pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol TMEM41B   
Synonyms -
Description transmembrane protein 41B
Transcript NM_015012   
Other Transcripts NM_001165030   
Expression
Putative miRNA Targets on TMEM41B
3'UTR of TMEM41B
(miRNA target sites are highlighted)
>TMEM41B|NM_015012|3'UTR
   1 AAATAATCATCTGATTTTTAGTTTTGCTGTCATCACCATCTCAGGATTAACAGGTGCATCCATTTATGTTTTAAAATCAC
  81 CTCTTCAGTAATTAAACAAGGAATTTGTAAAATAAAATTTCCTATCAGATAGTTAAAGTAATACATTTAAGTGACAAGGG
 161 GAGAAGAAAGTAAAAATGGAAATTGGTATACTGTGAAAAGTGCTATCAATAGTTAAGGTAGACATCTTAGACATCTTATA
 241 AATTATTATACCAAGGGTAGCTGTAGATAATAGTAGTGTGGTAGGAAATTGTTGATCCAGCTAATTCATTCAATTTAATT
 321 GAATATTTTTTATCTTTAATAACTAAAATAGATATTTTTAAATTCTAGATTTTTTAAAGTAGTGTTGCAGGTTTTGTTAA
 401 TGTTAGGCTTTTTTCAGAGCATAAACTGGAAAACTTAAAAAGAGATTTACATTTTCTTCCTCTTTTTTTTTTTTTTTTTT
 481 TTTCTGTTTTGAGACGGAGTCTAGCTCTGCCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCCACTCACTGCAAGCTCCAC
 561 CTCCTGGGTTCACGCCATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCAGCTAAT
 641 TTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCTGCCCG
 721 CCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCCATTTTCTTCCTCTTTTGAGGTAATGGA
 801 TTTGTTTGGAGATGGCATGTTAGTAGACGACTGAATATGGAAAGGATATCAAGTTATCTATTTTGTTAATTTTATTTTTG
 881 TTTTTTATCATCTAGATTTTTATCATGGATTAGTCTGAAATTTAAAGTTCTGGCCAGTCGGTTTTCTTTCATCTTGTAGT
 961 TTTTACAGTATTTCCACTGTGCATATGCAAAATGGGTATTACATAACTGTATCATATTTGGTATTGATAATTTTTTTTTT
1041 TTTTGAGACGGAGTCTTGCTGTTGCCCAGGCTGGAGTGGAGTGCGTGGTGTGATCTCGGCTCACTGCAAACTCCGCCTCC
1121 TGGGTTCAAGCGATTCTCCTGGCCCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCACCGTGCCCAGCTAATTTTT
1201 GTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGGCTGGTCTTGAACTCCTGACCTCAGGCTATATGCCCACTTC
1281 CACCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCAGCCTGGTATTGATAATTTATATTCAGATAATTTGT
1361 TATGGCTCTTTAATATCCCACAAGGGGCTCTAAAAAGCAAACATTCAAGAGTATGTAGTTTTTAGACATTAAGTTAATTA
1441 TTTTAAACAGTGACAGCAAAACACAAGTGATTAAATATAGTTTATTTGTTCCAATGACTAAATTTTACCTCATTTATTAA
1521 TCTGGTCATTAAGGAATATATTTAATAATATTATGTAATTATTCTTTTTATGCATGATACACCTAGAAAAATGCCTTTTG
1601 TTTCTATTGATGGCTTTGTTGTTTGGAGCTACTTTTGATTACTTATTGCAGTTTCCCAATTTAGTCTTTACTTTATCTAA
1681 CTCACAAAGTAAAATTAACTGATCACATGGCAACTACTGTATTTAAATAGTTCTGGAAAAATGAAAGTGCTTTTTGCTGC
1761 TTGGTAAATGGGTAATGCCCTTGATTCCTTGACTGTAGGACATAGCTGATCTAAAGTACTCTGTCAGTTTTACCTTCACC
1841 CATGACTGTTATTAGTTGTCAAAGTTGAAAAGTACTTTAGCTGTGAGAAATCCTTGTATGTTTTTATTATAAGAGGTATA
1921 ATCATCCTCAAAGCCTGTTTTTATTACATGATGTGGACTGATTATTTTTTCTATCACAGTGTTAACAGATGGATTTTATT
2001 GTAAATACAAAGAAAACATATTGATTATTGTAGTATTCTTATGTCACCTGGCCTTTTGCGTGAGATTATTTATTATTTCT
2081 AGCAAGGCTTTCTTCCTTTCTTATTGCCCAGAGACTGACTGATACATCTTTTGTTATTTTTACACATAAATTAAACATAG
2161 CCTTTTTGGACAAATTCACTAAATATTAATGTATAAAATGTAATTGAGTAAATTTTTATCAGAATTTTAAAAATAAAAGA
2241 GCTTAGACTCAGTAGAACTCAGTAGAAGCTTCACTATTTACTCCAGCGTGTGTAAATTGTACTTACTCTATTCTCAGAGT
2321 ATATTTACTGTCCTTACCATTGATTCTTTCCCTTTGCTAATTTTTTTTTTTGTTAATGGTAGCTGCGACTTTAGGTGGGG
2401 TATATTTTCTTCTCCTAAGAGAATAGACAGTTTTTCCAGATTCATCATCATTGACTGTCAAGAAAGGACCCTTCAGCAAG
