miRTarBase - #MIRT520542


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pre-miRNA Information
pre-miRNA hsa-mir-4446   
Genomic Coordinates chr3: 113594876 - 113594942
Description Homo sapiens miR-4446 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4446-5p
Sequence 8| AUUUCCCUGCCAUUCCCUUGGC |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1356015605 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TPPP   
Synonyms TPPP/p25, TPPP1, p24, p25, p25alpha
Description tubulin polymerization promoting protein
Transcript NM_007030   
Expression
Putative miRNA Targets on TPPP
3'UTR of TPPP
(miRNA target sites are highlighted)		 
>TPPP|NM_007030|3'UTR
   1 CCCCCGCTCCATGCCTCGCGGCACTGCCGGTGTCCCCAGAGCAGGGACTCTGTCACCTCGCACTTCATTACATTCCTGTA
  81 CTAACTGGGGCAGAACTCAGACGGGTGCCCCAGAGGGGGCTGGGGGGCGGCCAGGCCCAGGCCTCCCTCCTGCCCCTCCT
 161 CCTACCGGATGCCCCCAGCACTCCCCTCTCAAACCAGGTTTGGGCCCCAGTTCGCTGACCCTCCTAATACACCTGCCTCG
 241 TCCTCAGCCATTTCCAAAGTGTCTCGCGGATCACACCACACTGGGCACGTGGTTTGCAGGTCAAAGGGGCGTTTTAAAGC
 321 AGCTGGCTGTCATGGCAACAGGAGGCTGTGCTGACCTCCTGAGCGGCAGACACCTTCCAGGAGCCCTGAGGGTGGCAGGA
 401 GCTAACCCCAACCAGCAGGCAACTAACACGGAATTGGCCCCACACCGGACGTGGGAGGTGTCTGTGGGGCCCGAGGCCTG
 481 TCCTGTGTGCAGCGGACACCACGGGGCCTTCCTGCTTTCCTGGGCAGAGGGCAGAGTGAGGCCACCTGGCGGGGGTGCTG
 561 GGCGCCTGGCACATGTGTGGGGAAGCCGGTCACATGGACACACCTGTGCACACATGCCTACAGGCCAGCTCTGTGCCAAG
 641 GGCAACCTAGGTAAAACGAAAGCCGTCAGGGGCAGTGGGCGGCTTCCCGGCTGACCACAGTGGCTTGGACTGTGAGGGTA
 721 GAGTAGGCTCGCTTTGCTTTCCTGAGAAGATGCGGTGGCTGCCTATGTTCTCAGAGCGGGTCTGGGAAGATTCAGAATGT
 801 CCGGTCCCTGTGGTGTTGCCAGGCAAGAGACACGAAGTGCCGAGACACTCCTCGCCTCACCGCGTGACAGAGCCTCTGCC
 881 CGGCCCTCCCGTTCGCCCGTCCTCACTAGCTGCACCCTGTTTGCTCGCAGACCTCCCATTGCCACAGCCCAAGCACCTTC
 961 TTCAACTCTCCCAAAATGGCTCAGCCTAACCTCTCCTGGCCAATCCCCCCCGCCGGAGAGCAGGACACTAGGGAGGACCC
1041 CCAGTCCTGCAGTGTCTGTGGGGGTTTCTCTGCCAGCAGGGGGCTGAGCAGAGCCCATCCAGGACACTCCACACTGCCAG
1121 GACACACCCAGGCGGCCCGCCCTTGCCTGTCTGCACCTGGGGAGAAGCCGGCGCTCCTGCTCCCTCCTGGGGAGGCTGAC
1201 GGGTGTGGCCACCCGCTGTCACAATGGCACACTGCCACTGTCCCTTGGCACGCACACAGCCACAGCCACACGTGTGACCT
1281 GCTGGGCCGTGGTTCTGGAGTCTACCTGCGGATGAGCCTGCGGCAGTCCTGGGGAAACTTTTCCAGAGCCTGTTAGCCCG
1361 TGGCTACGGTCAGGCTCTGGCCAGGGCAGAGGGCTGCCCAGGGCCAGGCTCACAGTACAGGAGGGTGGCGAGGCCCCTCC
1441 CTCACTGGCACGCATGAGCACCACCCGCCTCCCCGACTCCCAAGAGTGCACCTGCTGCGGCCACAGCTCCGTGGAAGGAC
1521 TCCCCCTACCTGAGCAGAGCAGAAGCCCCAGGGCGGAGCTCCCAGCCAGCATGGTCCGCTGAGGGCTGGGGGGCGGTCTC
1601 CGAGGCCCCTCAACAGAGAAGCCTCCACCTGAGGATGGGGAGGACCTGGCAGGCAGCTTCCACGGCAGGGCTGGGAAGTT
1681 CAGTGCCTGGAAATAAAGAGCAAGGAAAAATGGACCTCAGGCTTCGTGGCTCCTTTAGGATGTCACCTCACCGGCCTGGG
1761 GAAGGCGGGGGGTGCCCAAGCCCAGCCCTGTGCCCCCGCTGAACCTGGCTGGACCGCGTGTGAAAGGCAGAACTAACGTG
1841 CGGAAACATTTGAAAACAACTCTGAATGTGCGGTTCGGAATCACCCGATCACAGACGAGCGGTCACCGGAATCGCCCGGT
1921 CACAGACGAGCAGTCATCGGACTCACCCGATCACAGACGAGCGGTCACCGGAATCGCCCGATCACAGACGAGCGGCCACC
2001 GGAATCGCCCAATCACAGACAAGCAGTCATCGGAATCACCCGATCACAGACGAGCAGTCATCGGACTCACCCGATCACAG
2081 ACGAGCGGTCACCAGACTCGCCCGATCACAGACGAGCAGTCATCGGAATCACCCGATCACAGACGAGCAGTCATCGGACT
2161 CACCCGATCACAGACGAGCGGTCACCAGAATCGCCCGATCACAGACGAGCAGTCATCGGAATCACCCGATCACAGACGAG
2241 TGGCCACCGGAATCACCCGATAACAGCCCATCACAACTCCAAAGCCCTTGTGTTGAAAAGGCCGAGGACGAGTGGTCACC
2321 AAACAGGGTGGCTCCCCAGGTCCCGAAGCCTGAGACCCGGAAGGCCCTGGCACCCTTACACCCTCGGACTCCTGCCCTCC
2401 TCGGCCTCCCTGGCCCCAGCGCGGCTCCACCCTGGGCTGCGTCTCCTGGTCACAGGCTGCGTTTCTCCTTTCTGTCCGTG
2481 GGCAGCCCAGTCCCCACAGTCACGGCCAAGCCACGCAGAACGAACATGACTCCAGAGGACCTCGCCCTGGAGCTGAGCCT
2561 GGCGCCGGGTCAGGACGGAGGGAAGGGCGGGTTGGGGTCCGCGGGTCCTCACACCGCACGGCAGGCACAGAGGCTCGCCA
2641 GGCCCTGATCCGGTCTGTGGGGACGAGGGACACTGAGGAGAGGTGCTGGGCACCAGGACGCTGCCTCCTGGTCCCTGGTT
2721 GGCCTCAGACAAGCACGGCCTCGAGAAAAGAGCCAAGCGCATCGGGAGCACACCAGAAACCGGCCCTGAGCACGAGAAGA
2801 GCCTCCGCCCGGCCCGGGCACCACCCGACCTCGCAGGGAGCAGGCCCTGTCACCGACGGGTCACCTCGCCCACACGGCCA
2881 GCACCGACTCACCACAGCCCTTCCCAGACCTGGCTGGAGTGGCCGGAGCGGCGGGGCTCATGGCTCCCATCTTGGCCCCT
2961 GGAGGTGAGCTCATTCACAGAAGTGGTCCCTTCACTCTGAGAGAGAAAATCGTGGCGTGCATCCCAAACCCTAGGCCACG
3041 CCTGTGGGTTTCGTGAATGAGATCGAGGCTGCTGTGGCACCCTGCCCGTCCTGGCCTGGAGCACCCTGGGATCCTGGAGG
3121 GAGAGGCCCCACGCCCCCACTCTCCCTCCACACTTCCAGGGTTGGTGCCCACGAGTTAGAGGCACGCCCTCCCCCAGCGG
3201 CCCTCAGGCTTTTCTCAGACATGCGGGAGCCAGGAGAGCACCCTTCTCCACTCAGCTCCAAAGCGAATCTTTGAAAACAC
3281 CCACTCGGCTCCCATCTCTGTCACCTAGCCAGGAGGGGTAGCAAAAATAAAGTCACGAGGACATAGTGGTCACCACTGTC
3361 AGTTACAACTTGTCTGTGGAATCCGTAATTGCATCTGTGTGCCGCCTCCGAACACAGAACATTGTTTGGACGGCAGCCCC
3441 ACTGCACATAACAGACCCGTGCATCTTCCTCAGTCAGTTTCTGAATATTGTGAATTCAGGCAGGTGTGTGTTCTCTTCTG
3521 CATGTTTTTATGCACTGCCAATTAGCTTCTACTAACCACGGTTCAACAGAAAATAAATGTGTATTTGTGAATAACAAACT
3601 GCACAACCTGCAAACCAGGAGAGAGGGACAGGTTCTGTCAGGGGTGACACCAGGACACAGGGACAGGTTCTGTCGGGGGT
3681 GACACCAGGACACAGGGACAGGTTCTGTCATGGGTGACACGAGGACACAGGGACAGGTTCTATCATGGGTGACACCAGGA
3761 GAGAGGGACAGGTTCTGTTGGGGGTGACAAGAGGAGACAGGGACAGGTTCTGTCGGGGGTGACACCAGGAGAGAGGGACA
3841 GGTTCTGTCAGGGGTGACACCAGGAGAGAGGGACAGGTTCTGTTGGGGGTGACACCAGGACACAGGAATAGGTTCTGTCG
3921 GGAGGACAGTGCTGATCGTGTCTCAGCATCAGGAAAGGAGAAAGGCAGAGGGAGAGCGCTGAGAAGACTGTTCACGCCAG
4001 AGTGCTTATTTATTTTTAATTTACTGCTATAGGATAAGCAACCAGGTAGTGTTCCTAACAATTAGCGTTACCAAAATTAA
4081 AGTTCAAATTATATGTTTAAAATATTGTAGAAGATATATATTTATACTGGACTACTTTTACACCTTCTAATATCCTGTCC
4161 AAGTTTGGGCGCAGATGGTGGAGTTGGGCTGGCATCATGTCCTGTGGCCGCCCCACTTGCCTGTTGGTGCCACTCCATCC
4241 CGGGCCCCAGGGATGCCAGCTCAGGGCTGACCACAGCAGCCCTGCGTGGGCATCACCTCCTACCCCAGCCCCCATCCTGG
4321 GCTGCTGCGGCCGCCTGCTTTTGTGAATGGTGTTTTGTTGGCACAGGGCCTGTCCTGTGTTTTCACACAGGCCTGTGGCT
4401 CCTGCTGTACAAGTGGAGTGGGGAGGAGTTGAGATGGAGATGCCTTGGCCCTGGACACTTACCTGTCCCTCTACTGGCCC
4481 AGCTCATCTCCTCCTGTGGGCAATCACGCGTGCACTGGCCACCCTCCCACCCCACAGCACACACCACGAGGGGATGGCAC
4561 AGGGGGAAGATGAGGCTGGACCGTGATGTTATCAATAGGCTAGAACGTCCTTCAAACACTGAACCTGCATCTTTCCTCCT
4641 CTTACTACTGAACACTTTGTGAGCTCTGGTGGTCCAGGGTGCAGCGTTTGTCCCTGGGCATGTGATGGGGAGTCCTGGGC
4721 ACATCGAGATGCTTTACTTCTTTCTTTCGACCTCTTAAAAAACTAAACCAAGCCAAACCACAAAGGAAATCTGCACAACT
4801 TAAGAGAAACTTGAAAGGGATCGTGTAACTACTAGTTTGTACTAAGTTTTTTTCAAGAAAGGGAAACAAATTTATATATA
4881 TATATATATATATATATGTGCAATATATTTTTACACTGTGTGATTAACATTAGGGAGTACTGAGTGCATCACTTTATCAG
4961 TGTGACGGGTGATGTCCACGTCATGGCTGTTCTGACTCTGAAAGCCACTTCTGCTGATGTCTAAACCGCACTCACCGCGG
5041 ACGTCCGCGGGGTGGGGTGGCCCTGCTGTTCCTCCTGCAGGTGAGAGGTGTGGTGTTGCCTGTTGGACTTGCTGTTGAGC
5121 CTGGCTTGCAAACCTGTAGTGAAACAGCTCGTGTCTGTGTGCACACTGCTCCTGTGTCTGCTGTCGTTAACATTGTGTGT
