT674476 BCL2L15 BCL2 like 15 2 2
MIRT675472 NUBPL nucleotide binding protein like 2 2
MIRT675667 IVD isovaleryl-CoA dehydrogenase 2 2
MIRT675978 FAM126B family with sequence similarity 126 member B 2 2
MIRT676064 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT676120 SCIMP SLP adaptor and CSK interacting membrane protein 2 2
MIRT676241 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT676257 PBOV1 prostate and breast cancer overexpressed 1 2 2
MIRT676388 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676744 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT676880 ENSA endosulfine alpha 2 2
MIRT676905 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT676922 KLHDC8A kelch domain containing 8A 2 2
MIRT676968 RNF19B ring finger protein 19B 2 2
MIRT677048 ZNF34 zinc finger protein 34 2 2
MIRT677114 SS18L1 SS18L1, nBAF chromatin remodeling complex subunit 2 2
MIRT677324 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT677466 PDLIM3 PDZ and LIM domain 3 2 2
MIRT677584 TRIM65 tripartite motif containing 65 2 2
MIRT677646 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT677736 MOB4 MOB family member 4, phocein 2 2
MIRT677813 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT677830 TSPYL1 TSPY like 1 2 2
MIRT678083 EIF2A eukaryotic translation initiation factor 2A 2 2
MIRT678158 ZNF724P zinc finger protein 724 2 2
MIRT678256 FXN frataxin 2 2
MIRT678326 FBLIM1 filamin binding LIM protein 1 2 2
MIRT678419 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678588 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT678598 ARPC2 actin related protein 2/3 complex subunit 2 2 2
MIRT678831 PDE6A phosphodiesterase 6A 2 2
MIRT678945 MYADM myeloid associated differentiation marker 2 2
MIRT679046 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT679201 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT679205 FAM9B family with sequence similarity 9 member B 2 2
MIRT679223 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679270 POLM DNA polymerase mu 2 2
MIRT679288 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT679316 NPHP1 nephrocystin 1 2 2
MIRT679485 CYTIP cytohesin 1 interacting protein 2 2
MIRT679551 LIPG lipase G, endothelial type 2 2
MIRT679625 TTC31 tetratricopeptide repeat domain 31 2 2
MIRT679649 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT679761 TLR6 toll like receptor 6 2 2
MIRT680124 ZNF576 zinc finger protein 576 2 2
MIRT680186 ZNF554 zinc finger protein 554 2 2
MIRT684282 CDK9 cyclin dependent kinase 9 2 2
MIRT689671 RBM23 RNA binding motif protein 23 2 2
MIRT690031 CCDC90B coiled-coil domain containing 90B 2 2
MIRT691447 CXorf36 chromosome X open reading frame 36 2 2
MIRT691547 FLYWCH2 FLYWCH family member 2 2 2
MIRT691726 LARS leucyl-tRNA synthetase 2 2
MIRT692029 ARSK arylsulfatase family member K 2 2
MIRT692635 SUSD1 sushi domain containing 1 2 2
MIRT693823 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT693864 IYD iodotyrosine deiodinase 2 2
MIRT693977 ZNF70 zinc finger protein 70 2 2
MIRT694145 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT695486 TRAT1 T-cell receptor associated transmembrane adaptor 1 2 2
MIRT695544 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT695599 TMEM199 transmembrane protein 199 2 2
MIRT696003 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696020 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT696039 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT696310 NIP7 NIP7, nucleolar pre-rRNA processing protein 2 2
MIRT696400 CORO7 coronin 7 2 2
MIRT696595 ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 2 2
MIRT698044 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT698139 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT702561 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT703018 HEATR5A HEAT repeat containing 5A 2 2
MIRT705118 C4orf29 abhydrolase domain containing 18 2 2
MIRT706303 NT5C2 5'-nucleotidase, cytosolic II 2 2
MIRT706610 CYB5B cytochrome b5 type B 2 2
MIRT706729 RFK riboflavin kinase 2 2
MIRT707321 TMEM184B transmembrane protein 184B 2 2
MIRT708652 LYRM7 LYR motif containing 7 2 2
MIRT710520 NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 2 2
MIRT714283 KIF1C kinesin family member 1C 2 2
MIRT720438 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT720612 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT722756 SIRPB2 signal regulatory protein beta 2 2 2
MIRT723296 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT724380 NEK8 NIMA related kinase 8 2 2
MIRT725105 THRA thyroid hormone receptor, alpha 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3663 Platinum-based doublet chemotherapy sensitive High Lung Adenocarcinoma tissue
hsa-mir-3663 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-3663 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3663 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-mir-3663 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-mir-3663 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-3663-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (HS578T)
hsa-miR-3663-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-3663-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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