2481 GCTGTACCCTCAATGCAGTTGATGGCCTGTCTTCACGGATTTACAGACTTGGCCTGATGCCCATGTAAATTCAAGCTTTG
2561 GCTTGTGGTAACAACCACAAGAAGACAAGCATCTGTGGTGCGGAGGCAAGCAGGCTAACTAGGAGTTGACAAGCTAAGAA
2641 AGTGAAACTGTTCTTTCTTAGTTAACTGTCTTTCTCTGGAGCTCTGTTATTTTGAGTATAATATTTCCATGACACTTAGT
2721 AAATGCAAGCTAAAATGTAATAATAATAAATTGTATTGGAGAAACCTAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            | ||  || || ||||||| 
Target 5' tcACTGCAAGCTC-CACCTCCt 3'
545 - 565 155.00 -14.60
2
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     |: ||||||| 
Target 5' tatatgcccacTTCCACCTCCc 3'
1267 - 1288 143.00 -15.60
3
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            | ||  |  || |:||||| 
Target 5' tcACTGCAAACTC-CGCCTCCt 3'
1101 - 1121 131.00 -12.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30486409 4 COSMIC
COSN31544513 56 COSMIC
COSN15662599 126 COSMIC
COSN31606941 176 COSMIC
COSN23411449 205 COSMIC
COSN29619046 272 COSMIC
COSN18999651 482 COSMIC
COSN15660694 953 COSMIC
COSN29994373 1398 COSMIC
COSN8879040 1730 COSMIC
COSN25318981 1777 COSMIC
COSN19384701 2284 COSMIC
COSN20962999 2339 COSMIC
COSN27369519 2361 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1401649551 1 dbSNP
rs995146570 8 dbSNP
rs1157027456 9 dbSNP
rs201692217 15 dbSNP
rs1269648538 20 dbSNP
rs1478843499 21 dbSNP
rs758340641 27 dbSNP
rs201650094 28 dbSNP
rs1377812224 30 dbSNP
rs1136330 32 dbSNP
rs756916177 33 dbSNP
rs753476492 34 dbSNP
rs767923058 36 dbSNP
rs372712487 39 dbSNP
rs775857968 42 dbSNP
rs774871685 44 dbSNP
rs1222375863 45 dbSNP
rs1343175060 48 dbSNP
rs1300574409 49 dbSNP
rs944500775 74 dbSNP
rs911647549 83 dbSNP
rs1050137361 91 dbSNP
rs1184869167 92 dbSNP
rs770249287 97 dbSNP
rs931700160 103 dbSNP
rs1414072663 106 dbSNP
rs1474293845 107 dbSNP
rs1164259515 113 dbSNP
rs1391759011 114 dbSNP
rs373362401 124 dbSNP
rs914888673 126 dbSNP
rs552282132 129 dbSNP
rs1288402142 135 dbSNP
rs1466596788 136 dbSNP
rs1354092030 138 dbSNP
rs957842698 141 dbSNP
rs1292093298 142 dbSNP
rs1356629556 144 dbSNP
rs1361178304 144 dbSNP
rs981842981 155 dbSNP
rs1437073104 160 dbSNP
rs1434264817 166 dbSNP
rs924835525 167 dbSNP
rs970814455 170 dbSNP
rs187820815 175 dbSNP
rs1451289000 179 dbSNP
rs1009171194 182 dbSNP
rs570270885 183 dbSNP
rs183148789 190 dbSNP
rs1473903074 195 dbSNP
rs1007357086 209 dbSNP
rs888910273 212 dbSNP
rs1419061609 219 dbSNP
rs1430856176 220 dbSNP
rs1310207005 227 dbSNP
rs1024349403 237 dbSNP
rs1332935312 239 dbSNP
rs994077947 239 dbSNP
rs1340623959 245 dbSNP
rs958759442 247 dbSNP
rs1268098227 250 dbSNP
rs1338305467 255 dbSNP
rs1257465614 258 dbSNP
rs1028057658 261 dbSNP
rs530369915 262 dbSNP
rs7939704 269 dbSNP
rs1345663056 271 dbSNP
rs1209993313 272 dbSNP
rs190518351 273 dbSNP
rs897765570 278 dbSNP
rs1191085794 291 dbSNP
rs901240813 296 dbSNP
rs1037058117 297 dbSNP
rs1450282252 306 dbSNP
rs1170901097 312 dbSNP
rs527316588 312 dbSNP
rs1306317322 313 dbSNP
rs1295481174 319 dbSNP
rs939999939 323 dbSNP
rs576120899 332 dbSNP
rs890286529 332 dbSNP