5201 CAAGTTGGTAAAGTGACAAATAAAGGTGTTAAAACATGGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cggUUCC-CUUACCG--UCCCUUUa 5'
             |||| ||| |||  |||||:| 
Target 5' ggaAAGGAGAAAGGCAGAGGGAGAg 3'
 3952 - 3976 153.00 -19.60
2 
miRNA  3' cgGUUCCCUUACC--GUCCCUUUa 5'
            |:||||:||||  |||||::| 
Target 5' caCGAGGGGATGGCACAGGGGGAa 3'
 4545 - 4568 150.00 -29.40
3 
miRNA  3' cgGUUCCCUUACCGUCCCUUUa 5'
            |||  |||    ||||||| 
Target 5' ttCAA--GAA----AGGGAAAc 3'
 4852 - 4867 146.00 -10.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN18729909 7 COSMIC
COSN8892381 19 COSMIC
COSN27670312 27 COSMIC
COSN26999488 39 COSMIC
COSN26999487 59 COSMIC
COSN30111456 60 COSMIC
COSN30148513 66 COSMIC
COSN18730004 69 COSMIC
COSN30157496 93 COSMIC
COSN30499190 129 COSMIC
COSN22138300 451 COSMIC
COSN7951228 561 COSMIC
COSN32056823 617 COSMIC
COSN1318358 640 COSMIC
COSN19597576 775 COSMIC
COSN31612147 891 COSMIC
COSN1318352 900 COSMIC
COSN20100927 1004 COSMIC
COSN19226778 1079 COSMIC
COSN31959936 1171 COSMIC
COSN2484056 1190 COSMIC
COSN9455242 1198 COSMIC
COSN20100925 1464 COSMIC
COSN32065647 1468 COSMIC
COSN16238392 1726 COSMIC
COSN8228466 1774 COSMIC
COSN32063517 1817 COSMIC
COSN27216084 1915 COSMIC
COSN16988873 1965 COSMIC
COSN23964107 1976 COSMIC
COSN15662247 1990 COSMIC
COSN17961308 1999 COSMIC
COSN31263532 2021 COSMIC
COSN19069598 2072 COSMIC
COSN15133362 2082 COSMIC
COSN20176994 2097 COSMIC
COSN16043448 2125 COSMIC
COSN24294906 2156 COSMIC
COSN23950731 2159 COSMIC
COSN20490960 2187 COSMIC
COSN7951185 2460 COSMIC
COSN20218845 2544 COSMIC
COSN22581029 2764 COSMIC
COSN32108165 2929 COSMIC
COSN32056867 3016 COSMIC
COSN22289301 3064 COSMIC
COSN23438132 3656 COSMIC
COSN22114047 3658 COSMIC
COSN32056698 3732 COSMIC
COSN20100923 3780 COSMIC
COSN22890713 3780 COSMIC
COSN20091150 3849 COSMIC
COSN23110203 3850 COSMIC
COSN505759 3860 COSMIC
COSN20091149 3895 COSMIC
COSN20091147 3896 COSMIC
COSN20091146 3924 COSMIC
COSN2115251 4110 COSMIC
COSN20091145 4161 COSMIC
COSN29973705 4412 COSMIC
COSN17597581 4441 COSMIC
COSN2115225 4766 COSMIC
COSN21683872 4798 COSMIC
COSN2115224 4804 COSMIC
COSN20100922 4873 COSMIC
COSN23373667 4896 COSMIC
COSN9955704 5090 COSMIC
rs9918259 2125 GWAS
rs11738281 2670 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs772899254 1 dbSNP
rs770112220 2 dbSNP
rs562343856 3 dbSNP
rs547341735 5 dbSNP
rs755485475 6 dbSNP
rs746991540 8 dbSNP
rs1156856425 9 dbSNP
rs780210857 12 dbSNP
rs201438644 17 dbSNP
rs750639997 18 dbSNP
rs145705783 19 dbSNP
rs752597482 20 dbSNP
rs1313153431 22 dbSNP
rs1251461715 24 dbSNP
rs1180814474 25 dbSNP
rs767505209 28 dbSNP
rs759524225 29 dbSNP
rs778375264 30 dbSNP
rs564482827 39 dbSNP
rs1309728649 40 dbSNP
rs1268233718 44 dbSNP
rs894164938 46 dbSNP
rs1225015430 51 dbSNP
rs372932216 52 dbSNP
rs889437044 52 dbSNP
rs1049426965 54 dbSNP
rs1441096846 56 dbSNP
rs931016269 59 dbSNP
rs546234393 61 dbSNP
rs763639551 62 dbSNP
rs72707016 69 dbSNP
rs563847076 72 dbSNP
rs1180017330 77 dbSNP
rs1414317494 85 dbSNP
rs939895229 88 dbSNP
rs1291465388 90 dbSNP
rs192338474 97 dbSNP
rs1416025849 100 dbSNP
rs574595647 102 dbSNP
rs1005127198 103 dbSNP
rs552814071 107 dbSNP
rs1463599330 108 dbSNP
rs1407620094 113 dbSNP
rs773987283 114 dbSNP
rs959553665 115 dbSNP
rs1335856814 117 dbSNP
rs887661198 119 dbSNP
rs1422752807 120 dbSNP
rs34019075 120 dbSNP
rs370756173 122 dbSNP
rs557250609 124 dbSNP
rs1478445138 127 dbSNP
rs1373097739 128 dbSNP
rs558125705 128 dbSNP
rs760137654 129 dbSNP
rs1459128837 135 dbSNP
rs537088587 146 dbSNP
rs1438500700 149 dbSNP
rs1198074152 153 dbSNP
rs1244969182 155 dbSNP
rs921246081 156 dbSNP
rs1040137467 159 dbSNP
rs1173957980 164 dbSNP
rs1389357727 166 dbSNP
rs979434049 167 dbSNP
rs1209986502 172 dbSNP
rs1404319700 177 dbSNP
rs571884966 177 dbSNP
rs944128978 181 dbSNP
rs569632212 186 dbSNP
rs977576182 194 dbSNP
rs1443791097 199 dbSNP
rs1304560321 205 dbSNP
rs554675144 213 dbSNP
rs914795339 215 dbSNP
rs1226413664 224 dbSNP
rs1253368904 225 dbSNP
rs72707013 239 dbSNP
rs1010135914 240 dbSNP
rs771456734 242 dbSNP
rs1308034879 249 dbSNP
rs1443995425 251 dbSNP
rs1401777584 254 dbSNP
rs16900955 265 dbSNP
rs547275520 266 dbSNP
rs1007772445 267 dbSNP
rs1357227201 268 dbSNP
rs1002994767 276 dbSNP
rs1463452129 281 dbSNP
rs1454527677 282 dbSNP
rs553359836 284 dbSNP
rs1015096700 287 dbSNP
rs77925095 288 dbSNP
rs1441662291 289 dbSNP
rs1327176985 293 dbSNP
rs1244372358 298 dbSNP
rs1282453739 300 dbSNP
rs898231681 302 dbSNP
rs887626998 303 dbSNP
rs552281427 306 dbSNP
rs1206618457 307 dbSNP
rs996080470 310 dbSNP
rs900453727 311 dbSNP
rs1039702378 318 dbSNP
rs944036841 321 dbSNP
rs1185022786 324 dbSNP
rs1258278388 334 dbSNP
rs1211307997 341 dbSNP
rs1475285268 342 dbSNP
rs939780953 355 dbSNP
rs917717234 359 dbSNP
rs1353407306 361 dbSNP
rs1456115153 361 dbSNP
rs149780266 363 dbSNP
rs1386164211 364 dbSNP
rs879059586 365 dbSNP
rs1237454020 366 dbSNP
rs563610811 372 dbSNP
rs748230415 373 dbSNP
rs937932961 377 dbSNP
rs914731409 383 dbSNP
rs1287828291 386 dbSNP
rs1326909459 387 dbSNP
rs1241140866 388 dbSNP
rs1307012703 396 dbSNP
rs990314567 398 dbSNP
rs1482826629 402 dbSNP
rs958947285 406 dbSNP
rs1198363578 412 dbSNP
rs1376936755 418 dbSNP
rs927539863 420 dbSNP
rs979383110 425 dbSNP
rs1409165695 427 dbSNP
rs542324621 429 dbSNP
rs1161979507 432 dbSNP
rs913916278 434 dbSNP
rs971484283 436 dbSNP
rs529798138 437 dbSNP
rs868464578 442 dbSNP
rs966529580 443 dbSNP
rs376291788 446 dbSNP
rs116639356 447 dbSNP
rs576714223 450 dbSNP
rs558845329 451 dbSNP
rs1230714169 452 dbSNP
rs79742881 458 dbSNP
rs1348102482 464 dbSNP
rs996049361 470 dbSNP
rs1164258356 472 dbSNP
rs751670828 473 dbSNP
rs898136525 482 dbSNP
rs1179459066 483 dbSNP
rs1019284977 486 dbSNP
rs1258932129 493 dbSNP
rs114815741 494 dbSNP
rs1435522788 497 dbSNP
rs868498358 502 dbSNP
rs187492216 503 dbSNP
rs536358050 510 dbSNP
rs1463641406 514 dbSNP
rs1298829155 521 dbSNP
rs1366739653 525 dbSNP
rs1041731523 527 dbSNP
rs946129794 528 dbSNP
rs1214017140 536 dbSNP
rs1438662695 537 dbSNP
rs1305294763 538 dbSNP
rs1355479215 541 dbSNP
rs183379471 545 dbSNP
rs1227174377 546 dbSNP
rs1272122980 547 dbSNP
rs72707011 549 dbSNP
rs535276365 550 dbSNP
rs1264359650 551 dbSNP
rs927540697 552 dbSNP
rs1043594135 554 dbSNP
rs982119988 555 dbSNP
rs1455026507 557 dbSNP