rs910167818 339 dbSNP
rs1396743288 347 dbSNP
rs564971851 352 dbSNP
rs1301107308 360 dbSNP
rs1435288665 362 dbSNP
rs1299554621 364 dbSNP
rs1414421623 367 dbSNP
rs1345556240 376 dbSNP
rs561809668 384 dbSNP
rs1256570700 387 dbSNP
rs1347001518 391 dbSNP
rs1203503452 397 dbSNP
rs1283590059 400 dbSNP
rs545131842 402 dbSNP
rs1190824413 406 dbSNP
rs926785643 407 dbSNP
rs1251361140 415 dbSNP
rs1454146697 415 dbSNP
rs1199988172 420 dbSNP
rs576067605 441 dbSNP
rs1379908674 442 dbSNP
rs914940177 442 dbSNP
rs1053875061 446 dbSNP
rs1431381249 446 dbSNP
rs1371327166 450 dbSNP
rs1169654475 451 dbSNP
rs970528061 453 dbSNP
rs1424258330 456 dbSNP
rs1257681621 459 dbSNP
rs934972911 460 dbSNP
rs1485161078 461 dbSNP
rs1252055752 462 dbSNP
rs1207810311 463 dbSNP
rs1368311194 463 dbSNP
rs1479860543 464 dbSNP
rs1251042399 465 dbSNP
rs913640353 473 dbSNP
rs7935885 475 dbSNP
rs1323981086 476 dbSNP
rs1291550747 481 dbSNP
rs957668476 482 dbSNP
rs1032224355 483 dbSNP
rs1160704029 484 dbSNP
rs1210645676 484 dbSNP
rs1210829231 484 dbSNP
rs1237455113 484 dbSNP
rs1269839306 484 dbSNP
rs1271550084 484 dbSNP
rs1377001281 484 dbSNP
rs1444761894 484 dbSNP
rs1468169100 484 dbSNP
rs544791396 484 dbSNP
rs56313114 484 dbSNP
rs796591716 484 dbSNP
rs1351392357 485 dbSNP
rs1028903741 486 dbSNP
rs1293912550 486 dbSNP
rs1310074989 487 dbSNP
rs1287700525 490 dbSNP
rs1392992901 491 dbSNP
rs556275149 495 dbSNP
rs542480390 496 dbSNP
rs1007409408 503 dbSNP
rs953346421 505 dbSNP
rs1162228868 510 dbSNP
rs1474586424 511 dbSNP
rs188495113 512 dbSNP
rs1183904283 517 dbSNP
rs1435656766 521 dbSNP
rs1250285909 523 dbSNP
rs1165113032 527 dbSNP
rs1210768778 528 dbSNP
rs1460310039 531 dbSNP
rs553685585 533 dbSNP
rs1371108003 535 dbSNP
rs1411517074 536 dbSNP
rs534677467 542 dbSNP
rs4384389 543 dbSNP
rs4343026 548 dbSNP
rs1275736143 550 dbSNP
rs1344953122 551 dbSNP
rs1027717562 552 dbSNP
rs1290223538 554 dbSNP
rs1482670588 556 dbSNP
rs1237176396 559 dbSNP
rs1257872532 562 dbSNP
rs1426315099 564 dbSNP
rs534917862 565 dbSNP
rs1004221140 573 dbSNP
rs1387112269 574 dbSNP
rs539081330 586 dbSNP
rs1323801026 587 dbSNP
rs962006066 589 dbSNP
rs1014884321 590 dbSNP
rs1048694666 597 dbSNP
rs1008815891 604 dbSNP
rs566023987 609 dbSNP
rs926851390 613 dbSNP
rs1046602710 617 dbSNP
rs374858183 618 dbSNP
rs1232520303 621 dbSNP
rs913660093 621 dbSNP
rs1480545070 622 dbSNP
rs1435267026 628 dbSNP
rs371398557 629 dbSNP
rs957720405 631 dbSNP
rs367643924 634 dbSNP
rs935003869 639 dbSNP
rs902178585 640 dbSNP
rs924921955 641 dbSNP
rs1424416876 642 dbSNP
rs1041978201 645 dbSNP
rs1178342297 647 dbSNP
rs1343440663 647 dbSNP
rs950292349 648 dbSNP
rs1321538347 649 dbSNP
rs1391064170 652 dbSNP
rs370155394 655 dbSNP
rs1274579062 657 dbSNP
rs1368933022 662 dbSNP
rs570054645 663 dbSNP
rs550318933 664 dbSNP
rs1326529594 665 dbSNP
rs997393169 667 dbSNP
rs1465946715 672 dbSNP
rs532177919 674 dbSNP
rs563349683 675 dbSNP
rs548135309 677 dbSNP
rs1004274982 678 dbSNP
rs1478318999 679 dbSNP
rs527272010 680 dbSNP
rs1159949552 681 dbSNP
rs1414495224 682 dbSNP
rs1027012637 683 dbSNP
rs1002614813 684 dbSNP
rs375643133 686 dbSNP
rs183170496 687 dbSNP
rs562461026 688 dbSNP
rs1452025249 689 dbSNP
rs530198340 690 dbSNP
rs892612614 691 dbSNP
rs1482658825 692 dbSNP
rs1183003246 694 dbSNP
rs375943143 695 dbSNP
rs1436127064 697 dbSNP
rs936452360 700 dbSNP
rs940137976 702 dbSNP
rs191407160 706 dbSNP
rs1308114757 709 dbSNP
rs1351871632 710 dbSNP
rs1193348124 715 dbSNP
rs1450676792 716 dbSNP
rs1250418664 717 dbSNP
rs769738151 719 dbSNP
rs541315711 720 dbSNP
rs1205863216 722 dbSNP
rs999226969 724 dbSNP
rs1202409203 725 dbSNP
rs902219486 734 dbSNP
rs931631851 736 dbSNP
rs1473872034 739 dbSNP
rs1277961223 740 dbSNP
rs1233255598 741 dbSNP
rs1187086155 743 dbSNP
rs560012573 746 dbSNP
rs540176034 747 dbSNP
rs923218554 752 dbSNP
rs4243947 753 dbSNP
rs1340710509 757 dbSNP
rs1454186848 761 dbSNP
rs1294939901 762 dbSNP
rs1325356425 763 dbSNP
rs558863892 764 dbSNP
rs375055165 765 dbSNP
rs372087881 768 dbSNP
rs984606459 771 dbSNP
rs754869988 772 dbSNP
rs1186982859 773 dbSNP
rs937540977 783 dbSNP
rs920771056 797 dbSNP
rs1190874698 799 dbSNP
rs753801230 804 dbSNP
rs35807453 814 dbSNP
rs973508079 814 dbSNP
rs1477954313 817 dbSNP
rs1171489450 819 dbSNP
rs1027066439 821 dbSNP
rs1002219842 828 dbSNP
rs1422350602 829 dbSNP
rs1318184985 837 dbSNP
rs907929436 838 dbSNP
rs905153191 840 dbSNP
rs987486557 849 dbSNP
rs4369406 851 dbSNP
rs1297393721 856 dbSNP
rs1475339490 857 dbSNP
rs1329290253 859 dbSNP
rs1369150545 862 dbSNP
rs1014227466 864 dbSNP
rs4620719 872 dbSNP
rs892706955 876 dbSNP
rs1275369685 880 dbSNP
rs1347289319 882 dbSNP
rs370851816 889 dbSNP
rs1267786177 890 dbSNP
rs1465482792 902 dbSNP
rs1052574750 908 dbSNP
rs1265624082 922 dbSNP
rs761886908 925 dbSNP
rs936838237 930 dbSNP
rs903646960 931 dbSNP
rs374927499 934 dbSNP
rs576446195 939 dbSNP
rs1050564046 940 dbSNP
rs931667258 954 dbSNP
rs556413581 956 dbSNP
rs1013213761 957 dbSNP
rs976037207 962 dbSNP
rs940630555 967 dbSNP
rs907793024 983 dbSNP
rs1347293064 996 dbSNP
rs1226687436 1003 dbSNP
rs1287739654 1007 dbSNP
rs1056489280 1011 dbSNP
rs1001776379 1013 dbSNP
rs1353236604 1014 dbSNP
rs1263885329 1015 dbSNP
rs899358212 1017 dbSNP
rs1037886972 1024 dbSNP
rs1311888621 1044 dbSNP
rs1179411760 1045 dbSNP
rs1270133114 1045 dbSNP
rs201433664 1045 dbSNP
rs1409982039 1050 dbSNP
rs770573156 1052 dbSNP
rs1481462204 1053 dbSNP
rs1327210349 1054 dbSNP
rs1366334530 1057 dbSNP
rs565278482 1060 dbSNP
rs1163584438 1061 dbSNP
rs1415117844 1065 dbSNP
rs1407845690 1066 dbSNP
rs1167252720 1069 dbSNP
rs984658464 1074 dbSNP
rs940814240 1075 dbSNP
rs1183169932 1078 dbSNP
rs1310897583 1082 dbSNP
rs536830867 1085 dbSNP
rs1234419891 1090 dbSNP
rs1027076322 1097 dbSNP
rs567902186 1098 dbSNP
rs1340668706 1102 dbSNP
rs1051813474 1103 dbSNP
rs969429879 1104 dbSNP
rs1480701684 1106 dbSNP
rs34095937 1111 dbSNP
rs1178404972 1114 dbSNP
rs1025426296 1115 dbSNP
rs141945923 1120 dbSNP
rs1188000613 1127 dbSNP
rs534449608 1131 dbSNP
rs956990102 1132 dbSNP
rs1031204865 1133 dbSNP
rs1463618877 1138 dbSNP