rs1188148476 559 dbSNP
rs913865756 563 dbSNP
rs571146009 564 dbSNP
rs907519361 566 dbSNP
rs983148985 573 dbSNP
rs1401616891 575 dbSNP
rs1459787753 575 dbSNP
rs1394940360 582 dbSNP
rs1385994116 587 dbSNP
rs951772645 588 dbSNP
rs1363555259 594 dbSNP
rs1162864124 595 dbSNP
rs944801225 604 dbSNP
rs912004017 609 dbSNP
rs986299583 615 dbSNP
rs369004442 632 dbSNP
rs1027406422 635 dbSNP
rs1469313436 646 dbSNP
rs974537513 647 dbSNP
rs192429156 657 dbSNP
rs745836624 658 dbSNP
rs964913926 664 dbSNP
rs1027838884 665 dbSNP
rs1187378019 677 dbSNP
rs1413125306 680 dbSNP
rs973629222 681 dbSNP
rs1166992350 686 dbSNP
rs1418417122 688 dbSNP
rs1456646521 690 dbSNP
rs552861822 697 dbSNP
rs1009217842 700 dbSNP
rs530784378 717 dbSNP
rs570041377 718 dbSNP
rs548344923 730 dbSNP
rs1004323166 731 dbSNP
rs1262021594 735 dbSNP
rs1234522394 737 dbSNP
rs1208832498 740 dbSNP
rs1293375225 749 dbSNP
rs187644367 750 dbSNP
rs567623079 753 dbSNP
rs893188907 754 dbSNP
rs530728288 757 dbSNP
rs1449136465 761 dbSNP
rs540809785 777 dbSNP
rs780914284 778 dbSNP
rs1190077481 789 dbSNP
rs1001922512 799 dbSNP
rs905009986 802 dbSNP
rs937502863 803 dbSNP
rs1401128894 821 dbSNP
rs1220287700 823 dbSNP
rs1175103647 829 dbSNP
rs758965094 831 dbSNP
rs1043542442 833 dbSNP
rs906009430 834 dbSNP
rs1312899010 837 dbSNP
rs532201153 841 dbSNP
rs1442073573 842 dbSNP
rs1278362177 844 dbSNP
rs757050077 853 dbSNP
rs950340840 854 dbSNP
rs751194121 856 dbSNP
rs1280072906 858 dbSNP
rs1392983975 862 dbSNP
rs908163707 863 dbSNP
rs1281104896 864 dbSNP
rs983076787 866 dbSNP
rs1179573706 870 dbSNP
rs1234474532 874 dbSNP
rs930300929 876 dbSNP
rs371200915 881 dbSNP
rs777356913 882 dbSNP
rs986595097 885 dbSNP
rs565002852 890 dbSNP
rs543717958 891 dbSNP
rs3749611 894 dbSNP
rs752196881 895 dbSNP
rs920724042 896 dbSNP
rs764848868 898 dbSNP
rs548522543 899 dbSNP
rs554554484 903 dbSNP
rs1254493187 911 dbSNP
rs375191867 915 dbSNP
rs1303073168 919 dbSNP
rs1369308529 926 dbSNP
rs1010163954 927 dbSNP
rs1338991910 928 dbSNP
rs957386825 930 dbSNP
rs1194076788 935 dbSNP
rs1213818341 936 dbSNP
rs1456911221 937 dbSNP
rs1438272107 943 dbSNP
rs182982824 968 dbSNP
rs1250871352 969 dbSNP
rs1034708702 974 dbSNP
rs1001868605 977 dbSNP
rs904959373 980 dbSNP
rs1002011185 981 dbSNP
rs1169103546 982 dbSNP
rs1396623078 984 dbSNP
rs1410999498 988 dbSNP
rs1325876447 989 dbSNP
rs1339833185 991 dbSNP
rs1392737701 993 dbSNP
rs1443650286 1003 dbSNP
rs1273966526 1005 dbSNP
rs905980510 1008 dbSNP
rs1333113511 1009 dbSNP
rs1046315285 1010 dbSNP
rs1271977859 1010 dbSNP
rs1304400941 1011 dbSNP
rs1022078579 1012 dbSNP
rs28364690 1012 dbSNP
rs1446161032 1013 dbSNP
rs1398153147 1014 dbSNP
rs1014425468 1015 dbSNP
rs1260816483 1023 dbSNP
rs886657185 1026 dbSNP
rs1198941652 1028 dbSNP
rs892365274 1038 dbSNP
rs1373124839 1042 dbSNP
rs1410964648 1043 dbSNP
rs190687738 1052 dbSNP
rs1164820476 1055 dbSNP
rs1416239532 1065 dbSNP
rs1048021212 1074 dbSNP
rs766732808 1076 dbSNP
rs139750945 1077 dbSNP
rs1380711937 1081 dbSNP
rs753395123 1082 dbSNP
rs890429626 1084 dbSNP
rs1050422286 1085 dbSNP
rs1291516094 1088 dbSNP
rs1336806214 1094 dbSNP
rs932044729 1095 dbSNP
rs1467876512 1096 dbSNP
rs1259908938 1097 dbSNP
rs1348328781 1099 dbSNP
rs920715741 1101 dbSNP
rs1037852390 1113 dbSNP
rs188445756 1119 dbSNP
rs1193821202 1120 dbSNP
rs1185101808 1123 dbSNP
rs943111440 1128 dbSNP
rs577536515 1130 dbSNP
rs28364691 1133 dbSNP
rs966585244 1134 dbSNP
rs913799999 1138 dbSNP
rs989340375 1139 dbSNP
rs1438381590 1149 dbSNP
rs1452156210 1156 dbSNP
rs1277822659 1158 dbSNP
rs1385859306 1167 dbSNP
rs957978583 1169 dbSNP
rs1032964889 1170 dbSNP
rs1415293914 1171 dbSNP
rs1349756218 1172 dbSNP
rs537751981 1173 dbSNP
rs980439663 1186 dbSNP
rs1261122244 1189 dbSNP
rs78298254 1196 dbSNP
rs1024399313 1200 dbSNP
rs1014809132 1201 dbSNP
rs112704282 1213 dbSNP
rs1047947565 1214 dbSNP
rs545957220 1215 dbSNP
rs1443021634 1224 dbSNP
rs771637363 1230 dbSNP
rs1340447925 1234 dbSNP
rs761716397 1241 dbSNP
rs943058603 1246 dbSNP
rs1398174958 1248 dbSNP
rs774294305 1251 dbSNP
rs575447026 1255 dbSNP
rs1377349940 1256 dbSNP
rs1466671497 1257 dbSNP
rs1297696891 1258 dbSNP
rs945153780 1260 dbSNP
rs962356293 1264 dbSNP
rs1307408156 1271 dbSNP
rs1370028252 1271 dbSNP
rs565813214 1271 dbSNP
rs989306119 1272 dbSNP
rs547505142 1276 dbSNP
rs749111472 1278 dbSNP
rs980473421 1281 dbSNP
rs532138183 1287 dbSNP
rs907996780 1288 dbSNP
rs1057307994 1289 dbSNP
rs1454163744 1292 dbSNP
rs1159860366 1296 dbSNP
rs781210388 1298 dbSNP
rs1433990880 1302 dbSNP
rs370654595 1307 dbSNP
rs969056771 1309 dbSNP
rs549765265 1310 dbSNP
rs950805596 1311 dbSNP
rs1438366142 1313 dbSNP
rs1486532745 1321 dbSNP
rs989168487 1330 dbSNP
rs956487231 1331 dbSNP
rs1213651882 1333 dbSNP
rs531632717 1337 dbSNP
rs182484555 1338 dbSNP
rs1215613200 1350 dbSNP
rs995007216 1359 dbSNP
rs1230258314 1360 dbSNP
rs899381940 1367 dbSNP
rs542630754 1368 dbSNP
rs777638703 1377 dbSNP
rs572100756 1381 dbSNP
rs890111709 1386 dbSNP
rs150646144 1405 dbSNP
rs1488914717 1409 dbSNP
rs1186184896 1418 dbSNP
rs778617877 1419 dbSNP
rs1028942504 1420 dbSNP
rs545141021 1421 dbSNP
rs996106811 1423 dbSNP
rs1430435106 1429 dbSNP
rs899140309 1430 dbSNP
rs1037707734 1432 dbSNP
rs1005341818 1435 dbSNP
rs1166764560 1436 dbSNP
rs945122436 1439 dbSNP
rs892253732 1440 dbSNP
rs1286827942 1446 dbSNP
rs3749610 1451 dbSNP
rs936514362 1452 dbSNP
rs926501214 1458 dbSNP
rs980731477 1462 dbSNP
rs949351444 1466 dbSNP
rs1322762833 1467 dbSNP
rs1343111392 1467 dbSNP
rs1015821604 1468 dbSNP
rs1400805121 1470 dbSNP
rs747257364 1471 dbSNP
rs1044597914 1474 dbSNP
rs1486980867 1475 dbSNP
rs748327669 1475 dbSNP
rs3833633 1476 dbSNP
rs72043784 1476 dbSNP
rs762814995 1476 dbSNP
rs1161406717 1481 dbSNP
rs1474167036 1482 dbSNP
rs1167075992 1483 dbSNP
rs1414235651 1491 dbSNP
rs1399961800 1497 dbSNP
rs917244139 1497 dbSNP
rs992861804 1498 dbSNP
rs914871988 1499 dbSNP
rs1419949755 1500 dbSNP
rs989171515 1501 dbSNP
rs950740577 1509 dbSNP
rs923735805 1510 dbSNP
rs1286536808 1511 dbSNP
rs1380539197 1520 dbSNP
rs559102443 1525 dbSNP
rs758603909 1529 dbSNP
rs1223520323 1532 dbSNP
rs1282624830 1533 dbSNP
rs575122460 1537 dbSNP
rs1244085033 1543 dbSNP
rs987695038 1544 dbSNP
rs1217673329 1546 dbSNP
rs537285877 1554 dbSNP
rs757926246 1555 dbSNP
rs973539222 1557 dbSNP
rs1237914831 1574 dbSNP
rs963557903 1576 dbSNP