rs571993975 1147 dbSNP
rs1378732933 1150 dbSNP
rs957995988 1156 dbSNP
rs1292069345 1171 dbSNP
rs1317423477 1174 dbSNP
rs1000995385 1175 dbSNP
rs1187452876 1179 dbSNP
rs4910446 1183 dbSNP
rs7358313 1184 dbSNP
rs1206042267 1185 dbSNP
rs1253687652 1187 dbSNP
rs1278184754 1189 dbSNP
rs1441906173 1190 dbSNP
rs996298444 1203 dbSNP
rs1244572040 1217 dbSNP
rs1351034106 1218 dbSNP
rs901579047 1220 dbSNP
rs1328512528 1221 dbSNP
rs1390734720 1226 dbSNP
rs1040485695 1229 dbSNP
rs1460278092 1234 dbSNP
rs186066508 1235 dbSNP
rs1358724582 1236 dbSNP
rs1466607321 1237 dbSNP
rs907803132 1238 dbSNP
rs1402696866 1241 dbSNP
rs1048970941 1246 dbSNP
rs1406029777 1248 dbSNP
rs1175319366 1251 dbSNP
rs1469430386 1263 dbSNP
rs1253319394 1264 dbSNP
rs930482290 1266 dbSNP
rs927090984 1268 dbSNP
rs1467044347 1270 dbSNP
rs1272021472 1276 dbSNP
rs1215842883 1278 dbSNP
rs1033338611 1279 dbSNP
rs1318405214 1280 dbSNP
rs1281681559 1281 dbSNP
rs1223646018 1282 dbSNP
rs1368758321 1283 dbSNP
rs1364716432 1287 dbSNP
rs979948757 1288 dbSNP
rs969901149 1292 dbSNP
rs918005419 1295 dbSNP
rs995551771 1308 dbSNP
rs899431549 1311 dbSNP
rs1439372780 1315 dbSNP
rs1223555237 1316 dbSNP
rs1264650527 1319 dbSNP
rs771036301 1322 dbSNP
rs548853158 1324 dbSNP
rs992600665 1327 dbSNP
rs1321352245 1346 dbSNP
rs180822379 1352 dbSNP
rs559873968 1359 dbSNP
rs1455396045 1363 dbSNP
rs1480827751 1364 dbSNP
rs1178633203 1368 dbSNP
rs1343719278 1374 dbSNP
rs770126553 1377 dbSNP
rs1456860086 1378 dbSNP
rs1158658244 1384 dbSNP
rs1031216115 1388 dbSNP
rs1415195605 1392 dbSNP
rs1347371861 1396 dbSNP
rs1434733698 1402 dbSNP
rs540041104 1406 dbSNP
rs189704456 1408 dbSNP
rs968198578 1410 dbSNP
rs1051886530 1412 dbSNP
rs1227472217 1413 dbSNP
rs933399138 1419 dbSNP
rs1029602970 1426 dbSNP
rs1284503437 1438 dbSNP
rs1318555693 1444 dbSNP
rs1219071038 1445 dbSNP
rs996339565 1449 dbSNP
rs1246086698 1462 dbSNP
rs901625251 1466 dbSNP
rs186501238 1471 dbSNP
rs921984180 1477 dbSNP
rs1452546654 1481 dbSNP
rs1472295988 1489 dbSNP
rs181804673 1491 dbSNP
rs936630170 1494 dbSNP
rs1164457849 1495 dbSNP
rs1366749174 1497 dbSNP
rs1407222008 1498 dbSNP
rs1306712093 1503 dbSNP
rs1186657463 1508 dbSNP
rs545367419 1509 dbSNP
rs1279813210 1525 dbSNP
rs1375017742 1542 dbSNP
rs1226424558 1545 dbSNP
rs1004555988 1546 dbSNP
rs1288815240 1549 dbSNP
rs1239797085 1551 dbSNP
rs1224719257 1554 dbSNP
rs1482791835 1555 dbSNP
rs778126487 1555 dbSNP
rs1182565151 1560 dbSNP
rs1234832367 1564 dbSNP
rs1471899470 1564 dbSNP
rs1181643611 1571 dbSNP
rs1386318596 1577 dbSNP
rs1290344411 1581 dbSNP
rs376119226 1586 dbSNP
rs1426930587 1590 dbSNP
rs1167318385 1592 dbSNP
rs1370453425 1592 dbSNP
rs1408895974 1602 dbSNP
rs1328891833 1606 dbSNP
rs1355936584 1610 dbSNP
rs966556525 1620 dbSNP
rs1282955581 1624 dbSNP
rs1283234239 1624 dbSNP
rs1383334536 1641 dbSNP
rs576384661 1646 dbSNP
rs1049021037 1651 dbSNP
rs917731474 1653 dbSNP
rs930577213 1659 dbSNP
rs1295351793 1661 dbSNP
rs927215453 1665 dbSNP
rs1196469147 1671 dbSNP
rs1044659221 1673 dbSNP
rs531309086 1676 dbSNP
rs556614895 1676 dbSNP
rs1446866640 1680 dbSNP
rs189239505 1680 dbSNP
rs973765778 1683 dbSNP
rs1475996100 1686 dbSNP
rs949905840 1691 dbSNP
rs1298981450 1693 dbSNP
rs755573123 1701 dbSNP
rs918002483 1707 dbSNP
rs1005133556 1718 dbSNP
rs1406301579 1719 dbSNP
rs1359968332 1728 dbSNP
rs1454394338 1732 dbSNP
rs1318226833 1743 dbSNP
rs1288310173 1750 dbSNP
rs1325790968 1751 dbSNP
rs1228147597 1762 dbSNP
rs1449069332 1767 dbSNP
rs992164229 1775 dbSNP
rs1343019546 1779 dbSNP
rs1218690314 1797 dbSNP
rs956721747 1799 dbSNP
rs923912798 1803 dbSNP
rs771353271 1811 dbSNP
rs1377470602 1813 dbSNP
rs1314545341 1815 dbSNP
rs1432615333 1816 dbSNP
rs1196032053 1818 dbSNP
rs1394475944 1819 dbSNP
rs1476772241 1819 dbSNP
rs1171067155 1821 dbSNP
rs1429566803 1825 dbSNP
rs1470713187 1827 dbSNP
rs1430176730 1828 dbSNP
rs543105187 1832 dbSNP
rs1384044912 1845 dbSNP
rs1382549992 1846 dbSNP
rs7931491 1850 dbSNP
rs1404435695 1851 dbSNP
rs1030489842 1858 dbSNP
rs1337442284 1872 dbSNP
rs1325936641 1875 dbSNP
rs1226866945 1878 dbSNP
rs1267732568 1883 dbSNP
rs149594995 1894 dbSNP
rs35079889 1894 dbSNP
rs777177030 1897 dbSNP
rs975325732 1898 dbSNP
rs1485819627 1900 dbSNP
rs966200807 1906 dbSNP
rs1259155428 1909 dbSNP
rs1207219216 1910 dbSNP
rs1265904223 1911 dbSNP
rs779975275 1913 dbSNP
rs1209257999 1916 dbSNP
rs1198070019 1917 dbSNP
rs1019131069 1918 dbSNP
rs900589805 1920 dbSNP
rs1156566694 1923 dbSNP
rs1362827632 1924 dbSNP
rs1454150100 1934 dbSNP
rs1160035870 1937 dbSNP
rs1004606611 1948 dbSNP
rs936721418 1953 dbSNP
rs562324821 1965 dbSNP
rs1347532223 1971 dbSNP
rs771747053 1971 dbSNP
rs756257146 1978 dbSNP
rs1336523989 1980 dbSNP
rs534411863 2002 dbSNP
rs571955109 2005 dbSNP
rs945282996 2006 dbSNP
rs1296763866 2007 dbSNP
rs1294994878 2012 dbSNP
rs369885344 2018 dbSNP
rs917805037 2020 dbSNP
rs747780434 2021 dbSNP
rs1179338040 2022 dbSNP
rs1357663851 2027 dbSNP
rs992022288 2032 dbSNP
rs1044284739 2033 dbSNP
rs1414327235 2041 dbSNP
rs1366572084 2047 dbSNP
rs949926172 2048 dbSNP
rs1164192890 2049 dbSNP
rs895625879 2052 dbSNP
rs537845969 2055 dbSNP
rs1374641879 2058 dbSNP
rs778766544 2059 dbSNP
rs568802013 2060 dbSNP
rs548971421 2061 dbSNP
rs1297621024 2064 dbSNP
rs185282218 2065 dbSNP
rs1397487243 2078 dbSNP
rs1056485054 2079 dbSNP
rs1310829871 2082 dbSNP
rs1382562956 2083 dbSNP
rs935444744 2091 dbSNP
rs924007555 2097 dbSNP
rs974219361 2104 dbSNP
rs1340599390 2107 dbSNP
rs1201840687 2109 dbSNP
rs962407638 2110 dbSNP
rs1480672090 2111 dbSNP
rs979440381 2113 dbSNP
rs1240864386 2119 dbSNP
rs946706565 2122 dbSNP
rs1443826289 2125 dbSNP
rs1183932374 2126 dbSNP
rs1387025892 2126 dbSNP
rs1447508253 2129 dbSNP
rs754816966 2138 dbSNP
rs922182251 2144 dbSNP
rs1463493573 2148 dbSNP
rs1463568728 2157 dbSNP
rs975001595 2159 dbSNP
rs966626770 2161 dbSNP
rs1019153467 2178 dbSNP
rs983601975 2200 dbSNP
rs950487805 2205 dbSNP
rs1027396755 2217 dbSNP
rs181398015 2228 dbSNP
rs1363650979 2237 dbSNP
rs1419301292 2239 dbSNP
rs1185359857 2246 dbSNP
rs1214569923 2253 dbSNP