rs553082612 1578 dbSNP
rs1028847618 1579 dbSNP
rs974617630 1585 dbSNP
rs576656430 1589 dbSNP
rs1439902947 1590 dbSNP
rs535028504 1593 dbSNP
rs1373094103 1594 dbSNP
rs963298794 1594 dbSNP
rs1007800008 1595 dbSNP
rs1360203135 1599 dbSNP
rs890739268 1602 dbSNP
rs1278116981 1604 dbSNP
rs1379639853 1613 dbSNP
rs1278087354 1614 dbSNP
rs1004925247 1618 dbSNP
rs554868877 1623 dbSNP
rs886505383 1624 dbSNP
rs1345996652 1630 dbSNP
rs1029997080 1634 dbSNP
rs536214252 1637 dbSNP
rs1271572897 1639 dbSNP
rs1437118591 1642 dbSNP
rs1202398564 1645 dbSNP
rs1430937836 1648 dbSNP
rs1234385313 1651 dbSNP
rs1009189054 1654 dbSNP
rs1348927885 1656 dbSNP
rs1323390178 1664 dbSNP
rs1192781685 1665 dbSNP
rs1392817499 1666 dbSNP
rs1455326399 1672 dbSNP
rs1462532912 1673 dbSNP
rs1395196491 1682 dbSNP
rs565749402 1688 dbSNP
rs1003383433 1696 dbSNP
rs1409874210 1698 dbSNP
rs906018962 1699 dbSNP
rs1044546508 1700 dbSNP
rs1447892900 1711 dbSNP
rs1325664111 1715 dbSNP
rs752433609 1716 dbSNP
rs1476739100 1726 dbSNP
rs892179895 1728 dbSNP
rs1187340247 1732 dbSNP
rs893426073 1738 dbSNP
rs1053477873 1744 dbSNP
rs1338893225 1745 dbSNP
rs1212736337 1749 dbSNP
rs547448027 1751 dbSNP
rs377248611 1753 dbSNP
rs1045330475 1757 dbSNP
rs753210504 1758 dbSNP
rs1452944836 1759 dbSNP
rs949322521 1763 dbSNP
rs917830807 1764 dbSNP
rs1241001928 1765 dbSNP
rs538754249 1766 dbSNP
rs373982180 1767 dbSNP
rs1197259765 1771 dbSNP
rs761739773 1773 dbSNP
rs933059358 1777 dbSNP
rs919318962 1778 dbSNP
rs974607841 1780 dbSNP
rs549940756 1782 dbSNP
rs1016205971 1785 dbSNP
rs1366521168 1788 dbSNP
rs1324538353 1789 dbSNP
rs963826978 1790 dbSNP
rs983845288 1792 dbSNP
rs1280200896 1794 dbSNP
rs1318461447 1795 dbSNP
rs1232646408 1796 dbSNP
rs1271016759 1797 dbSNP
rs950720031 1798 dbSNP
rs1210058340 1805 dbSNP
rs190528445 1807 dbSNP
rs910714978 1813 dbSNP
rs1036119522 1814 dbSNP
rs986744913 1815 dbSNP
rs754389714 1816 dbSNP
rs954943841 1817 dbSNP
rs147523972 1818 dbSNP
rs1009156536 1820 dbSNP
rs1187925040 1821 dbSNP
rs1416143981 1824 dbSNP
rs1460347228 1828 dbSNP
rs1459712951 1835 dbSNP
rs956389346 1837 dbSNP
rs1170965130 1838 dbSNP
rs549319895 1842 dbSNP
rs1393554271 1847 dbSNP
rs1414079890 1848 dbSNP
rs114492372 1850 dbSNP
rs750683127 1851 dbSNP
rs559116179 1852 dbSNP
rs1176844073 1856 dbSNP
rs1259946568 1857 dbSNP
rs75273371 1857 dbSNP
rs1485089886 1861 dbSNP
rs902136887 1861 dbSNP
rs1051875511 1862 dbSNP
rs933049593 1863 dbSNP
rs1188635567 1864 dbSNP
rs921717961 1868 dbSNP
rs1438043002 1870 dbSNP
rs545069967 1871 dbSNP
rs569852406 1872 dbSNP
rs577655995 1873 dbSNP
rs185692384 1877 dbSNP
rs543971779 1880 dbSNP
rs1305982785 1881 dbSNP
rs1333811256 1882 dbSNP
rs13159747 1883 dbSNP
rs1038868604 1884 dbSNP
rs576580537 1886 dbSNP
rs1231378365 1887 dbSNP
rs13159744 1888 dbSNP
rs896376188 1896 dbSNP
rs1201581390 1897 dbSNP
rs1389176084 1900 dbSNP
rs13185472 1901 dbSNP
rs1298659678 1903 dbSNP
rs1321666760 1904 dbSNP
rs1447045978 1906 dbSNP
rs554805656 1907 dbSNP
rs929901673 1908 dbSNP
rs1379484138 1910 dbSNP
rs1466465835 1911 dbSNP
rs1297595000 1913 dbSNP
rs1397839093 1914 dbSNP
rs879167687 1914 dbSNP
rs919249190 1917 dbSNP
rs1435635501 1918 dbSNP
rs13185464 1919 dbSNP
rs950696495 1923 dbSNP
rs1234599023 1927 dbSNP
rs1251180477 1928 dbSNP
rs148387237 1929 dbSNP
rs13159722 1932 dbSNP
rs879112160 1934 dbSNP
rs1468178099 1937 dbSNP
rs879117029 1937 dbSNP
rs572063990 1939 dbSNP
rs111870111 1942 dbSNP
rs13159717 1945 dbSNP
rs970115349 1947 dbSNP
rs1467152487 1948 dbSNP
rs11750066 1949 dbSNP
rs1212031705 1950 dbSNP
rs1393521752 1958 dbSNP
rs1485834685 1959 dbSNP
rs1294993512 1962 dbSNP
rs1023031880 1963 dbSNP
rs13189056 1965 dbSNP
rs1339035743 1966 dbSNP
rs11746917 1968 dbSNP
rs553749061 1969 dbSNP
rs866973678 1970 dbSNP
rs1307656839 1973 dbSNP
rs1267382589 1975 dbSNP
rs11749396 1976 dbSNP
rs1185967513 1979 dbSNP
rs1227607820 1980 dbSNP
rs1478751387 1981 dbSNP
rs1194375997 1982 dbSNP
rs1353469339 1986 dbSNP
rs1037742239 1989 dbSNP
rs1314564246 1990 dbSNP
rs1166671799 1993 dbSNP
rs1350058640 1994 dbSNP
rs375645417 1995 dbSNP
rs1341885648 1996 dbSNP
rs1470646026 1996 dbSNP
rs942126327 1997 dbSNP
rs1415136423 1998 dbSNP
rs538701202 1999 dbSNP
rs1287279862 2001 dbSNP
rs1379082561 2001 dbSNP
rs1455437048 2004 dbSNP
rs1364384645 2006 dbSNP
rs1215401209 2007 dbSNP
rs9313160 2007 dbSNP
rs1474548299 2010 dbSNP
rs149869507 2010 dbSNP
rs70955280 2011 dbSNP
rs9313159 2011 dbSNP
rs1266820183 2012 dbSNP
rs1420651669 2015 dbSNP
rs1489350452 2016 dbSNP
rs9313158 2021 dbSNP
rs1189148657 2022 dbSNP
rs1011627602 2025 dbSNP
rs1183338160 2026 dbSNP
rs1488156573 2027 dbSNP
rs1260638242 2030 dbSNP
rs1202962118 2031 dbSNP
rs9313157 2032 dbSNP
rs531332238 2033 dbSNP
rs201209651 2034 dbSNP
rs11738488 2035 dbSNP
rs1176023426 2038 dbSNP
rs563537670 2038 dbSNP
rs910632291 2041 dbSNP
rs1356143623 2042 dbSNP
rs112919007 2043 dbSNP
rs986279885 2044 dbSNP
rs955056073 2045 dbSNP
rs1278042460 2047 dbSNP
rs923499644 2049 dbSNP
rs767868298 2051 dbSNP
rs1295028318 2052 dbSNP
rs1237824322 2055 dbSNP
rs956980449 2056 dbSNP
rs1176546181 2061 dbSNP
rs111639695 2063 dbSNP
rs1172442929 2065 dbSNP
rs111489885 2066 dbSNP
rs1000977848 2069 dbSNP
rs1336794338 2071 dbSNP
rs373767212 2072 dbSNP
rs969132321 2073 dbSNP
rs1233697078 2074 dbSNP
rs1023819516 2080 dbSNP
rs865794709 2082 dbSNP
rs527579445 2083 dbSNP
rs1447844743 2086 dbSNP
rs1274312018 2087 dbSNP
rs9918260 2087 dbSNP
rs1339551703 2089 dbSNP
rs1279152043 2090 dbSNP
rs369892828 2092 dbSNP
rs1196470851 2093 dbSNP
rs374343857 2094 dbSNP
rs111813205 2097 dbSNP
rs1192690325 2098 dbSNP
rs878856168 2100 dbSNP
rs1459915068 2102 dbSNP
rs111333472 2104 dbSNP
rs1426431813 2107 dbSNP
rs1465591517 2110 dbSNP
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rs1166226415 2114 dbSNP
rs1477717872 2115 dbSNP
rs9918103 2118 dbSNP
rs1323218775 2120 dbSNP
rs1371633670 2121 dbSNP
rs551379794 2122 dbSNP
rs1190594909 2123 dbSNP
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rs9918259 2125 dbSNP
rs1261958341 2126 dbSNP
rs1259742668 2127 dbSNP
rs532815498 2127 dbSNP
rs1209028666 2128 dbSNP
rs1037668511 2130 dbSNP
rs9918102 2131 dbSNP
rs1275005540 2132 dbSNP
rs201211878 2134 dbSNP
rs1214173790 2135 dbSNP
rs200076085 2136 dbSNP
rs1249456922 2137 dbSNP
rs1050958175 2138 dbSNP
rs1327292411 2141 dbSNP
rs1261885854 2142 dbSNP