rs753581368 2262 dbSNP
rs1474646504 2263 dbSNP
rs1307624773 2271 dbSNP
rs1228939496 2277 dbSNP
rs1023322122 2282 dbSNP
rs1014140637 2284 dbSNP
rs895707404 2285 dbSNP
rs1197891188 2286 dbSNP
rs189783617 2288 dbSNP
rs1185908535 2292 dbSNP
rs1262302389 2301 dbSNP
rs934490957 2306 dbSNP
rs532991769 2310 dbSNP
rs1173981953 2314 dbSNP
rs1428876699 2319 dbSNP
rs779375524 2320 dbSNP
rs564381791 2321 dbSNP
rs1043754022 2332 dbSNP
rs1337220468 2333 dbSNP
rs1386982770 2336 dbSNP
rs1291726162 2352 dbSNP
rs11042260 2355 dbSNP
rs530845627 2358 dbSNP
rs921929631 2359 dbSNP
rs1336469450 2361 dbSNP
rs1307568271 2369 dbSNP
rs1000887619 2371 dbSNP
rs1280728346 2372 dbSNP
rs1322208858 2372 dbSNP
rs903893994 2372 dbSNP
rs1042384655 2373 dbSNP
rs1349452988 2377 dbSNP
rs975136550 2386 dbSNP
rs571940046 2387 dbSNP
rs1214758353 2392 dbSNP
rs1261263306 2394 dbSNP
rs912147208 2401 dbSNP
rs1330424949 2402 dbSNP
rs145728978 2408 dbSNP
rs1056749807 2415 dbSNP
rs1480798271 2415 dbSNP
rs184612201 2417 dbSNP
rs920344215 2421 dbSNP
rs973153291 2424 dbSNP
rs937892338 2435 dbSNP
rs970141215 2437 dbSNP
rs926443708 2441 dbSNP
rs1303058423 2453 dbSNP
rs1344372127 2461 dbSNP
rs538610261 2465 dbSNP
rs1284838259 2466 dbSNP
rs1370662493 2475 dbSNP
rs758526814 2477 dbSNP
rs1014317176 2482 dbSNP
rs959985558 2493 dbSNP
rs1031540997 2497 dbSNP
rs1290919366 2506 dbSNP
rs1490546463 2516 dbSNP
rs752907471 2518 dbSNP
rs998650283 2522 dbSNP
rs908261281 2524 dbSNP
rs147084304 2526 dbSNP
rs1177988236 2533 dbSNP
rs1410688390 2535 dbSNP
rs954992301 2541 dbSNP
rs540808147 2555 dbSNP
rs1366689084 2570 dbSNP
rs976740398 2577 dbSNP
rs964931268 2584 dbSNP
rs1043805236 2589 dbSNP
rs1011022942 2591 dbSNP
rs1279758022 2592 dbSNP
rs1351427277 2593 dbSNP
rs15248 2594 dbSNP
rs1262577930 2595 dbSNP
rs1243461417 2598 dbSNP
rs900565895 2601 dbSNP
rs759934796 2602 dbSNP
rs578145238 2616 dbSNP
rs1271047968 2629 dbSNP
rs1437297652 2630 dbSNP
rs1308514606 2632 dbSNP
rs1205546742 2634 dbSNP
rs1234784469 2645 dbSNP
rs912155484 2647 dbSNP
rs1441328234 2652 dbSNP
rs1009530890 2653 dbSNP
rs896471045 2657 dbSNP
rs1166659568 2661 dbSNP
rs1416845687 2668 dbSNP
rs1408842404 2676 dbSNP
rs558419724 2692 dbSNP
rs1329177487 2695 dbSNP
rs1056421027 2696 dbSNP
rs1323422358 2697 dbSNP
rs1335775595 2701 dbSNP
rs1385890671 2708 dbSNP
rs9215 2710 dbSNP
rs929477992 2714 dbSNP
rs74353708 2715 dbSNP
rs1268319979 2722 dbSNP
rs1451069079 2727 dbSNP
rs1363703933 2732 dbSNP
rs1215195102 2738 dbSNP
rs1275408481 2739 dbSNP
rs1321600847 2740 dbSNP
rs1203438193 2758 dbSNP
rs1174859802 2761 dbSNP
rs1244205056 2764 dbSNP
rs554915580 2765 dbSNP
rs1191730258 2770 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 440026.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gcucacacucuAGUGUGGAGGg 5'
                     |: ||||||| 
Target 5' ------cccacUUCCACCUCC- 3'
1 - 15
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HCT116
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in ERX177630. RNA binding protein: AGO2. Condition:KO_V_AGO_CLIP_4_8 ...