rs933441514 2144 dbSNP
rs1438834155 2145 dbSNP
rs1373240612 2146 dbSNP
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rs1465510995 2150 dbSNP
rs1478312865 2151 dbSNP
rs1394952419 2152 dbSNP
rs1163052963 2154 dbSNP
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rs1462794856 2155 dbSNP
rs112313027 2156 dbSNP
rs10070765 2159 dbSNP
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rs1192571233 2160 dbSNP
rs1324260987 2161 dbSNP
rs988302719 2162 dbSNP
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rs1193694589 2166 dbSNP
rs1014217526 2167 dbSNP
rs10070762 2169 dbSNP
rs1437240852 2173 dbSNP
rs957536112 2174 dbSNP
rs935582064 2175 dbSNP
rs1243733720 2176 dbSNP
rs141508412 2180 dbSNP
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rs879004438 2182 dbSNP
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rs879222112 2185 dbSNP
rs1232281065 2186 dbSNP
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rs1304333288 2188 dbSNP
rs11738435 2190 dbSNP
rs75338880 2191 dbSNP
rs181959820 2192 dbSNP
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rs1331402699 2194 dbSNP
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rs112296908 2197 dbSNP
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rs1172636589 2201 dbSNP
rs1417877405 2206 dbSNP
rs1300141674 2207 dbSNP
rs1432538174 2213 dbSNP
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rs1173767124 2216 dbSNP
rs199982075 2218 dbSNP
rs1342101808 2219 dbSNP
rs866216117 2221 dbSNP
rs1469166142 2222 dbSNP
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rs1032257584 2229 dbSNP
rs1241618131 2231 dbSNP
rs960481217 2235 dbSNP
rs1025482730 2236 dbSNP
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rs190765229 2240 dbSNP
rs1237746190 2241 dbSNP
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rs1364510374 2247 dbSNP
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rs572400041 2249 dbSNP
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rs1330449370 2254 dbSNP
rs1006196962 2258 dbSNP
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rs1309322529 2262 dbSNP
rs3762954 2262 dbSNP
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rs554081670 2278 dbSNP
rs746970882 2280 dbSNP
rs1281785191 2283 dbSNP
rs1052513252 2284 dbSNP
rs777395032 2287 dbSNP
rs1432596184 2288 dbSNP
rs771926312 2292 dbSNP
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rs900239509 2301 dbSNP
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rs144852170 2303 dbSNP
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rs1384521913 2307 dbSNP
rs1302807680 2310 dbSNP
rs3762953 2311 dbSNP
rs1224717448 2317 dbSNP
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rs1316512396 2340 dbSNP
rs1200919348 2342 dbSNP
rs1252049202 2344 dbSNP
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rs981391864 2348 dbSNP
rs916227071 2351 dbSNP
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rs990152312 2356 dbSNP
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rs1478649177 2374 dbSNP
rs1170914193 2376 dbSNP
rs1348899307 2383 dbSNP
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rs1220795406 2415 dbSNP
rs955631520 2420 dbSNP
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rs1005936840 2441 dbSNP
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rs567806685 2451 dbSNP
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rs1215248509 2500 dbSNP
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rs1052491921 2514 dbSNP
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rs72707008 2568 dbSNP
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rs955699522 2587 dbSNP
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rs1418232422 2596 dbSNP
rs1239461854 2598 dbSNP
rs972457588 2599 dbSNP
rs962479974 2600 dbSNP
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rs909698912 2603 dbSNP
rs3762951 2604 dbSNP
rs1244025730 2614 dbSNP
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rs1029587826 2616 dbSNP
rs1468054902 2619 dbSNP
rs887518639 2620 dbSNP
rs1026514422 2621 dbSNP
rs1216029973 2628 dbSNP
rs1335931631 2632 dbSNP
rs528979436 2634 dbSNP
rs1272819360 2636 dbSNP
rs1365362874 2637 dbSNP
rs376273637 2642 dbSNP
rs907004811 2643 dbSNP
rs554796808 2645 dbSNP
rs1196531391 2651 dbSNP
rs1274617792 2652 dbSNP
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rs966000643 2664 dbSNP
rs1030989904 2665 dbSNP
rs1369521353 2667 dbSNP
rs11738281 2670 dbSNP
rs1709542 2674 dbSNP
rs1350391068 2678 dbSNP
rs924649165 2682 dbSNP
rs560386155 2683 dbSNP
rs1169528063 2686 dbSNP
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rs934094330 2696 dbSNP
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rs1406691418 2700 dbSNP
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rs1339774135 2705 dbSNP
rs1216528290 2707 dbSNP
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rs1339634039 2719 dbSNP
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rs1287132071 2733 dbSNP
rs1168674436 2735 dbSNP
rs545393768 2736 dbSNP
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rs1012426282 2741 dbSNP
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rs1056748453 2743 dbSNP
rs1251161055 2755 dbSNP
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rs910161355 2759 dbSNP
rs577930156 2761 dbSNP
rs1195568501 2763 dbSNP
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rs1326878653 2773 dbSNP
rs1447026728 2775 dbSNP
rs199674486 2781 dbSNP
rs1036731049 2782 dbSNP
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rs1246017510 2786 dbSNP
rs367832654 2793 dbSNP
rs909635931 2794 dbSNP
rs751656682 2797 dbSNP
rs1203949931 2801 dbSNP
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rs922452113 2808 dbSNP
rs1187297897 2810 dbSNP
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rs547682173 2815 dbSNP
rs1228608768 2816 dbSNP
rs1417784127 2817 dbSNP
rs878948868 2819 dbSNP
rs544633881 2826 dbSNP
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rs1384501116 2832 dbSNP
rs574164726 2833 dbSNP
rs1374102481 2840 dbSNP
rs1022393491 2848 dbSNP
rs1012807310 2853 dbSNP
rs1262951917 2854 dbSNP
rs1442423792 2855 dbSNP
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rs1261716405 2858 dbSNP
rs1368272957 2861 dbSNP
rs1035213021 2867 dbSNP
rs1003787659 2868 dbSNP
rs3749609 2869 dbSNP
rs114148677 2875 dbSNP
rs941044166 2877 dbSNP
rs1364272990 2878 dbSNP
rs1434400510 2880 dbSNP
rs1465515559 2883 dbSNP
rs888163786 2885 dbSNP
rs1049473296 2886 dbSNP
rs1469987513 2886 dbSNP
rs1433823625 2887 dbSNP
rs932421609 2888 dbSNP
rs1330187578 2896 dbSNP
rs1397689270 2905 dbSNP
rs1407930902 2907 dbSNP
rs922433600 2909 dbSNP
rs1481830382 2911 dbSNP
rs976595148 2913 dbSNP
rs934541731 2917 dbSNP
rs1210607440 2924 dbSNP
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rs1204730042 2929 dbSNP
rs1257614361 2929 dbSNP
rs978037530 2930 dbSNP
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rs1039878892 2933 dbSNP
rs202026987 2933 dbSNP
rs1432509097 2934 dbSNP
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rs1431356929 2941 dbSNP
rs1480607749 2943 dbSNP
rs11545597 2950 dbSNP
rs921534338 2966 dbSNP
rs1370943234 2967 dbSNP
rs984737602 2972 dbSNP
rs73730903 2974 dbSNP
rs1221949568 2979 dbSNP
rs1402560821 2980 dbSNP
rs959753396 2989 dbSNP
rs1375430743 2991 dbSNP
rs1035182020 2996 dbSNP
rs1224466053 2998 dbSNP
rs1278011466 2999 dbSNP
rs139958853 3001 dbSNP
rs971100797 3011 dbSNP
rs1373928752 3012 dbSNP
rs897376649 3016 dbSNP
rs1015867513 3018 dbSNP
rs1220368325 3026 dbSNP
rs1270898501 3032 dbSNP
rs1490501720 3036 dbSNP
rs1005606649 3039 dbSNP
rs888106511 3040 dbSNP
rs1417200909 3046 dbSNP
rs569182243 3053 dbSNP
rs1012632873 3064 dbSNP
rs958508986 3065 dbSNP
rs1367970827 3071 dbSNP
rs1406150895 3080 dbSNP
rs1344621725 3086 dbSNP
rs775366378 3088 dbSNP
rs1032848211 3093 dbSNP
rs932417047 3099 dbSNP
rs1156996992 3101 dbSNP
rs3749608 3109 dbSNP
rs1040824692 3119 dbSNP
rs765392447 3132 dbSNP
rs934509120 3133 dbSNP
rs1186914806 3138 dbSNP
rs1255004145 3139 dbSNP
rs749450936 3139 dbSNP
rs1187733218 3140 dbSNP
rs535118455 3142 dbSNP
rs1184884844 3159 dbSNP
rs998211360 3165 dbSNP
rs901246782 3169 dbSNP
rs549387975 3170 dbSNP
rs760485338 3172 dbSNP
rs1039784613 3173 dbSNP
rs1455625036 3182 dbSNP
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rs915235567 3185 dbSNP
rs1483301208 3186 dbSNP
rs383167 3187 dbSNP
rs1213032104 3191 dbSNP
rs1317250338 3192 dbSNP
rs1318699887 3194 dbSNP
rs1223307688 3196 dbSNP
rs1282005274 3198 dbSNP
rs527845420 3199 dbSNP
rs769513723 3205 dbSNP
rs930216577 3212 dbSNP
rs918868700 3215 dbSNP
rs1295361619 3219 dbSNP
rs560531601 3222 dbSNP
rs959403492 3224 dbSNP
rs1035110004 3225 dbSNP
rs1405895421 3228 dbSNP
rs991175245 3231 dbSNP
rs1338881566 3234 dbSNP
rs982246858 3237 dbSNP
rs1361523519 3242 dbSNP
rs1407144311 3244 dbSNP
rs771965575 3244 dbSNP
rs1287228066 3255 dbSNP
rs1455388622 3264 dbSNP
rs961555011 3265 dbSNP
rs1277898735 3266 dbSNP
rs1375418606 3273 dbSNP
rs748011889 3274 dbSNP
rs1224331284 3278 dbSNP
rs1282389386 3279 dbSNP
rs141129975 3280 dbSNP
rs953117715 3281 dbSNP
rs533448453 3286 dbSNP
rs996927148 3287 dbSNP
rs900903268 3288 dbSNP
rs1020233599 3300 dbSNP
rs1420405501 3304 dbSNP
rs747236311 3307 dbSNP
rs1040793622 3310 dbSNP
rs1481898612 3315 dbSNP
rs1178216460 3316 dbSNP
rs998108729 3317 dbSNP
rs1479634407 3327 dbSNP
rs1179073674 3331 dbSNP
rs1430212265 3332 dbSNP
rs998588081 3336 dbSNP
rs1409661400 3337 dbSNP
rs901132179 3344 dbSNP
rs1018303564 3346 dbSNP
rs563228941 3347 dbSNP
rs1443023443 3349 dbSNP
rs1191059204 3356 dbSNP
rs1424102295 3358 dbSNP
rs1006969061 3359 dbSNP
rs72707007 3361 dbSNP
rs13361733 3363 dbSNP
rs1268728244 3371 dbSNP
rs1338319411 3372 dbSNP
rs772241498 3374 dbSNP
rs1212501030 3376 dbSNP
rs947320234 3379 dbSNP
rs915815115 3384 dbSNP
rs562127892 3385 dbSNP
rs1221124918 3392 dbSNP
rs897323944 3395 dbSNP
rs540736774 3403 dbSNP
rs1202015845 3407 dbSNP
rs573025385 3409 dbSNP
rs7722853 3410 dbSNP
rs1421928378 3420 dbSNP
rs76822518 3421 dbSNP
rs1163038394 3425 dbSNP
rs1363604084 3429 dbSNP
rs991143971 3431 dbSNP
rs1384024779 3432 dbSNP
rs557254090 3441 dbSNP
rs937067626 3442 dbSNP
rs925763658 3443 dbSNP
rs374076026 3448 dbSNP
rs961489055 3454 dbSNP
rs181014090 3458 dbSNP
rs1271524709 3477 dbSNP
rs1339698851 3478 dbSNP
rs781755824 3483 dbSNP
rs1244562982 3488 dbSNP
rs1289024573 3492 dbSNP
rs1357910756 3494 dbSNP
rs908708287 3498 dbSNP
rs984699784 3503 dbSNP
rs757606546 3506 dbSNP
rs1446721702 3508 dbSNP
rs779505677 3510 dbSNP
rs1191510069 3514 dbSNP
rs1244018005 3530 dbSNP
rs1450366962 3532 dbSNP
rs1029008055 3541 dbSNP
rs996503323 3545 dbSNP
rs1384192454 3559 dbSNP
rs1398701569 3560 dbSNP
rs964998407 3569 dbSNP
rs1320094274 3578 dbSNP
rs1439417628 3580 dbSNP
rs1326634979 3582 dbSNP
rs1451543764 3583 dbSNP
rs1312276559 3587 dbSNP
rs1020537528 3591 dbSNP
rs1246088186 3597 dbSNP
rs1397324388 3606 dbSNP
rs1285246494 3608 dbSNP
rs1350624335 3615 dbSNP
rs13175137 3621 dbSNP
rs1019270546 3622 dbSNP
rs13175135 3623 dbSNP
rs567735059 3626 dbSNP
rs1286840584 3632 dbSNP
rs546249201 3639 dbSNP
rs13187435 3640 dbSNP
rs1461777949 3642 dbSNP
rs1372171448 3643 dbSNP
rs1241537240 3653 dbSNP
rs879023507 3656 dbSNP
rs879033194 3658 dbSNP
rs534417080 3664 dbSNP
rs570574042 3665 dbSNP
rs1468584736 3668 dbSNP
rs1160074695 3671 dbSNP
rs1161260244 3672 dbSNP
rs1042854923 3674 dbSNP
rs13174980 3675 dbSNP
rs13174971 3676 dbSNP
rs1248169123 3679 dbSNP
rs13160077 3686 dbSNP
rs965319475 3689 dbSNP
rs1237598648 3691 dbSNP
rs1192460729 3694 dbSNP
rs894363129 3695 dbSNP
rs1018272473 3700 dbSNP
rs1223303774 3701 dbSNP
rs1261454574 3702 dbSNP
rs1462857186 3704 dbSNP
rs13174949 3707 dbSNP
rs1249982451 3710 dbSNP
rs1436007388 3711 dbSNP
rs1183823654 3714 dbSNP
rs1269343274 3716 dbSNP
rs1412643687 3718 dbSNP
rs866043742 3720 dbSNP
rs13174941 3721 dbSNP
rs1466273863 3726 dbSNP
rs377298393 3726 dbSNP
rs1230816701 3727 dbSNP
rs13160060 3728 dbSNP
rs1302863056 3729 dbSNP
rs1392630141 3731 dbSNP
rs1232146732 3740 dbSNP
rs138981998 3742 dbSNP
rs1373892934 3743 dbSNP
rs1491315113 3745 dbSNP
rs917307362 3745 dbSNP
rs148811543 3746 dbSNP
rs71967578 3746 dbSNP
rs754212000 3747 dbSNP
rs1281831500 3750 dbSNP
rs1325913539 3751 dbSNP
rs888522317 3753 dbSNP
rs368453824 3761 dbSNP
rs994663451 3763 dbSNP
rs1197658433 3767 dbSNP
rs1252393532 3770 dbSNP
rs1490176660 3771 dbSNP
rs897298860 3774 dbSNP
rs1270851172 3775 dbSNP
rs868571210 3778 dbSNP
rs1315602901 3779 dbSNP
rs1433402658 3779 dbSNP
rs1169226505 3780 dbSNP
rs1370997694 3782 dbSNP
rs70955279 3784 dbSNP
rs745867237 3784 dbSNP
rs927943318 3784 dbSNP
rs67534723 3785 dbSNP