- Krell J; Stebbing J; Carissimi C; Dabrowska et al., 2016, Genome research.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            | ||  || || ||||||| 
Target 5' ucACUGCAAGCUC-CACCUCCu 3'
8 - 28
Article - Krell J; Stebbing J; Carissimi C; Dabrowska et al.
- Genome research, 2016
DNA damage activates TP53-regulated surveillance mechanisms that are crucial in suppressing tumorigenesis. TP53 orchestrates these responses directly by transcriptionally modulating genes, including microRNAs (miRNAs), and by regulating miRNA biogenesis through interacting with the DROSHA complex. However, whether the association between miRNAs and AGO2 is regulated following DNA damage is not yet known. Here, we show that, following DNA damage, TP53 interacts with AGO2 to induce or reduce AGO2's association of a subset of miRNAs, including multiple let-7 family members. Furthermore, we show that specific mutations in TP53 decrease rather than increase the association of let-7 family miRNAs, reducing their activity without preventing TP53 from interacting with AGO2. This is consistent with the oncogenic properties of these mutants. Using AGO2 RIP-seq and PAR-CLIP-seq, we show that the DNA damage-induced increase in binding of let-7 family members to the RISC complex is functional. We unambiguously determine the global miRNA-mRNA interaction networks involved in the DNA damage response, validating them through the identification of miRNA-target chimeras formed by endogenous ligation reactions. We find that the target complementary region of the let-7 seed tends to have highly fixed positions and more variable ones. Additionally, we observe that miRNAs, whose cellular abundance or differential association with AGO2 is regulated by TP53, are involved in an intricate network of regulatory feedback and feedforward circuits. TP53-mediated regulation of AGO2-miRNA interaction represents a new mechanism of miRNA regulation in carcinogenesis.
LinkOut: [PMID: 26701625]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_015012 | 3UTR | CCACCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_015012 | 3UTR | UUGAGACGGAGUCUAGCUCUGCCGCCCAGGCUGGAGUGCAGUGGCGCGAUCUCCACUCACUGCAAGCUCCACCUCCUGGGUUCACGCCAUUCUCCUGUCUCAGCCUCCUGAGUAGCUGGGACUACAGGCGCCCGCCACCAUGCCCAGCUAAUUUUUUUGUAUUUUUAGUAGAGACGGGGUUUCACCGUGUUAGCCAGGAUGGUCUCGAUCUCCUGACCUCGUGAUCUGCCCGCCUUGGCCUCCCAAAGUGCUGGGAUUACAGGCGUGAGCCACCGCGCCUGGCCCAUUUUCUUCCUCUUUUGAGGUAAUGGAUUUGUUUGGAGAUGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_015012 | 3UTR | CACCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_015012 | 3UTR | CCACCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_015012 | 3UTR | CCUCAGGCUAUAUGCCCACUUCCACCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_015012 | 3UTR | CACCUCCCAAAGUGCUGGGAUUACAGGCAUGAGCCACUGUGCCCAGCCUGGUAUUGAUAAUUUAUAUUCAGAUAAUUUGUUAUGGCUCUUUAAUAUCCCACAAGGGGCUCUAAAAAGCAAACAUUCAAGAGUAUGUAGUUUUUAGACAUUAAGUUAAUUAUUUUAAACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000528080.1 | 3UTR | CCCACUUCCACCUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

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