rs13187115 3790 dbSNP
rs1689678 3791 dbSNP
rs750840990 3793 dbSNP
rs1431319523 3795 dbSNP
rs1301675538 3797 dbSNP
rs1347705503 3797 dbSNP
rs1689677 3798 dbSNP
rs1046472074 3799 dbSNP
rs1172528994 3800 dbSNP
rs1229659106 3801 dbSNP
rs1451976069 3801 dbSNP
rs1358623138 3802 dbSNP
rs13159893 3814 dbSNP
rs908629426 3815 dbSNP
rs1379327101 3818 dbSNP
rs984279226 3819 dbSNP
rs1199400622 3820 dbSNP
rs1437028766 3823 dbSNP
rs1248226237 3825 dbSNP
rs13159892 3825 dbSNP
rs13159889 3826 dbSNP
rs13174791 3833 dbSNP
rs1422222516 3836 dbSNP
rs182297815 3839 dbSNP
rs1162164126 3842 dbSNP
rs533601365 3847 dbSNP
rs569421597 3849 dbSNP
rs13187083 3850 dbSNP
rs147121191 3851 dbSNP
rs1383038767 3856 dbSNP
rs1437615988 3866 dbSNP
rs1298415168 3867 dbSNP
rs1279855584 3868 dbSNP
rs368912260 3871 dbSNP
rs796605089 3871 dbSNP
rs1317013568 3872 dbSNP
rs1322298639 3874 dbSNP
rs921469106 3876 dbSNP
rs1258806381 3879 dbSNP
rs975625114 3880 dbSNP
rs1275968125 3882 dbSNP
rs1208888992 3883 dbSNP
rs13182290 3884 dbSNP
rs13174660 3885 dbSNP
rs1323079784 3890 dbSNP
rs879116200 3895 dbSNP
rs879189929 3896 dbSNP
rs78071519 3901 dbSNP
rs1424953193 3903 dbSNP
rs1370806406 3907 dbSNP
rs79328056 3909 dbSNP
rs1459162767 3917 dbSNP
rs965631232 3919 dbSNP
rs1405656468 3920 dbSNP
rs559761727 3924 dbSNP
rs1304711607 3938 dbSNP
rs895425643 3946 dbSNP
rs1223214288 3949 dbSNP
rs1304787341 3958 dbSNP
rs1432328669 3959 dbSNP
rs1330872603 3977 dbSNP
rs1403643730 3977 dbSNP
rs758580867 3978 dbSNP
rs752990512 3982 dbSNP
rs1469626027 3983 dbSNP
rs937055088 3990 dbSNP
rs145425682 3995 dbSNP
rs181084491 3996 dbSNP
rs1042771399 3999 dbSNP
rs878866380 4002 dbSNP
rs1472767931 4005 dbSNP
rs1160413417 4016 dbSNP
rs1428833895 4018 dbSNP
rs894281655 4028 dbSNP
rs913059113 4030 dbSNP
rs976607404 4031 dbSNP
rs75562230 4045 dbSNP
rs1296328127 4046 dbSNP
rs1444215136 4055 dbSNP
rs1352285907 4060 dbSNP
rs911177851 4066 dbSNP
rs1002789093 4070 dbSNP
rs1279503416 4071 dbSNP
rs907122288 4073 dbSNP
rs1320960148 4085 dbSNP
rs1204599441 4090 dbSNP
rs1278899513 4093 dbSNP
rs1349219477 4094 dbSNP
rs765213870 4108 dbSNP
rs1201853004 4110 dbSNP
rs1231632499 4117 dbSNP
rs1484346250 4125 dbSNP
rs149302808 4127 dbSNP
rs952705353 4130 dbSNP
rs1027418868 4131 dbSNP
rs1174476419 4137 dbSNP
rs940017748 4143 dbSNP
rs961789567 4144 dbSNP
rs1025079765 4145 dbSNP
rs1292306100 4153 dbSNP
rs866190518 4154 dbSNP
rs545661397 4161 dbSNP
rs1341890850 4167 dbSNP
rs895393030 4168 dbSNP
rs1334292522 4170 dbSNP
rs767501294 4171 dbSNP
rs55996736 4177 dbSNP
rs1043147183 4182 dbSNP
rs1161235575 4183 dbSNP
rs1206411706 4188 dbSNP
rs921426503 4189 dbSNP
rs913026461 4200 dbSNP
rs1040892554 4209 dbSNP
rs1247474224 4210 dbSNP
rs1475234693 4222 dbSNP
rs1184846450 4226 dbSNP
rs975589092 4229 dbSNP
rs1392178602 4235 dbSNP
rs556941605 4236 dbSNP
rs1450176619 4241 dbSNP
rs944252942 4242 dbSNP
rs1363664086 4243 dbSNP
rs1406839178 4261 dbSNP
rs912821029 4263 dbSNP
rs911061386 4265 dbSNP
rs977025151 4269 dbSNP
rs1344216000 4277 dbSNP
rs774244200 4280 dbSNP
rs1238246269 4286 dbSNP
rs748869959 4288 dbSNP
rs750036788 4291 dbSNP
rs985371182 4299 dbSNP
rs967465174 4303 dbSNP
rs1209841804 4304 dbSNP
rs952752036 4312 dbSNP
rs1291105853 4314 dbSNP
rs1446638213 4314 dbSNP
rs1334749646 4316 dbSNP
rs1021313530 4322 dbSNP
rs1206990843 4325 dbSNP
rs1250154835 4328 dbSNP
rs775246698 4329 dbSNP
rs958521777 4332 dbSNP
rs1366616370 4339 dbSNP
rs541730652 4340 dbSNP
rs574049151 4343 dbSNP
rs1163609931 4345 dbSNP
rs961438662 4363 dbSNP
rs1358093219 4364 dbSNP
rs1398751699 4377 dbSNP
rs1025048031 4380 dbSNP
rs1388957647 4381 dbSNP
rs1451236937 4392 dbSNP
rs1334173730 4395 dbSNP
rs1339210829 4401 dbSNP
rs1013630215 4404 dbSNP
rs138625383 4410 dbSNP
rs7434 4413 dbSNP
rs570430664 4416 dbSNP
rs1014869773 4417 dbSNP
rs1004828234 4420 dbSNP
rs1465547459 4421 dbSNP
rs887096656 4422 dbSNP
rs1254238258 4425 dbSNP
rs575002667 4435 dbSNP
rs1393597942 4439 dbSNP
rs7433 4441 dbSNP
rs1471464045 4443 dbSNP
rs931383200 4444 dbSNP
rs899914688 4445 dbSNP
rs1039811459 4448 dbSNP
rs1412220432 4449 dbSNP
rs1406827444 4452 dbSNP
rs1469017888 4454 dbSNP
rs944221938 4462 dbSNP
rs1167484052 4468 dbSNP
rs912790526 4472 dbSNP
rs977624196 4473 dbSNP
rs1335722692 4474 dbSNP
rs370132458 4475 dbSNP
rs889596159 4480 dbSNP
rs1468460908 4481 dbSNP
rs1050053331 4483 dbSNP
rs931227287 4495 dbSNP
rs919876230 4496 dbSNP
rs189156650 4502 dbSNP
rs1201137578 4505 dbSNP
rs184395498 4507 dbSNP
rs551246756 4508 dbSNP
rs192091107 4509 dbSNP
rs377736095 4510 dbSNP
rs959459179 4518 dbSNP
rs571886828 4519 dbSNP
rs1299222001 4526 dbSNP
rs11194 4527 dbSNP
rs1466071402 4528 dbSNP
rs1228464017 4529 dbSNP
rs58720042 4529 dbSNP
rs980050974 4530 dbSNP
rs1428447598 4532 dbSNP
rs568809359 4535 dbSNP
rs981250068 4541 dbSNP
rs1370187319 4547 dbSNP
rs971202878 4548 dbSNP
rs1009826003 4551 dbSNP
rs891445539 4555 dbSNP
rs1014796745 4560 dbSNP
rs1339963076 4562 dbSNP
rs1438347148 4562 dbSNP
rs1207125217 4563 dbSNP
rs1350189595 4565 dbSNP
rs1275285813 4567 dbSNP
rs1327921300 4567 dbSNP
rs1005202447 4569 dbSNP
rs1428132674 4571 dbSNP
rs1019304082 4572 dbSNP
rs952038602 4574 dbSNP
rs1433461349 4583 dbSNP
rs1191831297 4595 dbSNP
rs150168973 4598 dbSNP
rs1453823125 4606 dbSNP
rs747546949 4607 dbSNP
rs899897113 4620 dbSNP
rs1193362590 4621 dbSNP
rs1039780318 4624 dbSNP
rs1478569273 4628 dbSNP
rs1393126295 4632 dbSNP
rs751052596 4637 dbSNP
rs889563425 4650 dbSNP
rs891280233 4654 dbSNP
rs1363054175 4658 dbSNP
rs778066126 4659 dbSNP
rs1049579105 4664 dbSNP
rs946288638 4677 dbSNP
rs1358695926 4681 dbSNP
rs189159141 4685 dbSNP
rs564398819 4686 dbSNP
rs61550717 4695 dbSNP
rs185536470 4697 dbSNP
rs1054501706 4701 dbSNP
rs937042062 4708 dbSNP
rs926971171 4716 dbSNP
rs752834667 4725 dbSNP
rs7558 4726 dbSNP
rs1205291119 4728 dbSNP
rs907709617 4736 dbSNP
rs983304446 4740 dbSNP
rs952020165 4748 dbSNP
rs1037314975 4749 dbSNP
rs1391299245 4749 dbSNP
rs1423799723 4762 dbSNP
rs1163113760 4763 dbSNP
rs1370492250 4770 dbSNP
rs1458744657 4770 dbSNP
rs1299117139 4772 dbSNP
rs1320088901 4775 dbSNP
rs939958006 4778 dbSNP
rs1220929437 4779 dbSNP
rs1386772131 4787 dbSNP
rs1368207223 4791 dbSNP
rs1321362911 4794 dbSNP
rs1278777007 4796 dbSNP
rs1226603230 4813 dbSNP
rs1027583562 4819 dbSNP
rs995888440 4822 dbSNP
rs963993597 4823 dbSNP
rs1265813889 4829 dbSNP
rs1018257634 4831 dbSNP
rs1008257558 4833 dbSNP
rs891249217 4839 dbSNP
rs1242057346 4844 dbSNP
rs938096121 4849 dbSNP
rs1042244238 4852 dbSNP
rs1415611842 4854 dbSNP
rs1424724726 4854 dbSNP
rs1010418123 4860 dbSNP
rs1407863702 4862 dbSNP
rs1158949101 4863 dbSNP
rs1180498576 4870 dbSNP
rs60826175 4873 dbSNP
rs563145993 4874 dbSNP
rs1253524002 4875 dbSNP
rs67769313 4875 dbSNP
rs1304474337 4876 dbSNP
rs1379855689 4876 dbSNP
rs979550770 4876 dbSNP
rs1314910870 4877 dbSNP
rs1485132413 4879 dbSNP
rs1286290076 4887 dbSNP
rs1253806426 4888 dbSNP
rs1211575673 4892 dbSNP
rs1312753339 4894 dbSNP
rs1283415341 4895 dbSNP
rs1277489808 4896 dbSNP
rs1226379753 4897 dbSNP
rs1211661078 4898 dbSNP
rs1305951356 4898 dbSNP
rs150752289 4898 dbSNP
rs34439131 4898 dbSNP
rs371299069 4898 dbSNP
rs56041816 4898 dbSNP
rs66934906 4898 dbSNP
rs759897411 4898 dbSNP
rs1491107685 4900 dbSNP
rs1491440982 4901 dbSNP
rs1429102647 4904 dbSNP
rs1054696311 4905 dbSNP
rs1410229783 4906 dbSNP
rs1273842008 4929 dbSNP
rs937607225 4940 dbSNP
rs1289238432 4949 dbSNP
rs755165290 4961 dbSNP
rs1414462207 4962 dbSNP
rs926940444 4966 dbSNP
rs541669710 4967 dbSNP
rs1466570225 4968 dbSNP
rs1206362991 4973 dbSNP
rs1246319830 4979 dbSNP
rs574382413 4980 dbSNP
rs1192986413 4982 dbSNP
rs1425876175 4984 dbSNP
rs1448948231 4986 dbSNP
rs202172698 4990 dbSNP
rs1345148030 4992 dbSNP
rs1157497432 4998 dbSNP
rs1372361030 5006 dbSNP
rs1430135090 5011 dbSNP
rs1459165175 5017 dbSNP
rs1347747275 5018 dbSNP
rs966312088 5021 dbSNP
rs1164653706 5027 dbSNP
rs552875914 5028 dbSNP
rs572186718 5035 dbSNP
rs140910062 5036 dbSNP
rs576787211 5037 dbSNP
rs983658977 5038 dbSNP
rs192790612 5039 dbSNP
rs553709928 5042 dbSNP
rs147666399 5043 dbSNP
rs569695853 5046 dbSNP
rs141633446 5047 dbSNP
rs187452189 5048 dbSNP
rs955429294 5049 dbSNP
rs1391927433 5052 dbSNP
rs1020387386 5055 dbSNP
rs1320163252 5056 dbSNP
rs1409050343 5058 dbSNP
rs1450075722 5062 dbSNP
rs1010761371 5071 dbSNP
rs1411277985 5073 dbSNP
rs1406891651 5090 dbSNP
rs1323754611 5093 dbSNP
rs1387495178 5096 dbSNP
rs1396678845 5097 dbSNP
rs1432235074 5102 dbSNP
rs1322037893 5106 dbSNP
rs1361285642 5111 dbSNP
rs1056385741 5114 dbSNP
rs1432024120 5119 dbSNP
rs1284136051 5127 dbSNP
rs893293170 5128 dbSNP
rs1033631735 5138 dbSNP
rs1001785863 5139 dbSNP
rs1274006681 5150 dbSNP
rs568750308 5151 dbSNP
rs1250058325 5152 dbSNP
rs775335620 5153 dbSNP
rs1045389119 5155 dbSNP
rs765036599 5166 dbSNP
rs1044178099 5185 dbSNP
rs114429348 5186 dbSNP
rs914044525 5193 dbSNP
rs1410750408 5195 dbSNP
rs1047453834 5198 dbSNP
rs966280838 5201 dbSNP
rs930416170 5203 dbSNP
rs1423904465 5204 dbSNP
rs1339263961 5207 dbSNP
rs920431948 5208 dbSNP
rs975020866 5210 dbSNP
rs1294356102 5225 dbSNP
rs986388225 5239 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgguucccuuaccguCCCUUUa 5'
                         | | || 
Target 5' uauauauauauauauGUGCAAu 3'
 		20 - 41
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Disease 11076.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "HITS-CLIP data was present in GSM714642. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 11076.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgguucccuuaccguCCCUUUa 5'
                         | | || 
Target 5' uauauauauauauauGUGCAAu 3'
 		20 - 41
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
Experimental Support 4 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM714642
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000360578.5 | 3UTR | AAACAAAUUUAUAUAUAUAUAUAUAUAUAUAUAUGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000360578.5 | 3UTR | AAAGGGAAACAAAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000360578.5 | 3UTR | AAACAAAUUUAUAUAUAUAUAUAUAUAUAUAUAUGUGCAAUAUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000360578.5 | 3UTR | AAACAAAUUUAUAUAUAUAUAUAUAUAUAUAUAUGUGCAAUAUAUUUUUACACUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000360578.5 | 3UTR | AAACAAAUUUAUAUAUAUAUAUAUAUAUAUAUAUGUGCAAUAUAUUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
223 hsa-miR-4446-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078060 PCTP phosphatidylcholine transfer protein 2 2
MIRT099072 FOXC1 forkhead box C1 2 2
MIRT130186 TXNIP thioredoxin interacting protein 2 2
MIRT148786 NARS asparaginyl-tRNA synthetase 2 2
MIRT261965 SEPHS1 selenophosphate synthetase 1 2 2
MIRT345867 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT409087 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT451883 SOD2 superoxide dismutase 2 2 4
MIRT469236 RHOB ras homolog family member B 2 2
MIRT469435 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT483055 FOXB1 forkhead box B1 2 8
MIRT484640 TBC1D5 TBC1 domain family member 5 2 6
MIRT493106 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT497307 TMEFF2 transmembrane protein with EGF like and two follistatin like domains 2 2 2
MIRT497798 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT501273 SCARB2 scavenger receptor class B member 2 2 4
MIRT506756 KMT2D lysine methyltransferase 2D 2 2
MIRT511986 EEF2 eukaryotic translation elongation factor 2 2 4
MIRT513126 ZNF431 zinc finger protein 431 2 2
MIRT519733 ZNF394 zinc finger protein 394 2 4
MIRT520351 UBE2K ubiquitin conjugating enzyme E2 K 2 4
MIRT520542 TPPP tubulin polymerization promoting protein 2 8
MIRT530782 HDHD2 haloacid dehalogenase like hydrolase domain containing 2 2 2
MIRT531112 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT532144 GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 2 2
MIRT533208 WAPAL WAPL cohesin release factor 2 2
MIRT533419 TWF1 twinfilin actin binding protein 1 2 2
MIRT534063 SRSF10 serine and arginine rich splicing factor 10 2 2
MIRT534288 SLAIN2 SLAIN motif family member 2 2 2
MIRT537796 EFNB2 ephrin B2 2 2
MIRT538017 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT538058 DMD dystrophin 2 2
MIRT538132 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT538680 CCDC80 coiled-coil domain containing 80 2 2
MIRT538788 C3orf52 chromosome 3 open reading frame 52 2 2
MIRT542762 PPAP2B phospholipid phosphatase 3 2 2
MIRT546861 RAB10 RAB10, member RAS oncogene family 2 4
MIRT547418 MED4 mediator complex subunit 4 2 4
MIRT551633 TRUB1 TruB pseudouridine synthase family member 1 2 4
MIRT552329 ZNF704 zinc finger protein 704